Q16665 | Hypoxia-inducible factor 1-alpha   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D Q16665 50 VSSHLDKASVMRLTI                 CCCCCHHHHHHHHHH c1b-AT-4 multi 0.633 0.118 0.28 DISO boundary|HLH; 0.0
2 fp_D Q16665 53 HLDKASVMRLTISY                CCHHHHHHHHHHHH c2-AT-5 multi 0.597 0.104 0.233 DISO boundary|HLH; 0.0
3 fp_D Q16665 55 DKASVMRLTISYLRVRK                   HHHHHHHHHHHHHHHCC c1c-AT-4 multi 0.492 0.105 0.185 DISO boundary|HLH; 0.0
4 fp_D Q16665 56 KASVMRLTISYLRVRK                  HHHHHHHHHHHHHHCC c1a-4 multi-selected 0.479 0.105 0.172 DISO boundary|HLH; 0.0
5 fp_D Q16665 56 KASVMRLTISYLRVRK                  HHHHHHHHHHHHHHCC c1d-AT-4 multi 0.479 0.105 0.172 DISO boundary|HLH; 0.0
6 fp_D Q16665 58 SVMRLTISYLRVRK                HHHHHHHHHHHHCC c2-5 multi-selected 0.448 0.105 0.157 DISO boundary|HLH; 0.0
7 fp_D Q16665 68 RVRKLLDAGDLDIED                 HHCCCCCCCCCCCCC c1b-AT-5 multi 0.467 0.264 0.203 DISO boundary|HLH; boundary|PAS; 0.0
8 fp_D Q16665 69 VRKLLDAGDLDIED                HCCCCCCCCCCCCC c2-AT-4 multi-selected 0.479 0.276 0.209 DISO boundary|HLH; boundary|PAS; 0.0
9 fp_D Q16665 80 IEDDMKAQMNCFYLKA                  CCCHHHHHHHHHHHHH c1a-4 multi-selected 0.352 0.172 0.14 DISO boundary|HLH; boundary|PAS; 0.0
10 fp_D Q16665 82 DDMKAQMNCFYLKA                CHHHHHHHHHHHHH c2-AT-4 multi 0.319 0.145 0.121 DISO boundary|HLH; boundary|PAS; 0.0
11 fp_D Q16665 87 QMNCFYLKALDGFVMVL                   HHHHHHHHHCCCCEEEE c1c-AT-5 multi 0.162 0.045 0.076 boundary boundary|HLH; boundary|PAS; 0.0
12 fp_D Q16665 89 NCFYLKALDGFVMVL                 HHHHHHHCCCCEEEE c1b-4 multi 0.143 0.033 0.067 boundary boundary|HLH; boundary|PAS; 0.0
13 fp_D Q16665 89 NCFYLKALDGFVMVLT                  HHHHHHHCCCCEEEEE c1aR-5 multi-selected 0.143 0.032 0.07 boundary boundary|HLH; boundary|PAS; 0.0
14 fp_D Q16665 89 NCFYLKALDGFVMVLT                  HHHHHHHCCCCEEEEE c1d-4 multi 0.143 0.032 0.07 boundary boundary|HLH; boundary|PAS; 0.0
15 fp_D Q16665 92 YLKALDGFVMVLTD                HHHHCCCCEEEEEC c3-4 multi-selected 0.119 0.023 0.065 boundary boundary|HLH; boundary|PAS; 0.286
16 fp_D Q16665 108 DMIYISDNVNKYMGLTQ                   CEEEECCCHHHCCCCCC c1c-5 uniq 0.122 0.031 0.172 boundary boundary|PAS; 0.125
17 fp_D Q16665 116 VNKYMGLTQFELTG                HHHCCCCCCCCCCC c2-4 uniq 0.084 0.049 0.154 boundary boundary|PAS; 0.0
18 fp_D Q16665 124 QFELTGHSVFDFTH                CCCCCCCCCCCCCC c3-AT uniq 0.229 0.077 0.193 boundary boundary|PAS; 0.0
19 fp_beta_D Q16665 187 ATWKVLHCTGHIHVYD                  CCEEEEEEEEEEEECC c1a-AT-4 multi-selected 0.054 0.031 0.175 boundary 1.0
20 fp_beta_D Q16665 188 TWKVLHCTGHIHVYD                 CEEEEEEEEEEEECC c1b-AT-4 multi 0.053 0.028 0.171 boundary 1.0
21 fp_beta_D Q16665 334 CIVCVNYVVSGIIQ                EEEEEEEEEECCCC c3-4 multi-selected 0.067 0.092 0.073 boundary boundary|PAS_3; 1.0
22 fp_D Q16665 338 VNYVVSGIIQHDLIFSL                   EEEEEECCCCCCCCCCC c1c-4 multi-selected 0.261 0.261 0.072 boundary boundary|PAS_3; 0.25
23 fp_D Q16665 367 SDMKMTQLFTKVESED                  CCCCCCCCCCCCCCCC c1aR-4 uniq 0.969 0.925 0.396 DISO boundary|PAS_3; 0.0
24 fp_D Q16665 400 LAPAAGDTIISLDFGS                  CCCCCCCCEECCCCCC c1a-AT-4 uniq 0.812 0.79 0.429 DISO 0.286
25 fp_D Q16665 462 LRSSADPALNQEVALKL                   CCCCCCCHHHHHHCCCC c1c-AT-4 uniq 0.971 0.935 0.73 DISO 0.0
26 fp_D Q16665 519 YCFYVDSDMVNEFKLEL                   CCCCCCCCCCCCCCHHH c1c-4 multi-selected 0.818 0.836 0.386 DISO 0.0
27 fp_D Q16665 519 YCFYVDSDMVNEFKLEL                   CCCCCCCCCCCCCCHHH c1cR-4 multi 0.818 0.836 0.386 DISO 0.0
28 fp_D Q16665 529 NEFKLELVEKLFAEDT                  CCCCHHHHHHHCCCCC c1aR-4 uniq 0.751 0.8 0.418 DISO 0.0
29 fp_D Q16665 555 TDLDLEMLAPYIPMDD                  CCCCCCCCCCCCCCCC c1aR-4 uniq 0.789 0.889 0.564 DISO small|HIF-1; 0.0
30 fp_D Q16665 624 LKTVTKDRMEDIKILI ................ CCCCCCCCCCCCCCCC c1a-AT-4 uniq 0.983 0.903 0.578 DISO 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment