*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)
# | candidates | id | start# | sequence | secondary | class | multi-pattern | diso | spotd | iup | loc_DISO | loc_CDD | beta |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | fp_D | Q9NQS1 | 144 | LLSSAGDSFSQFRFAE                  | HHCCCCCCCCCEEECC | c1a-AT-5 | uniq | 0.128 | 0.244 | 0.394 | DISO | 0.0 | |
2 | fp_D | Q9NQS1 | 171 | KQNSAFYVDSELLVRA                  | CCCCCEEECHHHHHHH | c1d-AT-4 | uniq | 0.028 | 0.353 | 0.312 | DISO | 0.429 | |
3 | fp_D | Q9NQS1 | 179 | DSELLVRALQELPLCLRL                    | CHHHHHHHHCCCCHHHHC | c4-4 | uniq | 0.01 | 0.282 | 0.217 | DISO | 0.0 | |
4 | cand_D | Q9NQS1 | 274 | PLQSAGDHLEEELDLLL             * *** | CCCCCCCCCHHHHHHHH | c1c-AT-5 | multi | 0.599 | 0.726 | 0.684 | DISO | 0.0 | |
5 | cand_D | Q9NQS1 | 278 | AGDHLEEELDLLLNLDA         * *** *   | CCCCCHHHHHHHHCCCC | c1c-4 | multi-selected | 0.498 | 0.659 | 0.603 | DISO | 0.0 |
*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment