Q93052 | LPP

Q93052 | Lipoma-preferred partner proviz swissmodel

Reference DB: NESdb:138
Species: Homo sapiens (Human)
Evidence: LMB Sensitive
Mutation(export): 117LDAEIDSLTSIL128 by Deletion
Mutation(bind): Unknown
Functional seq: Undetermined
Sites: -

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)

#	candidates	id	start#	sequence	secondary	class	multi-pattern	diso	spotd	iup	loc_DISO	loc_CDD	beta
1	cand_D	Q93052	120	EIDSLTSILADLEC *	CCCCCCCCCCCCCC	c3-4	uniq	0.959	0.913	0.587	DISO	MID\|Atrophin-1 superfamily;	0.0
2	fp_D	Q93052	435	QVFHVDCFTCIICN	CCCCCCCEECCCCC	c3-AT	multi	0.005	0.034	0.015	boundary	boundary\|LIM1_TRIP6; boundary\|LIM1_TRIP6;	0.286
3	fp_D	Q93052	435	QVFHVDCFTCIICNNK	CCCCCCCEECCCCCCC	c1aR-4	multi-selected	0.006	0.037	0.014	boundary	boundary\|LIM1_TRIP6; boundary\|LIM1_TRIP6;	0.286
4	fp_D	Q93052	551	ETVRIVALDRDFHVHC	CCEEEEECCCCCCCCC	c1d-4	uniq	0.017	0.036	0.13	boundary	boundary\|LIM2_TRIP6; boundary\|LIM3_TRIP6;	0.429

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment