Q96D46 | 60S ribosomal export protein NMD3 [Homo sapiens]   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D Q96D46 29 ANICVACLRSKVDISQ                  CCCCHHHHCCCCCCCC c1d-4 uniq 0.015 0.054 0.055 boundary boundary|NMD3; 0.0
2 fp_D Q96D46 75 SRELLALCLKKIKAPLSK                    CHHHHHHHHHHHCCCCCC c4-4 multi 0.062 0.033 0.025 boundary MID|NMD3; 0.0
3 fp_D Q96D46 79 LALCLKKIKAPLSKVR                  HHHHHHHHCCCCCCCC c1aR-5 multi 0.069 0.033 0.032 boundary MID|NMD3; 0.0
4 fp_D Q96D46 82 CLKKIKAPLSKVRLVD                  HHHHHCCCCCCCCEEE c1a-5 multi-selected 0.084 0.032 0.048 boundary MID|NMD3; 0.0
5 fp_D Q96D46 84 KKIKAPLSKVRLVD                HHHCCCCCCCCEEE c2-AT-4 multi 0.09 0.034 0.05 boundary MID|NMD3; 0.0
6 fp_beta_O Q96D46 117 QKEVMNGAILQQVFVVD                   EEEEECCEEEEEEEEEE c1c-4 multi-selected 0.026 0.022 0.041 ORD MID|NMD3; 0.75
7 fp_beta_O Q96D46 120 VMNGAILQQVFVVD                EECCEEEEEEEEEE c2-AT-5 multi 0.028 0.022 0.027 ORD MID|NMD3; 0.857
8 fp_beta_O Q96D46 128 QVFVVDYVVQSQMCGDC                   EEEEEEEEEEEECCCCC c1cR-4 uniq 0.012 0.027 0.031 ORD MID|NMD3; 1.0
9 fp_O Q96D46 164 LHKKTFYYLEQLILKY                  CHHHHHHHHHHHHHHH c1a-AT-4 multi-selected 0.048 0.046 0.033 ORD MID|NMD3; 0.0
10 fp_O Q96D46 165 HKKTFYYLEQLILKY                 HHHHHHHHHHHHHHH c1b-4 multi 0.047 0.042 0.031 ORD MID|NMD3; 0.0
11 fp_beta_O Q96D46 184 NTLRIKEIHDGLDFYY                  CCCCEEEECCEEEEEE c1aR-4 multi-selected 0.013 0.034 0.114 ORD MID|NMD3; 0.714
12 fp_beta_O Q96D46 184 NTLRIKEIHDGLDFYY                  CCCCEEEECCEEEEEE c1d-4 multi 0.013 0.034 0.114 ORD MID|NMD3; 0.714
13 fp_O Q96D46 261 LAQSLGNMNQICVCI                 HHHHHCCCCCEEEEE c1b-4 multi-selected 0.024 0.031 0.049 ORD boundary|NMD3; 0.143
14 fp_beta_O Q96D46 264 SLGNMNQICVCIRVTS                  HHCCCCCEEEEEEECC c1d-5 multi 0.019 0.025 0.04 ORD boundary|NMD3; 0.571
15 fp_beta_O Q96D46 269 NQICVCIRVTSAIHLID                   CCEEEEEEECCEEEEEC c1c-4 multi-selected 0.012 0.013 0.047 ORD boundary|NMD3; 0.75
16 fp_beta_O Q96D46 271 ICVCIRVTSAIHLID                 EEEEEEECCEEEEEC c1b-AT-4 multi 0.011 0.01 0.046 ORD boundary|NMD3; 0.714
17 fp_O Q96D46 280 AIHLIDPNTLQVAD                EEEEECCCCCCEEE c3-AT uniq 0.017 0.035 0.123 ORD boundary|NMD3; 0.286
18 fp_beta_D Q96D46 315 EFIVMECSIVQDIKRAA                   EEEEEEEEEEECCCCCC c1cR-4 uniq 0.096 0.142 0.12 boundary 0.875
19 cand_D Q96D46 476 PRISLAEMLEDLHISQ .*..*...*..*.*.. CCCCHHHHHHCCCCCC c1aR-4 multi-selected 0.703 0.43 0.578 DISO 0.0
20 cand_D Q96D46 476 PRISLAEMLEDLHISQ .*..*...*..*.*.. CCCCHHHHHHCCCCCC c1a-4 multi-selected 0.703 0.43 0.578 DISO 0.0
21 cand_D Q96D46 476 PRISLAEMLEDLHISQ .*..*...*..*.*.. CCCCHHHHHHCCCCCC c1d-4 multi 0.703 0.43 0.578 DISO 0.0
22 cand_D Q96D46 477 RISLAEMLEDLHISQ *..*...*..*.*.. CCCHHHHHHCCCCCC c1b-AT-5 multi 0.702 0.431 0.573 DISO 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment