Q8N668 | COMM domain-containing protein 1   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D Q8N668 47 EFRPFLAKMRGILK                HHHHHHHHHHHHHH c3-4 multi-selected 0.011 0.035 0.25 boundary MID|Commd1_MURR1; 0.0
2 fp_D Q8N668 51 FLAKMRGILKSIAS                HHHHHHHHHHHHHH c3-4 multi-selected 0.014 0.035 0.221 boundary MID|Commd1_MURR1; 0.0
3 fp_D Q8N668 55 MRGILKSIASADMDFNQ                   HHHHHHHHHHCCCCHHH c1c-AT-4 multi 0.019 0.051 0.182 boundary MID|Commd1_MURR1; 0.0
4 fp_O Q8N668 61 SIASADMDFNQLEA                HHHHCCCCHHHHHH c3-AT multi 0.022 0.064 0.209 ORD MID|Commd1_MURR1; 0.0
5 fp_O Q8N668 65 ADMDFNQLEAFLTAQT                  CCCCHHHHHHHHHHHH c1aR-4 multi-selected 0.026 0.071 0.262 ORD MID|Commd1_MURR1; 0.0
6 cand_D Q8N668 134 HSAQIHTPVAIIELEL     +++++++*+*+* HHHHCCCCEEEEEEEE c1a-4 multi-selected 0.07 0.094 0.296 boundary MID|Commd1_MURR1; 0.429
7 cand_beta_D Q8N668 136 AQIHTPVAIIELELGK   +++++++*+*+*++ HHCCCCEEEEEEEECC c1a-AT-4 multi 0.054 0.07 0.26 boundary MID|Commd1_MURR1; 0.714
8 cand_beta_D Q8N668 136 AQIHTPVAIIELEL   +++++++*+*+* HHCCCCEEEEEEEE c2-AT-4 multi 0.059 0.071 0.283 boundary MID|Commd1_MURR1; 0.571
9 cand_beta_D Q8N668 138 IHTPVAIIELELGK +++++++*+*+*++ CCCCEEEEEEEECC c2-4 multi-selected 0.046 0.047 0.24 boundary MID|Commd1_MURR1; 0.857
10 cand_beta_D Q8N668 155 ESEFLCLEFDEVKVNQ           ++++++ CCCCEEEEECHHHHHH c1a-4 multi-selected 0.021 0.058 0.119 boundary boundary|Commd1_MURR1; 0.714
11 cand_beta_D Q8N668 157 EFLCLEFDEVKVNQ         ++++++ CCEEEEECHHHHHH c2-5 multi-selected 0.017 0.047 0.118 boundary boundary|Commd1_MURR1; 0.571
12 cand_D Q8N668 167 KVNQILKTLSEVEE +++++*++*++*++ HHHHHHHHHHHHHH c3-4 uniq 0.011 0.055 0.193 boundary boundary|Commd1_MURR1; 0.0
13 fp_D Q8N668 174 TLSEVEESISTLIS +*++*+++       HHHHHHHHHHHHHC c3-4 uniq 0.068 0.123 0.297 boundary boundary|Commd1_MURR1; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment