Q99AM3 | B-cell specific latent nuclear protein   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D Q99AM3 2 AGRRLTWISEFIVGA                 CCCCCHHHHHHHHHH c1b-4 multi-selected 0.285 0.169 0.038 boundary 0.0
2 fp_D Q99AM3 3 GRRLTWISEFIVGA                CCCCHHHHHHHHHH c2-AT-4 multi-selected 0.248 0.133 0.038 boundary 0.0
3 fp_D Q99AM3 24 LVKWLDRSTGTFLA                CEEEEECCCCEEEE c3-AT uniq 0.074 0.027 0.101 boundary 0.429
4 fp_D Q99AM3 40 ARNDVIPLDSLQFFI                 CCCCCCCCCHHHHHH c1b-4 multi 0.065 0.048 0.055 boundary 0.0
5 fp_D Q99AM3 41 RNDVIPLDSLQFFI                CCCCCCCCHHHHHH c2-4 multi-selected 0.058 0.048 0.048 boundary 0.0
6 fp_D Q99AM3 43 DVIPLDSLQFFIDFKR                  CCCCCCHHHHHHHHHH c1d-5 multi 0.036 0.038 0.035 boundary 0.0
7 fp_D Q99AM3 80 KICTTSRRLRRLPG                HHHCCCHHHHCCCC c3-AT uniq 0.079 0.095 0.232 boundary 0.0
8 fp_D Q99AM3 232 TTVHTDNVEDDLTLLD                  CCCCCCCCCCCCCCHH c1d-AT-4 uniq 0.449 0.703 0.74 DISO 0.0
9 fp_D Q99AM3 250 SACALMYHVGQEMDMLM                   HHHHHHHHHHHHHHHHH c1c-4 multi-selected 0.031 0.416 0.422 DISO 0.0
10 fp_D Q99AM3 251 ACALMYHVGQEMDMLM                  HHHHHHHHHHHHHHHH c1d-4 multi 0.031 0.413 0.419 DISO 0.0
11 fp_D Q99AM3 254 LMYHVGQEMDMLMR                HHHHHHHHHHHHHH c3-4 multi-selected 0.036 0.382 0.417 DISO 0.0
12 fp_D Q99AM3 273 DLFDLLGIPEDVIATS                  CCCCCCCCCCCCCCCC c1aR-4 uniq 0.597 0.565 0.531 DISO 0.0
13 fp_D Q99AM3 306 AASAVGAGVEDVYLAG                  HHCCCCCCCCEEECCC c1a-4 multi-selected 0.537 0.534 0.326 DISO 0.143
14 fp_D Q99AM3 308 SAVGAGVEDVYLAG                CCCCCCCCEEECCC c2-AT-4 multi 0.53 0.501 0.306 DISO 0.286
15 fp_D Q99AM3 390 ARPPVMITDRLGVEV                 CCCCCCCCCCEEEEE c1b-AT-4 multi 0.057 0.101 0.134 boundary 0.143
16 fp_D Q99AM3 391 RPPVMITDRLGVEV                CCCCCCCCCEEEEE c2-AT-4 multi 0.052 0.088 0.129 boundary 0.143
17 fp_beta_D Q99AM3 396 ITDRLGVEVFYFGR                CCCCEEEEEEEECC c2-4 multi-selected 0.024 0.027 0.107 boundary 0.857
18 fp_D Q99AM3 403 EVFYFGRPAMSLEVER                  EEEEECCCCCEEEEEC c1a-AT-5 multi 0.046 0.022 0.087 boundary 0.286
19 fp_beta_D Q99AM3 408 GRPAMSLEVERKVFILC                   CCCCCEEEEECCEEEEE c1c-4 multi-selected 0.073 0.026 0.093 boundary 0.625
20 fp_O Q99AM3 459 DVNLLAAVLRSFAS                CHHHHHHHHHHHCC c3-4 multi-selected 0.022 0.021 0.136 ORD 0.0
21 fp_O Q99AM3 462 LLAAVLRSFASGLVIVS                   HHHHHHHHHCCCCEEEE c1c-5 multi 0.012 0.014 0.062 ORD 0.0
22 fp_O Q99AM3 463 LAAVLRSFASGLVIVSL                   HHHHHHHHCCCCEEEEC c1c-AT-4 multi 0.011 0.014 0.048 ORD 0.0
23 fp_O Q99AM3 463 LAAVLRSFASGLVIVS                  HHHHHHHHCCCCEEEE c1a-AT-4 multi 0.011 0.014 0.05 ORD 0.0
24 fp_O Q99AM3 463 LAAVLRSFASGLVIVS                  HHHHHHHHCCCCEEEE c1d-4 multi 0.011 0.014 0.05 ORD 0.0
25 fp_O Q99AM3 466 VLRSFASGLVIVSLRS                  HHHHHCCCCEEEECCC c1a-5 multi-selected 0.01 0.014 0.024 ORD 0.286
26 fp_O Q99AM3 467 LRSFASGLVIVSLRS                 HHHHCCCCEEEECCC c1b-AT-4 multi 0.01 0.013 0.023 ORD 0.429
27 fp_beta_O Q99AM3 471 ASGLVIVSLRSGIYVKN                   CCCCEEEECCCEEEEEC c1c-4 multi 0.01 0.015 0.024 ORD 0.625
28 fp_beta_O Q99AM3 472 SGLVIVSLRSGIYVKN                  CCCEEEECCCEEEEEC c1aR-4 multi 0.01 0.015 0.024 ORD 0.571
29 fp_beta_O Q99AM3 472 SGLVIVSLRSGIYVKN                  CCCEEEECCCEEEEEC c1d-4 multi 0.01 0.015 0.024 ORD 0.571
30 fp_O Q99AM3 510 LSSRAVLDVFNVAQ                CCHHHHHHHHHHHH c2-AT-4 uniq 0.034 0.047 0.058 ORD 0.0
31 cand_beta_D Q99AM3 547 EQFDMVPLVIKLRLRS     *+++++++++   CCCCCCCEEEEEEEEE c1a-4 multi-selected 0.062 0.054 0.087 boundary 0.571
32 cand_beta_D Q99AM3 547 EQFDMVPLVIKLRLRS     *+++++++++   CCCCCCCEEEEEEEEE c1d-4 multi 0.062 0.054 0.087 boundary 0.571
33 cand_beta_D Q99AM3 548 QFDMVPLVIKLRLRS    *+++++++++   CCCCCCEEEEEEEEE c1b-5 multi 0.058 0.048 0.087 boundary 0.714
34 cand_beta_D Q99AM3 551 MVPLVIKLRLRS *+++++++++   CCCEEEEEEEEE c2-rev multi-selected 0.043 0.039 0.076 boundary 1.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment