Q336P7 | NMD3 family protein, expressed (Os10g0573900 protein)   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D Q336P7 20 TVGTVLCCICGVAMQP                  CCCEEECCCCCCCCCC c1a-5 multi-selected 0.049 0.101 0.054 boundary boundary|NMD3; 0.286
2 fp_D Q336P7 21 VGTVLCCICGVAMQP                 CCEEECCCCCCCCCC c1b-4 multi 0.029 0.093 0.054 boundary boundary|NMD3; 0.143
3 fp_D Q336P7 38 ANMCARCIRARVDITE                  CCCCHHHHCCCCCCCC c1d-AT-4 uniq 0.014 0.057 0.17 boundary boundary|NMD3; 0.0
4 fp_D Q336P7 84 SPELMQILLRRLNRPLAR                    CHHHHHHHHHHHCCCCCC c4-4 multi 0.095 0.054 0.193 boundary MID|NMD3; 0.0
5 fp_D Q336P7 88 MQILLRRLNRPLARLR                  HHHHHHHHCCCCCCCC c1aR-5 multi 0.119 0.057 0.172 boundary MID|NMD3; 0.0
6 fp_D Q336P7 91 LLRRLNRPLARLRVSL                  HHHHHCCCCCCCCEEC c1a-5 multi-selected 0.154 0.059 0.132 boundary MID|NMD3; 0.0
7 fp_D Q336P7 100 ARLRVSLSAAEFVFSE                  CCCCEECCCCEEEEEC c1a-AT-4 multi-selected 0.163 0.046 0.121 boundary MID|NMD3; 0.429
8 fp_D Q336P7 102 LRVSLSAAEFVFSE                CCEECCCCEEEEEC c2-AT-4 multi 0.156 0.039 0.124 boundary MID|NMD3; 0.429
9 fp_beta_D Q336P7 123 LKLRLRREVFNAVVLEQ                   EEEEEEEEEECCEEEEE c1c-4 uniq 0.021 0.026 0.137 __ MID|NMD3; 0.75
10 fp_D Q336P7 176 PHRRTFLYLEQLLLKH                  CCCCHHHHHHHHHHHH c1a-AT-4 multi 0.051 0.051 0.074 boundary MID|NMD3; 0.0
11 fp_D Q336P7 177 HRRTFLYLEQLLLKH                 CCCHHHHHHHHHHHH c1b-4 multi 0.045 0.047 0.073 boundary MID|NMD3; 0.0
12 fp_D Q336P7 178 RRTFLYLEQLLLKH                CCHHHHHHHHHHHH c2-4 multi-selected 0.041 0.043 0.072 boundary MID|NMD3; 0.0
13 fp_O Q336P7 199 RVAAAPGGLDFFFG                CCCCCCCEEEEEEC c3-AT uniq 0.015 0.04 0.073 ORD MID|NMD3; 0.429
14 fp_O Q336P7 269 LSPQVSRDLGGLGPIVLC                    ECHHHHHHCCCCCCEEEE c4-4 uniq 0.018 0.023 0.079 ORD boundary|NMD3; 0.0
15 fp_beta_O Q336P7 276 DLGGLGPIVLCIKVTN                  HCCCCCCEEEEEEECC c1a-5 multi-selected 0.015 0.019 0.04 ORD boundary|NMD3; 0.571
16 fp_beta_O Q336P7 276 DLGGLGPIVLCIKVTN                  HCCCCCCEEEEEEECC c1d-5 multi 0.015 0.019 0.04 ORD boundary|NMD3; 0.571
17 fp_beta_O Q336P7 281 GPIVLCIKVTNAIALLD                   CCEEEEEEECCEEEEEC c1c-4 multi 0.01 0.01 0.032 ORD boundary|NMD3; 0.75
18 fp_beta_O Q336P7 283 IVLCIKVTNAIALLD                 EEEEEEECCEEEEEC c1b-AT-5 multi 0.01 0.009 0.026 ORD boundary|NMD3; 0.714
19 fp_O Q336P7 292 AIALLDPLTLRVHH                EEEEECCCCCEEEE c3-AT multi 0.01 0.021 0.077 ORD boundary|NMD3; 0.286
20 fp_O Q336P7 295 LLDPLTLRVHHLEE                EECCCCCEEEEEEC c3-4 multi-selected 0.01 0.024 0.1 ORD 0.429
21 fp_D Q336P7 317 KAALTSKQLVEYIVLDI                   CCCCCCCCCCEEEEEEE c1c-AT-4 uniq 0.016 0.024 0.092 boundary 0.25
22 fp_D Q336P7 365 TMFTVRTHLGHLLNPGD                   CEEEEEECCCCCCCCCC c1cR-4 multi 0.01 0.021 0.218 boundary 0.375
23 fp_beta_D Q336P7 365 TMFTVRTHLGHLLN                CEEEEEECCCCCCC c3-4 multi-selected 0.01 0.019 0.235 boundary 0.571
24 fp_D Q336P7 490 PTVPIEELIEDLSLGD                  CCCCHHHHHHCCCCCC c1a-4 multi-selected 0.693 0.484 0.568 DISO 0.0
25 fp_D Q336P7 490 PTVPIEELIEDLSLGD                  CCCCHHHHHHCCCCCC c1d-4 multi 0.693 0.484 0.568 DISO 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment