Q6VGT3 | E4 orf 6   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_beta_D Q6VGT3 67 CSVGFTLIQEWVVPWD                  CCCCCEEECEECCCCC c1aR-4 uniq 0.011 0.034 0.027 boundary 0.714
2 cand_O Q6VGT3 79 VPWDMVLTREELVILR     +++++++*+*   CCCCCCCCHHHHHHHH c1d-AT-4 multi 0.01 0.019 0.026 ORD 0.0
3 cand_O Q6VGT3 82 DMVLTREELVILRK  +++++++*+*    CCCCCHHHHHHHHC c3-AT multi-selected 0.01 0.019 0.022 ORD 0.0
4 fp_O Q6VGT3 86 TREELVILRKCMHVCL ++++*+*          CHHHHHHHHCCCCCCC c1d-4 multi-selected 0.01 0.016 0.015 ORD 0.0
5 fp_O Q6VGT3 100 CLCCANIDIMTSMMIHG                   CCCCCEEECCCCEEEEC c1c-AT-5 multi-selected 0.01 0.028 0.012 ORD 0.375
6 fp_O Q6VGT3 102 CCANIDIMTSMMIHG                 CCCEEECCCCEEEEC c1b-4 multi 0.01 0.03 0.013 ORD 0.429
7 fp_beta_O Q6VGT3 169 MPKEVMFMSSVFMRG                 CCCEEEEEEEEEECC c1b-4 multi 0.01 0.008 0.021 ORD MID|Adeno_E4_34 superfamily; 1.0
8 fp_beta_O Q6VGT3 170 PKEVMFMSSVFMRG                CCEEEEEEEEEECC c2-4 multi-selected 0.01 0.007 0.022 ORD MID|Adeno_E4_34 superfamily; 1.0
9 fp_O Q6VGT3 207 GYSALHCGILNNIVVLC                   CCEEEEECCCCCEEEEE c1c-4 uniq 0.008 0.015 0.008 ORD MID|Adeno_E4_34 superfamily; 0.375
10 fp_O Q6VGT3 224 CSYCADLSEIRVRC                ECCCCCCHHHHHHH c2-AT-4 uniq 0.01 0.03 0.014 ORD MID|Adeno_E4_34 superfamily; 0.0
11 fp_D Q6VGT3 238 CARRTRRLMLRAVRIIA                   HHHHHHHHHHHHHHHHH c1c-AT-4 multi 0.028 0.019 0.055 boundary MID|Adeno_E4_34 superfamily; 0.0
12 fp_D Q6VGT3 241 RTRRLMLRAVRIIA                HHHHHHHHHHHHHH c2-4 multi-selected 0.032 0.02 0.057 boundary MID|Adeno_E4_34 superfamily; 0.0
13 fp_D Q6VGT3 249 AVRIIAEETTAMLY                HHHHHHHCCCCCCC c3-AT uniq 0.137 0.105 0.086 boundary MID|Adeno_E4_34 superfamily; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment