Q7TN99 | Cytoplasmic polyadenylation element-binding protein 3   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D Q7TN99 127 FFQGITPVNGTMLFQN                  CCCCCCCCCCCCCCCC c1d-5 uniq 0.973 0.93 0.618 DISO 0.0
2 fp_D Q7TN99 136 GTMLFQNFPHHVNPVF                  CCCCCCCCCCCCCCCC c1aR-5 uniq 0.97 0.919 0.58 DISO 0.0
3 fp_D Q7TN99 268 DPRRAVGVGVGVGVGV                  CCCCCCCCCCCCCCCC c1d-AT-4 multi 0.975 0.949 0.617 DISO 0.0
4 fp_D Q7TN99 269 PRRAVGVGVGVGVGVPS                   CCCCCCCCCCCCCCCCC c1c-4 multi-selected 0.975 0.948 0.597 DISO 0.0
5 cand_D Q7TN99 343 DTFNLHSLENSLMDMI        *+++*     CCCCCCCCCCCCCCCC c1aR-5 multi-selected 0.571 0.629 0.432 DISO 0.0
6 cand_D Q7TN99 346 NLHSLENSLMDMIR     *+++*      CCCCCCCCCCCCCC c3-4 multi-selected 0.536 0.631 0.444 DISO 0.0
7 fp_D Q7TN99 471 DEDEITASFRRFGPLVVD                    CHHHHHHHHCCCCCEEEE c4-4 uniq 0.016 0.035 0.278 boundary boundary|RRM1_CPEB2_like; 0.0
8 fp_D Q7TN99 570 FVGGVPRPLRAVELAM                  EECCCCCCCCHHHHHH c1a-5 multi-selected 0.021 0.022 0.159 boundary boundary|RRM1_CPEB2_like; boundary|RRM2_CPEB2_like; 0.0
9 fp_D Q7TN99 574 VPRPLRAVELAMIMDR                  CCCCCCHHHHHHHHHH c1d-4 multi 0.015 0.019 0.094 boundary boundary|RRM1_CPEB2_like; boundary|RRM2_CPEB2_like; 0.0
10 fp_D Q7TN99 574 VPRPLRAVELAMIM                CCCCCCHHHHHHHH c2-AT-4 multi 0.016 0.02 0.104 boundary boundary|RRM1_CPEB2_like; boundary|RRM2_CPEB2_like; 0.0
11 fp_D Q7TN99 579 RAVELAMIMDRLYGGV                  CHHHHHHHHHHHCCCE c1aR-4 multi-selected 0.011 0.012 0.066 boundary boundary|RRM1_CPEB2_like; boundary|RRM2_CPEB2_like; 0.0
12 fp_D Q7TN99 583 LAMIMDRLYGGVCYAG                  HHHHHHHHCCCEEEEE c1aR-4 multi-selected 0.01 0.008 0.062 boundary boundary|RRM1_CPEB2_like; boundary|RRM2_CPEB2_like; 0.0
13 fp_D Q7TN99 622 YIAAISARFVQLQH                HHHHHHHCCEEEEE c2-AT-5 multi 0.025 0.023 0.138 boundary boundary|RRM2_CPEB2_like; boundary|CEBP_ZZ; 0.143
14 fp_D Q7TN99 622 YIAAISARFVQLQH                HHHHHHHCCEEEEE c3-4 multi-selected 0.025 0.023 0.138 boundary boundary|RRM2_CPEB2_like; boundary|CEBP_ZZ; 0.143

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment