Q9BZB8 | Cytoplasmic polyadenylation element-binding protein 1   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D Q9BZB8 32 IFRRINAILDNSLDFSR                   HHHHHHHHHCCCCCCCC c1c-5 uniq 0.251 0.353 0.185 DISO MID|CEBP1_N; 0.0
2 cand_D Q9BZB8 85 SSRGLPDANDLCLGL           ++++* CCCCCCCCCCCCCCC c1b-AT-4 uniq 0.495 0.67 0.409 DISO MID|CEBP1_N; 0.0
3 cand_D Q9BZB8 91 DANDLCLGLQSLSLTG     ++++*++*+*   CCCCCCCCCCCCCCCC c1a-4 multi-selected 0.248 0.607 0.317 DISO MID|CEBP1_N; 0.0
4 cand_D Q9BZB8 93 NDLCLGLQSLSLTG   ++++*++*+*   CCCCCCCCCCCCCC c2-4 multi-selected 0.211 0.602 0.296 DISO MID|CEBP1_N; 0.0
5 fp_D Q9BZB8 127 VLSMLHNPLGNVLG                CCCCCCCCCCCCCC c3-4 uniq 0.927 0.84 0.434 DISO MID|CEBP1_N; 0.0
6 cand_D Q9BZB8 194 GSDHLSDLISSLRISP     ++++*++*+*   CCCCCHHHCCCCCCCC c1a-4 multi-selected 0.741 0.764 0.368 DISO MID|CEBP1_N; 0.0
7 cand_D Q9BZB8 194 GSDHLSDLISSLRISP     ++++*++*+*   CCCCCHHHCCCCCCCC c1d-4 multi 0.741 0.764 0.368 DISO MID|CEBP1_N; 0.0
8 fp_D Q9BZB8 311 CKVFLGGVPWDITEAG                  CCEEECCCCCCCCHHH c1aR-4 uniq 0.018 0.046 0.114 boundary boundary|CEBP1_N; boundary|RRM1_CPEB1; 0.143
9 fp_D Q9BZB8 319 PWDITEAGLVNTFRVFG                   CCCCCHHHHHHHHCCCC c1c-AT-4 multi-selected 0.01 0.043 0.135 boundary boundary|CEBP1_N; boundary|RRM1_CPEB1; 0.0
10 fp_D Q9BZB8 321 DITEAGLVNTFRVFG                 CCCHHHHHHHHCCCC c1b-AT-5 multi 0.01 0.042 0.137 boundary boundary|CEBP1_N; boundary|RRM1_CPEB1; 0.0
11 fp_D Q9BZB8 326 GLVNTFRVFGSLSVEW                  HHHHHHCCCCCEEEEC c1a-AT-5 multi-selected 0.012 0.033 0.192 boundary boundary|CEBP1_N; boundary|RRM1_CPEB1; 0.0
12 fp_D Q9BZB8 326 GLVNTFRVFGSLSVEW                  HHHHHHCCCCCEEEEC c1d-AT-5 multi 0.012 0.033 0.192 boundary boundary|CEBP1_N; boundary|RRM1_CPEB1; 0.0
13 fp_D Q9BZB8 327 LVNTFRVFGSLSVEW                 HHHHHCCCCCEEEEC c1b-5 multi 0.012 0.032 0.191 boundary boundary|CEBP1_N; boundary|RRM1_CPEB1; 0.143
14 fp_D Q9BZB8 364 LVFELEKSVRSLLQACS                   EEECCHHHHHHHHHCCC c1cR-4 multi 0.021 0.065 0.14 boundary MID|RRM1_CPEB1; 0.0
15 fp_D Q9BZB8 364 LVFELEKSVRSLLQ                EEECCHHHHHHHHH c3-4 multi-selected 0.013 0.052 0.102 boundary MID|RRM1_CPEB1; 0.0
16 fp_O Q9BZB8 484 YLKAVSAAFVEIKT                HHHHHHHCCCCCCC c2-AT-5 multi 0.048 0.048 0.113 ORD boundary|RRM2_CPEB1; boundary|CEBP_ZZ; 0.0
17 fp_O Q9BZB8 484 YLKAVSAAFVEIKT                HHHHHHHCCCCCCC c3-4 multi-selected 0.048 0.048 0.113 ORD boundary|RRM2_CPEB1; boundary|CEBP_ZZ; 0.0
18 fp_O Q9BZB8 493 VEIKTTKFTKKVQIDP                  CCCCCCCCCCEEEEEC c1d-AT-4 uniq 0.039 0.05 0.136 ORD boundary|RRM2_CPEB1; boundary|CEBP_ZZ; 0.143

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment