Q06219 | Nuclear receptor subfamily 4 group A member 2   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D Q06219 31 SSDFLTPEFVKFSMDL                  CCCCCCCCCCCCCCCC c1a-4 multi-selected 0.736 0.66 0.334 DISO 0.0
2 fp_D Q06219 32 SDFLTPEFVKFSMDL                 CCCCCCCCCCCCCCC c1b-AT-4 multi 0.731 0.662 0.336 DISO 0.0
3 fp_D Q06219 32 SDFLTPEFVKFSMDLTN                   CCCCCCCCCCCCCCCCC c1c-AT-4 multi 0.746 0.659 0.344 DISO 0.0
4 fp_D Q06219 86 QQSSIKVEDIQMHN                CCCCCCCCCCCCCC c2-4 uniq 0.557 0.616 0.541 DISO 0.0
5 fp_D Q06219 164 EQRKTPVSRLSLFS                CCCCCCCCCCCCCC c2-AT-4 multi-selected 0.966 0.576 0.519 DISO 0.0
6 fp_D Q06219 166 RKTPVSRLSLFSFKQ                 CCCCCCCCCCCCCCC c1b-4 multi-selected 0.973 0.578 0.511 DISO 0.0
7 fp_beta_D Q06219 287 FKRTVQKNAKYVCLAN                  EEEEEECCCEEECCCC c1a-AT-4 uniq 0.027 0.098 0.2 boundary MID|NR_DBD_NGFI-B; 0.571
8 fp_D Q06219 322 KCLAVGMVKEVVRTDS                  HHHCCCCCCCCCCCCC c1aR-4 uniq 0.341 0.243 0.234 DISO boundary|NR_DBD_NGFI-B; 0.0
9 fp_D Q06219 402 HIQQFYDLLTGSMEIIR                   HHHHHHHHHHHHHHHHH c1c-5 multi-selected 0.014 0.049 0.159 boundary MID|NR_LBD_Nurr1; 0.0
10 fp_D Q06219 405 QFYDLLTGSMEIIR                HHHHHHHHHHHHHH c2-AT-5 multi 0.011 0.043 0.133 boundary MID|NR_LBD_Nurr1; 0.0
11 fp_D Q06219 413 SMEIIRGWAEKIPG                HHHHHHHHHHCCCC c3-AT uniq 0.01 0.048 0.141 boundary MID|NR_LBD_Nurr1; 0.0
12 fp_O Q06219 426 GFADLPKADQDLLFES                  CCCCCCHHHHHHHHHH c1d-AT-5 uniq 0.019 0.027 0.139 ORD MID|NR_LBD_Nurr1; 0.0
13 cand_O Q06219 434 DQDLLFESAFLELFVLR           ++*++*+ HHHHHHHHHHHHHHHHH c1c-AT-4 multi 0.015 0.01 0.046 ORD MID|NR_LBD_Nurr1; 0.0
14 fp_O Q06219 435 QDLLFESAFLELFVLRL          ++*++*+* HHHHHHHHHHHHHHHHH c1cR-4 multi 0.014 0.01 0.044 ORD MID|NR_LBD_Nurr1; 0.0
15 cand_O Q06219 435 QDLLFESAFLELFVLRL          ++*++*+* HHHHHHHHHHHHHHHHH c1c-4 multi-selected 0.014 0.01 0.044 ORD MID|NR_LBD_Nurr1; 0.0
16 cand_O Q06219 435 QDLLFESAFLELFVLR          ++*++*+ HHHHHHHHHHHHHHHH c1a-4 multi-selected 0.014 0.01 0.043 ORD MID|NR_LBD_Nurr1; 0.0
17 cand_O Q06219 435 QDLLFESAFLELFVLR          ++*++*+ HHHHHHHHHHHHHHHH c1d-AT-4 multi 0.014 0.01 0.043 ORD MID|NR_LBD_Nurr1; 0.0
18 cand_O Q06219 438 LFESAFLELFVLRLAY       ++*++*+*+  HHHHHHHHHHHHHHHH c1a-AT-5 multi 0.013 0.009 0.032 ORD MID|NR_LBD_Nurr1; 0.0
19 cand_O Q06219 438 LFESAFLELFVLRL       ++*++*+* HHHHHHHHHHHHHH c2-AT-5 multi 0.013 0.008 0.033 ORD MID|NR_LBD_Nurr1; 0.0
20 cand_O Q06219 439 FESAFLELFVLRLAY      ++*++*+*+  HHHHHHHHHHHHHHH c1b-4 multi 0.012 0.009 0.031 ORD MID|NR_LBD_Nurr1; 0.0
21 cand_O Q06219 440 ESAFLELFVLRLAY     ++*++*+*+  HHHHHHHHHHHHHH c2-4 multi-selected 0.011 0.008 0.03 ORD MID|NR_LBD_Nurr1; 0.0
22 fp_O Q06219 475 CVRGFGEWIDSIVEFSS                   HHHHHHHHHHHHHHHHH c1c-5 multi-selected 0.014 0.016 0.044 ORD MID|NR_LBD_Nurr1; 0.0
23 fp_O Q06219 475 CVRGFGEWIDSIVE                HHHHHHHHHHHHHH c3-4 multi-selected 0.013 0.016 0.04 ORD MID|NR_LBD_Nurr1; 0.0
24 fp_O Q06219 485 SIVEFSSNLQNMNIDI                  HHHHHHHHCCCCCCCH c1a-5 uniq 0.041 0.024 0.051 ORD MID|NR_LBD_Nurr1; 0.0
25 fp_O Q06219 492 NLQNMNIDISAFSC                HCCCCCCCHHHHHH c3-4 uniq 0.067 0.026 0.034 ORD MID|NR_LBD_Nurr1; 0.0
26 fp_O Q06219 498 IDISAFSCIAALAMVT                  CCHHHHHHHHHHHHHC c1a-AT-4 multi-selected 0.059 0.018 0.038 ORD MID|NR_LBD_Nurr1; 0.0
27 fp_O Q06219 499 DISAFSCIAALAMVT                 CHHHHHHHHHHHHHC c1b-5 multi 0.057 0.017 0.038 ORD MID|NR_LBD_Nurr1; 0.0
28 fp_D Q06219 527 LQNKIVNCLKDHVTFNN                   HHHHHHHHHHHHHHHCC c1c-4 multi-selected 0.041 0.044 0.144 boundary MID|NR_LBD_Nurr1; 0.0
29 fp_D Q06219 528 QNKIVNCLKDHVTFNN                  HHHHHHHHHHHHHHCC c1d-4 multi 0.042 0.045 0.14 boundary MID|NR_LBD_Nurr1; 0.0
30 cand_D Q06219 563 RTLCTQGLQRIFYLKL        *++*++*+* HHHHHHHHHHHHHHHH c1d-AT-4 multi 0.15 0.039 0.044 boundary boundary|NR_LBD_Nurr1; 0.0
31 cand_D Q06219 566 CTQGLQRIFYLKLED     *++*++*+*   HHHHHHHHHHHHHCC c1b-4 multi-selected 0.163 0.036 0.041 boundary boundary|NR_LBD_Nurr1; 0.0
32 fp_D Q06219 582 VPPPAIIDKLFLDT                CCCHHHHHHHHHCC c2-AT-4 uniq 0.101 0.072 0.044 __ boundary|NR_LBD_Nurr1; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment