Q9UGR2 | Zinc finger CCCH domain-containing protein 7B   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D Q9UGR2 29 EAFLLKLVQNLFAEGN                  HHHHHHHHHHHHHHHH c1aR-4 uniq 0.096 0.057 0.069 boundary boundary|PLN03088 superfamily; 0.0
2 fp_D Q9UGR2 52 YKQALVQYMEGLNVAD                  HHHHHHHHHHHHCCCC c1a-4 multi-selected 0.061 0.091 0.154 boundary MID|PLN03088 superfamily; 0.0
3 fp_D Q9UGR2 53 KQALVQYMEGLNVAD                 HHHHHHHHHHHCCCC c1b-4 multi 0.063 0.092 0.147 boundary MID|PLN03088 superfamily; 0.0
4 fp_D Q9UGR2 72 DQVALPRELLCKLHVNR                   CCCCCHHHHHHHHHHHH c1c-4 uniq 0.148 0.089 0.098 boundary MID|PLN03088 superfamily; 0.0
5 fp_D Q9UGR2 82 CKLHVNRAACYFTMGL                  HHHHHHHHHHHHHCCC c1a-AT-4 multi-selected 0.031 0.024 0.068 boundary MID|PLN03088 superfamily; 0.0
6 fp_D Q9UGR2 82 CKLHVNRAACYFTMGL                  HHHHHHHHHHHHHCCC c1d-AT-4 multi 0.031 0.024 0.068 boundary MID|PLN03088 superfamily; 0.0
7 fp_D Q9UGR2 115 SIRALFRKARALNE                CHHHHHHHHHHHHH c3-AT uniq 0.036 0.082 0.215 boundary MID|PLN03088 superfamily; 0.0
8 fp_D Q9UGR2 151 SVTQLGQELAQKLGLRV                   HHHHHHHHHHHHHHHHH c1c-5 uniq 0.2 0.345 0.382 DISO boundary|PLN03088 superfamily; 0.0
9 fp_D Q9UGR2 207 ETGNVPDTREQVEIGA                  CCCCCCCCCCCCCCCC c1d-AT-4 uniq 0.874 0.89 0.632 DISO 0.0
10 fp_D Q9UGR2 241 PTMPLFPHVLDLLAPLDS                    CCCCCCCCCCCCCCCCCC c4-4 multi 0.942 0.838 0.408 DISO 0.0
11 fp_D Q9UGR2 242 TMPLFPHVLDLLAP                CCCCCCCCCCCCCC c3-4 multi-selected 0.944 0.836 0.385 DISO 0.0
12 cand_D Q9UGR2 277 FGPELDTLLDSLSLVQ .......*.*...... CCCCHHHHHHHCCCCC c1a-4 multi-selected 0.843 0.669 0.409 DISO 0.0
13 cand_D Q9UGR2 277 FGPELDTLLDSLSLVQ .......*.*...... CCCCHHHHHHHCCCCC c1d-4 multi 0.843 0.669 0.409 DISO 0.0
14 cand_D Q9UGR2 279 PELDTLLDSLSLVQ .....*.*...... CCHHHHHHHCCCCC c2-AT-4 multi 0.837 0.675 0.406 DISO 0.0
15 fp_D Q9UGR2 280 ELDTLLDSLSLVQG ....*.*....... CHHHHHHHCCCCCC c3-4 multi-selected 0.834 0.679 0.406 DISO 0.0
16 fp_D Q9UGR2 328 VSSPLPPASFGLVMDP                  CCCCCCCCCCCCCCCC c1d-AT-4 uniq 0.844 0.691 0.464 DISO 0.0
17 fp_D Q9UGR2 561 EHQGIFTFLCEICFDS                  HCCCCHHHHHHHHHCC c1a-4 multi-selected 0.051 0.034 0.02 boundary 0.0
18 fp_D Q9UGR2 561 EHQGIFTFLCEICFDS                  HCCCCHHHHHHHHHCC c1d-4 multi 0.051 0.034 0.02 boundary 0.0
19 fp_D Q9UGR2 562 HQGIFTFLCEICFDS                 CCCCHHHHHHHHHCC c1b-4 multi 0.05 0.034 0.019 boundary 0.0
20 fp_D Q9UGR2 563 QGIFTFLCEICFDS                CCCHHHHHHHHHCC c2-AT-4 multi 0.051 0.033 0.019 boundary 0.0
21 fp_D Q9UGR2 617 KYSKIRQFQEHFQFDV                  CCCCCCCCCCCCEEEC c1d-4 uniq 0.12 0.043 0.089 boundary 0.0
22 fp_D Q9UGR2 645 DSCHFAHSFIELKVWL                  CCCCCCCCHHHHHHHH c1a-4 multi-selected 0.018 0.035 0.029 boundary 0.0
23 fp_D Q9UGR2 646 SCHFAHSFIELKVWL                 CCCCCCCHHHHHHHH c1b-AT-4 multi 0.017 0.034 0.027 boundary 0.0
24 fp_D Q9UGR2 894 SGWAFRFPMGEFRLCD                  CCCCEECCCCCEECCC c1a-4 multi-selected 0.026 0.049 0.238 boundary 0.286
25 fp_D Q9UGR2 896 WAFRFPMGEFRLCD                CCEECCCCCEECCC c2-4 multi-selected 0.019 0.042 0.226 boundary 0.286
26 fp_D Q9UGR2 942 LKQKLAKARKDMLLCP                  HHHHHHHHHHCCCCCC c1d-AT-4 uniq 0.281 0.134 0.302 DISO 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment