Q9H4D5 | Nuclear RNA export factor 3   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 cand_D Q9H4D5 288 TFSDTSSNINSILELFP             * *   CCCCCCCCCCCHHHHCC c1c-AT-5 multi-selected 0.026 0.11 0.177 boundary 0.0
2 fp_D Q9H4D5 288 TFSDTSSNINSILE             *  CCCCCCCCCCCHHH c3-AT multi 0.028 0.123 0.19 boundary 0.0
3 cand_D Q9H4D5 292 TSSNINSILELFPKLLCL         * *        CCCCCCCHHHHCCCCCCC c4-4 multi-selected 0.033 0.087 0.141 boundary 0.0
4 fp_D Q9H4D5 298 SILELFPKLLCLDG   * *          CHHHHCCCCCCCCC c3-4 uniq 0.051 0.062 0.121 boundary 0.0
5 fp_D Q9H4D5 332 KGSFFGSEMLKNLVLQF                   CCCCCCCHHHHHHHHHH c1c-4 uniq 0.112 0.036 0.084 boundary boundary|NTF2; 0.0
6 fp_O Q9H4D5 426 ALPKTQHDLSSFLVDM                  CCCCCCCCCCCCEEEE c1a-AT-5 uniq 0.011 0.019 0.086 ORD MID|NTF2; 0.0
7 fp_beta_O Q9H4D5 441 MWYQTEWMLCFSVNG                 EECCCCCEEEEEEEE c1b-AT-4 uniq 0.01 0.008 0.029 ORD MID|NTF2; 0.571
8 fp_beta_O Q9H4D5 449 LCFSVNGVFKEVEGQS                  EEEEEEEEEEEECCCC c1aR-4 uniq 0.016 0.047 0.097 ORD MID|NTF2; 1.0
9 fp_beta_D Q9H4D5 481 SSSSLCIVNDKLFVRD                  CCCCEEEECCEEEEEC c1d-4 uniq 0.024 0.026 0.145 boundary boundary|NTF2; 0.714

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment