Q9R1A8 | E3 ubiquitin-protein ligase RFWD2   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D Q9R1A8 174 KCNYVVDNIDHLYPNFLV                    CCCCCCCCCCCCCCCHHH c4-4 uniq 0.039 0.077 0.107 boundary 0.0
2 fp_D Q9R1A8 185 LYPNFLVNELILKQ                CCCCHHHHHHHHHH c2-4 uniq 0.036 0.06 0.099 boundary 0.0
3 cand_D Q9R1A8 231 DQDNLDLANVNLMLEL ......+++++++*+* CCCCCCHHHHHHHHHH c1d-AT-4 multi 0.424 0.198 0.198 DISO boundary|WD40 superfamily; 0.0
4 cand_D Q9R1A8 231 DQDNLDLANVNLML ......+++++++* CCCCCCHHHHHHHH c2-4 multi-selected 0.406 0.198 0.203 DISO boundary|WD40 superfamily; 0.0
5 cand_D Q9R1A8 233 DNLDLANVNLMLELLV ....+++++++*+*+. CCCCHHHHHHHHHHHH c1aR-5 multi-selected 0.447 0.202 0.203 DISO boundary|WD40 superfamily; 0.0
6 cand_D Q9R1A8 233 DNLDLANVNLMLELLV ....+++++++*+*+. CCCCHHHHHHHHHHHH c1d-4 multi 0.447 0.202 0.203 DISO boundary|WD40 superfamily; 0.0
7 cand_D Q9R1A8 234 NLDLANVNLMLELLVQK ...+++++++*+*+... CCCHHHHHHHHHHHHHH c1c-AT-5 multi 0.465 0.203 0.213 DISO boundary|WD40 superfamily; 0.0
8 cand_D Q9R1A8 236 DLANVNLMLELLVQK .+++++++*+*+... CHHHHHHHHHHHHHH c1b-5 multi 0.481 0.203 0.21 DISO boundary|WD40 superfamily; 0.0
9 cand_D Q9R1A8 236 DLANVNLMLELLVQ .+++++++*+*+.. CHHHHHHHHHHHHH c3-4 multi-selected 0.476 0.202 0.206 DISO boundary|WD40 superfamily; 0.0
10 fp_D Q9R1A8 256 AESHAAQLQILMEFLK ...............  HHHHHHHHHHHHHHHH c1d-AT-4 multi 0.237 0.17 0.263 DISO boundary|WD40 superfamily; 0.0
11 fp_D Q9R1A8 259 HAAQLQILMEFLKVAR ............     HHHHHHHHHHHHHHHH c1a-4 multi-selected 0.158 0.146 0.253 DISO boundary|WD40 superfamily; 0.0
12 fp_D Q9R1A8 259 HAAQLQILMEFLKVAR ............     HHHHHHHHHHHHHHHH c1d-4 multi 0.158 0.146 0.253 DISO boundary|WD40 superfamily; 0.0
13 fp_D Q9R1A8 261 AQLQILMEFLKVAR ..........     HHHHHHHHHHHHHH c2-4 multi-selected 0.134 0.135 0.246 DISO boundary|WD40 superfamily; 0.0
14 fp_D Q9R1A8 277 KREQLEQIQKELSVLE                  HHHHHHHHHHHHHHHH c1d-4 multi 0.109 0.221 0.396 DISO MID|WD40 superfamily; 0.0
15 fp_D Q9R1A8 280 QLEQIQKELSVLEE                HHHHHHHHHHHHHH c3-4 multi-selected 0.111 0.228 0.404 DISO MID|WD40 superfamily; 0.0
16 fp_D Q9R1A8 287 ELSVLEEDIKRVEE                HHHHHHHHHHHHHH c3-4 uniq 0.191 0.282 0.36 DISO MID|WD40 superfamily; 0.0
17 fp_D Q9R1A8 390 QLDEFQECLSKFTR                CCHHHHHCCCCCCC c3-4 uniq 0.121 0.07 0.24 boundary MID|WD40 superfamily; 0.0
18 fp_O Q9R1A8 435 CDYFAIAGVTKKIKVYE                   CCEEEEECCCCCEEEEE c1c-AT-4 multi 0.011 0.015 0.074 ORD MID|WD40 superfamily; 0.375
19 fp_O Q9R1A8 436 DYFAIAGVTKKIKVYE                  CEEEEECCCCCEEEEE c1aR-4 multi-selected 0.011 0.014 0.075 ORD MID|WD40 superfamily; 0.286
20 fp_O Q9R1A8 436 DYFAIAGVTKKIKVYE                  CEEEEECCCCCEEEEE c1a-AT-4 multi 0.011 0.014 0.075 ORD MID|WD40 superfamily; 0.286
21 fp_O Q9R1A8 436 DYFAIAGVTKKIKVYE                  CEEEEECCCCCEEEEE c1d-4 multi 0.011 0.014 0.075 ORD MID|WD40 superfamily; 0.286
22 fp_O Q9R1A8 519 WSVDFNLMDPKLLASG                  EEEECCCCCCCEEEEE c1aR-4 uniq 0.015 0.017 0.121 ORD MID|WD40 superfamily; 0.0
23 fp_O Q9R1A8 552 ASIEAKANVCCVKFSP                  EEEECCCCEEEEEECC c1a-AT-4 multi-selected 0.01 0.017 0.068 ORD MID|WD40 superfamily; 0.429
24 fp_beta_O Q9R1A8 554 IEAKANVCCVKFSP                EECCCCEEEEEECC c2-AT-4 multi 0.01 0.016 0.068 ORD MID|WD40 superfamily; 0.571
25 fp_O Q9R1A8 586 DLRNTKQPIMVFKG                ECCCCCCCEEECCC c3-AT uniq 0.01 0.028 0.138 ORD MID|WD40 superfamily; 0.286
26 fp_beta_O Q9R1A8 612 GEEIVSASTDSQLKLWN                   CCEEEEEECCCCEEEEE c1c-AT-4 uniq 0.021 0.01 0.155 ORD MID|WD40 superfamily; 0.5
27 fp_beta_D Q9R1A8 669 YYKGLSKTLLTFKFDT                  EECCCCCEEEEEEECC c1a-4 multi-selected 0.021 0.04 0.046 boundary MID|WD40 superfamily; 0.571
28 fp_beta_D Q9R1A8 669 YYKGLSKTLLTFKFDT                  EECCCCCEEEEEEECC c1d-AT-4 multi 0.021 0.04 0.046 boundary MID|WD40 superfamily; 0.571
29 fp_D Q9R1A8 678 LTFKFDTVKSVLDKDR                  EEEEECCCCCCCCCCC c1aR-4 uniq 0.179 0.25 0.179 boundary MID|WD40 superfamily; 0.143

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment