Q9BYM8 | RanBP-type and C3HC4-type zinc finger-containing protein 1   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D Q9BYM8 45 LKPEVSPTQDIRLWV                 ECCCCCCCCCEEEEE c1b-AT-4 uniq 0.091 0.072 0.317 boundary boundary|Hoil1_N; 0.143
2 fp_D Q9BYM8 60 SVEDAQMHTVTIWL                EEECCCCEEEEEEE c2-AT-5 multi-selected 0.031 0.015 0.199 boundary boundary|Hoil1_N; 0.429
3 fp_beta_D Q9BYM8 62 EDAQMHTVTIWLTV                ECCCCEEEEEEEEE c2-AT-4 multi-selected 0.026 0.015 0.188 boundary boundary|Hoil1_N; 0.714
4 fp_D Q9BYM8 76 RPDMTVASLKDMVFLDY                   CCCCCHHHHHHHHHHCC c1c-AT-4 multi 0.029 0.023 0.183 boundary boundary|Hoil1_N; 0.0
5 fp_O Q9BYM8 76 RPDMTVASLKDMVFLD                  CCCCCHHHHHHHHHHC c1a-AT-4 multi 0.029 0.023 0.187 ORD boundary|Hoil1_N; 0.0
6 fp_D Q9BYM8 77 PDMTVASLKDMVFLDY                  CCCCHHHHHHHHHHCC c1aR-4 multi-selected 0.031 0.024 0.179 boundary boundary|Hoil1_N; 0.0
7 fp_D Q9BYM8 77 PDMTVASLKDMVFLDY                  CCCCHHHHHHHHHHCC c1d-4 multi 0.031 0.024 0.179 boundary boundary|Hoil1_N; 0.0
8 fp_O Q9BYM8 77 PDMTVASLKDMVFLD                 CCCCHHHHHHHHHHC c1b-4 multi 0.031 0.024 0.183 ORD boundary|Hoil1_N; 0.0
9 fp_O Q9BYM8 78 DMTVASLKDMVFLD                CCCHHHHHHHHHHC c2-AT-5 multi 0.031 0.023 0.178 ORD MID|Hoil1_N; 0.0
10 cand_D Q9BYM8 145 RERQLRMLEDLGFKD        *  *     HHHHHHHHCCCCCCC c1b-4 uniq 0.832 0.516 0.475 boundary boundary|Hoil1_N; 0.0
11 fp_D Q9BYM8 151 MLEDLGFKDLTLQP  *  *          HHCCCCCCCCCCCC c2-5 uniq 0.856 0.614 0.515 DISO boundary|Hoil1_N; 0.0
12 fp_O Q9BYM8 378 GWCFFEDDVNEFTCPVCF                    CEEEECCCCCEEECCCCC c4-4 uniq 0.022 0.032 0.01 ORD small|IBR; 0.375
13 fp_D Q9BYM8 393 VCFHVNCLLCKAIHEQM                   CCCCCCCCCCCCCCCCC c1cR-4 uniq 0.012 0.047 0.009 boundary 0.0
14 fp_D Q9BYM8 427 AARQTTEMLKVMLQQ                 HHHHHHHHHHHHHHC c1b-AT-4 multi 0.205 0.069 0.293 boundary 0.0
15 fp_D Q9BYM8 428 ARQTTEMLKVMLQQ                HHHHHHHHHHHHHC c2-AT-4 multi-selected 0.198 0.063 0.292 boundary 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment