Q8K3Y6 | Zinc finger CCCH-type antiviral protein 1   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D Q8K3Y6 18 GGRMTLEELLGEIRLPE                   CCCCCHHHHHHHCCCCH c1c-AT-4 multi 0.078 0.045 0.126 boundary 0.0
2 fp_D Q8K3Y6 19 GRMTLEELLGEIRLPE                  CCCCHHHHHHHCCCCH c1aR-4 multi-selected 0.081 0.045 0.133 boundary 0.0
3 fp_D Q8K3Y6 19 GRMTLEELLGEIRLPE                  CCCCHHHHHHHCCCCH c1a-4 multi-selected 0.081 0.045 0.133 boundary 0.0
4 fp_D Q8K3Y6 19 GRMTLEELLGEIRLPE                  CCCCHHHHHHHCCCCH c1d-4 multi 0.081 0.045 0.133 boundary 0.0
5 fp_D Q8K3Y6 81 PCDSLHLCKLNLLG                CCCCEEECCCCCCC c2-4 uniq 0.011 0.035 0.017 boundary 0.429
6 fp_D Q8K3Y6 250 RDRFLHNSLEFLSPVVSP                    CCCCCCCCCCCCCCCCCC c4-4 uniq 0.953 0.943 0.483 DISO 0.0
7 fp_D Q8K3Y6 305 QLSPVSSKAAGVQG                CCCCCCCCCCCCCC c3-AT uniq 0.988 0.943 0.711 DISO 0.0
8 fp_D Q8K3Y6 357 QRNEAVAMKMGMEVKG                  CCCCCCCCCCCCCCCC c1d-AT-4 uniq 0.985 0.948 0.565 DISO 0.0
9 fp_D Q8K3Y6 381 RVPFLNSYIDGVTMEK                  CCCCCCCCCCCCCCCC c1a-5 uniq 0.893 0.792 0.398 DISO 0.0
10 fp_D Q8K3Y6 404 GKKFTANDLENLLLLND                   CCCCCCCCCCCCCCCCC c1c-AT-4 multi-selected 0.965 0.853 0.392 DISO 0.0
11 fp_D Q8K3Y6 404 GKKFTANDLENLLLLN                  CCCCCCCCCCCCCCCC c1a-AT-4 multi-selected 0.964 0.851 0.387 DISO 0.0
12 fp_D Q8K3Y6 405 KKFTANDLENLLLLND                  CCCCCCCCCCCCCCCC c1d-AT-4 multi 0.966 0.853 0.382 DISO 0.0
13 fp_D Q8K3Y6 405 KKFTANDLENLLLLN                 CCCCCCCCCCCCCCC c1b-AT-4 multi 0.965 0.851 0.376 DISO 0.0
14 fp_D Q8K3Y6 571 LLRYILNPLFRMDN                HHHHCCCCCCCCCC c3-4 uniq 0.805 0.326 0.266 boundary 0.0
15 fp_O Q8K3Y6 618 FVYTTWRDFQDMES                EECCCCEECCCHHH c3-AT uniq 0.011 0.028 0.126 ORD 0.286
16 fp_beta_D Q8K3Y6 736 YELSFQGMIQTNIASKT                   EEEEECCEEEEECCCCC c1cR-4 uniq 0.071 0.038 0.313 boundary boundary|WWE; 0.75

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment