Q12824 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D Q12824 1 XXMMMMALSKTFGQKP                  CCCCCCHHHCCCCCCC c1aR-4-Nt uniq 0.447 0.535 0.235 boundary 0.0
2 fp_D Q12824 24 EFYMIGSEVGNYLRMFR                   EEEEEHHHHHHHHCCCC c1c-5 uniq 0.019 0.038 0.178 boundary 0.125
3 fp_beta_D Q12824 181 SQPEVLVPIRLDMEIDG                   CCCCEEEEEEEEEECCC c1c-4 multi-selected 0.029 0.054 0.363 boundary boundary|SNF5; 1.0
4 fp_beta_D Q12824 182 QPEVLVPIRLDMEIDG                  CCCEEEEEEEEEECCC c1d-4 multi 0.022 0.038 0.36 boundary boundary|SNF5; 1.0
5 fp_D Q12824 214 TPEMFSEILCDDLDLNP                   CHHHHHHHHHHHCCCCC c1c-4 uniq 0.024 0.03 0.19 boundary MID|SNF5; 0.0
6 fp_D Q12824 230 PLTFVPAIASAIRQ                CCCCHHHHHHHHHH c3-AT uniq 0.052 0.093 0.193 boundary MID|SNF5; 0.0
7 cand_beta_D Q12824 262 VIIKLNIHVGNISLVD     +++++++++++  EEEEEEEEECCEEEEE c1a-5 multi-selected 0.011 0.014 0.135 boundary MID|SNF5; 0.714
8 cand_beta_D Q12824 264 IKLNIHVGNISLVD   +++++++++++  EEEEEEECCEEEEE c2-4 multi 0.01 0.013 0.129 boundary MID|SNF5; 0.714
9 fp_O Q12824 289 SPEKFALKLCSELGLGG                   CHHHHHHHHHHHHCCCC c1c-4 multi-selected 0.015 0.035 0.227 ORD MID|SNF5; 0.0
10 fp_O Q12824 290 PEKFALKLCSELGLGG                  HHHHHHHHHHHHCCCC c1d-AT-4 multi 0.015 0.033 0.223 ORD MID|SNF5; 0.0
11 fp_D Q12824 329 SENPLPTVEIAIRN                CCCCCCCCCCCCCC c2-AT-4 uniq 0.101 0.142 0.366 boundary boundary|SNF5; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment