Q0PLR1 | M1 protein   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 cand_D Q0PLR1 1 XMSLFGDTIAYLLSLIE    +++++++++*+*   CCCCHHHHHHHHHHCCC c1c-5-Nt multi-selected 0.297 0.26 0.048 boundary boundary|Flu_M1; 0.0
2 cand_D Q0PLR1 1 XMSLFGDTIAYLLS    +++++++++*+ CCCCHHHHHHHHHH c3-4-Nt multi-selected 0.344 0.277 0.034 boundary boundary|Flu_M1; 0.0
3 cand_D Q0PLR1 3 LFGDTIAYLLSLIE +++++++++*+*   CCHHHHHHHHHHCC c3-AT multi 0.258 0.22 0.048 boundary boundary|Flu_M1; 0.0
4 fp_D Q0PLR1 95 GLILAERKMRRCVSFHE                   HHHHHHHHHHHHCCCCH c1c-AT-5 uniq 0.029 0.133 0.215 boundary MID|Flu_M1; 0.0
5 cand_D Q0PLR1 119 HESSALLYCLMVMY      +++++++*+ CCCHHHHHHHHHHH c2-AT-4 multi 0.015 0.066 0.073 boundary MID|Flu_M1; 0.0
6 cand_D Q0PLR1 120 ESSALLYCLMVMYLNP     +++++++*+*   CCHHHHHHHHHHHCCC c1a-4 multi-selected 0.013 0.055 0.068 boundary MID|Flu_M1; 0.0
7 cand_D Q0PLR1 121 SSALLYCLMVMYLNP    +++++++*+*   CHHHHHHHHHHHCCC c1b-4 multi 0.012 0.049 0.066 boundary MID|Flu_M1; 0.0
8 fp_D Q0PLR1 166 ARSSVPGVRREMQMVS                  HHCCCCCCCCCHHHHH c1d-4 multi 0.111 0.537 0.57 DISO boundary|Flu_M1; boundary|Flu_M1_C superfamily; 0.0
9 fp_D Q0PLR1 169 SVPGVRREMQMVSA                CCCCCCCCHHHHHH c3-4 multi-selected 0.094 0.493 0.535 DISO boundary|Flu_M1; boundary|Flu_M1_C superfamily; 0.0
10 fp_D Q0PLR1 197 DVQRLAEELQNNIGVLR                   HHHHHHHHHHHHHHHHH c1c-5 multi-selected 0.078 0.224 0.416 DISO MID|Flu_M1_C superfamily; 0.0
11 fp_D Q0PLR1 198 VQRLAEELQNNIGVLR                  HHHHHHHHHHHHHHHH c1d-AT-4 multi 0.075 0.218 0.406 DISO MID|Flu_M1_C superfamily; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment