Q9UQL6 | Histone deacetylase 5   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D Q9UQL6 19 ILPRTSLHSIPVTV                CCCCCCCCCCCCCC c2-AT-5 uniq 0.641 0.965 0.517 DISO 0.0
2 fp_D Q9UQL6 174 KESAIASTEVKLRLQE                  CCCCCCCHHHHHHHHH c1d-AT-4 multi 0.824 0.951 0.477 DISO boundary|ClassIIa_HDAC5_Gln-rich-N; 0.0
3 fp_D Q9UQL6 179 ASTEVKLRLQEFLLSK                  CCHHHHHHHHHHHHHC c1a-4 multi-selected 0.754 0.921 0.483 DISO boundary|ClassIIa_HDAC5_Gln-rich-N; 0.0
4 fp_D Q9UQL6 181 TEVKLRLQEFLLSK                HHHHHHHHHHHHHC c2-4 multi-selected 0.732 0.916 0.469 DISO boundary|ClassIIa_HDAC5_Gln-rich-N; 0.0
5 fp_D Q9UQL6 289 VISTFKKRAVEITG                CCCCCCCCCCCCCC c3-AT uniq 0.935 0.979 0.538 DISO 0.0
6 fp_D Q9UQL6 368 SLPNISLGLQATVTVTN                   CCCCCCCCCCCCCCCCC c1c-5 uniq 0.915 0.941 0.413 DISO 0.0
7 fp_D Q9UQL6 419 STSSIPGCLLGVALEG                  CCCCCCCCCCCCCCCC c1a-4 uniq 0.972 0.91 0.416 DISO 0.0
8 fp_D Q9UQL6 438 PHGHASLLQHVLLLEQ                  CCCCCCHHHHHHHHCC c1d-AT-4 multi-selected 0.968 0.878 0.452 DISO 0.0
9 fp_D Q9UQL6 438 PHGHASLLQHVLLLE                 CCCCCCHHHHHHHHC c1b-AT-4 multi-selected 0.968 0.882 0.466 DISO 0.0
10 fp_D Q9UQL6 530 QLGKILTKTGELPR                HHHCCCCCCCCCCC c3-AT uniq 0.971 0.932 0.728 DISO 0.0
11 fp_D Q9UQL6 640 QVYQAPLSLATVPH                CCCCCCCCCCCCCC c3-AT uniq 0.956 0.926 0.589 DISO 0.0
12 fp_D Q9UQL6 678 KHLFTTGVVYDTFMLKH                   CCCCCCCCCCCHHHHCC c1c-AT-4 multi-selected 0.198 0.374 0.298 DISO boundary|HDAC5; 0.0
13 fp_D Q9UQL6 679 HLFTTGVVYDTFMLKH                  CCCCCCCCCCHHHHCC c1d-AT-5 multi 0.161 0.361 0.282 DISO boundary|HDAC5; 0.0
14 fp_D Q9UQL6 767 LLGPISQKMYAVLP                CCCCCHHHHHHCCC c3-4 uniq 0.613 0.146 0.155 boundary MID|HDAC5; 0.0
15 fp_D Q9UQL6 797 SSSAVRMAVGCLLELAF                   HHHHHHHHHHHHHHHHH c1c-4 multi-selected 0.018 0.019 0.085 boundary MID|HDAC5; 0.0
16 fp_D Q9UQL6 800 AVRMAVGCLLELAFKV                  HHHHHHHHHHHHHHHH c1a-AT-5 multi 0.018 0.016 0.059 boundary MID|HDAC5; 0.0
17 fp_D Q9UQL6 801 VRMAVGCLLELAFKVAA                   HHHHHHHHHHHHHHHHC c1cR-4 multi 0.018 0.016 0.051 boundary MID|HDAC5; 0.0
18 fp_D Q9UQL6 801 VRMAVGCLLELAFKVAA                   HHHHHHHHHHHHHHHHC c1c-4 multi-selected 0.018 0.016 0.051 boundary MID|HDAC5; 0.0
19 fp_D Q9UQL6 801 VRMAVGCLLELAFKV                 HHHHHHHHHHHHHHH c1b-4 multi 0.017 0.016 0.054 boundary MID|HDAC5; 0.0
20 fp_D Q9UQL6 804 AVGCLLELAFKVAA                HHHHHHHHHHHHHC c3-AT multi 0.017 0.016 0.044 boundary MID|HDAC5; 0.0
21 fp_D Q9UQL6 812 AFKVAAGELKNGFAIIR                   HHHHHCCCCCCCEEEEC c1c-AT-5 multi-selected 0.018 0.018 0.166 boundary MID|HDAC5; 0.0
22 fp_D Q9UQL6 813 FKVAAGELKNGFAIIR                  HHHHCCCCCCCEEEEC c1d-AT-4 multi 0.018 0.018 0.173 boundary MID|HDAC5; 0.0
23 fp_D Q9UQL6 836 ESTAMGFCFFNSVAITA                   CCCCCCEEHHHHHHHHH c1c-4 multi-selected 0.025 0.024 0.098 __ MID|HDAC5; 0.25
24 fp_D Q9UQL6 838 TAMGFCFFNSVAITA                 CCCCEEHHHHHHHHH c1b-4 multi 0.017 0.017 0.082 __ MID|HDAC5; 0.286
25 fp_D Q9UQL6 844 FFNSVAITAKLLQQ                HHHHHHHHHHHHHH c3-AT multi 0.013 0.009 0.039 __ MID|HDAC5; 0.0
26 fp_D Q9UQL6 847 SVAITAKLLQQKLNVGK                   HHHHHHHHHHHHCCCCE c1c-AT-5 multi-selected 0.013 0.011 0.042 __ MID|HDAC5; 0.0
27 fp_D Q9UQL6 848 VAITAKLLQQKLNVGK                  HHHHHHHHHHHCCCCE c1d-AT-4 multi 0.013 0.011 0.042 __ MID|HDAC5; 0.0
28 fp_O Q9UQL6 855 LQQKLNVGKVLIVD                HHHHCCCCEEEEEE c2-4 uniq 0.013 0.01 0.079 ORD MID|HDAC5; 0.286
29 fp_O Q9UQL6 934 DVEYLTAFRTVVMPI                 CHHHHHHHHHHHCCC c1b-5 multi-selected 0.01 0.01 0.106 ORD MID|HDAC5; 0.0
30 fp_O Q9UQL6 935 VEYLTAFRTVVMPI                HHHHHHHHHHHCCC c2-AT-4 multi-selected 0.01 0.009 0.102 ORD MID|HDAC5; 0.0
31 fp_O Q9UQL6 937 YLTAFRTVVMPIAH                HHHHHHHHHCCCCC c2-AT-5 multi-selected 0.01 0.008 0.088 ORD MID|HDAC5; 0.0
32 fp_O Q9UQL6 955 DVVLVSAGFDAVEG                CEEEECCCCCCCCC c3-4 uniq 0.016 0.024 0.124 ORD MID|HDAC5; 0.286
33 fp_O Q9UQL6 979 TARCFGHLTRQLMTLAG                   CCCHHHHHHHHHHCCCC c1c-AT-4 multi 0.029 0.012 0.117 ORD MID|HDAC5; 0.0
34 fp_O Q9UQL6 982 CFGHLTRQLMTLAG                HHHHHHHHHHCCCC c3-4 multi-selected 0.031 0.011 0.113 ORD MID|HDAC5; 0.0
35 fp_D Q9UQL6 986 LTRQLMTLAGGRVVLAL                   HHHHHHCCCCCCEEEEC c1c-AT-4 multi 0.026 0.011 0.139 boundary MID|HDAC5; 0.0
36 fp_D Q9UQL6 987 TRQLMTLAGGRVVLAL                  HHHHHCCCCCCEEEEC c1d-AT-4 multi 0.026 0.011 0.141 boundary MID|HDAC5; 0.0
37 fp_D Q9UQL6 1015 SEACVSALLSVELQP                 HHHHHHHHCCCCCCC c1b-4 uniq 0.182 0.036 0.142 boundary MID|HDAC5; 0.0
38 fp_D Q9UQL6 1039 PNINAVATLEKVIEIQS                   CCHHHHHHHHHHHHHHH c1c-AT-4 multi-selected 0.053 0.062 0.232 boundary MID|HDAC5; 0.0
39 fp_D Q9UQL6 1040 NINAVATLEKVIEIQS                  CHHHHHHHHHHHHHHH c1d-5 multi 0.043 0.06 0.222 boundary MID|HDAC5; 0.0
40 cand_D Q9UQL6 1079 ETEEAETVSAMALLS   .....*....**. CCCHHHHHHHCCCCC c1b-AT-4 multi 0.95 0.872 0.485 DISO boundary|HDAC5; 0.0
41 cand_D Q9UQL6 1081 EEAETVSAMALLSVGA .....*....**.... CHHHHHHHCCCCCCCH c1a-AT-4 multi-selected 0.943 0.876 0.438 DISO boundary|HDAC5; 0.0
42 cand_D Q9UQL6 1082 EAETVSAMALLSVGA ....*....**.... HHHHHHHCCCCCCCH c1b-4 multi 0.942 0.876 0.431 DISO boundary|HDAC5; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment