Q9H9S0 | Homeobox protein NANOG   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D Q9H9S0 50 TVSPLPSSMDLLIQ                CCCCCCCCCCCCCC c3-4 uniq 0.963 0.964 0.655 DISO boundary|Abdominal-A superfamily; 0.0
2 cand_D Q9H9S0 121 SLQQMQELSNILNLSY     +++*+++*+*   CHHHHHHHHHHCCCCH c1d-5 uniq 0.059 0.557 0.326 DISO MID|Abdominal-A superfamily; boundary|HOX; 0.0
3 fp_D Q9H9S0 263 LEAALEAAGEGLNVIQ                  HHHHHHHHCCCCCCCC c1d-AT-4 multi 0.323 0.403 0.479 DISO 0.0
4 fp_D Q9H9S0 266 ALEAAGEGLNVIQQ                HHHHHCCCCCCCCC c3-AT multi-selected 0.321 0.391 0.448 DISO 0.0
5 fp_D Q9H9S0 273 GLNVIQQTTRYFST                CCCCCCCCCCCCCH c3-AT uniq 0.311 0.34 0.367 DISO 0.0
6 fp_D Q9H9S0 286 TPQTMDLFLNYSMNMQP                   HHHHHHHCCCCCCCCCC c1c-4 uniq 0.26 0.414 0.313 DISO 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment