Q9QY15 | ATP-dependent RNA helicase DDX25   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D Q9QY15 93 PLYSVKTFEELRLKE ............... CCCCCCCCCCCCCCH c1b-5 uniq 0.033 0.074 0.244 boundary boundary|SrmB; 0.0
2 fp_D Q9QY15 105 LKEELLKGIYAMGFNR ..........       CCHHHHHHHHHCCCCC c1a-4 multi-selected 0.019 0.05 0.177 boundary boundary|SrmB; 0.0
3 fp_D Q9QY15 106 KEELLKGIYAMGFNR .........       CHHHHHHHHHCCCCC c1b-4 multi 0.019 0.049 0.183 boundary boundary|SrmB; 0.0
4 fp_D Q9QY15 154 FVLAMLSRVNALELFP                  HHHHHHHCCCCCCCCC c1a-5 multi-selected 0.011 0.025 0.05 boundary MID|SrmB; 0.0
5 fp_D Q9QY15 155 VLAMLSRVNALELFP                 HHHHHHCCCCCCCCC c1b-5 multi 0.01 0.025 0.041 boundary MID|SrmB; 0.0
6 fp_O Q9QY15 170 QCLCLAPTYELALQT                 EEEEECCCHHHHHHH c1b-AT-4 uniq 0.031 0.011 0.062 ORD MID|SrmB; 0.143
7 fp_O Q9QY15 183 QTGRVVERMGKFCVDV                  HHHHHHHHHCCCCCCC c1a-4 multi-selected 0.023 0.017 0.077 ORD MID|SrmB; 0.0
8 fp_O Q9QY15 184 TGRVVERMGKFCVDV                 HHHHHHHHCCCCCCC c1b-4 multi 0.019 0.017 0.072 ORD MID|SrmB; 0.0
9 fp_O Q9QY15 187 VVERMGKFCVDVEVMY                  HHHHHCCCCCCCEEEE c1d-5 multi 0.013 0.017 0.062 ORD MID|SrmB; 0.0
10 fp_O Q9QY15 190 RMGKFCVDVEVMYA                HHCCCCCCCEEEEE c3-4 multi-selected 0.01 0.017 0.06 ORD MID|SrmB; 0.143
11 fp_beta_O Q9QY15 192 GKFCVDVEVMYAIRGNR                   CCCCCCCEEEEEECCCC c1cR-4 multi 0.014 0.028 0.095 ORD MID|SrmB; 0.625
12 fp_O Q9QY15 232 FKRKLIDLTKIRVFVLD                   HHCCCCCCCCCEEEEEE c1c-AT-4 multi 0.01 0.022 0.025 ORD MID|SrmB; 0.125
13 fp_O Q9QY15 232 FKRKLIDLTKIRVFV                 HHCCCCCCCCCEEEE c1b-4 multi 0.01 0.024 0.022 ORD MID|SrmB; 0.0
14 fp_O Q9QY15 233 KRKLIDLTKIRVFVLD                  HCCCCCCCCCEEEEEE c1d-AT-4 multi 0.01 0.022 0.024 ORD MID|SrmB; 0.143
15 fp_O Q9QY15 233 KRKLIDLTKIRVFV                HCCCCCCCCCEEEE c2-4 multi-selected 0.01 0.024 0.02 ORD MID|SrmB; 0.0
16 fp_O Q9QY15 235 KLIDLTKIRVFVLDEA                  CCCCCCCCEEEEEECC c1aR-4 multi-selected 0.012 0.02 0.024 ORD MID|SrmB; 0.429
17 fp_O Q9QY15 235 KLIDLTKIRVFVLDE                 CCCCCCCCEEEEEEC c1b-5 multi 0.011 0.02 0.022 ORD MID|SrmB; 0.429
18 fp_O Q9QY15 236 LIDLTKIRVFVLDE                CCCCCCCEEEEEEC c2-AT-5 multi 0.011 0.019 0.023 ORD MID|SrmB; 0.429
19 fp_O Q9QY15 236 LIDLTKIRVFVLDE                CCCCCCCEEEEEEC c3-AT multi 0.011 0.019 0.023 ORD MID|SrmB; 0.429
20 fp_beta_O Q9QY15 275 QMLLFSATFEDSVWQFA                   CEEEEEEECCHHHHHHH c1cR-5 uniq 0.011 0.019 0.063 ORD MID|SrmB; 0.5
21 fp_O Q9QY15 325 GKYQALCNIYGGITIGQ                   CHHHHHHHHHCCCCCCE c1c-AT-4 multi-selected 0.01 0.018 0.044 ORD MID|SrmB; 0.0
22 fp_O Q9QY15 326 KYQALCNIYGGITIGQ                  HHHHHHHHHCCCCCCE c1d-4 multi 0.01 0.017 0.046 ORD MID|SrmB; 0.0
23 fp_beta_O Q9QY15 362 DGHQVSLLSGELTVEQ                  CCCEEEEECCCCCHHH c1d-4 uniq 0.019 0.031 0.197 ORD MID|SrmB; 0.571
24 fp_D Q9QY15 394 ITTNVCARGIDVKQ                EECCCCCCCCCCCC c2-AT-4 multi 0.01 0.03 0.114 boundary MID|SrmB; 0.0
25 fp_D Q9QY15 399 CARGIDVKQVTIVV                CCCCCCCCCCEEEE c2-4 multi-selected 0.01 0.029 0.087 boundary MID|SrmB; 0.0
26 fp_D Q9QY15 401 RGIDVKQVTIVVNFDL                  CCCCCCCCEEEEECCC c1a-AT-4 multi 0.011 0.024 0.119 boundary MID|SrmB; 0.429
27 fp_D Q9QY15 401 RGIDVKQVTIVVNFDL                  CCCCCCCCEEEEECCC c1d-4 multi 0.011 0.024 0.119 boundary MID|SrmB; 0.429
28 fp_beta_D Q9QY15 404 DVKQVTIVVNFDLPV                 CCCCCEEEEECCCCC c1b-5 multi 0.015 0.025 0.152 boundary MID|SrmB; 0.714
29 fp_beta_D Q9QY15 405 VKQVTIVVNFDLPV                CCCCEEEEECCCCC c2-AT-4 multi 0.016 0.024 0.158 boundary MID|SrmB; 0.714
30 fp_beta_D Q9QY15 440 GKKGLAFNMIEVDK                CCCCCEEEEECCCC c2-4 uniq 0.01 0.036 0.153 boundary MID|SrmB; 0.714
31 fp_D Q9QY15 456 LLMKIQDHFNSNIKQLD                   HHHHHHHHHCCCCEECC c1cR-5 uniq 0.031 0.062 0.298 boundary boundary|SrmB; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment