Q96T21 | Selenocysteine insertion sequence-binding protein 2   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D Q96T21 19 DVKPFVPRFAGLNVAW                  CCCCCCCCCCCCCCCC c1a-5 multi-selected 0.847 0.875 0.139 DISO 0.0
2 fp_D Q96T21 20 VKPFVPRFAGLNVAW                 CCCCCCCCCCCCCCC c1b-4 multi 0.845 0.87 0.127 DISO 0.0
3 fp_D Q96T21 23 FVPRFAGLNVAW              CCCCCCCCCCCC c2-rev multi 0.848 0.853 0.107 DISO 0.0
4 fp_D Q96T21 60 TEQKIYTEDMAFGA                CCCCCCCCCCCCCC c2-AT-4 uniq 0.884 0.763 0.369 DISO 0.0
5 fp_D Q96T21 212 SKPEFEFTTLDFPE                CCCCCCCCCCCCCC c2-4 uniq 0.968 0.95 0.438 DISO 0.0
6 fp_D Q96T21 225 ELQGAENNMSEIQK                CCCCCCCCCCCCCC c3-AT uniq 0.979 0.953 0.593 DISO 0.0
7 fp_D Q96T21 241 KWGPVHSVSTDISLLR                  CCCCCCCCCCCCCCCC c1d-4 multi 0.966 0.962 0.443 DISO 0.0
8 fp_D Q96T21 244 PVHSVSTDISLLRE                CCCCCCCCCCCCCC c3-4 multi-selected 0.958 0.96 0.406 DISO 0.0
9 fp_D Q96T21 254 LLREVVKPAAVLSK                CCCCCCCCCCCCCC c3-AT uniq 0.846 0.959 0.355 DISO 0.0
10 fp_D Q96T21 311 ELSAAPKNVTSMINLKT                   CCCCCCCCCCCCCCCCC c1c-AT-5 multi-selected 0.982 0.964 0.529 DISO 0.0
11 fp_D Q96T21 311 ELSAAPKNVTSMIN                CCCCCCCCCCCCCC c3-AT multi 0.98 0.966 0.515 DISO 0.0
12 fp_D Q96T21 448 VQLDLGGMLTALEKKQ                  EEECCCCCHHHHHHHH c1aR-4 uniq 0.848 0.879 0.656 DISO 0.0
13 fp_D Q96T21 526 AKKPTSLKKIILKE                CCCCCHHHHHHHHH c2-AT-4 uniq 0.871 0.856 0.67 DISO 0.0
14 cand_D Q96T21 641 VDACVTDLLKELVRFQD +++++++++++++++++ HHHHHHHHHHHHHHHHH c1c-4 multi-selected 0.279 0.158 0.217 DISO boundary|Ribosomal_L7Ae; 0.0
15 cand_D Q96T21 642 DACVTDLLKELVRFQD ++++++++++++++++ HHHHHHHHHHHHHHHH c1d-AT-4 multi 0.282 0.159 0.217 DISO boundary|Ribosomal_L7Ae; 0.0
16 cand_D Q96T21 644 CVTDLLKELVRFQD ++++++++++++++ HHHHHHHHHHHHHH c3-4 multi-selected 0.296 0.163 0.224 DISO boundary|Ribosomal_L7Ae; 0.0
17 fp_D Q96T21 661 QKDPVKAKTKRRLVLGL                   CCCHHHHCCCCEEEEHH c1c-AT-4 uniq 0.621 0.23 0.325 DISO boundary|Ribosomal_L7Ae; 0.125
18 fp_D Q96T21 673 LVLGLREVLKHLKLKK                  EEEHHHHHHHHHHCCC c1a-5 multi-selected 0.297 0.04 0.135 DISO boundary|Ribosomal_L7Ae; 0.0
19 fp_D Q96T21 673 LVLGLREVLKHLKLKK                  EEEHHHHHHHHHHCCC c1aR-4 multi 0.297 0.04 0.135 DISO boundary|Ribosomal_L7Ae; 0.0
20 fp_D Q96T21 673 LVLGLREVLKHLKLKK                  EEEHHHHHHHHHHCCC c1d-5 multi 0.297 0.04 0.135 DISO boundary|Ribosomal_L7Ae; 0.0
21 fp_D Q96T21 682 KHLKLKKLKCVIISP                 HHHHCCCCEEEEECC c1b-4 multi 0.27 0.033 0.098 DISO MID|Ribosomal_L7Ae; 0.429
22 fp_D Q96T21 682 KHLKLKKLKCVIISPN                  HHHHCCCCEEEEECCC c1aR-4 multi-selected 0.271 0.034 0.104 DISO MID|Ribosomal_L7Ae; 0.429
23 fp_beta_D Q96T21 737 SLNKAVPVSVVGIFS                 HHCCCCCEEEEEEEC c1b-AT-5 multi 0.259 0.025 0.169 boundary boundary|Ribosomal_L7Ae; 0.571
24 fp_beta_D Q96T21 738 LNKAVPVSVVGIFS                HCCCCCEEEEEEEC c2-4 multi-selected 0.249 0.023 0.17 boundary boundary|Ribosomal_L7Ae; 0.571
25 cand_D Q96T21 751 SYDGAQDQFHKMVELTV      ++++++++++++ CCCCHHHHHHHHHHHHH c1c-AT-4 multi-selected 0.145 0.038 0.222 DISO boundary|Ribosomal_L7Ae; 0.0
26 cand_D Q96T21 755 AQDQFHKMVELTVAA  ++++++++++++++ HHHHHHHHHHHHHHH c1b-4 multi 0.145 0.041 0.238 DISO boundary|Ribosomal_L7Ae; 0.0
27 fp_D Q96T21 838 LEESLEASTSQMMNLNL                   HHHHHHHHHHHHHCCCC c1c-AT-4 multi-selected 0.941 0.879 0.509 DISO 0.0
28 fp_D Q96T21 842 LEASTSQMMNLNLXX                 HHHHHHHHHCCCC c1b-AT-4-Ct multi 0.929 0.904 0.524 DISO 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment