Q9R207 | Nibrin   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_beta_D Q9R207 43 RNHAVLTVNFPVTS                CCCEEEEEECCCCC c2-AT-4 multi 0.049 0.072 0.247 boundary MID|FHA; 0.857
2 fp_D Q9R207 46 AVLTVNFPVTSLSQ                EEEEEECCCCCCCC c3-4 multi-selected 0.112 0.121 0.254 boundary MID|FHA; 0.429
3 fp_D Q9R207 94 GDRVTFGVFESKFRVEY                   CCEEEECCCCCCEEEEC c1c-AT-4 multi 0.043 0.015 0.102 boundary boundary|FHA; boundary|BRCT superfamily; 0.25
4 fp_D Q9R207 95 DRVTFGVFESKFRVEY                  CEEEECCCCCCEEEEC c1aR-4 multi-selected 0.045 0.014 0.098 boundary boundary|FHA; boundary|BRCT superfamily; 0.143
5 fp_D Q9R207 95 DRVTFGVFESKFRVEY                  CEEEECCCCCCEEEEC c1d-4 multi 0.045 0.014 0.098 boundary boundary|FHA; boundary|BRCT superfamily; 0.143
6 fp_D Q9R207 127 VLNQAILQLGGLTA                HHHHHHHHHCCEEE c3-AT uniq 0.037 0.028 0.169 boundary boundary|FHA; boundary|BRCT superfamily; 0.0
7 fp_beta_O Q9R207 144 TEECTHLVMSAVKVTI                  CCCCEEEEECCCCCHH c1a-AT-4 multi 0.012 0.021 0.129 ORD boundary|FHA; MID|BRCT superfamily; 0.714
8 fp_beta_O Q9R207 144 TEECTHLVMSAVKVTI                  CCCCEEEEECCCCCHH c1d-AT-4 multi 0.012 0.021 0.129 ORD boundary|FHA; MID|BRCT superfamily; 0.714
9 fp_O Q9R207 146 ECTHLVMSAVKVTIKT                  CCEEEEECCCCCHHHH c1a-AT-4 multi 0.013 0.019 0.108 ORD MID|BRCT superfamily; 0.429
10 fp_beta_O Q9R207 146 ECTHLVMSAVKVTI                CCEEEEECCCCCHH c2-4 multi-selected 0.012 0.02 0.118 ORD MID|BRCT superfamily; 0.571
11 fp_O Q9R207 147 CTHLVMSAVKVTIKT                 CEEEEECCCCCHHHH c1b-AT-4 multi 0.013 0.019 0.099 ORD MID|BRCT superfamily; 0.286
12 fp_O Q9R207 148 THLVMSAVKVTIKTIC                  EEEEECCCCCHHHHHH c1aR-5 multi-selected 0.013 0.018 0.086 ORD MID|BRCT superfamily; 0.143
13 fp_O Q9R207 148 THLVMSAVKVTIKT                EEEEECCCCCHHHH c2-AT-4 multi 0.014 0.019 0.093 ORD MID|BRCT superfamily; 0.286
14 fp_O Q9R207 151 VMSAVKVTIKTICA                EECCCCCHHHHHHH c3-4 multi-selected 0.014 0.019 0.063 ORD MID|BRCT superfamily; 0.0
15 fp_O Q9R207 154 AVKVTIKTICALIC                CCCCHHHHHHHHHC c3-AT multi 0.014 0.018 0.045 ORD MID|BRCT superfamily; 0.0
16 fp_beta_D Q9R207 264 SAPGTCVVDVGITN                CCCCEEEEECCCCC c2-AT-4 multi-selected 0.168 0.046 0.28 boundary MID|NIBRIN_BRCT_II; 0.714
17 fp_D Q9R207 269 CVVDVGITNTQLIISH                  EEEECCCCCCCEEECH c1d-AT-5 multi 0.222 0.055 0.231 boundary MID|NIBRIN_BRCT_II; 0.0
18 fp_D Q9R207 301 GLRPIPEAEIGLAVIF                  CCCCCCCHHHHHHHHH c1d-AT-5 multi 0.027 0.089 0.343 boundary boundary|NIBRIN_BRCT_II; 0.0
19 fp_D Q9R207 304 PIPEAEIGLAVIFMTT                  CCCCHHHHHHHHHCCC c1a-AT-5 multi 0.027 0.084 0.326 boundary boundary|NIBRIN_BRCT_II; 0.0
20 fp_D Q9R207 306 PEAEIGLAVIFMTT                CCHHHHHHHHHCCC c2-4 multi-selected 0.028 0.082 0.312 boundary boundary|NIBRIN_BRCT_II; 0.0
21 fp_D Q9R207 515 READTSSVGGMDIEL                 CCCCCCCCCCCCCCC c1b-AT-4 uniq 0.963 0.925 0.788 DISO 0.0
22 fp_D Q9R207 564 LLRSTKPELAVQVKVEK                   HHCCCCCHHHHHHHCCC c1c-AT-5 uniq 0.929 0.684 0.607 DISO 0.0
23 cand_beta_D Q9R207 649 PRKLLLTEFRSLVVSN ....**.....*.*.. CCCEEEEEEEEEEECC c1a-4 multi-selected 0.591 0.148 0.415 DISO boundary|Nbs1_C; 1.0
24 cand_beta_D Q9R207 650 RKLLLTEFRSLVVSNH ...**.....*.*... CCEEEEEEEEEEECCC c1aR-4 multi-selected 0.585 0.155 0.412 DISO boundary|Nbs1_C; 1.0
25 cand_beta_D Q9R207 650 RKLLLTEFRSLVVSN ...**.....*.*.. CCEEEEEEEEEEECC c1b-4 multi 0.578 0.141 0.409 DISO boundary|Nbs1_C; 1.0
26 cand_beta_D Q9R207 651 KLLLTEFRSLVVSN ..**.....*.*.. CEEEEEEEEEEECC c2-AT-5 multi 0.566 0.136 0.407 DISO boundary|Nbs1_C; 1.0
27 fp_D Q9R207 713 KNTELEEWLKQEMEVQK                   CCCHHHHHHHHHHHHHH c1c-4 uniq 0.483 0.406 0.54 DISO boundary|Nbs1_C; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment