1. d.142.1 Glutathione synthetase ATP-binding domain-like ATP-grasp Consists of two subdomains with different alpha+beta folds ! shares functional and structural similarities with the PIPK and protein kinase superfamilies 1gso d1gsoa3 A:121-126,127-139,160-173 1i7n d1i7na2 A:249-255,255-262,285-300 1i7n d1i7nb2 B:249-255,255-262,285-300 1i7l d1i7lb2 B:249-255,255-262,285-300 1glv d1glva2 A:137-142,143-155,177-189 1ehi d1ehib2 B:552-558,557-565,595-611 1i7l d1i7la2 A:250-255,255-262,285-300 1gsh d1gsha2 A:137-142,143-155,177-189 1a9x d1a9xe5 E:4145-4150,4151-4163,4184-4200 2glt d2glta2 A:137-142,143-155,177-189 1a9x d1a9xa5 A:145-150,151-163,184-200 1jdb d1jdbe5 E:144-149,150-162,183-199 1vkz d1vkzb3 B:111-116,117-129,150-164 1c30 d1c30g5 G:145-150,151-163,184-200 1m6v d1m6vg5 G:145-150,151-163,184-200 1vkz d1vkza3 A:111-116,117-129,150-164 1a9x d1a9xg5 G:6145-6150,6151-6163,6184-6200 1c30 d1c30a5 A:145-150,151-163,184-200 1kee d1keeg5 G:145-150,151-163,184-200 1t36 d1t36e5 E:145-150,151-163,184-200 1m6v d1m6va5 A:145-150,151-163,184-200 1ce8 d1ce8e5 E:145-150,151-163,184-200 1ce8 d1ce8g5 G:145-150,151-163,184-200 1c30 d1c30e5 E:145-150,151-163,184-200 1jdb d1jdbk5 K:144-149,150-162,183-199 1bxr d1bxra5 A:145-150,151-163,184-200 1m6v d1m6ve5 E:145-150,151-163,184-200 1t36 d1t36a5 A:145-150,151-163,184-200 1cs0 d1cs0g5 G:145-150,151-163,184-200 1cs0 d1cs0a5 A:145-150,151-163,184-200 1ce8 d1ce8a5 A:145-150,151-163,184-200 1c3o d1c3oa5 A:145-150,151-163,184-200 1a9x d1a9xc5 C:2145-2150,2151-2163,2184-2200 1cs0 d1cs0e5 E:145-150,151-163,184-200 1kee d1keee5 E:145-150,151-163,184-200 1c3o d1c3oe5 E:145-150,151-163,184-200 1kee d1keea5 A:145-150,151-163,184-200 1c3o d1c3og5 G:145-150,151-163,184-200 1t36 d1t36g5 G:145-150,151-163,184-200 1ehi d1ehia2 A:152-157,157-165,195-211 1jdb d1jdbh5 H:144-149,150-162,183-199 1t36 d1t36c5 C:145-150,151-163,184-200 1bxr d1bxre5 E:145-150,151-163,184-200 1cs0 d1cs0c5 C:145-150,151-163,184-200 1c3o d1c3oc5 C:145-150,151-163,184-200 1bxr d1bxrc5 C:145-150,151-163,184-200 1kee d1keec5 C:145-150,151-163,184-200 1jdb d1jdbb5 B:144-149,150-162,183-199 1m6v d1m6vc5 C:145-150,151-163,184-200 1c30 d1c30c5 C:145-150,151-163,184-200 1ce8 d1ce8c5 C:145-150,151-163,184-200 1bxr d1bxrg5 G:145-150,151-163,184-200 2scu d2scub2 B:21-26,27-39,65-77 2nu9 d2nu9e2 E:21-26,27-39,65-77 2nu9 d2nu9g2 G:21-26,27-39,65-77 2nu9 d2nu9i2 I:21-26,27-39,65-77 2nu9 d2nu9b2 B:21-26,27-39,65-77 1bxr d1bxra6 A:792-797,923-936,1043-1056 1kjj d1kjja3 A:131-136,137-149,170-184 1jll d1jllb2 B:21-26,27-39,65-77 2nu8 d2nu8b2 B:21-26,27-39,65-77 1jkj d1jkjb2 B:21-26,27-39,65-77 1jkj d1jkje2 E:21-26,27-39,65-77 2nua d2nuae2 E:21-26,27-39,65-77 2nua d2nuab2 B:21-26,27-39,65-77 2nu8 d2nu8e2 E:21-26,27-39,65-77 1kjq d1kjqb3 B:131-136,137-149,170-184 1kj8 d1kj8a3 A:131-136,137-149,170-184 1kjj d1kjjb3 B:131-136,137-149,170-183 1jll d1jlle2 E:21-26,27-39,65-77 1kj9 d1kj9a3 A:131-136,137-149,170-184 2scu d2scue2 E:21-26,27-39,65-77 1cqi d1cqib2 B:21-26,27-39,65-77 1cqi d1cqie2 E:21-26,27-39,65-77 2nu6 d2nu6b2 B:21-26,27-39,65-77 1cqj d1cqjb2 B:21-26,27-39,65-77 1kjq d1kjqa3 A:131-136,137-149,170-185 1cqj d1cqje2 E:21-26,27-39,65-77 2nu7 d2nu7b2 B:21-26,27-39,65-77 2nu7 d2nu7e2 E:21-26,27-39,65-77 2nu6 d2nu6e2 E:21-26,27-39,65-77 1ez1 d1ez1a3 A:131-136,137-149,170-185 1scu d1scub2 B:21-26,27-39,65-77 2fpi d2fpib2 B:21-26,27-39,72-85 2fpg d2fpgb2 B:21-26,27-39,72-85 2fp4 d2fp4b2 B:21-26,27-39,72-85 1iow d1iowa2 A:113-118,127-138,159-175 1eyz d1eyza3 A:131-136,137-149,170-185 1euc d1eucb2 B:21-26,27-39,72-84 2fpp d2fppb2 B:21-26,27-39,72-84 1eud d1eudb2 B:21-26,27-39,72-84 1gsa d1gsaa2 A:137-142,143-155,179-189 1kji d1kjia3 A:131-136,137-149,170-185 1scu d1scue2 E:21-26,27-39,65-77 1kji d1kjib3 B:131-136,137-149,170-187 1ce8 d1ce8g6 G:792-797,923-936,1043-1057 1jdb d1jdbk6 K:791-796,922-935,1042-1056 1c3o d1c3oe6 E:792-797,923-936,1043-1057 1a9x d1a9xc6 C:2792-2797,2923-2936,3043-3057 2dln d2dlna2 A:113-118,127-138,159-175 1c30 d1c30c6 C:792-797,923-936,1043-1057 1kee d1keec6 C:792-797,923-936,1043-1057 1a9x d1a9xe6 E:4792-4797,4923-4936,5043-5057 1c30 d1c30e6 E:792-797,923-936,1043-1057 1ce8 d1ce8e6 E:792-797,923-936,1043-1057 1m6v d1m6vg6 G:792-797,923-936,1043-1057 1vbg d1vbga3 A:254-262,293-302,301-320 1kee d1keea6 A:792-797,923-936,1043-1057 1jde d1jdea3 A:251-259,290-299,298-317 1t36 d1t36a6 A:792-797,923-936,1043-1057 1kee d1keee6 E:792-797,923-936,1043-1057 1c3o d1c3oc6 C:792-797,923-936,1043-1057 1cs0 d1cs0e6 E:792-797,923-936,1043-1057 1bxr d1bxre6 E:792-797,923-936,1043-1057 1cs0 d1cs0c6 C:792-797,923-936,1043-1057 1m6v d1m6vc6 C:792-797,923-936,1043-1057 1m6v d1m6va6 A:792-797,923-936,1043-1057 1cs0 d1cs0a6 A:792-797,923-936,1043-1057 1cs0 d1cs0g6 G:792-797,923-936,1043-1057 1iov d1iova2 A:113-118,127-138,159-175 1jdb d1jdbb6 B:791-796,922-935,1042-1056 1c3o d1c3oa6 A:792-797,923-936,1043-1057 2fpi d2fpib2 B:111-122,163-175,177-199 1kj8 d1kj8b3 B:131-136,137-149,170-182 1bxr d1bxrc6 C:792-797,923-936,1043-1057 1vbh d1vbha3 A:254-262,293-302,301-320 1a9x d1a9xg6 G:6792-6797,6923-6936,7043-7057 1t36 d1t36e6 E:792-797,923-936,1043-1057 1t36 d1t36c6 C:792-797,923-936,1043-1057 1c3o d1c3og6 G:792-797,923-936,1043-1057 1c30 d1c30g6 G:792-797,923-936,1043-1057 2fpp d2fppb2 B:111-122,163-175,177-199 1m6v d1m6ve6 E:792-797,923-936,1043-1057 1jdb d1jdbh6 H:791-796,922-935,1042-1056 1dik d1dika3 A:251-259,290-299,298-317 1a9x d1a9xa6 A:792-797,923-936,1043-1057 1ce8 d1ce8a6 A:792-797,923-936,1043-1057 1c30 d1c30a6 A:792-797,923-936,1043-1057 1jdb d1jdbe6 E:791-796,922-935,1042-1056 1ce8 d1ce8c6 C:792-797,923-936,1043-1057 1bxr d1bxrg6 G:792-797,923-936,1043-1057 1t36 d1t36g6 G:792-797,923-936,1043-1057 1kee d1keeg6 G:792-797,923-936,1043-1057 2scu d2scub2 B:144-149,156-168,170-192 2nu6 d2nu6b2 B:144-149,156-168,170-192 1scu d1scub2 B:144-149,156-168,170-192 1jkj d1jkjb2 B:144-149,156-168,170-192 2r7l d2r7la2 A:165-170,171-186,189-196 2nua d2nuab2 B:144-149,156-168,170-192 2nu6 d2nu6e2 E:144-149,156-168,170-192 2nu7 d2nu7b2 B:144-149,156-168,170-192 2nua d2nuae2 E:144-149,156-168,170-192 1cs0 d1cs0a5 A:247-252,390-403,432-446 1scu d1scue2 E:144-149,156-168,170-192 2nu9 d2nu9b2 B:144-149,156-168,170-192 2scu d2scue2 E:144-149,156-168,170-192 1jll d1jllb2 B:144-149,156-168,170-192 2nu9 d2nu9e2 E:144-149,156-168,170-192 2nu9 d2nu9i2 I:144-149,156-168,170-192 2nu9 d2nu9g2 G:144-149,156-168,170-192 1ce8 d1ce8e5 E:247-252,390-403,432-446 2nu8 d2nu8b2 B:144-149,156-168,170-192 2r7m d2r7ma2 A:165-170,171-186,189-196 1jdb d1jdbe5 E:246-251,389-402,431-445 1jdb d1jdbk5 K:246-251,389-402,431-445 1cs0 d1cs0e5 E:247-252,390-403,432-446 1cqj d1cqje2 E:144-149,156-168,170-192 1cqj d1cqjb2 B:144-149,156-168,170-192 2nu7 d2nu7e2 E:144-149,156-168,170-192 1jkj d1jkje2 E:144-149,156-168,170-192 1m6v d1m6ve5 E:247-252,390-403,432-446 1cs0 d1cs0g5 G:247-252,390-403,432-446 1c3o d1c3og5 G:247-252,390-403,432-446 1jdb d1jdbb5 B:246-251,389-402,431-445 1c3o d1c3oe5 E:247-252,390-403,432-446 1bxr d1bxre5 E:247-252,390-403,432-446 1cs0 d1cs0c5 C:247-252,390-403,432-446 1a9x d1a9xa5 A:247-252,390-403,432-446 1m6v d1m6vg5 G:247-252,390-403,432-446 2nu8 d2nu8e2 E:144-149,156-168,170-192 1bxr d1bxra5 A:247-252,390-403,432-446 1c3o d1c3oa5 A:247-252,390-403,432-446 1jll d1jlle2 E:144-149,156-168,170-192 1c30 d1c30e5 E:247-252,390-403,432-446 1kee d1keea5 A:247-252,390-403,432-446 1a9x d1a9xe5 E:4247-4252,4390-4403,4432-4446 1m6v d1m6va5 A:247-252,390-403,432-446 1jdb d1jdbk6 K:690-695,696-708,729-740 1c30 d1c30g5 G:247-252,390-403,432-446 1t36 d1t36e5 E:247-252,390-403,432-446 2dik d2dika3 A:250-259,290-299,298-317 1ce8 d1ce8g5 G:247-252,390-403,432-446 1ggo d1ggoa3 A:250-259,290-299,298-317 1c3o d1c3oc5 C:247-252,390-403,432-446 1ce8 d1ce8a5 A:247-252,390-403,432-446 1a9x d1a9xg5 G:6247-6252,6390-6403,6432-6446 1t36 d1t36a5 A:247-252,390-403,432-446 1c30 d1c30c5 C:247-252,390-403,432-446 1ce8 d1ce8c5 C:247-252,390-403,432-446 1t36 d1t36c5 C:247-252,390-403,432-446 1a9x d1a9xc5 C:2247-2252,2390-2403,2432-2446 1kbl d1kbla3 A:250-259,290-299,298-317 1kee d1keee5 E:247-252,390-403,432-446 1kee d1keec5 C:247-252,390-403,432-446 1t36 d1t36g5 G:247-252,390-403,432-446 1bxr d1bxrg5 G:247-252,390-403,432-446 1kc7 d1kc7a3 A:250-259,290-299,298-317 1m6v d1m6vc5 C:247-252,390-403,432-446 1cqi d1cqib2 B:144-149,156-168,170-192 1kee d1keeg5 G:247-252,390-403,432-446 1cqi d1cqie2 E:144-149,156-168,170-192 1jdb d1jdbh5 H:246-251,389-402,431-445 2r7k d2r7ka2 A:165-170,171-186,189-196 2fpg d2fpgb2 B:110-123,163-175,177-199 2r82 d2r82a3 A:250-259,290-299,298-317 1bxr d1bxrc5 C:247-252,390-403,432-446 2fp4 d2fp4b2 B:110-123,163-175,177-199 1euc d1eucb2 B:110-123,163-175,177-199 2nu6 d2nu6e2 E:103-114,156-168,170-192 2nu6 d2nu6b2 B:103-114,156-168,170-192 2nua d2nuab2 B:103-117,156-168,170-192 1jll d1jllb2 B:103-116,156-168,170-192 1eud d1eudb2 B:110-123,163-175,177-199 1jll d1jlle2 E:103-116,156-168,170-192 1jkj d1jkjb2 B:103-114,156-168,170-192 1jkj d1jkje2 E:103-114,156-168,170-192 2nu7 d2nu7b2 B:103-114,156-168,170-192 2nu7 d2nu7e2 E:103-114,156-168,170-192 2nu8 d2nu8e2 E:103-114,156-168,170-192 2nu8 d2nu8b2 B:103-114,156-168,170-192 2scu d2scue2 E:103-117,156-168,170-192 1cqj d1cqje2 E:103-116,156-168,170-192 1cqj d1cqjb2 B:103-116,156-168,170-192 1cqi d1cqib2 B:103-117,156-168,170-192 1scu d1scue2 E:103-117,156-168,170-192 1cqi d1cqie2 E:103-117,156-168,170-192 2nua d2nuae2 E:103-114,156-168,170-192 1jdb d1jdbb6 B:912-921,922-935,1042-1056 1scu d1scub2 B:103-116,156-168,170-192 2scu d2scub2 B:103-114,156-168,170-192 1bxr d1bxre6 E:913-922,923-936,1043-1057 1ce8 d1ce8e6 E:913-922,923-936,1043-1057 1cs0 d1cs0g6 G:913-922,923-936,1043-1057 1cs0 d1cs0a6 A:913-922,923-936,1043-1057 2nu9 d2nu9i2 I:103-114,156-168,170-192 1kee d1keee6 E:913-922,923-936,1043-1057 1c3o d1c3oe6 E:913-922,923-936,1043-1057 2nu9 d2nu9b2 B:103-114,156-168,170-192 1jdb d1jdbk6 K:912-921,922-935,1042-1056 2nu9 d2nu9e2 E:103-114,156-168,170-192 2nu9 d2nu9g2 G:103-114,156-168,170-192 1ce8 d1ce8g6 G:913-922,923-936,1043-1057 1c30 d1c30g6 G:913-922,923-936,1043-1057 1kee d1keea6 A:913-922,923-936,1043-1057 1c30 d1c30e6 E:913-922,923-936,1043-1057 1kee d1keeg6 G:913-922,923-936,1043-1057 1c3o d1c3og6 G:913-922,923-936,1043-1057 1kee d1keec6 C:913-922,923-936,1043-1057 1cs0 d1cs0c6 C:913-922,923-936,1043-1057 1cs0 d1cs0e6 E:913-922,923-936,1043-1057 1c3o d1c3oa6 A:913-922,923-936,1043-1057 1a9x d1a9xe6 E:4913-4922,4923-4936,5043-5057 1m6v d1m6va6 A:913-922,923-936,1043-1057 1m6v d1m6vg6 G:913-922,923-936,1043-1057 1a9x d1a9xa6 A:913-922,923-936,1043-1057 1t36 d1t36g6 G:913-922,923-936,1043-1057 1bxr d1bxrc6 C:913-922,923-936,1043-1057 1c30 d1c30a6 A:913-922,923-936,1043-1057 1c30 d1c30c6 C:913-922,923-936,1043-1057 1a9x d1a9xc6 C:2913-2922,2923-2936,3043-3057 1jdb d1jdbh6 H:912-921,922-935,1042-1056 1ce8 d1ce8a6 A:913-922,923-936,1043-1057 1jdb d1jdbe6 E:912-921,922-935,1042-1056 1t36 d1t36e6 E:913-922,923-936,1043-1057 1m6v d1m6ve6 E:913-922,923-936,1043-1057 1m6v d1m6vc6 C:913-922,923-936,1043-1057 1c3o d1c3oc6 C:913-922,923-936,1043-1057 1a9x d1a9xg6 G:6913-6922,6923-6936,7043-7057 1ce8 d1ce8c6 C:913-922,923-936,1043-1057 1t36 d1t36a6 A:913-922,923-936,1043-1057 2dik d2dika3 A:38-43,58-77,199-217 1bxr d1bxrg6 G:913-922,923-936,1043-1057 1t36 d1t36c6 C:913-922,923-936,1043-1057 1kc7 d1kc7a3 A:38-43,58-77,199-217 1vbh d1vbha3 A:43-48,63-82,202-220 1vbg d1vbga3 A:43-48,63-82,202-220 1dik d1dika3 A:38-43,58-77,199-217 1kbl d1kbla3 A:38-43,58-77,199-217 1ggo d1ggoa3 A:38-43,58-77,199-217 2r7n d2r7na2 A:166-170,171-186,189-196 1jde d1jdea3 A:39-43,58-77,199-217 2r82 d2r82a3 A:38-43,58-77,199-217 1kj9 d1kj9b3 B:131-136,137-149,173-185 1eyz d1eyzb3 B:131-136,137-149,173-185 1ez1 d1ez1b3 B:130-136,137-149,173-185 1bxr d1bxre6 E:691-696,697-709,737-746 1bxr d1bxra6 A:691-696,697-709,737-746 1bxr d1bxrc6 C:691-696,697-709,737-746 1bxr d1bxrg6 G:691-696,697-709,737-746 4. d.342.1 PH1570-like PH1570-like duplication: two beta(4)-alpha structural repeats, related by pseudo twofold symmetry; two extra helices in the linker region; single 8-standed antiparallel beta-sheet, order: 12348765 2hq4 d2hq4b1 B:6-11,30-43,51-62 2hq4 d2hq4a1 A:6-11,30-43,51-62 5. b.57.1 Herpes virus serine proteinase, assemblin Herpes virus serine proteinase, assemblin core: barrel, closed; n=7, S=8; complex topology 1lay d1laya_ A:80-90,176-185,188-203 1fl1 d1fl1b_ B:63-73,153-161,165-180 1nkk d1nkkd_ D:1380-1390,1476-1485,1488-1500 1vzv d1vzva_ A:69-78,158-167,170-185 1nkk d1nkkb_ B:380-390,476-485,488-503 1nkk d1nkkc_ C:1080-1090,1176-1185,1188-1202 2pbk d2pbkb1 B:63-73,153-161,165-180 1njt d1njta_ A:80-90,176-185,188-203 1njt d1njtb_ B:380-390,476-485,488-502 1fl1 d1fl1a_ A:63-73,153-161,165-180 2pbk d2pbka1 A:63-73,153-161,165-180 1nkk d1nkka_ A:80-90,176-185,188-201 1iec d1ieca_ A:80-90,176-185,188-200 1njt d1njtd_ D:1380-1390,1476-1485,1488-1500 1njt d1njtc_ C:1080-1090,1176-1185,1188-1200 1ief d1iefa_ A:80-90,176-185,188-200 1nju d1njua_ A:80-90,176-185,188-200 1id4 d1id4a_ A:80-90,176-185,188-200 1nju d1njub_ B:380-390,476-485,488-500 1iec d1iecb_ B:380-390,476-485,488-501 1id4 d1id4b_ B:380-390,476-485,488-501 1ieg d1iega_ A:80-90,176-185,188-200 1at3 d1at3b_ B:78-87,167-175,179-198 1jq6 d1jq6a_ A:80-90,176-185,188-202 1ied d1iedb_ B:380-390,476-485,488-501 1cmv d1cmva_ A:80-90,176-185,188-199 1ieg d1iegb_ B:380-390,476-485,488-503 1at3 d1at3a_ A:78-87,167-175,179-198 1nkm d1nkma_ A:80-90,176-185,188-200 1wpo d1wpoa_ A:80-90,176-185,188-201 1nju d1njuc_ C:1080-1090,1176-1185,1188-1200 1cmv d1cmvb_ B:80-90,176-185,188-201 1ief d1iefb_ B:380-390,476-485,488-501 1nju d1njud_ D:1380-1390,1476-1485,1488-1500 1ied d1ieda_ A:80-90,176-185,188-200 1wpo d1wpob_ B:80-90,176-185,188-201 2wpo d2wpob_ B:80-90,176-185,188-200 1nkm d1nkmb_ B:380-390,476-485,488-500 1jq7 d1jq7b_ B:1380-1390,1476-1485,1488-1500 2wpo d2wpoc_ C:80-90,176-185,188-200 2wpo d2wpod_ D:80-90,176-185,188-200 2wpo d2wpoa_ A:80-90,176-185,188-200 1jq7 d1jq7a_ A:1080-1090,1176-1185,1188-1199 1o6e d1o6eb_ B:65-75,158-167,170-187 1o6e d1o6ea_ A:65-75,158-167,170-186 7. d.58.62 Ribosomal protein L10-like consists of globular N-terminal domain, structurally similar to NDK, and the L7/L12-binding C-terminal alpha-helical tail Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1zav d1zava1 A:21-28,58-70,71-79 1zaw d1zawa1 A:21-28,58-70,73-81 8. c.45.1 (Phosphotyrosine protein) phosphatases II share with the family I the common active site structure with a circularly permuted topology ! (Phosphotyrosine protein) phosphatases II core: 3 layers, a/b/a; parallel beta-sheet of 4 strands, order 1423 1zsq d1zsqa2 A:277-286,422-437,441-456 1m7r d1m7ra2 A:277-286,422-437,441-456 1zvr d1zvra2 A:277-286,422-437,441-456 1m7r d1m7rb2 B:277-286,422-437,441-456 1ywf d1ywfa1 A:26-32,162-179,181-196 1lw3 d1lw3a2 A:278-286,422-437,441-456 2oz5 d2oz5a1 A:26-32,162-179,181-196 1rxd d1rxdc_ C:15-21,107-122,124-137 1rxd d1rxdb_ B:15-21,107-122,124-137 2oz5 d2oz5b1 B:26-32,162-179,181-196 1rxd d1rxda_ A:15-21,107-122,124-137 1lyv d1lyva_ A:253-260,405-422,428-441 1qz0 d1qz0a_ A:253-260,405-422,428-441 1qz0 d1qz0b_ B:253-260,405-422,428-441 1pa9 d1pa9a_ A:91-98,243-260,266-279 3blu d3blua1 A:253-260,405-422,428-441 1xxv d1xxvb1 B:253-260,405-422,428-441 1xxv d1xxva1 A:253-260,405-422,428-441 1ytn d1ytna_ A:253-260,405-422,428-441 2i42 d2i42a1 A:253-260,405-422,428-441 1ytw d1ytwa_ A:253-260,405-422,428-441 1yts d1ytsa_ A:253-260,405-422,428-441 1xxp d1xxpa1 A:253-260,405-422,428-441 1xxp d1xxpb1 B:253-260,405-422,428-441 1ypt d1ypta_ A:253-260,405-422,428-441 1r6h d1r6ha_ A:19-26,112-126,127-140 1ypt d1yptb_ B:253-260,405-422,428-441 1ohd d1ohda1 A:55-62,125-145,147-159 1ohc d1ohca1 A:55-62,125-145,147-159 1g4w d1g4wr2 R:340-347,483-501,504-517 1g4u d1g4us2 S:340-347,483-501,504-517 1fpz d1fpzd_ D:40-46,142-160,163-176 1ohe d1ohea1 A:55-62,125-145,147-159 2q47 d2q47a1 A:65-71,152-169,171-184 1wch d1wcha_ A:2274-2283,2410-2431,2435-2448 1i9t d1i9ta_ A:23-28,131-146,148-161 1i9s d1i9sa_ A:23-28,131-146,148-161 1fpz d1fpzb_ B:40-48,142-160,163-176 1vhr d1vhra_ A:36-41,129-144,146-159 1oes d1oesa_ A:77-85,220-238,245-258 1oeu d1oeua_ A:77-85,217-238,245-258 1j4x d1j4xa_ A:36-41,126-144,146-159 1mkp d1mkpa_ A:213-217,296-313,315-328 2q47 d2q47b1 B:65-71,152-169,171-184 1i57 d1i57a_ A:77-86,220-238,245-258 1vhr d1vhrb_ B:36-41,126-144,146-159 1nwl d1nwla_ A:77-85,217-238,245-258 1no6 d1no6a_ A:77-85,217-238,245-258 1onz d1onza_ A:77-85,217-238,245-258 1l8k d1l8ka_ A:79-87,221-240,243-256 1xri d1xria_ A:65-71,152-169,171-184 1oeo d1oeox_ X:77-85,217-238,245-258 1t4j d1t4ja_ A:77-85,217-238,245-258 1xri d1xrib_ B:65-71,152-169,171-184 1oet d1oeta_ A:77-85,217-238,245-258 1eeo d1eeoa_ A:78-85,217-238,245-258 1t49 d1t49a_ A:77-85,217-238,245-258 1oev d1oeva_ A:77-85,217-238,245-258 1c84 d1c84a_ A:77-85,217-239,245-258 2cma d2cmaa1 A:77-85,217-238,245-258 1nny d1nnya_ A:77-85,217-238,245-258 1pyn d1pyna_ A:77-85,217-238,245-258 2cmc d2cmca1 A:77-85,217-238,245-258 1nl9 d1nl9a_ A:77-85,217-238,245-258 1qxk d1qxka_ A:77-85,217-238,245-258 2cm7 d2cm7a1 A:78-85,217-238,245-258 1bzh d1bzha_ A:77-85,217-238,245-258 1ph0 d1ph0a_ A:77-85,217-238,245-258 2b4s d2b4sa1 A:77-85,217-238,245-258 2cnf d2cnfa1 A:77-85,217-238,245-258 2cmb d2cmba1 A:77-85,217-238,245-258 1fq1 d1fq1a_ A:41-46,142-160,163-176 1lqf d1lqfc_ C:577-585,717-738,745-758 1wax d1waxa1 A:77-85,217-239,245-258 2cne d2cnea1 A:77-85,217-238,245-258 1d5r d1d5ra2 A:31-37,127-143,147-161 2cnh d2cnha1 A:77-85,217-238,245-258 1q1m d1q1ma_ A:77-85,217-239,245-258 2hnq d2hnqa_ A:77-85,217-239,245-258 1xbo d1xboa_ A:77-85,217-239,245-258 1pa1 d1pa1a_ A:577-585,717-739,745-758 1l8g d1l8ga_ A:77-85,217-239,245-258 1sug d1suga_ A:77-85,217-239,245-258 1c83 d1c83a_ A:77-85,217-239,245-258 2f6z d2f6za1 A:77-85,217-239,245-258 2azr d2azra1 A:77-85,217-239,245-258 1c85 d1c85a_ A:77-85,217-239,245-258 1gfy d1gfya_ A:77-85,217-239,245-258 2f6v d2f6va1 A:77-85,217-239,245-258 1fpz d1fpzf_ F:41-46,142-160,163-176 2f71 d2f71a1 A:77-85,217-239,245-258 2cm8 d2cm8a1 A:77-85,217-239,245-258 1bzc d1bzca_ A:77-85,217-238,245-258 2hb1 d2hb1a1 A:77-85,217-239,245-258 1een d1eena_ A:77-85,217-238,245-258 2f6y d2f6ya1 A:77-85,217-239,245-258 1a5y d1a5ya_ A:77-85,217-239,245-258 2f6t d2f6ta1 A:77-85,217-239,245-258 1ohe d1ohea2 A:223-228,316-334,336-349 1fpz d1fpzc_ C:41-46,142-160,163-176 1pty d1ptya_ A:77-85,217-239,245-258 2bgd d2bgda1 A:77-85,217-239,245-258 2b07 d2b07a1 A:77-85,217-239,245-258 1c87 d1c87a_ A:77-85,217-239,245-258 1ecv d1ecva_ A:77-85,217-239,245-258 1c86 d1c86a_ A:77-86,217-239,245-258 1bzj d1bzja_ A:77-85,217-239,245-258 2cni d2cnia1 A:77-85,217-238,245-258 1aax d1aaxa_ A:77-86,217-239,245-258 2h4g d2h4ga1 A:77-85,217-239,245-258 1c88 d1c88a_ A:77-85,217-239,245-258 1nwe d1nwea_ A:77-85,217-239,245-258 2f70 d2f70a1 A:77-85,217-239,245-258 2h4k d2h4ka1 A:77-85,217-239,245-258 1ptt d1ptta_ A:77-85,217-239,245-258 2f6w d2f6wa1 A:77-85,217-239,245-258 1ptv d1ptva_ A:77-85,217-239,245-258 1fpz d1fpze_ E:41-48,142-160,163-176 1ptu d1ptua_ A:77-85,217-239,245-258 2bge d2bgea1 A:77-85,217-239,245-258 1fpz d1fpza_ A:41-48,142-160,163-176 2cng d2cnga1 A:77-85,217-239,245-258 1kak d1kaka_ A:78-85,217-239,245-258 2cm3 d2cm3b1 B:77-85,217-239,245-258 1ohd d1ohda2 A:223-228,316-334,336-349 1g7f d1g7fa_ A:77-85,217-239,245-258 1lar d1lara1 A:1393-1398,1524-1546,1549-1562 1ony d1onya_ A:77-85,217-239,245-258 1nz7 d1nz7a_ A:77-85,217-239,245-258 1t48 d1t48a_ A:77-85,217-239,245-258 1q6n d1q6na_ A:577-585,717-739,745-758 1q6s d1q6sb_ B:1077-1085,1217-1239,1245-1258 1kav d1kava_ A:77-85,217-239,245-258 1lqf d1lqfd_ D:577-585,717-739,745-758 1g7g d1g7ga_ A:77-85,217-239,245-258 1jf7 d1jf7a_ A:78-85,217-239,245-258 2pt0 d2pt0a1 A:101-107,256-272,275-287 1pxh d1pxha_ A:77-85,217-239,245-258 2pt0 d2pt0b1 B:101-107,256-272,275-287 1q6p d1q6pa_ A:577-585,717-739,745-758 2cm2 d2cm2a1 A:77-85,217-239,245-258 1q6s d1q6sa_ A:577-585,717-739,745-758 1lqf d1lqfb_ B:577-585,717-739,745-758 1q6j d1q6ja_ A:77-85,217-239,245-258 1lqf d1lqfa_ A:577-585,717-739,745-758 1q6m d1q6ma_ A:77-85,217-239,245-258 1q6n d1q6nb_ B:1077-1085,1217-1239,1245-1258 1q6p d1q6pb_ B:1077-1085,1217-1239,1245-1258 1q6t d1q6tb_ B:1077-1085,1217-1239,1245-1258 1q6t d1q6ta_ A:577-585,717-739,745-758 1g1f d1g1fa_ A:77-85,217-239,245-258 2cm3 d2cm3a1 A:77-85,217-239,245-258 1g1g d1g1ga_ A:77-85,217-239,245-258 1lar d1larb1 B:1393-1398,1524-1546,1549-1562 1g1h d1g1ha_ A:77-85,217-239,245-258 1jf7 d1jf7b_ B:77-85,217-239,245-258 1ohc d1ohca2 A:223-229,316-334,336-349 1u24 d1u24a_ A:90-96,245-261,264-276 1u25 d1u25a_ A:90-96,243-261,264-276 1u25 d1u25c_ C:90-96,243-261,264-276 1u24 d1u24b_ B:90-96,245-261,264-276 1u25 d1u25b_ B:90-96,243-261,264-276 1u26 d1u26a_ A:90-96,243-261,264-276 1u26 d1u26b_ B:90-96,243-261,264-276 3d1h d3d1hb1 B:101-107,254-272,275-287 3d1h d3d1ha1 A:101-107,254-272,275-287 2psz d2pszb1 B:101-107,254-272,275-287 3d1q d3d1qb1 B:101-107,254-272,275-287 1p15 d1p15a_ A:594-600,726-748,751-764 3d1q d3d1qa1 A:101-107,254-272,275-287 2psz d2psza1 A:101-107,254-272,275-287 3d1o d3d1oa1 A:101-107,254-272,275-287 1jln d1jlna_ A:353-358,482-504,507-520 3d1o d3d1ob1 B:101-107,254-272,275-287 1rpm d1rpmb_ B:967-973,1097-1119,1122-1135 1rpm d1rpma_ A:967-973,1097-1119,1122-1135 1p15 d1p15b_ B:594-600,726-748,751-764 1fpr d1fpra_ A:322-328,458-479,485-498 1lar d1larb2 B:1682-1687,1815-1837,1840-1853 1gwz d1gwza_ A:322-327,457-479,485-498 1lar d1lara2 A:1682-1688,1815-1837,1840-1853 2shp d2shpb1 B:326-332,461-483,489-502 2shp d2shpa1 A:326-332,461-483,489-502 10. c.62.1 vWA-like vWA-like core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 321456; strand 3 is antiparallel to the rest 1tye d1tyed2 D:111-120,127-147,199-210 1tye d1tyeb2 B:111-120,127-147,199-210 1tye d1tyef2 F:111-120,124-147,199-210 1pt6 d1pt6b_ B:143-151,157-173,201-212 1m2o d1m2oc3 C:122-130,133-152,234-245 1m2o d1m2oa3 A:122-130,133-152,234-245 1m2v d1m2vb3 B:303-313,320-333,399-415 1rs0 d1rs0a2 A:243-252,257-279,306-318 1q0p d1q0pa_ A:243-252,257-279,306-318 1rtk d1rtka2 A:243-252,257-279,306-318 1rrk d1rrka2 A:243-252,257-279,306-318 1t6b d1t6by_ Y:43-51,55-74,98-112 1mhp d1mhpa_ A:146-156,161-177,205-216 2ok5 d2ok5a1 A:242-253,261-279,306-317 1mhp d1mhpb_ B:146-156,161-177,205-216 1jeq d1jeqb2 B:7-16,29-49,87-99 2qtv d2qtva3 A:122-130,133-151,234-245 1m2v d1m2va3 A:122-130,133-151,234-245 1pd1 d1pd1a3 A:303-312,320-333,399-415 1jey d1jeyb2 B:7-16,29-49,87-99 1jey d1jeyb2 B:159-165,198-217,216-225 1pd0 d1pd0a3 A:303-312,320-333,399-415 1pcx d1pcxa3 A:303-312,320-333,399-415 1oak d1oaka_ A:512-520,526-545,573-584 1m10 d1m10a_ A:512-520,526-545,573-584 1qcy d1qcya_ A:142-151,157-172,201-212 1ijk d1ijka_ A:512-520,526-545,573-584 1ijb d1ijba_ A:512-521,526-545,573-584 1dzi d1dzia_ A:143-153,158-173,202-213 1auq d1auqa_ A:512-521,526-545,573-584 2b2x d2b2xb1 B:147-155,161-175,207-216 1u0o d1u0oc1 C:512-520,526-545,573-584 1ck4 d1ck4b_ B:146-155,161-177,205-216 1ck4 d1ck4a_ A:146-155,161-177,205-216 1fns d1fnsa_ A:512-521,526-545,573-584 2i91 d2i91a2 A:370-377,391-408,429-441 2i91 d2i91b2 B:370-377,391-408,429-441 1idn d1idn2_ 2:433-441,446-465,494-502 1qc5 d1qc5a_ A:32-41,47-63,91-102 1qc5 d1qc5b_ B:332-341,347-363,391-402 1bhq d1bhq2_ 2:433-441,446-465,494-502 1sht d1shtx_ X:42-51,55-75,98-112 1sq0 d1sq0a_ A:512-521,526-545,573-584 1pt6 d1pt6a_ A:142-151,157-173,201-212 2b2x d2b2xa1 A:146-155,161-177,205-216 1u0n d1u0na1 A:512-521,526-544,573-584 1shu d1shux_ X:42-51,55-74,98-112 1bho d1bho1_ 1:133-141,146-165,194-202 1bhq d1bhq1_ 1:133-141,146-165,194-202 1yvp d1yvpb2 B:370-377,391-408,429-441 1idn d1idn1_ 1:133-140,146-165,194-202 1uex d1uexc_ C:512-521,526-544,573-584 1m1u d1m1ua_ A:132-142,146-165,194-202 1yvr d1yvra2 A:370-377,391-408,429-441 1yvp d1yvpa2 A:370-377,391-408,429-441 1n3y d1n3ya_ A:130-139,144-163,192-200 1fe8 d1fe8c_ C:926-936,940-958,987-998 1l5g d1l5gb2 B:111-120,128-146,199-211 1n9z d1n9za_ A:132-141,146-165,194-202 1fe8 d1fe8a_ A:926-936,940-958,987-998 1atz d1atzb_ B:926-936,940-958,987-998 1m1x d1m1xb2 B:111-120,121-134,199-211 1ao3 d1ao3b_ B:4-14,18-36,65-76 2adf d2adfa1 A:926-936,940-958,987-998 1dgq d1dgqa_ A:129-138,143-162,191-199 1ao3 d1ao3a_ A:4-14,18-36,65-76 1ido d1idoa_ A:132-141,146-165,194-202 1atz d1atza_ A:926-935,940-958,987-998 1lfa d1lfab_ B:129-138,143-162,191-199 1na5 d1na5a_ A:132-141,146-165,194-202 1jv2 d1jv2b2 B:111-120,121-134,199-210 1fe8 d1fe8b_ B:926-935,940-958,987-998 1mf7 d1mf7a_ A:132-141,146-165,194-202 1m1x d1m1xb2 B:111-120,133-143,199-211 1jlm d1jlma_ A:132-141,146-165,194-202 1u8c d1u8cb2 B:1111-1119,1133-1147,1199-1210 1jv2 d1jv2b2 B:111-120,133-146,199-210 1u8c d1u8cb2 B:1111-1119,1121-1134,1199-1210 19. d.45.1 ClpS-like ClpS-like beta-alpha(2)-beta-alpha-beta; 2 layers, alpha/beta 2gya d2gya52 5:54-62,64-77,79-90 2gyc d2gyc52 5:54-62,64-77,79-90 1rqs d1rqsa_ A:53-62,64-77,79-90 2bcw d2bcwb1 B:54-61,64-77,79-90 1ctf d1ctfa_ A:54-61,64-77,79-90 1dd4 d1dd4b2 B:60-67,69-82,84-95 1dd3 d1dd3b2 B:58-67,69-82,84-95 1dd4 d1dd4a2 A:58-67,69-82,84-95 1rqu d1rqub2 B:53-62,64-77,79-90 1rqu d1rqua2 A:53-62,64-77,79-90 1dd3 d1dd3a2 A:58-67,69-82,84-95 1yl3 d1yl3i2 I:58-67,69-82,84-95 1yl3 d1yl3j2 J:58-67,69-82,84-95 1mg9 d1mg9a_ A:27-34,39-52,54-69 1rqv d1rqvb2 B:52-62,64-77,79-90 1mbv d1mbvb_ B:27-34,39-52,54-69 2zjq d2zjq51 5:56-65,67-80,82-93 1rqv d1rqva2 A:52-62,64-77,79-90 1mbu d1mbuc_ C:27-34,39-52,54-69 1r6q d1r6qc1 C:27-34,39-52,54-69 1r6o d1r6oc1 C:27-34,39-52,54-69 1lzw d1lzwa_ A:12-19,24-37,39-54 1mbx d1mbxc_ C:27-34,39-52,54-69 2gya d2gya32 3:55-59,64-77,79-90 1mbu d1mbud_ D:27-34,39-52,54-69 1mbx d1mbxd_ D:27-34,39-52,54-69 1r6o d1r6od1 D:27-34,39-52,54-69 1r6q d1r6qd1 D:27-34,39-52,54-69 22. a.56.1 CO dehydrogenase ISP C-domain like contains 2Fe-2S cluster ! CO dehydrogenase ISP C-domain like core: 4 helices, bundle 1jrp d1jrpg1 G:55-62,103-121,124-133 1jrp d1jrpe1 E:55-62,103-121,124-133 1jro d1jroe1 E:55-62,103-121,124-133 1jrp d1jrpc1 C:55-62,103-121,124-133 1jro d1jroc1 C:55-62,103-121,124-133 1jrp d1jrpa1 A:55-62,103-121,124-133 1jro d1jroa1 A:55-62,103-121,124-133 1jro d1jrog1 G:55-62,103-121,124-133 1rm6 d1rm6f1 F:55-60,103-119,122-134 1rm6 d1rm6c1 C:55-60,103-119,122-134 1sb3 d1sb3f1 F:55-60,101-119,122-134 1sb3 d1sb3c1 C:55-60,101-119,122-134 1t3q d1t3qd1 D:62-67,108-126,129-141 1ffv d1ffvd1 D:56-61,102-120,123-135 1t3q d1t3qa1 A:62-67,108-126,129-141 1ffu d1ffud1 D:56-61,102-120,123-135 1ffu d1ffua1 A:56-61,102-120,123-135 1fiq d1fiqa1 A:64-72,114-132,135-144 3b9j d3b9ja1 A:62-72,114-132,135-146 1v97 d1v97b1 B:62-72,114-132,135-146 1vlb d1vlba1 A:54-59,101-119,122-134 1vdv d1vdvb1 B:62-72,114-132,135-144 1vdv d1vdva1 A:62-72,114-132,135-144 1sij d1sija1 A:54-59,101-119,122-134 1n5x d1n5xa1 A:62-72,114-132,135-147 1n5x d1n5xb1 B:62-72,114-132,135-147 1dgj d1dgja1 A:54-59,101-119,122-134 1v97 d1v97a1 A:63-72,114-132,135-146 1fo4 d1fo4b1 B:63-72,114-132,135-144 3b9j d3b9ji1 I:63-72,114-132,135-147 1fo4 d1fo4a1 A:63-72,114-132,135-144 1ffv d1ffva1 A:56-61,102-114,123-135 1n62 d1n62d1 D:56-61,103-121,124-133 1n60 d1n60d1 D:56-61,103-121,124-133 1n62 d1n62a1 A:56-61,103-121,124-133 1n60 d1n60a1 A:56-61,103-121,124-133 1n63 d1n63d1 D:56-61,103-121,124-133 1zxi d1zxia1 A:56-61,103-121,124-133 1n63 d1n63a1 A:56-61,103-121,124-133 1n61 d1n61a1 A:56-61,103-121,124-133 1n61 d1n61d1 D:56-61,103-121,124-133 1zxi d1zxid1 D:56-61,103-121,124-133 1n5w d1n5wd1 D:56-61,103-121,124-133 1n5w d1n5wa1 A:56-61,103-121,124-133 28. d.95.2 Homing endonucleases Homing endonuclease-like alpha-beta(2)-alpha-beta(2)-alpha; 2 layers: a/b; antiparallel sheet 1243 1n3f d1n3fh_ H:720-730,780-792,795-812 1n3f d1n3fb_ B:220-230,280-292,295-312 1u0c d1u0cb_ B:320-330,380-392,395-412 1n3f d1n3fa_ A:20-30,80-92,95-112 1g9y d1g9yb_ B:220-230,280-292,295-312 1g9z d1g9za_ A:20-30,80-92,95-112 1n3f d1n3fg_ G:520-530,580-592,595-612 1n3e d1n3ea_ A:20-30,80-92,95-112 1n3e d1n3eb_ B:220-230,280-292,295-312 1g9y d1g9ya_ A:20-30,80-92,95-112 1n3e d1n3eh_ H:720-730,780-792,795-812 1mow d1mowa1 A:117-127,177-189,192-209 1mow d1mowd1 D:617-627,677-689,692-709 1n3e d1n3eg_ G:520-530,580-592,595-612 1t9j d1t9jb_ B:320-330,380-392,395-412 1g9z d1g9zb_ B:220-230,280-292,295-312 1u0c d1u0ca_ A:20-30,80-92,95-112 1bp7 d1bp7c_ C:20-30,80-92,95-112 1bp7 d1bp7b_ B:20-30,80-92,95-112 1u0d d1u0db_ B:320-330,380-392,395-412 1t9j d1t9ja_ A:20-30,80-92,95-112 1mow d1mowj1 J:1617-1627,1677-1689,1692-1710 1dq3 d1dq3a4 A:251-255,302-314,319-333 1bp7 d1bp7a_ A:20-30,80-92,95-112 1m5x d1m5xb_ B:222-232,286-298,301-318 1bp7 d1bp7d_ D:20-30,80-92,95-112 1m5x d1m5xa_ A:22-32,86-98,101-118 1af5 d1af5a_ A:21-30,80-92,95-112 1mow d1mowg1 G:1117-1127,1177-1189,1192-1207 1u0d d1u0da_ A:20-30,80-92,95-119 2o7m d2o7ma1 A:21-30,80-92,95-112 1t9i d1t9ib_ B:321-330,380-392,395-412 2o7m d2o7mb1 B:21-30,80-92,95-112 1t9i d1t9ia_ A:21-30,80-92,95-112 1n3f d1n3fa_ A:20-30,118-137,144-151 1n3f d1n3fh_ H:720-730,818-837,844-851 1n3f d1n3fb_ B:220-230,318-337,344-351 1n3f d1n3fg_ G:520-530,618-637,644-651 1ef0 d1ef0b3 B:299-304,311-327,343-358 1dfa d1dfaa3 A:299-304,311-327,343-358 1vde d1vdeb3 B:299-304,311-327,343-358 1um2 d1um2b3 B:582-587,594-610,626-641 1t9i d1t9ia_ A:21-30,118-137,144-154 1n3e d1n3ea_ A:20-30,118-137,144-152 1n3e d1n3eh_ H:720-730,818-837,844-852 1p8k d1p8kz2 Z:149-156,205-219,225-242 1n3e d1n3eb_ B:220-230,318-337,344-352 1mow d1mowg1 G:1117-1127,1215-1234,1241-1250 1t9j d1t9ja_ A:20-30,118-137,144-153 1u0d d1u0db_ B:320-330,418-437,444-451 1t9j d1t9jb_ B:320-330,418-437,444-453 1n3e d1n3eg_ G:520-530,618-637,644-653 1r7m d1r7ma2 A:145-149,202-213,217-225 1bp7 d1bp7c_ C:20-30,118-137,144-153 1bp7 d1bp7b_ B:20-30,118-137,144-153 1t9i d1t9ib_ B:321-330,418-437,444-456 1mow d1mowj1 J:1617-1627,1715-1734,1741-1752 1mow d1mowa1 A:117-127,215-234,241-252 1bp7 d1bp7d_ D:20-30,118-137,144-153 1bp7 d1bp7a_ A:20-30,118-137,144-153 1mow d1mowd1 D:617-627,715-734,741-752 1g9z d1g9zb_ B:220-230,318-337,344-353 1u0c d1u0ca_ A:20-30,118-137,144-153 1u0d d1u0da_ A:20-30,118-137,144-153 1g9z d1g9za_ A:20-30,118-137,144-153 1g9y d1g9ya_ A:20-30,118-137,144-153 1g9y d1g9yb_ B:220-230,318-337,344-353 1u0c d1u0cb_ B:320-330,418-437,444-453 1p8k d1p8kz1 Z:17-25,80-89,92-108 1m5x d1m5xb_ B:222-232,324-344,351-364 1m5x d1m5xa_ A:22-32,124-144,151-164 33. a.248.1 SP0561-like SP0561-like 5 helices; array; includes extra N-terminal and C-terminal short strands forming parrallel beta-sheet ladder 2fi0 d2fi0a1 A:7-11,14-23,22-33 37. e.28.1 Reovirus inner layer core protein p3 Reovirus inner layer core protein p3 large protein without apparent domain division; has a number of all-alpha regions and one all beta domain near the C-end 2btv d2btvb_ B:99-106,167-175,862-871 1uf2 d1uf2b_ B:89-98,165-174,971-980 1uf2 d1uf2a_ A:89-98,165-174,971-980 2btv d2btva_ A:100-106,167-175,862-871 1uf2 d1uf2b_ B:369-375,384-399,404-424 1uf2 d1uf2a_ A:369-375,384-399,404-424 2btv d2btvb_ B:352-357,366-382,391-409 45. b.28.1 Baculovirus p35 protein has a few helices inserted in loops ! Baculovirus p35 protein sandwich; 14 strands in 2 sheets; greek-key 1p35 d1p35a_ A:41-50,114-123,126-138 1p35 d1p35b_ B:41-50,114-123,126-138 1p35 d1p35c_ C:41-50,114-123,126-138 1i3s d1i3sa_ A:41-50,114-123,126-138 1i3s d1i3sb_ B:41-50,114-123,126-138 1i3s d1i3sc_ C:41-50,114-123,126-138 1i3p d1i3pa_ A:41-50,114-123,126-137 47. d.124.1 Ribonuclease Rh-like Ribonuclease Rh-like alpha+beta fold 1ucd d1ucda_ A:2-10,76-97,97-113 1v9h d1v9ha_ A:2-10,76-97,97-113 1j1f d1j1fa_ A:2-10,76-97,97-113 1j1g d1j1ga_ A:2-10,76-97,97-113 1bk7 d1bk7a_ A:2-10,76-97,97-113 1ucc d1ucca_ A:2-10,76-97,97-113 1uca d1ucaa_ A:2-10,76-97,97-113 1ucg d1ucga_ A:2-10,76-97,97-113 1iqq d1iqqa_ A:30-39,57-69,73-89 1j1f d1j1fa_ A:31-41,58-70,76-97 1j1g d1j1ga_ A:31-41,58-70,76-97 1ucg d1ucgb_ B:31-41,58-70,76-89 1bk7 d1bk7a_ A:31-41,61-70,76-97 1uca d1ucaa_ A:31-41,61-70,76-97 1ucd d1ucda_ A:31-41,61-70,76-97 1ucc d1ucca_ A:31-41,61-70,76-97 1v9h d1v9ha_ A:31-41,61-70,76-97 1dix d1dixa_ A:36-46,65-77,85-102 1iyb d1iyba_ A:5-13,85-98,106-122 1ucg d1ucgb_ B:2-10,76-89,97-113 1iyb d1iybb_ B:5-13,85-98,106-122 1bol d1bola_ A:43-53,80-92,97-114 1dix d1dixa_ A:5-13,85-102,107-123 1bol d1bola_ A:25-33,97-114,127-145 48. d.75.1 tRNA-intron endonuclease N-terminal domain-like MutS N-terminal domain-like beta(2)-alpha-beta(2)-alpha-beta(2); 2 layers, alpha/beta 1a79 d1a79b2 B:9-16,46-57,70-83 1a79 d1a79a2 A:9-16,46-57,70-83 1a79 d1a79d2 D:9-16,46-57,70-83 1a79 d1a79c2 C:9-16,46-57,70-83 2gjw d2gjwd4 D:154-158,185-196,204-217 2gjw d2gjwa4 A:154-158,185-196,204-217 1r0v d1r0vd3 D:148-155,182-193,201-214 1r11 d1r11a4 A:148-155,182-193,201-214 1r0v d1r0vc3 C:148-155,182-193,201-214 1r11 d1r11b4 B:148-155,182-193,201-214 1r0v d1r0va3 A:148-155,182-193,201-214 1r0v d1r0vb3 B:148-155,182-193,201-214 2gjw d2gjwc4 C:150-157,184-195,203-216 2gjw d2gjwb4 B:150-157,184-195,203-216 1rlv d1rlva4 A:148-155,182-193,201-214 1rlv d1rlvb4 B:148-155,182-193,201-214 1r11 d1r11a3 A:26-31,31-42,48-61 1r11 d1r11b3 B:26-31,31-42,48-61 1rlv d1rlva3 A:26-31,31-42,48-61 1rlv d1rlvb3 B:26-31,31-42,48-61 2gjw d2gjwb4 B:179-184,184-195,203-216 2gjw d2gjwc4 C:179-184,184-195,203-216 49. d.87.1 FAD/NAD-linked reductases, dimerisation (C-terminal) domain both first two domains are of same beta/beta/alpha fold ! CO dehydrogenase flavoprotein C-domain-like core: beta(3,4)-alpha(3); alpha+beta sandwich 1xdi d1xdib2 B:400-408,439-447,452-465 1xdi d1xdia2 A:400-409,439-447,452-465 1dxl d1dxld3 D:399-408,438-446,451-466 1dxl d1dxlc3 C:399-408,438-446,451-466 1v59 d1v59b3 B:407-416,446-454,459-474 1bhy d1bhya3 A:521-531,561-569,574-588 1ojt d1ojta3 A:521-531,561-569,574-588 1dxl d1dxlb3 B:399-408,438-446,451-466 1dxl d1dxla3 A:399-408,438-446,451-466 1ebd d1ebda3 A:396-405,435-443,448-461 1jeh d1jeha3 A:407-416,446-454,459-474 1jeh d1jehb3 B:407-416,446-454,459-474 1v59 d1v59a3 A:407-416,446-454,459-474 3lad d3lada3 A:400-409,439-446,452-466 1ebd d1ebdb3 B:396-405,435-443,448-461 1lpf d1lpfa3 A:400-409,439-446,452-466 1lpf d1lpfb3 B:400-409,439-446,452-466 3lad d3ladb3 B:400-409,439-446,452-466 1lvl d1lvla3 A:385-396,426-434,439-453 1aog d1aogb3 B:410-420,450-458,463-472 1bzl d1bzla3 A:410-420,450-458,463-472 2c3c d2c3cb3 B:451-460,490-497,506-518 1mo9 d1mo9b3 B:451-460,490-497,506-518 1nda d1ndaa3 A:409-419,449-457,462-471 1nda d1ndac3 C:409-419,449-457,462-471 1nda d1ndab3 B:409-419,449-457,462-471 1nda d1ndad3 D:409-419,449-457,462-471 1bzl d1bzlb3 B:410-420,450-458,463-472 2c3d d2c3da3 A:451-460,490-497,506-518 2c3d d2c3db3 B:451-460,490-497,506-518 1joa d1joaa3 A:370-382,413-420,433-447 1tyt d1tyta3 A:410-420,450-458,463-472 1typ d1typb3 B:410-420,450-458,463-472 1mok d1mokb3 B:451-460,490-497,506-518 1mok d1mokd3 D:451-460,490-497,506-518 1fea d1feaa3 A:409-419,449-457,462-471 1nhs d1nhsa3 A:370-382,413-420,433-447 2c3c d2c3ca3 A:451-460,490-497,505-518 1nhr d1nhra3 A:370-382,413-420,433-447 1nhp d1nhpa3 A:370-382,413-420,433-447 2npx d2npxa3 A:370-382,413-420,433-447 1f8w d1f8wa3 A:370-382,413-420,433-447 1mo9 d1mo9a3 A:451-460,490-497,505-518 1nhq d1nhqa3 A:370-382,413-420,433-447 1npx d1npxa3 A:370-382,413-420,433-447 1h6v d1h6va3 A:421-429,461-469,474-482 1mok d1mokc3 C:451-460,490-497,505-518 1mok d1moka3 A:451-460,490-497,505-518 1h6v d1h6ve3 E:421-429,461-469,474-482 1h6v d1h6vd3 D:421-429,461-469,474-482 4grt d4grta3 A:416-425,456-464,469-477 1h6v d1h6vf3 F:421-429,461-469,474-482 1h6v d1h6vb3 B:421-429,461-469,474-482 1h6v d1h6vc3 C:421-429,461-469,474-482 2grt d2grta3 A:416-425,456-464,469-477 1bwc d1bwca3 A:416-425,456-464,469-477 1grt d1grta3 A:416-425,456-464,469-477 1gsn d1gsna3 A:416-425,456-464,469-477 4gr1 d4gr1a3 A:416-425,456-464,469-477 1xan d1xana3 A:416-425,456-464,469-477 3grt d3grta3 A:416-425,456-464,469-477 1gre d1grea3 A:416-425,456-464,469-477 1grb d1grba3 A:416-425,456-464,469-477 1grg d1grga3 A:416-425,456-464,469-477 1dnc d1dnca3 A:416-425,456-464,469-477 1gra d1graa3 A:416-425,456-464,469-477 1grf d1grfa3 A:416-425,456-464,469-477 3grs d3grsa3 A:416-425,456-464,469-477 1k4q d1k4qa3 A:416-425,456-464,469-477 5grt d5grta3 A:416-425,456-464,469-477 1onf d1onfa3 A:433-443,473-481,486-494 1aog d1aoga3 A:410-420,450-458,463-471 1gxf d1gxfb3 B:410-420,450-458,463-471 1tyt d1tytb3 B:410-420,450-458,463-471 1fec d1feca3 A:409-419,449-457,462-470 1gxf d1gxfa3 A:410-420,450-458,463-471 1feb d1febb3 B:409-419,449-457,462-470 1ger d1gerb3 B:387-397,428-436,441-449 1geu d1geua3 A:387-397,428-436,441-449 1geu d1geub3 B:387-397,428-436,441-449 1get d1geta3 A:387-397,428-436,441-449 2tpr d2tpra3 A:409-419,449-457,462-470 1fec d1fecb3 B:409-419,449-457,462-470 1ges d1gesb3 B:387-397,428-436,441-449 1typ d1typa3 A:410-420,450-458,463-471 1fea d1fead3 D:409-419,449-457,462-470 1ger d1gera3 A:387-397,428-436,441-449 2tpr d2tprb3 B:409-419,449-457,462-470 1fea d1feab3 B:409-419,449-457,462-470 1ges d1gesa3 A:387-397,428-436,441-449 1get d1getb3 B:387-398,428-436,441-449 1fea d1feac3 C:409-419,449-457,462-470 1feb d1feba3 A:409-419,449-457,462-470 55. c.19.1 FabD/lysophospholipase-like FabD/lysophospholipase-like core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 432156; strand 4 is antiparallel to the rest 1cjy d1cjyb2 B:1222-1228,1228-1240,1385-1395 1nm2 d1nm2a1 A:91-97,96-108,239-253 1mla d1mlaa1 A:86-92,91-103,239-253 1oxw d1oxwb_ B:1071-1077,1077-1088,1179-1190 1oxw d1oxwc_ C:2071-2077,2077-2088,2179-2190 1oxw d1oxwa_ A:71-77,77-88,179-190 1cjy d1cjya2 A:222-227,228-240,385-395 57. c.87.1 UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase consists of two non-similar domains with 3 layers (a/b/a) each ! domain 1: parallel beta-sheet of 7 strands, order 3214567 ! domain 2: parallel beta-sheet of 6 strands, order 321456 1psw d1pswa_ A:214-221,221-236,236-244 1pnv d1pnvb_ B:287-294,295-306,357-371 1pn3 d1pn3b_ B:287-294,295-306,357-371 1qkj d1qkja_ A:251-256,267-277,316-338 1pn3 d1pn3a_ A:287-293,295-306,357-371 1nlm d1nlmb_ B:256-262,263-274,323-338 1nlm d1nlma_ A:256-262,263-274,323-338 1f0k d1f0ka_ A:256-262,263-274,323-338 1e4o d1e4ob_ B:300-307,307-326,328-339 1e4o d1e4oa_ A:300-307,307-326,328-339 1ahp d1ahpa_ A:300-307,307-326,328-339 1ahp d1ahpb_ B:300-307,307-326,328-339 2asv d2asva1 A:300-307,307-326,328-339 1ygp d1ygpb_ B:332-339,339-358,360-371 1abb d1abbd_ D:333-339,339-358,360-371 1l5w d1l5wa_ A:300-307,307-326,328-339 1l6i d1l6ia_ A:300-307,307-326,328-339 1l5v d1l5va_ A:300-307,307-326,328-339 2asv d2asvb1 B:300-307,307-326,328-339 2av6 d2av6b1 B:300-307,307-326,328-339 2aw3 d2aw3a1 A:300-307,307-326,328-339 1qm5 d1qm5b_ B:300-307,307-326,328-339 1qm5 d1qm5a_ A:300-307,307-326,328-339 1l5w d1l5wb_ B:300-307,307-326,328-339 1l5v d1l5vb_ B:300-307,307-326,328-339 9gpb d9gpbd_ D:332-339,339-358,360-371 1l6i d1l6ib_ B:300-307,307-326,328-339 2ecp d2ecpb_ B:332-339,339-358,360-371 1abb d1abbb_ B:332-339,342-358,360-371 9gpb d9gpbc_ C:332-339,339-358,360-371 1gpa d1gpab_ B:333-339,342-358,360-371 7gpb d7gpbb_ B:332-339,342-358,360-371 1pyg d1pyga_ A:332-339,342-358,360-371 9gpb d9gpbb_ B:332-339,342-358,360-371 1ygp d1ygpa_ A:332-339,339-358,360-371 1noi d1noib_ B:332-339,342-358,360-371 2qrq d2qrqa1 A:332-339,342-358,360-371 2qrp d2qrpa1 A:332-339,342-358,360-371 9gpb d9gpba_ A:661-666,675-685,793-808 1xl1 d1xl1a1 A:332-339,342-358,360-371 1p4g d1p4ga_ A:332-339,342-358,360-371 1p4h d1p4ha_ A:332-339,342-358,360-371 1noi d1noia_ A:333-339,342-358,360-371 2av6 d2av6a1 A:300-307,310-326,328-339 1gpa d1gpac_ C:332-339,339-358,360-372 1xkx d1xkxa1 A:332-339,342-358,360-371 2pyi d2pyia1 A:332-339,342-358,360-371 1xc7 d1xc7a1 A:332-339,342-358,360-371 9gpb d9gpbd_ D:661-666,675-685,793-808 2f3p d2f3pa1 A:332-339,342-358,360-371 7gpb d7gpbc_ C:332-339,342-358,360-371 1ww3 d1ww3a1 A:332-339,342-358,360-371 1e1y d1e1ya_ A:332-339,342-358,360-371 2gm9 d2gm9a1 A:332-339,342-358,360-371 2ff5 d2ff5a1 A:332-339,342-358,360-371 1pyg d1pygc_ C:333-339,342-358,360-371 7gpb d7gpba_ A:332-339,342-358,360-371 1noi d1noic_ C:332-339,342-358,360-371 1xl0 d1xl0a1 A:332-339,342-358,360-371 2pyd d2pyda1 A:332-339,342-358,360-371 2f3u d2f3ua1 A:332-339,342-358,360-371 2g9r d2g9ra1 A:332-339,342-358,360-371 1l7x d1l7xb_ B:332-339,342-358,360-371 1abb d1abbc_ C:332-339,342-358,360-371 2f3s d2f3sa1 A:332-339,342-358,360-371 1p2b d1p2ba_ A:332-339,342-358,360-371 1p4j d1p4ja_ A:332-339,342-358,360-371 1a8i d1a8ia_ A:332-339,342-358,360-371 1l5s d1l5sb_ B:332-339,342-358,360-371 1bx3 d1bx3a_ A:332-339,342-358,360-371 2qrh d2qrha1 A:332-339,342-358,360-371 2g9u d2g9ua1 A:332-339,342-358,360-371 1c8l d1c8la_ A:332-339,342-358,360-371 2aw3 d2aw3b1 B:300-307,310-326,328-339 2ieg d2iega1 A:332-339,342-358,360-371 1lwo d1lwoa_ A:332-339,342-358,360-371 2g9v d2g9va1 A:332-339,342-358,360-371 1lwn d1lwna_ A:332-339,342-358,360-371 1exv d1exvb_ B:332-339,342-358,360-371 2qrg d2qrga1 A:332-339,342-358,360-371 1exv d1exva_ A:332-339,342-358,360-371 1l5r d1l5rb_ B:332-339,342-358,360-371 3amv d3amva_ A:332-339,342-358,360-371 1p29 d1p29a_ A:332-339,342-358,360-371 1ww2 d1ww2a1 A:332-339,342-358,360-371 1pyg d1pygd_ D:332-339,342-358,360-371 2qrm d2qrma1 A:332-339,342-358,360-371 1l5r d1l5ra_ A:332-339,342-358,360-371 2f3q d2f3qa1 A:332-339,342-358,360-371 1abb d1abba_ A:332-339,342-358,360-371 1fu4 d1fu4a_ A:332-339,342-358,360-371 2gpa d2gpaa_ A:332-339,342-358,360-371 1noi d1noid_ D:332-339,342-358,360-371 2gpn d2gpna_ A:332-339,342-358,360-371 1gpa d1gpad_ D:332-339,342-358,360-372 1gpb d1gpba_ A:332-339,342-358,360-371 1fu8 d1fu8a_ A:332-339,342-358,360-371 1c8k d1c8ka_ A:332-339,342-358,360-371 1h5u d1h5ua_ A:332-339,342-358,360-371 1z62 d1z62a1 A:332-339,342-358,360-371 1nok d1noka_ A:332-339,342-358,360-371 1fs4 d1fs4a_ A:332-339,342-358,360-371 1ggn d1ggna_ A:332-339,342-358,360-371 4gpb d4gpba_ A:332-339,342-358,360-371 1ftq d1ftqa_ A:332-339,342-358,360-371 2ecp d2ecpa_ A:332-339,342-358,360-371 2g9q d2g9qa1 A:333-339,342-358,360-371 2amv d2amva_ A:332-339,342-358,360-371 2qlm d2qlma1 A:332-339,342-358,360-371 3gpb d3gpba_ A:332-339,342-358,360-371 1hlf d1hlfa_ A:332-339,342-358,360-371 1p2d d1p2da_ A:332-339,342-358,360-371 1ftw d1ftwa_ A:332-339,342-358,360-371 1gpa d1gpaa_ A:332-339,342-358,360-372 1fty d1ftya_ A:332-339,342-358,360-371 2prj d2prja_ A:332-339,342-358,360-371 1b4d d1b4da_ A:333-339,342-358,360-371 6gpb d6gpba_ A:332-339,342-358,360-371 2ske d2skea_ A:332-339,342-358,360-371 1pyg d1pygb_ B:332-339,342-358,360-371 1rzu d1rzub_ B:367-372,379-389,443-457 7gpb d7gpbd_ D:332-339,342-358,360-372 1fu7 d1fu7a_ A:332-339,342-358,360-371 2skd d2skda_ A:332-339,342-358,360-371 2off d2offa1 A:332-339,342-358,360-371 2fet d2feta1 A:332-339,342-358,360-372 2qn3 d2qn3a1 A:332-339,342-358,360-371 2skc d2skca_ A:332-339,342-358,360-371 1wuy d1wuya1 A:332-339,342-358,360-371 1wv1 d1wv1a1 A:332-339,342-358,360-371 2ieg d2iegb1 B:332-339,342-358,360-372 2azd d2azdb1 B:300-307,310-326,328-339 2iei d2ieia1 A:332-339,342-358,360-371 1gfz d1gfza_ A:332-339,342-358,360-371 1gg8 d1gg8a_ A:332-339,342-358,360-371 1rzv d1rzvb_ B:367-372,379-389,443-457 2gj4 d2gj4a1 A:332-339,342-358,360-371 1wv0 d1wv0a1 A:332-339,342-358,360-371 1fc0 d1fc0b_ B:1332-1339,1342-1358,1360-1371 1fc0 d1fc0a_ A:332-339,342-358,360-371 2pri d2pria_ A:332-339,342-358,360-371 1wut d1wuta1 A:332-339,342-358,360-371 2azd d2azda1 A:300-307,310-326,328-339 9gpb d9gpba_ A:333-339,342-358,360-371 1rzv d1rzva_ A:367-372,379-389,443-457 1k06 d1k06a_ A:332-339,342-358,360-372 1c50 d1c50a_ A:332-339,342-358,360-371 1rzu d1rzua_ A:367-372,379-389,443-457 2ati d2atib1 B:332-339,342-358,360-371 5gpb d5gpba_ A:333-339,342-358,360-371 1l7x d1l7xa_ A:333-339,342-358,360-371 2qnb d2qnba1 A:332-339,342-358,360-372 2qn8 d2qn8a1 A:332-339,342-358,360-372 1k08 d1k08a_ A:332-339,342-358,360-372 1b4d d1b4da_ A:81-86,289-315,325-334 1kti d1ktia_ A:332-339,342-358,360-372 2qn9 d2qn9a1 A:332-339,342-358,360-372 1fa9 d1fa9a_ A:332-339,342-358,360-371 2qn7 d2qn7a1 A:332-339,342-358,360-372 1em6 d1em6a_ A:333-339,342-358,360-371 1em6 d1em6b_ B:333-339,342-358,360-371 1p2g d1p2ga_ A:333-339,342-358,360-371 8gpb d8gpba_ A:333-339,342-358,360-371 1l5q d1l5qb_ B:333-339,342-358,360-371 1noj d1noja_ A:333-339,342-358,360-371 2qln d2qlna1 A:332-339,342-358,360-372 1gpy d1gpya_ A:333-339,342-358,360-371 3cej d3ceja1 A:81-87,289-315,325-334 1uzu d1uzua_ A:333-339,342-358,360-371 1l5q d1l5qa_ A:333-339,342-358,360-371 3cej d3ceja1 A:333-339,342-358,360-371 2qn2 d2qn2a1 A:333-339,342-358,360-371 1l5s d1l5sa_ A:333-339,342-358,360-371 1z6q d1z6qa1 A:333-339,342-358,360-371 3ceh d3cehb1 B:332-339,342-358,360-372 2qll d2qlla1 A:333-339,342-358,360-371 1noi d1noia_ A:81-86,289-315,325-334 2qn1 d2qn1a1 A:333-339,342-358,360-371 3cem d3cema1 A:333-339,342-358,360-371 3cem d3cemb1 B:333-339,342-358,360-371 3ceh d3ceha1 A:333-339,342-358,360-371 1z6p d1z6pa1 A:333-339,342-358,360-371 1gpa d1gpab_ B:81-86,289-315,325-334 1noj d1noja_ A:216-232,249-257,261-277 2gpb d2gpba_ A:333-339,342-358,360-371 1gpy d1gpya_ A:81-86,289-315,325-334 2iei d2ieib1 B:81-86,289-313,325-334 1l5q d1l5qb_ B:81-86,289-315,325-334 2amv d2amva_ A:216-232,249-257,261-277 1axr d1axra_ A:333-339,342-358,360-372 2iei d2ieib1 B:333-339,342-358,360-372 2qn1 d2qn1a1 A:81-86,289-314,325-334 4gpb d4gpba_ A:216-232,249-257,261-277 1noj d1noja_ A:81-86,289-314,325-334 1axr d1axra_ A:81-86,289-315,325-334 8gpb d8gpba_ A:81-86,289-315,325-334 1l5s d1l5sa_ A:81-86,289-315,325-334 1l5q d1l5qa_ A:81-86,289-315,325-334 2zb2 d2zb2a1 A:333-339,342-358,360-372 2zb2 d2zb2b1 B:333-339,342-358,360-372 1gfz d1gfza_ A:216-232,249-256,261-277 2g9q d2g9qa1 A:81-86,289-314,325-334 5gpb d5gpba_ A:81-86,289-315,325-334 2qn2 d2qn2a1 A:81-86,289-314,325-334 3ceh d3ceha1 A:81-86,289-315,325-334 1p2g d1p2ga_ A:81-86,289-314,325-334 1uzu d1uzua_ A:81-86,289-314,325-334 1wuy d1wuya1 A:216-232,249-257,261-277 1nok d1noka_ A:216-232,249-257,261-277 2ske d2skea_ A:216-232,249-257,261-277 1wut d1wuta1 A:216-232,249-257,261-277 1wv0 d1wv0a1 A:216-232,249-257,261-277 1fu4 d1fu4a_ A:216-232,249-257,261-277 2ati d2atia1 A:333-339,342-358,360-372 2skc d2skca_ A:216-232,249-257,261-277 1ftq d1ftqa_ A:216-232,249-257,261-277 2gpb d2gpba_ A:81-86,289-314,325-334 1c8k d1c8ka_ A:216-232,249-257,261-277 1fu8 d1fu8a_ A:216-232,249-257,261-277 1hlf d1hlfa_ A:216-232,249-257,261-277 1gg8 d1gg8a_ A:216-232,249-257,261-277 1fty d1ftya_ A:216-232,249-257,261-277 1fs4 d1fs4a_ A:216-232,249-257,261-277 1fu7 d1fu7a_ A:216-232,249-257,261-277 2pri d2pria_ A:216-232,249-257,261-277 1wv1 d1wv1a1 A:216-232,249-257,261-277 2prj d2prja_ A:216-232,249-257,261-277 1ggn d1ggna_ A:216-232,249-257,261-277 2skd d2skda_ A:216-232,249-257,261-277 1c50 d1c50a_ A:216-232,249-257,261-277 2gpb d2gpba_ A:216-232,249-257,261-277 1ftw d1ftwa_ A:216-232,249-257,261-277 1pyg d1pygc_ C:81-86,289-314,325-334 5gpb d5gpba_ A:216-232,249-257,261-277 1ww2 d1ww2a1 A:216-232,249-257,261-277 1axr d1axra_ A:216-232,249-257,261-277 1k08 d1k08a_ A:216-232,249-257,261-277 1l7x d1l7xa_ A:81-86,289-315,324-334 3cem d3cemb1 B:81-86,289-315,324-334 3cem d3cema1 A:81-86,289-315,324-334 1em6 d1em6a_ A:81-86,289-314,324-334 1em6 d1em6b_ B:81-86,289-314,324-334 2zb2 d2zb2b1 B:81-86,289-314,324-334 2ati d2atia1 A:81-86,289-314,324-334 1z6p d1z6pa1 A:81-86,289-315,323-334 2zb2 d2zb2a1 A:81-86,289-315,323-334 1z6q d1z6qa1 A:81-86,289-315,323-334 60. c.38.1 PTS IIb component PTS IIb component 3 layers: a/b/a, parallel beta-sheet of 6 strands, order 324156 1ble d1blea_ A:101-109,124-138,153-162 1ble d1blea_ A:120-124,124-138,153-162 1nrz d1nrzc_ C:120-124,124-138,153-162 1nrz d1nrzd_ D:101-107,124-138,153-162 62. d.168.1 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain unusual fold 1jnz d1jnza3 A:144-151,272-281,347-367 1jnz d1jnzc3 C:2144-2151,2272-2281,2347-2367 1jnr d1jnra3 A:144-151,272-281,347-367 1jnr d1jnrc3 C:144-151,272-281,347-367 1d4d d1d4da3 A:415-421,445-454,456-471 1d4c d1d4cd3 D:415-421,445-454,456-474 1d4c d1d4ca3 A:415-421,445-454,456-474 1d4e d1d4ea3 A:415-421,445-454,456-474 1d4c d1d4cc3 C:415-421,445-454,456-474 1d4c d1d4cb3 B:415-421,445-454,456-474 1qo8 d1qo8d3 D:411-417,441-450,452-470 1qo8 d1qo8a3 A:411-417,441-450,452-470 1jrx d1jrxb3 B:416-422,446-455,457-475 1jrx d1jrxa3 A:416-422,446-455,457-475 1jry d1jrya3 A:416-422,446-455,457-475 1jry d1jryb3 B:416-422,446-455,457-475 1p2h d1p2ha3 A:416-422,446-455,457-475 1lj1 d1lj1b3 B:416-422,446-455,457-475 1qjd d1qjda3 A:416-422,446-455,457-475 1ksu d1ksub3 B:416-422,446-455,457-475 1lj1 d1lj1a3 A:416-422,446-455,457-475 1y0p d1y0pa3 A:416-422,446-455,457-475 1ksu d1ksua3 A:416-422,446-455,457-475 1e39 d1e39a3 A:416-422,446-455,457-475 1q9i d1q9ia3 A:416-422,446-455,457-475 1p2e d1p2ea3 A:416-422,446-455,457-475 2b7s d2b7sa3 A:416-422,446-455,457-475 1jrz d1jrzb3 B:416-422,446-455,457-475 1jrz d1jrza3 A:416-422,446-455,457-475 1kss d1kssa3 A:416-422,446-455,457-475 2b7r d2b7ra3 A:416-422,446-455,457-475 1m64 d1m64b3 B:416-422,446-455,457-475 1m64 d1m64a3 A:416-422,446-455,457-475 71. c.50.1 Macro domain-like Macro domain-like 3 layers: a/b/a; mixed beta-sheet of 6 strands, order 165243, strand 3 is antiparallel to the rest 2afc d2afca1 A:18-28,33-44,43-57 2fxk d2fxka1 A:210-216,282-302,310-317 1yd9 d1yd9a1 A:34-40,106-126,134-141 2fg1 d2fg1a1 A:18-28,33-44,43-57 1yd9 d1yd9c1 C:34-40,106-126,134-141 2afc d2afcb1 B:18-28,33-44,43-57 1zr3 d1zr3a1 A:209-216,224-235,234-250 2fxk d2fxkb1 B:210-216,282-302,310-317 1zr3 d1zr3d1 D:210-216,282-302,310-317 1yd9 d1yd9b1 B:34-40,106-126,134-141 1zr3 d1zr3b1 B:210-216,282-302,310-317 1yd9 d1yd9d1 D:34-40,106-126,134-141 1gyt d1gytf1 F:16-24,29-40,41-50 1zr3 d1zr3b1 B:210-216,224-235,234-250 1zr3 d1zr3c1 C:210-216,224-235,234-250 1gyt d1gytg1 G:16-24,29-40,41-50 2fxk d2fxka1 A:210-216,224-235,234-250 1zr3 d1zr3d1 D:210-216,224-235,234-250 1yd9 d1yd9b1 B:34-40,48-59,58-74 1gyt d1gyti1 I:16-24,29-40,41-50 1gyt d1gytk1 K:16-24,29-40,41-50 1yd9 d1yd9d1 D:34-40,48-59,58-74 1yd9 d1yd9a1 A:34-40,48-59,58-74 2fxk d2fxkb1 B:210-216,224-235,234-250 1gyt d1gytd1 D:16-24,29-40,41-50 1gyt d1gytj1 J:15-24,29-40,41-50 1yd9 d1yd9c1 C:34-40,48-59,58-74 1gyt d1gyth1 H:16-24,29-40,41-50 1zr3 d1zr3a1 A:268-275,282-302,310-317 1gyt d1gyte1 E:16-24,29-40,41-50 1gyt d1gytb1 B:16-24,29-40,41-50 1gyt d1gyta1 A:16-24,29-40,41-50 1gyt d1gytl1 L:16-24,29-40,41-50 1ty8 d1ty8a_ A:72-81,161-181,192-199 1gyt d1gytc1 C:16-24,29-40,41-50 1yd9 d1yd9a1 A:92-99,106-126,134-141 1yd9 d1yd9c1 C:92-99,106-126,134-141 1zr3 d1zr3d1 D:268-275,282-302,310-317 2fxk d2fxka1 A:268-275,282-302,310-317 1zr3 d1zr3b1 B:268-275,282-302,310-317 1yd9 d1yd9b1 B:92-99,106-126,134-141 2fxk d2fxkb1 B:268-275,282-302,310-317 1yd9 d1yd9d1 D:92-99,106-126,134-141 1zr3 d1zr3a1 A:209-216,282-302,310-317 1lap d1lapa2 A:2-10,21-32,33-43 2ewb d2ewba2 A:2-11,21-32,33-43 1ty8 d1ty8a_ A:139-150,161-181,192-199 2j9a d2j9aa2 A:2-11,21-32,33-43 1lcp d1lcpb1 B:2-11,21-32,33-43 1lam d1lama2 A:2-11,21-32,33-43 1lan d1lana1 A:2-11,21-32,33-43 1lcp d1lcpa1 A:2-11,21-32,33-43 1bpn d1bpna2 A:2-15,21-32,33-43 1bll d1blle1 E:2-15,21-32,33-43 1bpm d1bpma2 A:2-15,21-32,33-43 2acf d2acfa1 A:215-221,229-240,241-255 2acf d2acfd1 D:215-221,229-240,241-255 2acf d2acfc1 C:215-221,229-240,241-255 2acf d2acfb1 B:215-221,229-240,241-255 73. d.328.1 CorA soluble domain-like CorA soluble domain-like beta(2)-alpha-beta-alpha(2)-beta(4)-alpha(3); 3 layers: a/b/a; mixed beta-sheet, order 2137654; strands 3 and 7 are parallel 2bbj d2bbjd1 D:59-66,69-81,83-93 2bbh d2bbha1 A:59-66,69-81,83-93 2bbj d2bbjf1 F:58-66,69-81,83-93 2hn2 d2hn2d1 D:4058-4066,4069-4081,4083-4093 2iub d2iube1 E:58-66,69-81,83-93 2iub d2iubf1 F:58-66,69-81,83-93 2iub d2iubg1 G:58-66,69-81,83-93 2hn2 d2hn2e1 E:5058-5066,5069-5081,5083-5093 2hn2 d2hn2a1 A:1058-1066,1069-1081,1083-1093 2iub d2iubc1 C:58-66,69-81,83-93 2iub d2iubj1 J:58-66,69-81,83-93 2hn2 d2hn2b1 B:2058-2066,2069-2081,2083-2093 2hn2 d2hn2c1 C:3058-3066,3069-3081,3083-3093 2iub d2iuba1 A:58-66,69-81,83-93 2iub d2iubd1 D:58-66,69-81,83-93 2iub d2iubi1 I:58-66,69-81,83-93 2bbj d2bbjb1 B:58-66,69-81,83-93 2iub d2iubh1 H:58-66,69-81,83-93 2bbj d2bbja1 A:58-66,69-81,83-93 2iub d2iubb1 B:58-66,69-81,83-93 2bbj d2bbje1 E:58-66,69-81,83-93 75. c.81.1 Formate dehydrogenase/DMSO reductase, domains 1-3 molybdopterine enzyme ! Formate dehydrogenase/DMSO reductase, domains 1-3 contains of two similar intertwined domains related by pseudo dyad; duplication ! core: 3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32451 1ti2 d1ti2a2 A:571-579,611-624,630-638 1ti6 d1ti6g2 G:571-579,611-624,630-638 1vle d1vleo2 O:571-579,611-624,630-638 1vlf d1vlfq2 Q:571-579,611-624,630-638 1ti4 d1ti4g2 G:571-579,611-624,630-638 1vle d1vles2 S:571-579,611-624,630-638 1ti6 d1ti6c2 C:571-579,611-624,630-638 1ti4 d1ti4c2 C:571-579,611-624,630-638 1vld d1vldq2 Q:571-579,611-624,630-638 1vlf d1vlfs2 S:571-579,611-624,630-638 1ti4 d1ti4k2 K:571-579,611-624,630-638 1ti4 d1ti4e2 E:571-579,611-624,630-638 1vlf d1vlfo2 O:571-579,611-624,630-638 1vle d1vleu2 U:571-579,611-624,630-638 1vlf d1vlfu2 U:571-579,611-624,630-638 1ti6 d1ti6a2 A:571-579,611-624,630-638 1ti6 d1ti6e2 E:571-579,611-624,630-638 1vld d1vlds2 S:571-579,611-624,630-638 1vle d1vlem2 M:571-579,611-624,630-638 1ti2 d1ti2k2 K:571-579,611-624,630-638 1vle d1vleq2 Q:571-579,611-624,630-638 1vld d1vldo2 O:571-579,611-624,630-638 1vlf d1vlfm2 M:571-579,611-624,630-638 1ti6 d1ti6k2 K:571-579,611-624,630-638 1ti4 d1ti4a2 A:571-579,611-624,630-638 1vle d1vlew2 W:571-579,611-624,630-638 1vlf d1vlfw2 W:571-579,611-624,630-638 1ti4 d1ti4i2 I:571-579,611-624,630-638 1ti2 d1ti2c2 C:571-579,611-624,630-638 1vld d1vldm2 M:571-579,611-624,630-638 1ti6 d1ti6i2 I:571-579,611-624,630-638 1vld d1vldu2 U:571-579,611-624,630-638 1ti2 d1ti2g2 G:571-579,611-624,630-638 1ti2 d1ti2i2 I:571-579,611-624,630-638 1ti2 d1ti2e2 E:571-579,611-624,630-638 1vld d1vldw2 W:571-579,611-624,630-638 1e60 d1e60c2 C:492-501,533-553,558-566 1tmo d1tmoa2 A:502-510,542-563,566-574 1e60 d1e60a2 A:492-501,533-553,558-566 1eu1 d1eu1a2 A:492-501,533-553,558-566 2dmr d2dmra2 A:492-501,533-553,558-566 1h5n d1h5nc2 C:492-501,533-553,558-566 1h5n d1h5na2 A:492-501,533-553,558-566 4dmr d4dmra2 A:492-501,533-553,558-566 3dmr d3dmra2 A:492-501,533-553,558-566 1dmr d1dmra2 A:492-501,533-553,558-566 1e18 d1e18a2 A:492-501,533-553,558-566 1dms d1dmsa2 A:492-501,533-553,558-566 1e5v d1e5vc2 C:492-501,533-553,558-566 1e61 d1e61a2 A:492-501,533-553,558-566 1e5v d1e5va2 A:492-501,533-553,558-566 1e61 d1e61c2 C:492-501,533-553,558-566 1ogy d1ogyi2 I:514-522,598-612,620-628 1ogy d1ogya2 A:514-522,598-612,620-628 1ogy d1ogyo2 O:514-522,598-612,620-628 1ogy d1ogye2 E:514-522,598-612,620-628 1ogy d1ogym2 M:514-522,598-612,620-628 1ogy d1ogyg2 G:514-522,598-612,620-628 1ogy d1ogyk2 K:514-522,598-612,620-628 1ogy d1ogyc2 C:514-522,598-612,620-628 1tmo d1tmoa2 A:221-228,245-264,327-334 76. d.113.1 Nudix Nudix beta(2)-alpha-beta(3)-alpha; 3 layers: alpha/beta/alpha; mixed sheet ! contains beta-grasp motif 1mqe d1mqea_ A:146-151,151-162,166-182 1mp2 d1mp2a_ A:146-151,151-162,166-182 1mr2 d1mr2a_ A:146-151,151-162,166-182 1mk1 d1mk1a_ A:146-151,151-162,166-182 2o5f d2o5fb1 B:61-66,141-152,156-168 1v8m d1v8ma_ A:131-137,137-148,153-168 1v8t d1v8ta_ A:131-137,137-148,153-168 1v8v d1v8va_ A:131-137,137-148,153-168 1v8u d1v8ua_ A:131-137,137-148,153-168 1v8w d1v8wa_ A:131-137,137-148,153-168 1v8y d1v8ya_ A:131-137,137-148,153-168 1v8i d1v8ia_ A:131-137,137-148,153-168 1v8l d1v8la_ A:131-137,137-148,153-169 2o5f d2o5fa1 A:62-66,141-152,156-168 1v8n d1v8na_ A:131-137,137-148,153-168 1v8s d1v8sa_ A:131-137,137-148,153-169 1v8r d1v8ra1 A:131-137,137-148,153-169 1viq d1viqa_ A:57-67,171-182,186-200 1vc9 d1vc9a1 A:95-100,100-108,110-125 1mqw d1mqwa_ A:145-151,151-162,166-182 2gt2 d2gt2a1 A:126-131,131-139,142-150 1vk6 d1vk6a3 A:10-18,67-76,75-96 2gt2 d2gt2b1 B:126-131,131-139,142-150 1x51 d1x51a1 A:48-53,126-134,136-150 2fvv d2fvva1 A:16-27,121-134,133-142 2b0v d2b0va1 A:31-35,111-119,124-137 1ktg d1ktgb_ B:4-13,111-120,121-138 1kt9 d1kt9a_ A:106-111,111-120,121-136 1xsa d1xsaa_ A:8-19,123-132,133-151 1g0s d1g0sb_ B:57-68,172-183,187-201 1g0s d1g0sa_ A:57-68,172-183,187-201 1vc8 d1vc8b1 B:1-12,100-108,110-124 1g9q d1g9qa_ A:57-68,172-183,187-201 1khz d1khzb_ B:57-68,172-183,187-201 1vcd d1vcdb1 B:1-12,100-108,110-124 2gt2 d2gt2c1 C:126-131,131-138,142-150 1vc9 d1vc9b1 B:1-12,100-108,110-124 1viq d1viqc_ C:56-67,171-182,186-200 1ga7 d1ga7b_ B:57-68,172-183,187-201 1g9q d1g9qb_ B:57-68,172-183,187-201 1vc8 d1vc8a1 A:1-12,100-108,110-124 1vcd d1vcda1 A:1-12,100-108,110-124 2gt2 d2gt2d1 D:126-131,131-139,142-151 1vc9 d1vc9a1 A:1-12,100-108,110-125 1viu d1viua_ A:45-56,159-170,174-188 1viu d1viub_ B:45-56,159-170,174-188 2fkb d2fkbc1 C:64-69,142-150,154-168 1viu d1viud_ D:45-56,159-170,174-188 1viu d1viuc_ C:45-56,159-170,174-188 1jkn d1jkna_ A:12-24,138-147,147-162 1rya d1ryaa_ A:43-48,131-139,142-150 1x83 d1x83a1 A:31-42,143-155,168-179 1xsa d1xsaa_ A:117-123,123-132,133-151 1pvf d1pvfa_ A:31-42,143-155,168-179 1rya d1ryab_ B:43-48,131-139,142-151 2vnq d2vnqa1 A:31-42,143-155,168-179 2g74 d2g74a1 A:31-42,143-155,168-179 1ow2 d1ow2a_ A:31-42,143-155,168-179 2vnp d2vnpb1 B:31-41,143-155,168-180 1f3y d1f3ya_ A:13-24,138-147,147-162 1q54 d1q54a_ A:31-42,143-155,168-179 1vc9 d1vc9a1 A:24-28,100-108,110-125 1x84 d1x84a1 A:31-42,143-155,168-179 2vnq d2vnqb1 B:31-41,143-155,168-180 1hx3 d1hx3a_ A:31-42,143-155,168-179 1nfs d1nfsa_ A:31-42,143-155,168-179 1ppw d1ppwa_ A:31-42,143-155,168-179 1i9a d1i9aa_ A:31-42,143-155,168-180 2fkb d2fkba1 A:64-69,142-150,154-168 1vcd d1vcdb1 B:24-28,100-108,110-124 2g73 d2g73a1 A:31-42,143-155,168-179 1ppv d1ppva_ A:31-42,143-155,168-179 2b2k d2b2ka1 A:31-42,143-155,168-179 1nfz d1nfza_ A:31-42,143-155,168-179 1vc9 d1vc9b1 B:24-28,100-108,110-124 2gt2 d2gt2d1 D:43-48,131-139,142-151 2vnp d2vnpa1 A:31-42,143-155,168-179 2fkb d2fkbb1 B:64-69,142-150,154-168 1vc8 d1vc8a1 A:24-28,100-108,110-124 1vc8 d1vc8b1 B:24-28,100-108,110-124 1xsc d1xsca_ A:7-19,123-132,133-151 1i9a d1i9ab_ B:1031-1042,1143-1155,1168-1180 1rrq d1rrqa2 A:263-268,335-343,345-360 1ktg d1ktga_ A:2-15,111-120,121-138 1sz3 d1sz3b_ B:42-47,123-134,138-153 1x84 d1x84b1 B:59-65,143-155,159-169 1ppw d1ppwb_ B:59-65,143-155,159-169 2g73 d2g73b1 B:59-65,143-155,159-169 1pvf d1pvfb_ B:59-65,143-155,159-169 1ppv d1ppvb_ B:59-65,143-155,159-169 2b2k d2b2kb1 B:59-65,143-155,159-169 1nfz d1nfzb_ B:59-65,143-155,159-169 1sz3 d1sz3a_ A:42-47,123-134,138-153 1x83 d1x83b1 B:59-65,143-155,159-169 1vrl d1vrla2 A:263-268,335-343,345-360 1sjy d1sjya_ A:42-47,123-134,138-153 2vnp d2vnpb1 B:59-65,143-155,159-169 2vnq d2vnqb1 B:59-65,143-155,159-169 1rrs d1rrsa2 A:263-268,335-343,345-360 1soi d1soia_ A:42-47,123-134,138-153 1kt9 d1kt9a_ A:2-15,111-120,121-136 1vcd d1vcda1 A:24-28,100-108,110-124 1hx3 d1hx3b_ B:59-65,143-155,159-169 1g9q d1g9qb_ B:89-94,172-183,187-201 1viq d1viqb_ B:88-93,171-182,186-200 1r67 d1r67a_ A:59-65,143-155,159-169 1xsb d1xsba_ A:7-19,123-132,133-151 1ppv d1ppva_ A:59-65,143-155,159-169 1ktg d1ktga_ A:30-34,111-120,121-138 1g9q d1g9qa_ A:89-94,172-183,187-201 1ga7 d1ga7b_ B:89-94,172-183,187-201 1ktg d1ktgb_ B:29-34,111-120,121-138 1x51 d1x51a1 A:18-31,126-134,136-150 1i9a d1i9ab_ B:1059-1065,1143-1155,1159-1169 2azw d2azwa1 A:41-45,123-131,133-147 1g0s d1g0sa_ A:89-93,172-183,187-201 1khz d1khza_ A:89-93,172-183,187-201 1khz d1khzb_ B:89-93,172-183,187-201 1viu d1viuc_ C:78-83,159-170,174-188 1viu d1viua_ A:78-83,159-170,174-188 1viu d1viud_ D:78-83,159-170,174-188 1viq d1viqc_ C:88-92,171-182,186-200 1viu d1viub_ B:78-83,159-170,174-188 1xsa d1xsaa_ A:41-45,123-132,133-151 1g0s d1g0sb_ B:89-93,172-183,187-201 1ga7 d1ga7a_ A:89-93,172-183,187-201 1viq d1viqa_ A:88-92,171-182,186-200 2g74 d2g74b1 B:31-41,143-155,168-181 1ow2 d1ow2b_ B:59-64,143-155,159-169 1nfs d1nfsb_ B:59-64,143-155,159-169 1q54 d1q54b_ B:59-64,143-155,159-169 1ow2 d1ow2b_ B:31-41,143-155,168-181 2g74 d2g74b1 B:59-64,143-155,159-169 1x83 d1x83a1 A:59-64,143-155,159-169 2vnp d2vnpa1 A:59-64,143-155,159-169 1nfs d1nfsa_ A:59-64,143-155,159-169 1hzt d1hzta_ A:59-64,143-155,159-169 2vnq d2vnqa1 A:59-64,143-155,159-169 1pvf d1pvfa_ A:59-64,143-155,159-169 1x84 d1x84a1 A:59-64,143-155,159-169 2b2k d2b2ka1 A:59-64,143-155,159-169 1nfz d1nfza_ A:59-64,143-155,159-169 1i9a d1i9aa_ A:59-64,143-155,159-169 2g74 d2g74a1 A:59-64,143-155,159-169 1k2e d1k2eb_ B:108-113,112-120,124-140 2g73 d2g73a1 A:59-64,143-155,159-169 1ppw d1ppwa_ A:59-64,143-155,159-169 1k26 d1k26b_ B:108-113,112-120,124-140 1hx3 d1hx3a_ A:59-64,143-155,159-169 1ow2 d1ow2a_ A:59-64,143-155,159-169 1q54 d1q54a_ A:59-64,143-155,159-169 2a8q d2a8qb1 B:66-70,166-174,178-193 2a8t d2a8ta1 A:66-70,166-176,180-193 2azw d2azwa1 A:25-29,123-131,133-147 1su2 d1su2b_ B:41-47,123-134,138-153 1u20 d1u20a1 A:66-70,166-176,180-193 2a8t d2a8tb1 B:66-70,166-176,180-193 1mqe d1mqea_ A:68-74,151-162,166-182 1mp2 d1mp2a_ A:68-74,151-162,166-182 1mk1 d1mk1a_ A:68-74,151-162,166-182 1u20 d1u20b1 B:66-70,166-176,180-193 1jrk d1jrkc_ C:108-113,112-120,124-148 1mr2 d1mr2a_ A:68-74,151-162,166-182 1k26 d1k26b_ B:23-27,112-120,124-140 1mk1 d1mk1a_ A:34-53,151-162,166-182 1ga7 d1ga7a_ A:47-68,172-183,187-201 1k2e d1k2eb_ B:23-27,112-120,124-140 1mqe d1mqea_ A:34-53,151-162,166-182 1khz d1khza_ A:47-68,172-183,187-201 1mr2 d1mr2a_ A:34-53,151-162,166-182 1mp2 d1mp2a_ A:34-53,151-162,166-182 1mqw d1mqwa_ A:32-53,151-162,166-182 2a8q d2a8qa1 A:66-70,166-174,180-193 2a8r d2a8ra1 A:66-70,166-174,180-193 1jrk d1jrkd_ D:108-113,112-120,124-150 2a8r d2a8rb1 B:66-70,166-174,180-193 1k26 d1k26a_ A:23-27,112-120,124-150 2a8p d2a8pb1 B:66-70,166-174,180-193 2a8s d2a8sa1 A:66-70,166-174,180-193 2a8s d2a8sb1 B:66-70,166-174,180-193 2a8p d2a8pa1 A:66-70,166-174,180-193 1jrk d1jrkd_ D:23-27,112-120,124-150 1k2e d1k2ea_ A:23-27,112-120,124-152 2b06 d2b06a1 A:4-19,112-120,124-135 1su2 d1su2a_ A:39-47,123-134,138-153 79. b.52.1 Barwin-like endoglucanases Double psi beta-barrel barrel, closed; n=6, S=10; complex topology with crossover (psi) loops 2g5d d2g5da1 A:156-162,231-238,252-263 2pnw d2pnwa1 A:115-121,156-163,177-188 2pic d2pica1 A:117-122,132-139,219-231 2g6g d2g6ga1 A:156-164,231-238,252-263 2pi8 d2pi8c1 C:117-122,132-139,219-231 2pi8 d2pi8b1 B:117-122,132-139,219-231 1n10 d1n10a2 A:1019-1027,1110-1117,1118-1129 2ae0 d2ae0x1 X:117-123,132-139,152-163 1n10 d1n10b2 B:2019-2027,2110-2117,2118-2129 2pi8 d2pi8b1 B:117-122,132-139,152-163 2pi8 d2pi8a1 A:117-122,132-139,152-163 2pi8 d2pi8c1 C:117-122,132-139,152-163 2pi8 d2pi8d1 D:117-122,132-139,152-163 2pjj d2pjja1 A:117-123,132-139,152-163 2pic d2pica1 A:117-122,132-139,152-163 2gae d2gaea1 A:138-143,152-159,172-183 1hd5 d1hd5a_ A:147-151,153-160,161-176 2eng d2enga_ A:146-150,152-159,160-175 4eng d4enga_ A:87-96,190-198,201-208 1l8f d1l8fa_ A:86-95,189-197,200-207 1oa9 d1oa9a_ A:86-95,189-197,200-207 3eng d3enga_ A:87-96,190-198,201-208 1hd5 d1hd5a_ A:87-96,191-199,202-209 2eng d2enga_ A:87-96,190-198,201-208 1oa7 d1oa7a_ A:86-96,189-197,200-207 80. e.29.1 beta and beta-prime subunits of DNA dependent RNA-polymerase The catalytic site is formed by the association of two double-psi beta-barrel domains, one from each subunit ! beta and beta-prime subunits of DNA dependent RNA-polymerase Multidomain subunits of complex domain organization 1ynn d1ynnc1 C:171-178,216-225,300-316 2cw0 d2cw0c1 C:171-178,215-223,300-316 2o5j d2o5jm1 M:171-178,215-225,300-316 1ynj d1ynjc1 C:171-178,216-225,300-316 2a69 d2a69m1 M:171-178,192-201,300-316 1iw7 d1iw7c_ C:170-178,215-225,300-316 2a68 d2a68m1 M:171-178,192-201,300-316 2o5j d2o5jc1 C:171-178,192-201,300-316 2e2i d2e2ia1 A:1326-1330,1331-1340,1340-1360 1i6h d1i6ha_ A:1326-1330,1331-1340,1340-1360 2a6e d2a6em1 M:171-178,192-201,300-316 2e2j d2e2ja1 A:1326-1330,1331-1340,1340-1360 1zyr d1zyrm1 M:170-178,215-225,300-316 2a6h d2a6hm1 M:171-178,192-201,300-316 1twf d1twfa_ A:1326-1330,1331-1340,1340-1360 1twc d1twca_ A:1326-1330,1331-1340,1340-1360 1zyr d1zyrc1 C:170-178,215-225,300-316 1i50 d1i50a_ A:1326-1330,1331-1340,1340-1360 1iw7 d1iw7c_ C:170-178,192-201,300-316 2nvy d2nvya1 A:1326-1330,1331-1340,1340-1360 1i3q d1i3qa_ A:1326-1330,1331-1340,1340-1360 1k83 d1k83a_ A:1326-1330,1331-1340,1340-1360 2vum d2vumb1 B:252-260,281-290,370-391 2b63 d2b63a1 A:1326-1330,1331-1340,1340-1360 1zyr d1zyrn1 N:1320-1326,1331-1340,1340-1360 2nvx d2nvxa1 A:1326-1330,1331-1340,1340-1360 2e2h d2e2ha1 A:1326-1330,1331-1340,1340-1360 2nvt d2nvta1 A:1326-1330,1331-1340,1340-1360 2ja6 d2ja6a1 A:1326-1330,1331-1340,1340-1360 2ja8 d2ja8a1 A:1326-1330,1331-1340,1340-1360 2ja7 d2ja7m1 M:1326-1330,1331-1340,1340-1360 2b8k d2b8ka1 A:1326-1330,1331-1340,1340-1360 2yu9 d2yu9a1 A:1326-1330,1331-1340,1340-1360 2ja5 d2ja5a1 A:1326-1330,1331-1340,1340-1360 2nvy d2nvya1 A:952-957,1015-1027,1038-1057 2ja7 d2ja7a1 A:1326-1330,1331-1340,1340-1360 2nvq d2nvqa1 A:1326-1330,1331-1340,1340-1360 2be5 d2be5m1 M:171-178,192-201,300-316 2nvz d2nvza1 A:1326-1330,1331-1340,1340-1360 2nvt d2nvtb1 B:252-260,281-290,370-391 2a69 d2a69c1 C:171-178,192-201,300-316 2gho d2ghoc1 C:171-178,192-201,300-316 2yu9 d2yu9b1 B:252-260,281-290,370-391 1ynj d1ynjc1 C:171-178,192-201,300-316 2gho d2ghoc1 C:171-178,215-225,300-316 1twc d1twca_ A:952-957,1015-1027,1038-1057 2b63 d2b63a1 A:952-957,1015-1027,1038-1057 1twa d1twaa_ A:952-957,1015-1027,1038-1057 1zyr d1zyrm1 M:170-178,192-201,300-316 1twf d1twfa_ A:952-957,1015-1027,1038-1057 2a6e d2a6ec1 C:171-178,192-201,300-316 2be5 d2be5c1 C:171-178,192-201,300-316 1twh d1twha_ A:952-957,1015-1027,1038-1057 1twh d1twhb_ B:251-260,281-290,370-391 1iw7 d1iw7m_ M:171-178,192-201,300-316 1i3q d1i3qa_ A:952-957,1015-1027,1038-1057 2cw0 d2cw0c1 C:171-178,192-201,300-316 1i6h d1i6ha_ A:952-957,1015-1027,1038-1057 2o5j d2o5jm1 M:171-178,192-201,300-316 2a68 d2a68c1 C:171-178,192-201,300-316 1i50 d1i50a_ A:952-957,1015-1027,1038-1057 1twg d1twga_ A:952-957,1015-1027,1038-1057 1ynn d1ynnc1 C:171-178,192-201,300-316 2gho d2ghod1 D:1321-1326,1331-1340,1340-1360 3dxj d3dxjn1 N:1321-1326,1331-1340,1340-1360 2cw0 d2cw0n1 N:1320-1326,1331-1340,1340-1360 1k83 d1k83a_ A:952-957,1015-1027,1038-1057 2e2j d2e2jb1 B:251-260,281-290,370-391 2nvq d2nvqa1 A:952-957,1015-1027,1038-1057 3dxj d3dxjd1 D:1117-1122,1136-1145,1167-1181 1twc d1twcb_ B:251-260,281-290,370-391 3dxj d3dxjn1 N:1117-1122,1136-1145,1167-1181 1twa d1twab_ B:251-260,281-290,370-391 2e2i d2e2ia1 A:952-957,1015-1027,1038-1057 2nvx d2nvxb1 B:251-260,281-290,370-391 1iw7 d1iw7d_ D:1117-1122,1136-1145,1167-1181 1iw7 d1iw7n_ N:1117-1122,1136-1145,1167-1181 2e2h d2e2hb1 B:251-260,281-290,370-391 2be5 d2be5n1 N:1117-1122,1136-1145,1167-1181 3dxj d3dxjc1 C:170-178,192-201,300-316 3cqz d3cqzb1 B:251-260,281-290,370-391 1i3q d1i3qb_ B:251-260,281-290,370-391 1zyr d1zyrd1 D:1321-1326,1331-1340,1340-1360 2a69 d2a69n1 N:1117-1122,1136-1145,1167-1181 1smy d1smyd_ D:1320-1326,1331-1340,1340-1360 2nvz d2nvzb1 B:251-260,281-290,370-391 2a68 d2a68n1 N:1117-1122,1136-1145,1167-1181 1iw7 d1iw7n_ N:1321-1326,1331-1340,1340-1360 2cw0 d2cw0m1 M:171-178,192-201,300-316 2a6e d2a6en1 N:1117-1122,1136-1145,1167-1181 2be5 d2be5d1 D:1117-1122,1136-1145,1167-1181 2nvx d2nvxa1 A:952-957,1015-1027,1038-1057 2a6h d2a6hn1 N:1117-1122,1136-1145,1167-1181 2e2j d2e2ja1 A:952-957,1015-1027,1038-1057 2a68 d2a68d1 D:1321-1326,1331-1340,1340-1360 2a69 d2a69d1 D:1117-1122,1136-1145,1167-1181 3dxj d3dxjd1 D:1321-1326,1331-1340,1340-1360 2e2i d2e2ib1 B:251-260,281-290,370-391 2a6e d2a6ed1 D:1321-1326,1331-1340,1340-1360 2a6e d2a6ed1 D:1117-1122,1136-1145,1167-1181 2a6h d2a6hd1 D:1117-1122,1136-1145,1167-1181 2a69 d2a69d1 D:1321-1326,1331-1340,1340-1360 2cw0 d2cw0d1 D:1321-1326,1331-1340,1340-1360 1i6v d1i6vd_ D:1117-1122,1136-1145,1167-1181 1ynn d1ynnd1 D:1117-1122,1136-1145,1167-1181 2a68 d2a68d1 D:1117-1122,1136-1145,1167-1181 1zyr d1zyrc1 C:170-178,192-201,300-316 2o5j d2o5jn1 N:1118-1122,1136-1145,1167-1181 1smy d1smym_ M:171-178,192-201,300-316 2ppb d2ppbd1 D:1117-1122,1136-1145,1167-1181 1ynj d1ynjd1 D:1117-1122,1136-1145,1167-1181 2yu9 d2yu9a1 A:952-957,1015-1027,1038-1057 2o5i d2o5id1 D:1321-1326,1331-1340,1340-1360 2a6h d2a6hd1 D:1321-1326,1331-1340,1340-1360 1smy d1smyn_ N:1321-1326,1331-1340,1340-1360 2a6h d2a6hc1 C:171-178,192-201,300-316 2be5 d2be5d1 D:1321-1326,1331-1340,1340-1360 2ppb d2ppbn1 N:1117-1122,1136-1145,1167-1181 2o5j d2o5jd1 D:1117-1122,1136-1145,1167-1181 1smy d1smyn_ N:1117-1122,1136-1145,1167-1181 1smy d1smyd_ D:1117-1122,1136-1145,1167-1181 2a68 d2a68n1 N:1321-1326,1331-1340,1340-1360 2cw0 d2cw0n1 N:1117-1122,1136-1145,1167-1181 1iw7 d1iw7d_ D:1321-1326,1331-1340,1340-1360 2nvt d2nvta1 A:952-957,1015-1027,1038-1057 2o5i d2o5in1 N:1117-1122,1136-1145,1167-1181 2nvz d2nvza1 A:952-957,1015-1027,1038-1057 2a6h d2a6hn1 N:1321-1326,1331-1340,1340-1360 2a69 d2a69n1 N:1321-1326,1331-1340,1340-1360 2ja6 d2ja6a1 A:952-957,1015-1027,1038-1058 2e2h d2e2ha1 A:952-957,1015-1027,1038-1057 1zyr d1zyrd1 D:1117-1122,1136-1145,1167-1181 2a6e d2a6en1 N:1321-1326,1331-1340,1340-1360 2ja5 d2ja5a1 A:952-957,1015-1027,1038-1058 2be5 d2be5n1 N:1321-1326,1331-1340,1340-1360 2ja7 d2ja7a1 A:952-957,1015-1027,1038-1058 2ja7 d2ja7m1 M:952-957,1015-1027,1038-1058 2ja8 d2ja8a1 A:952-957,1015-1027,1038-1058 2ppb d2ppbd1 D:1321-1326,1331-1340,1340-1360 2b8k d2b8ka1 A:952-957,1015-1027,1038-1058 1zyr d1zyrn1 N:1117-1122,1136-1145,1167-1181 2o5i d2o5id1 D:1117-1122,1136-1145,1167-1181 2o5i d2o5in1 N:1321-1326,1331-1340,1340-1360 2cw0 d2cw0d1 D:1117-1122,1136-1145,1167-1181 2gho d2ghoc1 C:844-850,872-880,881-898 3dxj d3dxjm1 M:168-178,192-201,300-316 2e2h d2e2ha1 A:584-592,628-638,638-661 2nvy d2nvya1 A:584-592,628-638,638-661 2nvz d2nvza1 A:584-592,628-637,638-661 2ppb d2ppbn1 N:1321-1326,1331-1340,1340-1360 1twf d1twfb_ B:249-260,281-290,370-391 1i6h d1i6hb_ B:249-260,281-290,370-391 1twg d1twgb_ B:249-260,281-290,370-391 1i50 d1i50b_ B:249-260,281-290,370-391 2nvq d2nvqb1 B:249-260,281-290,370-391 1k83 d1k83b_ B:249-260,281-290,370-391 2nvy d2nvyb1 B:249-260,281-290,370-391 2r92 d2r92b1 B:249-260,281-290,370-391 1i6v d1i6vd_ D:837-841,846-856,876-891 2ja7 d2ja7n1 N:249-260,281-290,370-391 2ja7 d2ja7b1 B:249-260,281-290,370-391 2ja5 d2ja5b1 B:249-260,281-290,370-391 2ja6 d2ja6b1 B:249-260,281-290,370-391 2r93 d2r93b1 B:249-260,281-290,370-391 2ja8 d2ja8b1 B:249-260,281-290,370-391 2r7z d2r7zb1 B:249-260,281-290,370-391 2b8k d2b8kb1 B:249-260,281-290,370-391 1i6v d1i6vc_ C:168-177,192-201,302-316 2b63 d2b63b1 B:249-260,281-290,370-391 1i6v d1i6vc_ C:168-177,216-225,302-316 1zyr d1zyrd1 D:1122-1126,1136-1145,1167-1181 2vum d2vumb1 B:252-260,307-322,370-391 1zyr d1zyrn1 N:1122-1126,1136-1145,1167-1181 2yu9 d2yu9b1 B:252-260,307-322,370-391 2nvt d2nvtb1 B:252-260,307-322,370-391 1twc d1twcb_ B:251-260,307-322,370-391 1twa d1twab_ B:251-260,307-322,370-391 1twh d1twhb_ B:251-260,307-322,370-391 1i6v d1i6vd_ D:1122-1128,1136-1145,1167-1181 1i3q d1i3qb_ B:251-260,307-322,370-391 3cqz d3cqzb1 B:251-260,307-322,370-391 2e2i d2e2ib1 B:251-260,307-322,370-391 2nvx d2nvxb1 B:251-260,307-322,370-391 2e2j d2e2jb1 B:251-260,307-322,370-391 2nvz d2nvzb1 B:251-260,307-322,370-391 2nvy d2nvyb1 B:249-260,307-322,370-391 1twg d1twgb_ B:249-260,307-322,370-391 81. d.157.1 Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase duplication of beta(4)-alpha-beta-alpha motif; 4 layers a/b/b/a; mixed beta-sheets 1e5d d1e5da2 A:158-164,201-216,232-249 2p97 d2p97a1 A:130-135,156-171,187-200 2bc2 d2bc2a_ A:161-168,185-201,215-227 1e5d d1e5db2 B:158-164,201-216,232-249 1bc2 d1bc2a_ A:161-168,185-201,215-227 2p97 d2p97b1 B:130-135,156-171,187-200 1bc2 d1bc2b_ B:161-168,185-201,215-227 2yz3 d2yz3a1 A:171-178,195-211,225-236 1dxk d1dxka_ A:161-168,185-201,215-227 1bmc d1bmca_ A:161-168,185-201,215-227 1bvt d1bvta_ A:161-168,185-201,215-227 1mqo d1mqoa_ A:211-221,238-254,279-291 3bc2 d3bc2a_ A:161-168,185-201,215-227 2bc2 d2bc2b_ B:161-167,185-201,215-227 2yz3 d2yz3b1 B:171-177,195-211,225-236 1vme d1vmeb2 B:162-167,205-220,235-249 1vme d1vmea2 A:162-167,205-220,235-249 1ko3 d1ko3a_ A:211-221,238-254,279-295 3znb d3znba_ A:174-180,198-214,228-246 1ko2 d1ko2a_ A:211-220,238-254,279-295 1a8t d1a8ta_ A:157-164,181-197,211-230 1x8g d1x8ga_ A:211-220,238-253,290-304 2gkl d2gkla1 A:211-220,238-253,290-304 1m2x d1m2xc_ C:211-221,238-254,279-295 2qds d2qdsa1 A:211-220,238-253,290-304 1kr3 d1kr3b_ B:174-181,198-214,228-247 1hlk d1hlka_ A:174-181,198-214,228-247 4znb d4znbb_ B:174-181,198-214,228-247 1hlk d1hlkb_ B:174-181,198-214,228-247 1kr3 d1kr3a_ A:174-181,198-214,228-247 2doo d2doob1 B:151-157,172-188,202-219 3znb d3znbb_ B:174-181,198-214,228-248 2doo d2dooa1 A:151-157,172-188,202-219 2znb d2znbb_ B:174-181,198-214,228-247 1a7t d1a7ta_ A:157-164,181-197,211-230 2dkf d2dkfa1 A:78-83,83-102,107-118 2q0j d2q0ja1 A:187-192,257-278,278-297 1dd6 d1dd6a_ A:151-157,172-188,202-219 1a7t d1a7tb_ B:157-164,181-197,211-230 1znb d1znbb_ B:174-181,198-214,228-248 1ych d1ychd2 D:160-166,203-218,235-249 1ych d1ychb2 B:160-166,203-218,235-249 1ych d1ychc2 C:160-166,203-218,235-249 1ycg d1ycgd2 D:160-166,203-218,235-249 1ycf d1ycfc2 C:160-166,203-218,235-249 1ycg d1ycgb2 B:160-166,203-218,235-249 1ycf d1ycfb2 B:160-166,203-218,235-249 1ycg d1ycgc2 C:160-166,203-218,235-249 1ych d1ycha2 A:160-166,203-218,235-249 1znb d1znba_ A:174-181,198-214,228-248 1m2x d1m2xb_ B:211-220,238-254,279-297 1ycg d1ycga2 A:160-166,203-218,235-249 1m2x d1m2xd_ D:211-220,238-254,279-297 4znb d4znba_ A:174-180,198-214,228-248 1m2x d1m2xa_ A:211-221,238-254,279-297 1dd6 d1dd6b_ B:151-157,172-188,202-220 2bmi d2bmia_ A:157-164,181-197,211-231 1vgn d1vgna1 A:151-157,172-188,202-220 2znb d2znba_ A:174-180,198-214,228-248 1x8h d1x8ha_ A:211-219,238-253,290-304 1ycf d1ycfd2 D:160-166,203-218,235-249 1x8i d1x8ia_ A:211-219,238-253,290-304 1jjt d1jjtb_ B:151-157,172-188,202-221 2q0j d2q0jb1 B:187-192,257-274,278-297 1a8t d1a8tb_ B:157-163,181-197,211-230 2bmi d2bmib_ B:157-164,181-197,211-232 1jje d1jjeb_ B:151-157,172-188,202-221 1vgn d1vgnb1 B:151-157,172-188,202-221 1jje d1jjea_ A:151-157,172-188,202-222 1ddk d1ddka_ A:151-158,172-188,202-221 2i7x d2i7xa1 A:85-90,90-109,120-131 1jjt d1jjta_ A:151-157,172-188,202-222 2cfz d2cfza2 A:292-298,318-334,350-379 2cg2 d2cg2a2 A:292-298,318-334,350-379 2cg3 d2cg3a2 A:292-298,318-334,350-379 2q0i d2q0ia1 A:187-192,257-270,277-298 2cfu d2cfua2 A:292-298,318-334,350-379 2q0i d2q0ia1 A:171-177,197-211,232-255 2q0j d2q0jb1 B:171-177,197-212,232-255 2q0j d2q0ja1 A:171-177,197-211,232-255 2h6a d2h6aa1 A:211-220,239-254,295-317 2fu6 d2fu6a1 A:211-220,239-254,295-317 2h6a d2h6ab1 B:211-220,239-254,295-317 2fu9 d2fu9a1 A:211-220,239-254,295-317 2fu8 d2fu8a1 A:211-220,239-254,295-317 2hb9 d2hb9a1 A:211-220,239-254,295-317 1sml d1smla_ A:175-184,201-216,245-267 2fm6 d2fm6a1 A:211-220,239-254,295-317 2fu9 d2fu9b1 B:211-220,239-254,295-317 2fm6 d2fm6b1 B:211-220,239-254,295-317 2aio d2aioa1 A:211-220,238-254,289-311 2fu6 d2fu6b1 B:211-220,239-254,295-317 2gfk d2gfka1 A:211-220,239-254,295-317 2fu7 d2fu7b1 B:211-220,239-254,295-317 2fu8 d2fu8b1 B:211-220,239-254,295-317 2qdt d2qdta1 A:175-184,201-216,245-267 2fu7 d2fu7a1 A:211-220,239-254,295-317 2gfj d2gfja1 A:211-220,239-254,295-317 2gfj d2gfjb1 B:211-220,239-254,295-317 2gfk d2gfkb1 B:211-220,239-254,295-317 85. d.220.1 Metal cation-transporting ATPase, ATP-binding domain N Metal cation-transporting ATPase, ATP-binding domain N unusual fold; core: beta-alpha(2)-beta(3)-alpha(2)-beta(2); 6-stranded antiparallel beta-sheet, order: 165432 2a29 d2a29a1 A:316-325,329-345,346-361 2a00 d2a00a1 A:316-325,329-345,346-361 1svj d1svja_ A:317-325,329-344,346-362 2b8e d2b8ea2 A:434-442,445-460,462-476 2b8e d2b8ec2 C:434-442,445-460,462-476 1u7q d1u7qa_ A:317-325,329-344,346-361 2b8e d2b8eb2 B:434-442,445-460,462-476 1q3i d1q3ia_ A:378-387,408-424,443-458 1iwo d1iwob3 B:361-374,407-422,439-453 1iwo d1iwoa3 A:361-374,407-422,439-453 3b9r d3b9ra3 A:361-374,407-422,439-453 1wpg d1wpgb3 B:361-374,407-421,439-453 1wpg d1wpgc3 C:361-374,407-421,439-453 3b9b d3b9ba3 A:361-374,407-421,439-453 2zbg d2zbga3 A:361-374,407-421,439-453 3b9r d3b9rb3 B:361-374,407-421,439-453 1wpg d1wpgd3 D:361-374,407-421,439-453 2zbf d2zbfa3 A:361-374,407-421,439-453 1xp5 d1xp5a3 A:361-374,407-421,439-453 1wpg d1wpga3 A:361-374,407-421,439-453 2zbd d2zbda3 A:361-374,407-421,439-453 1t5t d1t5ta3 A:361-374,407-421,439-453 1t5s d1t5sa3 A:361-374,407-421,439-453 1vfp d1vfpb3 B:361-374,407-421,439-453 1vfp d1vfpa3 A:361-374,407-421,439-453 1mo7 d1mo7a_ A:388-393,414-429,450-464 2zbe d2zbeb3 B:361-374,407-421,439-453 2zbe d2zbea3 A:361-374,407-421,439-453 1kju d1kjua3 A:393-397,407-422,439-453 2b8e d2b8ec2 C:497-502,502-510,514-528 2b8e d2b8ea2 A:497-502,502-510,514-528 1kju d1kjua3 A:363-374,407-422,439-453 2b8e d2b8eb2 B:497-502,503-510,514-528 88. b.3.6 Aromatic compound dioxygenase Prealbumin-like sandwich; 7 strands in 2 sheets, greek-key ! variations: some members have additional 1-2 strands to common fold 1yko d1ykoe1 E:138-144,155-162,163-171 1yko d1ykoc1 C:138-144,155-162,163-171 1ykk d1ykke1 E:138-144,155-162,163-171 1ykm d1ykmc1 C:138-144,155-162,163-171 1ykp d1ykpg1 G:138-144,155-162,163-171 1ykp d1ykpk1 K:138-144,155-162,163-171 1ykp d1ykpc1 C:138-144,155-162,163-171 1ykp d1ykpe1 E:138-144,155-162,163-171 1yko d1ykog1 G:138-144,155-162,163-171 1eob d1eoba_ A:138-146,155-162,163-171 2bur d2bura1 A:138-146,155-162,163-171 1eoa d1eoaa_ A:138-146,155-162,163-171 2buv d2buva1 A:138-146,155-162,163-171 2buw d2buwa1 A:138-146,155-162,163-171 1eoc d1eoca_ A:138-146,155-162,163-171 1eo2 d1eo2b_ B:472-481,489-496,497-505 2buq d2buqa1 A:138-146,155-162,163-171 2buu d2buua1 A:138-146,155-162,163-171 1eo9 d1eo9a_ A:138-146,155-162,163-171 3pch d3pchb_ B:138-146,155-162,163-171 2but d2buta1 A:138-146,155-162,163-171 1ykk d1ykkk1 K:138-146,155-162,163-171 1eo2 d1eo2a_ A:138-146,155-162,163-171 2bum d2bumb1 B:473-481,489-496,497-505 1ykn d1yknk1 K:138-146,155-162,163-171 2buz d2buzb1 B:473-481,489-496,497-505 2buq d2buqb1 B:473-481,489-496,497-505 3pch d3pche_ E:138-146,155-162,163-171 3pca d3pcab_ B:138-146,155-162,163-171 3pca d3pcae_ E:138-146,155-162,163-171 1ykn d1yknc1 C:138-146,155-162,163-171 3pcl d3pclb_ B:138-146,155-162,163-171 3pcf d3pcfa_ A:138-146,155-162,163-171 2bum d2buma1 A:138-146,155-162,163-171 1eob d1eobb_ B:472-481,489-496,497-505 2buy d2buyb1 B:473-481,489-496,497-505 3pca d3pcad_ D:138-146,155-162,163-171 1ykk d1ykka1 A:138-146,155-162,163-171 3pcn d3pcnb_ B:138-146,155-162,163-171 3pch d3pcha_ A:138-146,155-162,163-171 3pcm d3pcme_ E:138-146,155-162,163-171 1ykk d1ykki1 I:138-146,155-162,163-171 3pcf d3pcfd_ D:138-146,155-162,163-171 3pcl d3pcla_ A:138-146,155-162,163-171 3pch d3pchc_ C:138-146,155-162,163-171 3pcl d3pcle_ E:138-146,155-162,163-171 1eoc d1eocb_ B:472-481,489-496,497-505 2buy d2buya1 A:138-146,155-162,163-171 1ykn d1ykni1 I:138-146,155-162,163-171 3pca d3pcac_ C:138-146,155-162,163-171 3pcj d3pcjd_ D:138-146,155-162,163-171 2bv0 d2bv0b1 B:473-481,489-496,497-505 3pcl d3pclf_ F:138-146,155-162,163-171 1ykl d1yklg1 G:138-146,155-162,163-171 3pcg d3pcga_ A:138-146,155-162,163-171 3pcf d3pcfe_ E:138-146,155-162,163-171 3pcn d3pcnd_ D:138-146,155-162,163-171 3pcl d3pcld_ D:138-146,155-162,163-171 1ykk d1ykkg1 G:138-146,155-162,163-171 3pcm d3pcmc_ C:138-146,155-162,163-171 3pcn d3pcne_ E:138-146,155-162,163-171 3pcd d3pcdd_ D:138-146,155-162,163-171 3pca d3pcaa_ A:138-146,155-162,163-171 3pcg d3pcgf_ F:138-146,155-162,163-171 2bv0 d2bv0a1 A:138-146,155-162,163-171 1ykl d1ykli1 I:138-146,155-162,163-171 2bux d2buxb1 B:472-481,489-496,497-505 3pci d3pcib_ B:138-146,155-162,163-171 3pci d3pcie_ E:138-146,155-162,163-171 3pck d3pcke_ E:138-146,155-162,163-171 3pcb d3pcbb_ B:138-146,155-162,163-171 3pcn d3pcnc_ C:138-146,155-162,163-171 3pcf d3pcfc_ C:138-146,155-162,163-171 3pcg d3pcgd_ D:138-146,155-162,163-171 3pcd d3pcdc_ C:138-146,155-162,163-171 3pcd d3pcdb_ B:138-146,155-162,163-171 3pcg d3pcgc_ C:138-146,155-162,163-171 3pci d3pcic_ C:138-146,155-162,163-171 3pch d3pchd_ D:138-146,155-162,163-171 3pcn d3pcna_ A:138-146,155-162,163-171 3pcm d3pcmb_ B:138-146,155-162,163-171 3pcl d3pclc_ C:138-146,155-162,163-171 3pci d3pcid_ D:138-146,155-162,163-171 3pck d3pcka_ A:138-146,155-162,163-171 1ykk d1ykkh1 H:472-481,489-496,497-505 3pcm d3pcmd_ D:138-146,155-162,163-171 3pca d3pcaf_ F:138-146,155-162,163-171 3pcd d3pcde_ E:138-146,155-162,163-171 1eo9 d1eo9b_ B:472-481,489-496,497-505 3pcf d3pcfb_ B:138-146,155-162,163-171 3pcg d3pcgb_ B:138-146,155-162,163-171 3pcj d3pcjb_ B:138-146,155-162,163-171 1ykl d1ykle1 E:138-146,155-162,163-171 3pcm d3pcma_ A:138-146,155-162,163-171 2bur d2burb1 B:473-481,489-496,497-505 3pce d3pceb_ B:138-146,155-162,163-171 2buz d2buza1 A:138-146,155-162,163-171 1ykl d1yklh1 H:472-481,489-496,497-505 3pch d3pchf_ F:138-146,155-162,163-171 1ykl d1yklc1 C:138-146,155-162,163-171 3pcb d3pcbe_ E:138-146,155-162,163-171 3pcg d3pcge_ E:138-146,155-162,163-171 3pcj d3pcje_ E:138-146,155-162,163-171 1ykn d1ykng1 G:138-146,155-162,163-171 3pce d3pced_ D:138-146,155-162,163-171 1ykn d1yknl1 L:472-481,489-496,497-505 1ykm d1ykma1 A:138-146,155-162,163-171 3pce d3pcee_ E:138-146,155-162,163-171 2pcd d2pcda_ A:138-146,155-162,163-171 2pcd d2pcdb_ B:138-146,155-162,163-171 3pcb d3pcba_ A:138-146,155-162,163-171 1yko d1ykoi1 I:138-146,155-162,163-171 3pcb d3pcbc_ C:138-146,155-162,163-171 3pcc d3pccd_ D:138-146,155-162,163-171 1ykm d1ykmg1 G:138-146,155-162,163-171 1ykn d1ykna1 A:138-146,155-162,163-171 1eoa d1eoab_ B:473-481,489-496,497-505 3pck d3pckb_ B:138-146,155-162,163-171 3pcc d3pcce_ E:138-146,155-162,163-171 3pcj d3pcjc_ C:138-146,155-162,163-171 3pcb d3pcbd_ D:138-146,155-162,163-171 3pcm d3pcmf_ F:138-146,155-162,163-171 1ykm d1ykmi1 I:138-146,155-162,163-171 3pcd d3pcdf_ F:138-146,155-162,163-171 3pce d3pcea_ A:138-146,155-162,163-171 2buu d2buub1 B:473-481,489-496,497-505 3pcf d3pcfp_ P:472-481,489-496,497-505 3pcc d3pcca_ A:138-146,155-162,163-171 2pcd d2pcdd_ D:138-146,155-162,163-171 1yko d1ykok1 K:138-146,155-162,163-171 3pcd d3pcda_ A:138-146,155-162,163-171 3pci d3pcia_ A:138-146,155-162,163-171 3pcj d3pcja_ A:138-146,155-162,163-171 1ykm d1ykmk1 K:138-146,155-162,163-171 1ykp d1ykpi1 I:138-146,155-162,163-171 1ykp d1ykpa1 A:138-146,155-162,163-171 3pce d3pcec_ C:138-146,155-162,163-171 3pcf d3pcff_ F:138-146,155-162,163-171 1ykl d1yklk1 K:138-146,155-162,163-171 3pci d3pcif_ F:138-146,155-162,163-171 1yko d1ykoa1 A:138-146,155-162,163-171 1ykn d1ykne1 E:138-146,155-162,163-171 3pcc d3pccf_ F:138-146,155-162,163-171 3pck d3pckf_ F:138-146,155-162,163-171 3pch d3pchp_ P:472-481,489-496,497-505 1ykm d1ykme1 E:138-146,155-162,163-171 3pcc d3pccb_ B:138-146,155-162,163-171 2pcd d2pcdc_ C:138-146,155-162,163-171 2pcd d2pcde_ E:138-146,155-162,163-171 2bux d2buxa1 A:138-146,155-162,163-171 3pch d3pchr_ R:472-481,489-496,497-505 1ykl d1ykla1 A:138-146,155-162,163-171 1ykk d1ykkc1 C:138-146,155-162,163-171 1ykp d1ykpj1 J:472-481,489-496,497-505 3pcf d3pcfn_ N:472-481,489-496,497-505 3pca d3pcap_ P:472-481,489-496,497-505 3pcn d3pcnf_ F:138-146,155-162,163-171 2pcd d2pcdq_ Q:472-481,489-496,497-505 3pcl d3pclo_ O:472-481,489-496,497-505 3pcf d3pcfo_ O:472-481,489-496,497-505 3pcn d3pcnq_ Q:472-481,489-496,497-505 3pch d3pchn_ N:472-481,489-496,497-505 3pcb d3pcbf_ F:138-146,155-162,163-171 3pck d3pckd_ D:138-146,155-162,163-171 2pcd d2pcdp_ P:472-481,489-496,497-505 3pcj d3pcjf_ F:138-146,155-162,163-171 2pcd d2pcdf_ F:138-146,155-162,163-171 1ykn d1yknh1 H:472-481,489-496,497-505 3pca d3pcao_ O:472-481,489-496,497-505 1ykn d1yknd1 D:472-481,489-496,497-505 3pcc d3pccc_ C:138-146,155-162,163-171 3pce d3pcef_ F:138-146,155-162,163-171 1ykk d1ykkl1 L:472-481,489-496,497-505 3pck d3pckc_ C:138-146,155-162,163-171 3pca d3pcam_ M:472-481,489-496,497-505 3pch d3pcho_ O:472-481,489-496,497-505 3pch d3pchq_ Q:472-481,489-496,497-505 3pcj d3pcjr_ R:472-481,489-496,497-505 3pcg d3pcgr_ R:472-481,489-496,497-505 3pcn d3pcnm_ M:472-481,489-496,497-505 3pcn d3pcnp_ P:472-481,489-496,497-505 3pcf d3pcfr_ R:472-481,489-496,497-505 3pcl d3pclr_ R:472-481,489-496,497-505 3pcm d3pcmo_ O:472-481,489-496,497-505 3pcf d3pcfq_ Q:472-481,489-496,497-505 3pcm d3pcmr_ R:472-481,489-496,497-505 3pck d3pckq_ Q:472-481,489-496,497-505 3pce d3pceo_ O:472-481,489-496,497-505 1ykk d1ykkf1 F:472-481,489-496,497-505 2buv d2buvb1 B:473-481,489-496,497-505 3pcn d3pcnr_ R:472-481,489-496,497-505 3pcn d3pcnn_ N:472-481,489-496,497-505 3pca d3pcan_ N:472-481,489-496,497-505 3pcd d3pcdo_ O:472-481,489-496,497-505 3pcd d3pcdr_ R:472-481,489-496,497-505 2pcd d2pcdr_ R:472-481,489-496,497-505 3pca d3pcar_ R:472-481,489-496,497-505 1ykk d1ykkd1 D:472-481,489-496,497-505 1ykm d1ykmb1 B:472-481,489-496,497-505 1ykl d1yklb1 B:472-479,489-496,497-505 3pcg d3pcgn_ N:472-481,489-496,497-505 3pch d3pchm_ M:472-481,489-496,497-505 3pcb d3pcbn_ N:472-481,489-496,497-505 3pcd d3pcdp_ P:472-481,489-496,497-505 3pce d3pcer_ R:472-481,489-496,497-505 1ykl d1ykld1 D:472-479,489-496,497-505 3pcb d3pcbo_ O:472-481,489-496,497-505 1ykm d1ykmh1 H:472-481,489-496,497-505 3pcn d3pcno_ O:472-481,489-496,497-505 1ykp d1ykph1 H:472-481,489-496,497-505 3pcj d3pcjp_ P:472-481,489-496,497-505 3pcc d3pcco_ O:472-481,489-496,497-505 1ykm d1ykmf1 F:472-481,489-496,497-505 1ykm d1ykmj1 J:472-481,489-496,497-505 3pcf d3pcfm_ M:472-481,489-496,497-505 3pcl d3pcln_ N:472-481,489-496,497-505 3pcb d3pcbp_ P:472-481,489-496,497-505 3pcd d3pcdn_ N:472-481,489-496,497-505 3pcb d3pcbm_ M:472-481,489-496,497-505 1ykm d1ykmd1 D:472-481,489-496,497-505 1ykp d1ykpl1 L:472-481,489-496,497-505 3pcg d3pcgp_ P:472-481,489-496,497-505 3pcl d3pclp_ P:472-481,489-496,497-505 1ykk d1ykkj1 J:472-481,489-496,497-505 3pcl d3pclm_ M:472-479,489-496,497-505 3pci d3pcin_ N:472-481,489-496,497-505 3pcj d3pcjn_ N:472-481,489-496,497-505 3pcj d3pcjq_ Q:472-479,489-496,497-505 3pci d3pcip_ P:472-481,489-496,497-505 3pcc d3pccp_ P:472-481,489-496,497-505 2but d2butb1 B:473-481,489-496,497-505 3pcm d3pcmp_ P:472-479,489-496,497-505 3pce d3pceq_ Q:472-481,489-496,497-505 1ykl d1ykll1 L:472-479,489-496,497-505 2pcd d2pcdn_ N:472-481,489-496,497-505 3pcm d3pcmn_ N:472-481,489-496,497-505 1ykp d1ykpf1 F:472-481,489-496,497-505 1ykp d1ykpd1 D:472-481,489-496,497-505 3pce d3pcem_ M:472-481,489-496,497-505 1ykn d1yknf1 F:472-479,489-496,497-505 3pcb d3pcbr_ R:472-481,489-496,497-505 3pcm d3pcmm_ M:472-479,489-496,497-505 3pck d3pckm_ M:472-481,489-496,497-505 1yko d1ykob1 B:472-481,489-496,497-505 3pcm d3pcmq_ Q:472-479,489-496,497-505 3pci d3pcim_ M:472-481,489-496,497-505 3pca d3pcaq_ Q:472-479,489-496,497-505 1ykm d1ykml1 L:472-481,489-496,497-505 3pce d3pcen_ N:472-481,489-496,497-505 3pce d3pcep_ P:472-481,489-496,497-505 3pcc d3pccn_ N:472-481,489-496,497-505 3pcc d3pccm_ M:472-481,489-496,497-505 3pci d3pcio_ O:472-481,489-496,497-505 2buw d2buwb1 B:473-481,489-496,497-505 3pcl d3pclq_ Q:472-479,489-496,497-505 1yko d1ykoj1 J:472-481,489-496,497-505 3pck d3pckp_ P:472-481,489-496,497-505 1yko d1ykoh1 H:472-481,489-496,497-505 3pck d3pckn_ N:472-481,489-496,497-505 3pcj d3pcjo_ O:472-479,489-496,497-505 1ykk d1ykkb1 B:472-481,489-496,497-505 3pci d3pcir_ R:472-481,489-496,497-505 3pcd d3pcdq_ Q:472-479,489-496,497-505 3pcg d3pcgq_ Q:472-479,489-496,497-505 1ykl d1yklf1 F:472-479,489-496,497-505 1ykn d1yknj1 J:472-479,489-496,497-505 3pck d3pckr_ R:472-481,489-496,497-505 3pcj d3pcjm_ M:472-479,489-496,497-505 1yko d1ykol1 L:472-481,489-496,497-505 3pcg d3pcgm_ M:472-479,489-496,497-505 1ykl d1yklj1 J:472-479,489-496,497-505 1yko d1ykod1 D:472-481,489-496,497-505 2pcd d2pcdm_ M:472-479,489-496,497-505 3pci d3pciq_ Q:472-479,489-496,497-505 1ykn d1yknb1 B:472-479,489-496,497-505 3pcc d3pccq_ Q:472-479,489-496,497-505 3pcb d3pcbq_ Q:472-479,489-496,497-505 3pcd d3pcdm_ M:472-479,489-496,497-505 3pcg d3pcgo_ O:472-479,489-496,497-505 1yko d1ykof1 F:472-481,489-496,497-505 2pcd d2pcdo_ O:472-479,489-496,497-505 3pcc d3pccr_ R:472-479,489-496,497-505 3pck d3pcko_ O:472-479,489-496,497-505 1ykp d1ykpb1 B:472-479,489-496,497-505 1eob d1eoba_ A:138-146,148-155,163-171 1eo2 d1eo2a_ A:138-146,148-155,163-171 1eoa d1eoaa_ A:138-146,148-155,163-171 2buv d2buva1 A:138-146,148-155,163-171 2bum d2buma1 A:138-146,148-155,163-171 1eoc d1eoca_ A:138-146,148-155,163-171 2but d2buta1 A:138-146,148-155,163-171 2buw d2buwa1 A:138-146,148-155,163-171 2bur d2bura1 A:138-146,148-155,163-171 1eo9 d1eo9a_ A:138-146,148-155,163-171 2buu d2buua1 A:138-146,148-155,163-171 2buq d2buqa1 A:138-146,148-155,163-171 2buy d2buya1 A:138-146,148-155,163-171 2bv0 d2bv0a1 A:138-146,148-155,163-171 2bux d2buxa1 A:138-146,148-155,163-171 2buz d2buza1 A:138-146,148-155,163-171 90. d.339.1 ORC1-binding domain ORC1-binding domain complex fold, composed of an alpha hairpin, meander beta-sheet and a five-stranded barrel of unusual topology 1z1a d1z1ab1 B:493-498,514-522,522-533 1z1a d1z1aa1 A:493-498,514-522,522-533 1zhi d1zhib1 B:493-498,514-521,522-533 1zbx d1zbxb1 B:493-498,514-522,522-533 92. d.27.1 Ribosomal protein S16 Ribosomal protein S16 beta(4)-alpha-beta; 2 layers: alpha/beta; mixed beta-sheet, order: 51234 2hhh d2hhhp1 P:32-40,52-63,67-78 1fjg d1fjgp_ P:32-40,52-63,67-78 2uub d2uubp1 P:32-40,52-63,67-78 2uxc d2uxcp1 P:32-40,52-63,67-78 2f4v d2f4vp1 P:32-40,52-63,67-78 1hnw d1hnwp_ P:32-40,52-63,67-78 1xmq d1xmqp_ P:32-40,52-63,67-78 1hnz d1hnzp_ P:32-40,52-63,67-78 2uuc d2uucp1 P:32-40,52-63,67-78 2hgp d2hgps1 S:33-40,52-63,67-78 2uu9 d2uu9p1 P:32-40,52-63,67-78 1n32 d1n32p_ P:32-40,52-63,67-78 2uua d2uuap1 P:32-40,52-63,67-78 1hnx d1hnxp_ P:32-40,52-63,67-78 1xnq d1xnqp_ P:32-40,52-63,67-78 2hgi d2hgis1 S:32-40,52-63,67-78 1i94 d1i94p_ P:32-40,52-63,67-78 2hgr d2hgrs1 S:33-40,52-63,67-78 2gy9 d2gy9p1 P:32-40,53-64,68-78 1n36 d1n36p_ P:32-41,52-63,67-78 1yl4 d1yl4s1 S:32-40,52-63,67-78 2i2u d2i2up1 P:1-9,53-64,68-79 1i95 d1i95p_ P:33-40,52-63,67-78 2i2p d2i2pp1 P:32-40,53-64,68-79 2qbf d2qbfp1 P:32-40,53-64,68-79 2qbd d2qbdp1 P:32-40,53-64,68-79 2qoy d2qoyp1 P:32-40,53-64,68-79 2qb9 d2qb9p1 P:32-40,53-64,68-79 2qp0 d2qp0p1 P:32-40,53-64,68-79 2qbb d2qbbp1 P:32-40,53-64,68-79 2qbh d2qbhp1 P:32-40,53-64,68-79 2qbj d2qbjp1 P:32-40,53-64,68-79 3bn0 d3bn0a1 A:33-43,51-62,67-77 3df3 d3df3p1 P:32-40,53-64,68-79 3df1 d3df1p1 P:32-40,53-64,68-79 2qal d2qalp1 P:32-40,53-64,68-79 2qan d2qanp1 P:32-40,53-64,68-79 2avy d2avyp1 P:32-40,53-64,68-79 1vs5 d1vs5p1 P:32-40,53-64,68-79 2qou d2qoup1 P:33-40,53-64,68-79 2qow d2qowp1 P:33-40,53-64,68-79 2z4k d2z4kp1 P:32-40,53-64,68-79 2z4m d2z4mp1 P:32-40,53-64,68-79 1vs7 d1vs7p1 P:32-40,53-64,68-79 2aw7 d2aw7p1 P:32-40,53-64,68-79 2vhp d2vhpp1 P:32-40,53-64,68-79 2i2u d2i2up1 P:32-40,53-64,68-79 2vho d2vhop1 P:32-40,53-64,68-79 95. c.129.1 MCP/YpsA-like MCP/YpsA-like 3 layers: a/b/a, parallel beta-sheet of 7 strands, order 4321567 1wek d1weke_ E:163-169,169-187,190-198 2q4o d2q4ob1 B:140-146,151-165,168-176 1t35 d1t35e_ E:128-135,137-153,156-164 1t35 d1t35a_ A:128-135,137-153,156-164 1ydh d1ydha_ A:136-142,145-161,164-172 2q4o d2q4oa1 A:140-146,149-165,168-176 2a33 d2a33a1 A:140-146,149-165,168-176 2a33 d2a33b1 B:140-146,149-165,168-176 2q4d d2q4db1 B:136-142,145-161,164-172 1ydh d1ydhb_ B:136-142,145-161,164-172 1t35 d1t35d_ D:128-133,137-153,156-164 1wek d1wekd_ D:132-139,140-158,190-198 1wek d1weka_ A:132-139,140-158,190-198 2q4d d2q4da1 A:137-142,145-161,164-172 1wek d1wekb_ B:132-139,140-158,190-198 96. e.26.1 Prismane protein-like Prismane protein-like 3 domains: (1) spectrin repeat-like 3-helical bundle; (2 and 3) alpha/beta: Rossmann-fold topology 1jqk d1jqkb_ B:473-480,493-501,502-517 1jqk d1jqka_ A:473-480,493-501,502-517 1jqk d1jqkf_ F:473-480,493-501,502-517 1jqk d1jqke_ E:473-480,493-501,502-517 1jqk d1jqkd_ D:473-480,493-501,502-517 1jqk d1jqkc_ C:473-480,493-501,502-517 2z8y d2z8yo1 O:349-356,396-407,470-495 1su7 d1su7a_ A:468-475,488-496,497-512 3b52 d3b52x1 X:468-475,488-496,497-512 3b53 d3b53x1 X:468-475,488-496,497-512 3b51 d3b51x1 X:468-475,488-496,497-512 2z8y d2z8yp1 P:348-355,396-407,470-495 1oao d1oaod_ D:348-356,396-414,470-496 1su8 d1su8a_ A:468-475,488-496,497-512 1mjg d1mjgb_ B:492-499,512-520,521-536 2z8y d2z8yb1 B:492-499,512-520,521-536 2z8y d2z8yc1 C:492-499,512-520,521-534 1mjg d1mjgo_ O:348-356,396-414,470-496 1mjg d1mjga_ A:492-499,512-520,521-536 1mjg d1mjgc_ C:492-499,512-520,521-534 1oao d1oaoc_ C:348-356,396-414,470-496 2z8y d2z8yd1 D:492-499,512-520,521-534 1oao d1oaoa_ A:492-499,512-520,521-536 1mjg d1mjgd_ D:492-499,512-520,521-534 1oao d1oaob_ B:492-499,512-520,521-536 2z8y d2z8ya1 A:492-499,512-520,521-536 2z8y d2z8yn1 N:348-356,396-414,470-496 2z8y d2z8ym1 M:348-356,396-414,470-496 1mjg d1mjgn_ N:348-356,396-414,470-496 1mjg d1mjgp_ P:348-356,396-414,470-496 1mjg d1mjgm_ M:348-356,396-414,470-496 2z8y d2z8yn1 N:666-671,678-690,692-700 2z8y d2z8ym1 M:666-671,678-690,692-700 1oao d1oaoc_ C:666-671,678-690,692-700 2z8y d2z8yp1 P:666-671,678-690,692-700 1oao d1oaod_ D:666-671,678-690,692-700 1mjg d1mjgn_ N:666-671,678-690,692-700 1mjg d1mjgp_ P:666-671,678-690,692-700 1mjg d1mjgm_ M:666-671,678-690,692-700 1mjg d1mjgo_ O:666-671,678-690,692-700 2z8y d2z8yo1 O:666-671,678-690,692-700 1ru3 d1ru3a_ A:350-359,399-410,473-499 97. d.58.39 Glutamyl tRNA-reductase catalytic, N-terminal domain common fold is elaborated with additional secondary structures ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1gpj d1gpja3 A:49-57,77-91,99-117 1gpj d1gpja3 A:40-48,99-117,120-142 101. d.91.1 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 alpha-beta-alpha(2)-beta(3)-alpha; 3 layers a/b/a; antiparallel beta-sheet: 4123 1dt9 d1dt9a3 A:33-41,44-63,64-86 104. a.267.1 Topoisomerase V catalytic domain-like Topoisomerase V catalytic domain-like multihelical; irregular array; contains small amount of beta-structure and a 3-helical bundle with a variant homeofomain-like fold and HTH motif (scop_cf 46688) 2csb d2csba5 A:4-10,99-108,109-119 109. d.174.1 Nitric oxide (NO) synthase oxygenase domain Nitric oxide (NO) synthase oxygenase domain unusual fold 1qom d1qomb_ B:338-342,368-379,403-424 3nod d3nodb_ B:338-342,368-379,403-424 3eah d3eahb1 B:294-298,324-335,359-380 1rs6 d1rs6a_ A:559-563,589-598,624-645 1m00 d1m00a_ A:559-563,589-598,624-645 2fc1 d2fc1a1 A:206-210,236-245,271-292 2hx4 d2hx4a1 A:559-563,589-598,624-645 2hx3 d2hx3a1 A:559-563,589-598,624-645 1nse d1nsea_ A:330-334,360-369,395-416 1d0c d1d0ca_ A:330-334,360-369,395-416 1m9k d1m9ka_ A:328-332,358-367,393-414 1m9r d1m9rb_ B:328-332,358-367,393-414 1d0o d1d0oa_ A:330-334,360-369,395-416 1lzx d1lzxa_ A:559-563,589-598,624-645 1vag d1vaga_ A:559-563,589-598,624-645 1rs7 d1rs7a_ A:559-563,589-598,624-645 3nse d3nsea_ A:330-334,360-369,395-416 9nse d9nsea_ A:330-334,360-369,395-416 3e6t d3e6tb1 B:338-342,368-377,403-424 1p6h d1p6ha_ A:559-563,589-598,624-645 1m9q d1m9qb_ B:328-332,358-367,393-414 2g6m d2g6ma1 A:559-563,589-598,624-645 3e7i d3e7ia1 A:338-342,368-377,403-424 3e7t d3e7tb1 B:338-342,368-377,403-424 2g6n d2g6na1 A:559-563,589-598,624-645 1mmv d1mmva_ A:559-563,589-598,624-645 3e6n d3e6na1 A:338-342,368-377,403-424 2g6h d2g6ha1 A:559-563,589-598,624-645 1rs7 d1rs7b_ B:559-563,589-598,624-645 2fbz d2fbzx1 X:206-210,236-245,271-292 1zzq d1zzqb1 B:559-563,589-598,624-645 1om4 d1om4a_ A:559-563,589-598,624-645 1d1v d1d1va_ A:330-334,360-369,395-416 1k2t d1k2ta_ A:559-563,589-598,624-645 1rs6 d1rs6b_ B:559-563,589-598,624-645 1k2r d1k2ra_ A:559-563,589-598,624-645 2bhj d2bhja1 A:338-342,368-377,403-424 1dmk d1dmka_ A:330-334,360-369,395-416 1zzq d1zzqa1 A:559-563,589-598,624-645 1k2u d1k2ua_ A:559-563,589-598,624-645 1lzz d1lzza_ A:559-563,589-598,624-645 2g6k d2g6ka1 A:559-563,589-598,624-645 1rs8 d1rs8a_ A:330-334,360-369,395-416 1zvl d1zvla1 A:559-563,589-598,624-645 1p6m d1p6ma_ A:330-334,360-369,395-416 1df1 d1df1a_ A:338-342,368-377,403-424 2g6l d2g6la1 A:559-563,589-598,624-645 1rs9 d1rs9a_ A:330-334,360-369,395-416 1foi d1foia_ A:330-334,360-369,395-416 1mmw d1mmwa_ A:559-563,589-598,624-645 3e6o d3e6ob1 B:338-342,368-377,403-424 7nse d7nsea_ A:330-334,360-369,395-416 1m9m d1m9mb_ B:328-332,358-367,393-414 1d0c d1d0cb_ B:330-334,360-369,395-416 2g6n d2g6nb1 B:559-563,589-598,624-645 1m9j d1m9ja_ A:328-332,358-367,393-414 1d0o d1d0ob_ B:330-334,360-369,395-416 1om5 d1om5a_ A:559-563,589-598,624-645 1ed5 d1ed5a_ A:330-334,360-369,395-416 1dm6 d1dm6b_ B:330-334,360-369,395-416 1m7v d1m7va_ A:206-210,236-245,271-292 2g6i d2g6ib1 B:559-563,589-598,624-645 1k2t d1k2tb_ B:559-563,589-598,624-645 3b3m d3b3mb1 B:559-563,589-598,624-645 3e6n d3e6nb1 B:338-342,368-377,403-424 2nse d2nsea_ A:330-334,360-369,395-416 1foo d1fooa_ A:330-334,360-369,395-416 1p6j d1p6ja_ A:559-563,589-598,624-645 1nse d1nseb_ B:330-334,360-369,395-416 1p6k d1p6ka_ A:559-563,589-598,624-645 1nsi d1nsic_ C:344-348,374-383,409-430 1p6k d1p6kb_ B:559-563,589-598,624-645 1d1x d1d1xa_ A:330-334,360-369,395-416 3nos d3nosa_ A:328-332,358-367,393-414 4nse d4nsea_ A:330-334,360-369,395-416 1foj d1fojb_ B:330-334,360-369,395-416 1p6i d1p6ia_ A:559-563,589-598,624-645 1m8e d1m8eb_ B:338-342,368-377,403-424 1mmw d1mmwb_ B:559-563,589-598,624-645 1qw6 d1qw6a_ A:559-563,589-598,624-645 1m7z d1m7za_ A:206-210,236-245,271-292 1qom d1qoma_ A:338-342,368-377,403-424 2g6h d2g6hb1 B:559-563,589-598,624-645 1d1y d1d1ya_ A:330-334,360-369,395-416 1qwc d1qwca_ A:559-563,589-598,624-645 1ed4 d1ed4a_ A:330-334,360-369,395-416 2g6l d2g6lb1 B:559-563,589-598,624-645 1p6h d1p6hb_ B:559-563,589-598,624-645 1d1w d1d1wa_ A:330-334,360-369,395-416 1p6j d1p6jb_ B:559-563,589-598,624-645 2g6i d2g6ia1 A:559-563,589-598,624-645 1p6n d1p6na_ A:330-334,360-369,395-416 2hx4 d2hx4b1 B:559-563,589-598,624-645 1m8e d1m8ea_ A:338-342,368-377,403-424 1mmv d1mmvb_ B:559-563,589-598,624-645 2hx3 d2hx3b1 B:559-563,589-598,624-645 3nos d3nosb_ B:328-332,358-367,393-414 1m9k d1m9kb_ B:328-332,358-367,393-414 1dm8 d1dm8a_ A:330-334,360-369,395-416 3b3m d3b3ma1 A:559-563,589-598,624-645 1i83 d1i83a_ A:330-334,360-369,395-416 1lzx d1lzxb_ B:559-563,589-598,624-645 1m9m d1m9ma_ A:328-332,358-367,393-414 1zzs d1zzsa1 A:330-334,360-369,395-416 1dwx d1dwxb_ B:338-342,368-377,403-424 1d1v d1d1vb_ B:330-334,360-369,395-416 1dmj d1dmja_ A:330-334,360-369,395-416 1om4 d1om4b_ B:559-563,589-598,624-645 1mjt d1mjta_ A:197-201,227-236,262-283 1dm6 d1dm6a_ A:330-334,360-369,395-416 1qw4 d1qw4a_ A:338-342,368-377,403-424 1zvi d1zvia1 A:559-563,589-598,624-645 1om5 d1om5b_ B:559-563,589-598,624-645 1dmk d1dmkb_ B:330-334,360-369,395-416 1ed6 d1ed6b_ B:330-334,360-369,395-416 1k2s d1k2sa_ A:559-563,589-598,624-645 1m9t d1m9tb_ B:338-342,368-377,403-424 1m8h d1m8hb_ B:338-342,368-377,403-424 1df1 d1df1b_ B:338-342,368-377,403-424 1m9t d1m9ta_ A:338-342,368-377,403-424 3e7t d3e7ta1 A:338-342,368-377,403-424 2g6m d2g6mb1 B:559-563,589-598,624-645 3e6t d3e6ta1 A:338-342,368-377,403-424 3ebd d3ebda1 A:338-342,368-377,403-424 1m00 d1m00b_ B:559-563,589-598,624-645 9nse d9nseb_ B:330-334,360-369,395-416 2g6o d2g6oa1 A:330-334,360-369,395-416 1fol d1fola_ A:330-334,360-369,395-416 2hx2 d2hx2a1 A:330-334,360-369,395-416 3ebf d3ebfb1 B:338-342,368-377,403-424 1d1x d1d1xb_ B:330-334,360-369,395-416 1dm7 d1dm7b_ B:330-334,360-369,395-416 1p6m d1p6mb_ B:330-334,360-369,395-416 3e67 d3e67b1 B:338-342,368-377,403-424 1d1y d1d1yb_ B:330-334,360-369,395-416 6nse d6nsea_ A:330-334,360-369,395-416 1dm7 d1dm7a_ A:330-334,360-369,395-416 1q2o d1q2oa_ A:330-334,360-369,395-416 1p6i d1p6ib_ B:559-563,589-598,624-645 5nse d5nsea_ A:330-334,360-369,395-416 1foi d1foib_ B:330-334,360-369,395-416 1qw5 d1qw5b_ B:338-342,368-377,403-424 1d1w d1d1wb_ B:330-334,360-369,395-416 2g6k d2g6kb1 B:559-563,589-598,624-645 1ed4 d1ed4b_ B:330-334,360-369,395-416 1rs8 d1rs8b_ B:330-334,360-369,395-416 3b3n d3b3na1 A:559-563,589-598,624-645 2nod d2noda_ A:338-342,368-377,403-424 1k2r d1k2rb_ B:559-563,589-598,624-645 1mjt d1mjtb_ B:197-201,227-236,262-283 1nod d1nodb_ B:338-342,368-377,403-424 3ebf d3ebfa1 A:338-342,368-377,403-424 1nsi d1nsib_ B:344-348,374-383,409-430 1foj d1foja_ A:330-334,360-369,395-416 2hx2 d2hx2b1 B:330-334,360-369,395-416 1dmi d1dmia_ A:330-334,360-369,395-416 1fop d1fopb_ B:330-334,360-369,395-416 1m9r d1m9ra_ A:328-332,358-367,393-414 2nod d2nodb_ B:338-342,368-377,403-424 1lzz d1lzzb_ B:559-563,589-598,624-645 1n2n d1n2nb_ B:338-342,368-377,403-424 1m8h d1m8ha_ A:338-342,368-377,403-424 1p6n d1p6nb_ B:330-334,360-369,395-416 1dww d1dwwa_ A:338-342,368-377,403-424 4nos d4nosb_ B:344-348,374-383,409-430 7nse d7nseb_ B:330-334,360-369,395-416 1m9q d1m9qa_ A:328-332,358-367,393-414 1fol d1folb_ B:330-334,360-369,395-416 1dmi d1dmib_ B:330-334,360-369,395-416 1dm8 d1dm8b_ B:330-334,360-369,395-416 4nos d4nosc_ C:344-348,374-383,409-430 1n2n d1n2na_ A:338-342,368-377,403-424 1dmj d1dmjb_ B:330-334,360-369,395-416 3b3n d3b3nb1 B:559-563,589-598,624-645 1dwv d1dwva_ A:338-342,368-377,403-424 3e7s d3e7sa1 A:327-331,357-366,392-413 1dww d1dwwb_ B:338-342,368-377,403-424 8nse d8nseb_ B:330-334,360-369,395-416 1fop d1fopa_ A:330-334,360-369,395-416 1p6l d1p6la_ A:330-334,360-369,395-416 3nod d3noda_ A:338-342,368-377,403-424 1foo d1foob_ B:330-334,360-369,395-416 1ed6 d1ed6a_ A:330-334,360-369,395-416 5nse d5nseb_ B:330-334,360-369,395-416 1nsi d1nsia_ A:344-348,374-383,409-430 1m8d d1m8db_ B:338-342,368-377,403-424 1m8d d1m8da_ A:338-342,368-377,403-424 3e6o d3e6oa1 A:338-342,368-377,403-424 2g6o d2g6ob1 B:330-334,360-369,395-416 3e65 d3e65a1 A:338-342,368-377,403-424 1rs9 d1rs9b_ B:330-334,360-369,395-416 1jwk d1jwkb_ B:338-342,368-377,403-424 1nod d1noda_ A:338-342,368-377,403-424 3eah d3eaha1 A:294-298,324-333,359-380 1i83 d1i83b_ B:330-334,360-369,395-416 3ebd d3ebdb1 B:338-342,368-377,403-424 1nsi d1nsid_ D:344-348,374-383,409-430 1qw4 d1qw4b_ B:338-342,368-377,403-424 1zzs d1zzsb1 B:330-334,360-369,395-416 1dwv d1dwvb_ B:338-342,368-377,403-424 1k2u d1k2ub_ B:559-563,589-598,624-645 3eai d3eaib1 B:338-342,368-377,403-424 1jwj d1jwjb_ B:338-342,368-377,403-424 1dwx d1dwxa_ A:338-342,368-377,403-424 1zvl d1zvlb1 B:559-563,589-598,624-645 3e65 d3e65b1 B:338-342,368-377,403-424 1r35 d1r35a_ A:338-342,368-377,403-424 1q2o d1q2ob_ B:330-334,360-369,395-416 1r35 d1r35b_ B:338-342,368-377,403-424 1qw5 d1qw5a_ A:338-342,368-377,403-424 1m9j d1m9jb_ B:328-332,358-367,393-414 3e6l d3e6lb1 B:338-342,368-377,403-424 4nos d4nosd_ D:344-348,374-383,409-430 1m8i d1m8ia_ A:338-342,368-377,403-424 3nse d3nseb_ B:330-334,360-369,395-416 3e67 d3e67a1 A:338-342,368-377,403-424 1p6l d1p6lb_ B:330-334,360-369,395-416 2nsi d2nsib_ B:344-348,374-383,409-430 3e68 d3e68b1 B:338-342,368-377,403-424 1vaf d1vafb_ B:338-342,368-377,403-424 1ed5 d1ed5b_ B:330-334,360-369,395-416 1jwk d1jwka_ A:338-342,368-377,403-424 2nsi d2nsia_ A:344-348,374-383,409-430 2nse d2nseb_ B:330-334,360-369,395-416 6nse d6nseb_ B:330-334,360-369,395-416 1k2s d1k2sb_ B:559-563,589-598,624-645 1jwj d1jwja_ A:338-342,368-377,403-424 2nsi d2nsic_ C:344-348,374-383,409-430 3e7i d3e7ib1 B:338-342,368-377,403-424 2nsi d2nsid_ D:344-348,374-383,409-430 3e7g d3e7gc1 C:344-348,374-383,409-430 1vaf d1vafa_ A:338-342,368-377,403-424 3e7g d3e7ga1 A:344-348,374-383,409-430 3eai d3eaia1 A:338-342,368-377,403-424 1m8i d1m8ib_ B:338-342,368-377,403-424 3e7m d3e7ma1 A:338-342,368-377,403-424 3e68 d3e68a1 A:338-342,368-377,403-424 4nos d4nosa_ A:344-348,374-383,409-430 3e7m d3e7mb1 B:338-342,368-377,403-424 4nse d4nseb_ B:330-334,360-369,395-416 8nse d8nsea_ A:330-334,360-369,395-416 3e6l d3e6la1 A:338-342,368-377,403-424 3e7g d3e7gb1 B:344-348,374-383,409-430 3e7g d3e7gd1 D:344-348,374-383,409-430 114. e.44.1 2-methylcitrate dehydratase PrpD 2-methylcitrate dehydratase PrpD consists of an all-alpha and alpha+beta domains 1szq d1szqb_ B:316-324,347-359,373-384 1szq d1szqa_ A:316-325,347-359,373-384 115. d.207.1 Thymidylate synthase-complementing protein Thy1 Thymidylate synthase-complementing protein Thy1 complex alpha+beta fold; contains antiparallel 5-stranded beta-sheet: order 12354 1o2a d1o2ac_ C:155-163,163-176,180-199 1kq4 d1kq4a_ A:155-163,163-176,180-199 1o25 d1o25a_ A:155-163,163-176,180-199 1o2a d1o2aa_ A:155-163,163-176,180-199 1o24 d1o24a_ A:155-163,163-176,180-199 1o2a d1o2ab_ B:155-163,163-176,180-199 1kq4 d1kq4d_ D:155-163,163-176,180-199 1o24 d1o24d_ D:155-163,163-176,180-199 1kq4 d1kq4c_ C:155-163,163-177,180-199 1o28 d1o28d_ D:155-163,163-176,180-199 1o28 d1o28c_ C:155-163,163-176,180-199 1o27 d1o27c_ C:155-163,163-177,180-199 1o25 d1o25d_ D:155-163,163-177,180-199 1o24 d1o24b_ B:155-163,163-177,180-199 1o25 d1o25c_ C:155-163,163-177,180-199 1o27 d1o27a_ A:155-163,163-176,180-199 1o27 d1o27d_ D:155-163,163-177,180-199 1o27 d1o27b_ B:155-163,163-177,180-199 1kq4 d1kq4b_ B:155-163,163-177,180-199 1o24 d1o24c_ C:155-163,163-177,180-199 1o25 d1o25b_ B:155-163,163-177,180-199 1o28 d1o28b_ B:155-163,163-177,180-199 1o2a d1o2ad_ D:155-163,163-177,180-199 1o28 d1o28a_ A:155-163,163-176,180-199 1o29 d1o29c_ C:155-163,163-177,180-199 1o29 d1o29d_ D:155-163,163-177,180-199 1o29 d1o29b_ B:155-163,163-177,180-199 1o26 d1o26c_ C:155-163,163-177,180-199 1o29 d1o29a_ A:155-163,163-177,180-199 1o26 d1o26d_ D:155-163,163-177,180-199 1o26 d1o26a_ A:155-163,163-177,180-199 1o26 d1o26b_ B:155-163,163-177,180-199 1o2b d1o2bd_ D:155-163,163-177,180-199 1o2b d1o2bc_ C:155-163,163-177,180-199 1o2b d1o2ba_ A:155-163,163-177,180-199 1o2b d1o2bb_ B:155-163,163-177,180-199 117. a.102.1 Six-hairpin glycosidases alpha/alpha toroid multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies 1ug9 d1ug9a1 A:561-566,591-606,608-620 1wu6 d1wu6a1 A:55-60,68-83,84-100 1wu5 d1wu5a1 A:55-60,68-83,84-100 1wu4 d1wu4a1 A:55-60,68-83,84-100 2a8z d2a8za1 A:61-65,76-91,92-108 1ulv d1ulva1 A:561-566,591-606,608-621 1l2a d1l2ad_ D:63-67,85-104,105-122 1l2a d1l2ac_ C:63-67,85-104,105-122 1l1y d1l1yf_ F:63-67,85-104,105-122 2jg0 d2jg0a1 A:379-383,402-412,415-431 1l1y d1l1yb_ B:63-67,85-104,105-122 1l1y d1l1yd_ D:63-67,85-104,105-122 1l2a d1l2af_ F:63-67,85-104,105-122 1l2a d1l2ab_ B:63-67,85-104,105-122 1v7w d1v7wa1 A:546-550,576-587,590-606 1l1y d1l1yc_ C:63-67,85-104,105-122 1l1y d1l1ya_ A:63-67,85-104,105-122 1v7v d1v7va1 A:546-550,576-587,590-606 1l2a d1l2aa_ A:63-67,85-104,105-122 1v7x d1v7xa1 A:546-550,576-587,590-606 1l1y d1l1ye_ E:63-67,85-104,105-122 1l2a d1l2ae_ E:63-67,85-104,105-122 2p0v d2p0va1 A:95-100,107-122,125-147 2p0v d2p0vb1 B:95-100,107-122,125-147 2jf4 d2jf4a1 A:379-383,402-412,415-431 2fuz d2fuza1 A:23-28,41-59,60-81 1ug9 d1ug9a1 A:555-560,591-606,608-620 1vd5 d1vd5a_ A:23-28,41-59,60-81 2d5j d2d5ja1 A:23-28,41-59,60-81 2d5j d2d5jb1 B:23-28,41-59,60-81 2afa d2afae1 E:298-303,317-336,337-356 2afa d2afac1 C:298-303,317-336,337-356 2afa d2afaf1 F:298-303,317-336,337-356 2afa d2afad1 D:298-303,317-336,337-356 1lf6 d1lf6b1 B:569-574,599-614,616-629 1lf6 d1lf6a1 A:569-574,599-614,616-629 1lf9 d1lf9b1 B:569-574,599-614,616-629 2afa d2afaa1 A:298-303,317-336,337-356 1lf9 d1lf9a1 A:569-574,599-614,616-629 2a8z d2a8za1 A:119-125,142-161,167-184 1h14 d1h14a_ A:119-125,142-161,167-184 1xwq d1xwqa1 A:119-125,142-161,167-184 2b4f d2b4fa1 A:119-125,142-161,167-184 1h12 d1h12a_ A:119-125,142-161,167-184 1h13 d1h13a_ A:119-125,142-161,167-184 1xwt d1xwta1 A:119-125,142-161,167-184 1xw2 d1xw2a1 A:119-125,142-161,167-184 2nvp d2nvpa1 A:49-55,62-77,80-102 1ulv d1ulva1 A:555-560,591-606,608-621 1ia6 d1ia6a_ A:291-295,305-325,326-342 1ia7 d1ia7a_ A:291-295,305-325,326-342 1lf9 d1lf9a1 A:489-493,533-543,549-564 1lf9 d1lf9b1 B:489-493,533-543,549-564 1rq5 d1rq5a1 A:609-613,635-661,679-699 1lf6 d1lf6b1 B:489-493,533-543,549-564 1fp3 d1fp3b_ B:284-288,312-331,332-351 1lf6 d1lf6a1 A:489-493,533-543,549-564 1ut9 d1ut9a1 A:609-613,635-661,679-699 2d8l d2d8la1 A:179-183,211-230,233-254 1fp3 d1fp3b_ B:30-34,54-73,77-96 1k72 d1k72a1 A:298-302,312-331,334-354 1g87 d1g87a1 A:298-302,312-331,334-354 1nc5 d1nc5a_ A:179-183,211-230,233-254 1kfg d1kfga1 A:298-302,312-331,334-354 1ga2 d1ga2a1 A:298-302,312-331,334-354 1ga2 d1ga2b1 B:298-302,312-331,334-354 1kfg d1kfgb1 B:298-302,312-331,334-354 1g87 d1g87b1 B:298-302,312-331,334-354 2jg0 d2jg0a1 A:264-268,334-356,357-380 1k72 d1k72b1 B:298-302,312-331,334-354 2jf4 d2jf4a1 A:264-268,334-356,357-380 1l1y d1l1yb_ B:58-62,85-104,105-122 1fbo d1fboa_ A:449-453,494-513,514-533 1g9j d1g9ja_ A:449-453,494-513,514-533 1l1y d1l1yd_ D:58-62,85-104,105-122 1f9d d1f9da_ A:449-453,494-513,514-533 1f9o d1f9oa_ A:449-453,494-513,514-533 1fce d1fcea_ A:449-453,494-513,514-533 1fbw d1fbwa_ A:449-453,494-513,514-533 1l1y d1l1ye_ E:58-62,85-104,105-122 1fae d1faea_ A:449-453,494-513,514-533 1g9g d1g9ga_ A:449-453,494-513,514-533 1kwf d1kwfa_ A:196-200,217-229,230-252 2qno d2qnoa1 A:449-453,494-513,514-533 1l2a d1l2ad_ D:58-62,85-104,105-122 1l2a d1l2af_ F:58-62,85-104,105-122 1l2a d1l2aa_ A:58-62,85-104,105-122 1l2a d1l2ac_ C:58-62,85-104,105-122 1cem d1cema_ A:196-200,217-229,230-252 1wu5 d1wu5a1 A:182-186,200-211,212-235 1ayx d1ayxa_ A:49-53,67-86,88-109 1h54 d1h54a1 A:468-472,495-516,527-541 1wu4 d1wu4a1 A:182-186,200-211,212-235 1is9 d1is9a_ A:164-168,185-197,198-220 1wu6 d1wu6a1 A:182-186,200-211,212-235 1js4 d1js4a1 A:300-304,314-334,335-355 3tf4 d3tf4a1 A:300-304,314-334,335-355 1tf4 d1tf4b1 B:300-304,314-334,335-355 1js4 d1js4b1 B:300-304,314-334,335-355 1tf4 d1tf4a1 A:300-304,314-334,335-355 4tf4 d4tf4a1 A:300-304,314-334,335-355 2a8z d2a8za1 A:49-56,76-91,92-108 1h54 d1h54b1 B:468-473,495-516,527-541 1vd5 d1vd5a_ A:34-38,41-59,60-81 2fuz d2fuza1 A:34-38,41-59,60-81 1h13 d1h13a_ A:49-56,76-91,92-108 1xwq d1xwqa1 A:49-56,76-91,92-108 1xw2 d1xw2a1 A:49-56,76-91,92-108 2b4f d2b4fa1 A:49-56,76-91,92-108 1h14 d1h14a_ A:49-56,76-91,92-108 1h12 d1h12a_ A:49-56,76-91,92-108 1l1y d1l1yf_ F:477-481,520-542,546-565 1xwt d1xwta1 A:49-56,76-91,92-108 1l1y d1l1yc_ C:477-481,520-542,546-565 1l2a d1l2af_ F:477-481,520-542,546-565 1l1y d1l1yd_ D:477-481,520-542,546-565 1l1y d1l1ya_ A:477-481,520-542,546-565 1l2a d1l2ac_ C:477-481,520-542,546-565 1l2a d1l2aa_ A:477-481,520-542,546-565 1l1y d1l1yb_ B:477-481,520-543,546-565 1l2a d1l2ab_ B:477-481,520-543,546-565 1l2a d1l2ad_ D:477-481,520-542,546-565 1kwf d1kwfa_ A:208-213,230-252,276-294 1l1y d1l1ye_ E:477-481,520-543,546-565 1l2a d1l2ae_ E:477-481,520-543,546-565 1cem d1cema_ A:208-213,230-252,276-294 1v7v d1v7va1 A:551-560,576-587,590-606 1v7x d1v7xa1 A:551-560,576-587,590-606 1v7w d1v7wa1 A:551-560,576-587,590-606 1is9 d1is9a_ A:176-181,198-220,244-262 2f6d d2f6da1 A:264-268,288-300,313-332 2fba d2fbaa1 A:264-268,288-300,313-332 2jg0 d2jg0a1 A:256-261,334-356,357-380 2jf4 d2jf4a1 A:256-261,334-356,357-380 121. d.6.1 Prion-like Prion-like beta-alpha-beta-alpha(2); antiparallel beta-ribbon 1fo7 d1fo7a_ A:159-164,171-190,199-218 1fkc d1fkca_ A:159-164,171-190,199-218 1i17 d1i17a_ A:38-42,51-68,78-97 1lg4 d1lg4a_ A:86-91,100-117,125-142 1u5l d1u5la_ A:159-164,172-189,199-218 1xu0 d1xu0a_ A:159-165,173-197,208-226 1xyk d1xyka_ A:159-163,172-195,199-227 1dwy d1dwya_ A:160-164,171-195,199-227 1tpx d1tpxa_ A:162-167,174-198,202-228 1tqb d1tqba_ A:162-167,174-198,202-228 1dwz d1dwza_ A:159-164,171-195,199-227 1u3m d1u3ma_ A:166-171,178-195,212-242 1tqc d1tqca_ A:162-167,174-198,202-228 1uw3 d1uw3a_ A:160-164,171-195,199-227 1qlx d1qlxa_ A:159-164,171-195,199-228 1xu0 d1xu0a_ A:127-134,173-197,208-226 1dx0 d1dx0a_ A:159-164,171-195,199-227 1b10 d1b10a_ A:159-164,171-195,199-227 1e1w d1e1wa_ A:159-164,171-195,199-228 1dx1 d1dx1a_ A:159-164,171-195,199-227 1xyw d1xywa_ A:159-164,171-195,199-227 1y15 d1y15a_ A:160-164,171-195,199-231 1h0l d1h0la_ A:159-164,171-195,199-230 1e1s d1e1sa_ A:159-164,171-195,199-228 1hjm d1hjma_ A:160-164,171-195,199-228 1xyx d1xyxa_ A:159-164,171-195,199-231 1fkc d1fkca_ A:159-164,171-190,217-229 1fo7 d1fo7a_ A:159-164,171-190,217-229 1xyk d1xyka_ A:129-134,172-195,199-227 1hjm d1hjma_ A:128-132,171-195,199-228 1hjn d1hjna_ A:128-134,171-195,199-228 1hjn d1hjna_ A:159-164,171-195,199-228 125. d.148.1 Hect, E3 ligase catalytic domain Hect, E3 ligase catalytic domain consists of two alpha+beta domains; the N-terminal domain is array of helices and beta-hairpins; the C-terminal domain is an a/b sandwich with one left-handed beta-alpha(n)-beta unit; conformational flexibility of domain orientation 1d5f d1d5fa_ A:499-505,508-525,544-561 1c4z d1c4zb_ B:499-505,508-525,544-561 1d5f d1d5fb_ B:499-505,508-525,544-561 1c4z d1c4zc_ C:499-505,508-525,544-561 1nd7 d1nd7a_ A:566-573,575-588,608-626 1d5f d1d5fc_ C:499-505,508-525,544-562 1c4z d1c4za_ A:499-505,508-524,544-561 126. d.29.1 Ribosomal protein L31e Ribosomal protein L31e beta-alpha-beta-(alpha)-beta(2); 2 layers: alpha/beta; mixed beta-sheet, order: 1342 1vq5 d1vq5x1 X:7-14,24-42,51-60 1q81 d1q81y_ Y:7-14,24-42,51-60 1yj9 d1yj9x1 X:7-14,24-42,51-62 1yjn d1yjnx1 X:7-14,24-42,51-62 1yit d1yitx1 X:7-14,24-42,51-62 1yi2 d1yi2x1 X:7-14,24-42,51-62 1vq7 d1vq7x1 X:7-14,24-42,51-62 1vq4 d1vq4x1 X:7-14,24-42,51-62 2otl d2otlx1 X:7-14,24-42,51-62 1vq9 d1vq9x1 X:7-14,24-42,51-62 1q86 d1q86y_ Y:7-14,24-42,51-62 1vqo d1vqox1 X:7-14,24-42,51-62 1k8a d1k8ay_ Y:7-14,24-42,51-62 1k9m d1k9my_ Y:7-14,24-42,51-62 1qvg d1qvgw_ W:7-14,24-42,51-62 1n8r d1n8ry_ Y:7-14,24-42,51-62 1yij d1yijx1 X:7-14,24-42,51-62 1vqk d1vqkx1 X:7-14,24-42,51-62 1kqs d1kqsw_ W:7-14,24-42,51-62 1yjw d1yjwx1 X:7-14,24-42,51-62 1vq6 d1vq6x1 X:7-14,24-42,51-62 1kd1 d1kd1y_ Y:7-14,24-42,51-62 1q82 d1q82y_ Y:7-14,24-42,51-62 1m90 d1m90y_ Y:7-14,24-42,51-62 1k73 d1k73y_ Y:7-14,24-42,51-62 1s72 d1s72x_ X:7-14,24-42,51-62 1jj2 d1jj2w_ W:7-14,24-42,51-62 1kc8 d1kc8y_ Y:7-14,24-42,51-62 1yhq d1yhqx1 X:7-14,24-42,51-62 1vqn d1vqnx1 X:7-14,24-42,51-62 1qvf d1qvfw_ W:7-14,24-42,51-62 1nji d1njiy_ Y:7-14,24-42,51-62 1vqp d1vqpx1 X:7-14,24-42,51-62 1m1k d1m1ky_ Y:7-14,24-42,51-62 1vql d1vqlx1 X:7-14,24-42,51-62 1vqm d1vqmx1 X:7-14,24-42,51-62 2otj d2otjx1 X:7-14,24-42,51-62 1vq8 d1vq8x1 X:7-14,24-42,51-62 1q7y d1q7yy_ Y:7-14,24-42,51-62 1ffk d1ffku_ U:4-12,24-42,51-62 127. c.109.1 PEP carboxykinase N-terminal domain PEP carboxykinase N-terminal domain contains mixed beta-sheets; topology is partly similar to that of the catalytic C-terminal domain 2py7 d2py7x2 X:22-26,28-38,141-153 2pxz d2pxzx2 X:22-26,28-38,141-153 1os1 d1os1a2 A:21-26,28-38,141-153 1ii2 d1ii2a2 A:3-8,10-23,114-126 1ii2 d1ii2b2 B:3-8,10-23,114-126 2pc9 d2pc9a2 A:13-18,20-32,122-134 1j3b d1j3bb2 B:13-18,20-32,122-134 1j3b d1j3ba2 A:13-18,20-32,122-134 1xkv d1xkvb2 B:13-18,20-32,122-134 2pc9 d2pc9c2 C:13-18,20-32,122-134 2pc9 d2pc9b2 B:13-18,20-32,122-134 1xkv d1xkva2 A:13-18,20-32,122-134 2pc9 d2pc9d2 D:13-18,20-32,122-134 1nhx d1nhxa2 A:41-46,49-64,163-175 1m51 d1m51a2 A:41-46,49-64,163-175 1khg d1khga2 A:41-46,49-64,163-175 1khb d1khba2 A:41-46,49-64,163-175 1khe d1khea2 A:41-46,49-64,163-175 1khf d1khfa2 A:41-46,49-64,163-175 2gmv d2gmva2 A:41-46,49-64,163-175 2gmv d2gmvb2 B:41-46,49-64,163-175 1k3d d1k3da2 A:18-26,28-38,141-153 1oen d1oena2 A:18-26,28-38,141-153 2olq d2olqa2 A:18-26,28-38,141-153 1aq2 d1aq2a2 A:18-26,28-38,141-153 1ayl d1ayla2 A:18-26,28-38,141-153 2olr d2olra2 A:18-26,28-38,141-153 1k3c d1k3ca2 A:18-26,28-38,141-153 133. d.299.1 Ns1 effector domain-like Ns1 effector domain-like beta-X-beta(5)-alpha-beta-alpha; 2 layers: a/b; bifurcated beta-sheet; order 23654[1,7] 2gx9 d2gx9b1 B:124-138,170-189,195-207 2gx9 d2gx9a1 A:124-138,170-189,195-203 135. d.258.1 Chorismate synthase, AroC Chorismate synthase, AroC duplication: consists of two DCoH-like beta(2)-alpha-beta(2)-alpha structural repeats; 3 layers, beta/alpha/beta 1r52 d1r52c_ C:2-6,237-250,341-369 1r52 d1r52d_ D:2-6,237-250,341-369 1r52 d1r52b_ B:2-6,237-250,341-369 1r52 d1r52a_ A:2-6,237-250,341-369 1um0 d1um0a_ A:2-6,228-241,326-355 1um0 d1um0d_ D:2-6,228-241,326-355 1r53 d1r53a_ A:2-6,237-250,341-371 1um0 d1um0b_ B:2-6,228-241,326-355 1um0 d1um0c_ C:2-6,228-241,326-355 1umf d1umfd_ D:2-6,228-241,326-355 1umf d1umfa_ A:2-6,228-241,326-355 1umf d1umfc_ C:2-6,228-241,326-355 1umf d1umfb_ B:2-6,228-241,326-355 1sq1 d1sq1a_ A:2-6,225-238,323-352 136. e.58.1 Viral ssDNA binding protein Viral ssDNA binding protein 2 domains; d1: [large alpha+beta domain subdivided into the 'head', 'neck' and 'shoulders' regions; in the 'neck', there is an OB-fold interrupted by large insertions]; d2: [all-alpha, 6 helices; orthogonal array] 1urj d1urja_ A:154-163,163-172,233-246 1urj d1urjb_ B:154-163,163-172,233-246 140. d.143.1 SAICAR synthase-like shares functional and structural similarities with the ATP-grasp fold and protein kinase superfamilies ! SAICAR synthase-like consists of two alpha+beta subdomains 1w2f d1w2fa_ A:258-267,351-364,366-387 1w2f d1w2fb_ B:258-267,351-364,366-387 2cnq d2cnqa1 A:116-123,175-184,184-210 1obg d1obga_ A:116-123,175-184,184-210 1obd d1obda_ A:117-123,175-184,184-210 2cnu d2cnua1 A:117-123,175-184,184-210 2cnv d2cnva1 A:117-123,175-184,184-210 1a48 d1a48a_ A:117-123,175-184,184-210 1tzd d1tzdb_ B:255-264,349-362,364-386 1kut d1kuta_ A:81-88,126-134,137-163 144. a.102.5 Family 10 polysaccharide lyase alpha/alpha toroid multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies 1r76 d1r76a_ A:287-291,315-329,333-351 1gxm d1gxmb_ B:499-503,532-547,549-565 1gxm d1gxma_ A:499-503,532-547,549-565 1gxo d1gxoa_ A:499-503,532-547,549-565 1gxn d1gxna_ A:499-503,532-547,549-565 1r76 d1r76a_ A:282-286,315-329,333-351 148. b.153.1 PheT/TilS domain contains putative tRNA-binding structural motif ! PheT/TilS domain core: 3 layers; contains beta-sandwich of unusual topology 2aly d2alyb4 B:329-339,339-351,354-363 2amc d2amcb4 B:329-339,339-351,354-363 2akw d2akwb4 B:329-339,339-351,354-363 2iy5 d2iy5b4 B:329-339,339-351,354-363 1b70 d1b70b6 B:329-339,339-351,354-363 1eiy d1eiyb6 B:329-339,339-351,354-363 149. g.90.1 E6 C-terminal domain-like E6 C-terminal domain-like alpha+beta zinc-binding fold with topological similarity to the fold of lambda cro protein 2fk4 d2fk4a1 A:3-7,8-16,34-44 151. c.1.14 RuBisCo, C-terminal domain TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 1tel d1telb1 B:2129-2137,2288-2298,2303-2315 1rba d1rbaa1 A:117-128,288-296,304-316 1rld d1rldb1 B:129-141,297-305,310-322 1rld d1rlda1 A:129-141,297-305,310-322 2d69 d2d69a1 A:114-126,279-289,294-306 2cwx d2cwxe1 E:114-126,279-289,294-306 1rcx d1rcxh1 H:129-141,297-305,310-322 1rcx d1rcxe1 E:129-141,297-305,310-322 1rcx d1rcxk1 K:129-141,297-305,310-322 1rcx d1rcxl1 L:129-141,297-305,310-322 1rcx d1rcxv1 V:129-141,297-305,310-322 1rcx d1rcxr1 R:129-141,297-305,310-322 1rcx d1rcxb1 B:129-141,297-305,310-322 1rcx d1rcxo1 O:129-141,297-305,310-322 2d69 d2d69b1 B:114-126,279-289,294-306 2d69 d2d69e1 E:114-126,279-289,294-306 2d69 d2d69d1 D:114-126,279-289,294-306 2cwx d2cwxa1 A:114-126,279-289,294-306 8ruc d8ruce1 E:129-141,297-305,310-322 1tel d1tela1 A:1126-1137,1288-1298,1303-1315 2cxe d2cxed1 D:114-126,279-289,294-306 2cxe d2cxea1 A:114-126,279-289,294-306 2cxe d2cxeb1 B:114-126,279-289,294-306 2cxe d2cxec1 C:114-126,279-289,294-306 1ykw d1ykwa1 A:126-137,288-298,303-315 1ykw d1ykwb1 B:126-137,288-298,303-315 1rus d1rusb1 B:117-128,288-296,304-316 1iwa d1iwae1 E:129-141,297-305,310-322 4rub d4rubb1 B:129-140,295-305,310-322 1iwa d1iwag1 G:129-141,297-305,310-322 1rba d1rbab1 B:117-128,288-297,304-316 1iwa d1iwai1 I:129-141,297-305,310-322 4rub d4rubc1 C:129-140,295-305,310-322 1iwa d1iwak1 K:129-141,297-305,310-322 4rub d4ruba1 A:129-140,295-305,310-322 1iwa d1iwam1 M:129-141,297-305,310-322 3rub d3rubl1 L:129-140,297-305,310-322 1rlc d1rlcl1 L:129-140,297-305,310-322 1bwv d1bwva1 A:129-141,297-305,310-322 1bwv d1bwve1 E:129-141,297-305,310-322 1bwv d1bwvc1 C:129-141,297-305,310-322 1bwv d1bwvg1 G:129-141,297-305,310-322 1iwa d1iwaa1 A:129-141,297-305,310-322 4rub d4rubd1 D:129-140,295-305,310-322 2rus d2rusb1 B:117-128,288-296,304-316 1iwa d1iwac1 C:129-141,297-305,310-322 1svd d1svda1 A:122-133,290-298,303-315 9rub d9ruba1 A:117-128,290-297,304-316 1rxo d1rxoh1 H:129-140,297-305,310-322 1rxo d1rxoe1 E:129-140,297-305,310-322 1rxo d1rxol1 L:129-140,297-305,310-322 1rxo d1rxob1 B:129-140,297-305,310-322 1gk8 d1gk8a1 A:129-140,297-305,310-322 1ej7 d1ej7l1 L:129-140,297-305,310-322 1gk8 d1gk8g1 G:129-140,297-305,310-322 1gk8 d1gk8e1 E:129-140,297-305,310-322 1uzh d1uzhb1 B:129-140,297-305,310-322 1ir2 d1ir2u1 U:129-140,297-305,310-322 2v69 d2v69g1 G:129-140,297-305,310-322 2v69 d2v69b1 B:129-140,297-305,310-322 1gk8 d1gk8c1 C:129-140,297-305,310-322 1geh d1gehe1 E:117-128,282-292,297-309 1uzh d1uzhh1 H:129-140,297-305,310-322 2v69 d2v69c1 C:129-140,297-305,310-322 1geh d1gehd1 D:117-128,282-292,297-309 1ir2 d1ir2t1 T:129-140,297-305,310-322 1uzh d1uzha1 A:129-140,297-305,310-322 1uzh d1uzhv1 V:129-140,297-305,310-322 1uzh d1uzhe1 E:129-140,297-305,310-322 1uzh d1uzhr1 R:129-140,297-305,310-322 1ir2 d1ir2g1 G:129-140,297-305,310-322 1geh d1geha1 A:117-128,282-292,297-309 1geh d1gehc1 C:117-128,282-292,297-309 1aa1 d1aa1b1 B:129-140,297-305,310-322 1aa1 d1aa1e1 E:129-140,297-305,310-322 2v69 d2v69a1 A:129-140,297-305,310-322 1ir2 d1ir2x1 X:129-140,297-305,310-322 1aa1 d1aa1h1 H:129-140,297-305,310-322 1geh d1gehb1 B:117-128,282-292,297-309 1aa1 d1aa1l1 L:129-140,297-305,310-322 1uw9 d1uw9h1 H:129-140,297-305,310-322 1ir2 d1ir2h1 H:129-140,297-305,310-322 1uzh d1uzhk1 K:129-140,297-305,310-322 1uw9 d1uw9k1 K:129-140,297-305,310-322 1ir2 d1ir2e1 E:129-140,297-305,310-322 1uzh d1uzho1 O:129-140,297-305,310-322 1ir2 d1ir2w1 W:129-140,297-305,310-322 1uw9 d1uw9e1 E:129-140,297-305,310-322 1ir2 d1ir2b1 B:129-140,297-305,310-322 1uw9 d1uw9v1 V:129-140,297-305,310-322 1uw9 d1uw9o1 O:129-140,297-305,310-322 1uw9 d1uw9a1 A:129-140,297-305,310-322 1ir2 d1ir2d1 D:129-140,297-305,310-322 1ir2 d1ir2c1 C:129-140,297-305,310-322 2v69 d2v69f1 F:129-140,297-305,310-322 1ir2 d1ir2y1 Y:129-140,297-305,310-322 1uw9 d1uw9r1 R:129-140,297-305,310-322 1ir2 d1ir2a1 A:129-140,297-305,310-322 1ir2 d1ir2v1 V:129-140,297-305,310-322 1ir2 d1ir2f1 F:129-140,297-305,310-322 2v69 d2v69h1 H:129-140,297-305,310-322 1uw9 d1uw9b1 B:129-140,297-305,310-322 1uwa d1uwav1 V:129-140,297-305,310-322 2v6a d2v6ag1 G:129-140,297-305,310-322 1uwa d1uwak1 K:129-140,297-305,310-322 1aus d1ausn1 N:129-140,297-305,310-322 1aus d1ausm1 M:129-140,297-305,310-322 1aus d1ausl1 L:129-140,297-305,310-322 1aus d1auso1 O:129-140,297-305,310-322 2v6a d2v6ab1 B:129-140,297-305,310-322 2v69 d2v69e1 E:129-140,297-305,310-322 1ir2 d1ir2z1 Z:129-140,297-305,310-322 2v63 d2v63c1 C:129-140,297-305,310-322 2v69 d2v69d1 D:129-140,297-305,310-322 1uzd d1uzdk1 K:129-140,297-305,310-322 1uwa d1uwaa1 A:129-140,297-305,310-322 1ir2 d1ir2s1 S:129-140,297-305,310-322 2v67 d2v67c1 C:129-140,297-305,310-322 1uzd d1uzdv1 V:129-140,297-305,310-322 2v67 d2v67e1 E:129-140,297-305,310-322 2v67 d2v67b1 B:129-140,297-305,310-322 2v6a d2v6ac1 C:129-140,297-305,310-322 2v67 d2v67g1 G:129-140,297-305,310-322 1uwa d1uwao1 O:129-140,297-305,310-322 1uwa d1uwah1 H:129-140,297-305,310-322 2v6a d2v6ah1 H:129-140,297-305,310-322 2v63 d2v63e1 E:129-140,297-305,310-322 1uwa d1uwab1 B:129-140,297-305,310-322 1uwa d1uwae1 E:129-140,297-305,310-322 2v67 d2v67f1 F:129-140,297-305,310-322 2v67 d2v67a1 A:129-140,297-305,310-322 1uzd d1uzdo1 O:129-140,297-305,310-322 2v63 d2v63h1 H:129-140,297-305,310-322 1uzd d1uzde1 E:129-140,297-305,310-322 2v6a d2v6ad1 D:129-140,297-305,310-322 2v67 d2v67h1 H:129-140,297-305,310-322 1uzd d1uzdr1 R:129-140,297-305,310-322 2v6a d2v6ae1 E:129-140,297-305,310-322 2v63 d2v63g1 G:129-140,297-305,310-322 2v63 d2v63a1 A:129-140,297-305,310-322 1uzd d1uzda1 A:129-140,297-305,310-322 2v63 d2v63f1 F:129-140,297-305,310-322 2v6a d2v6af1 F:129-140,297-305,310-322 2v68 d2v68a1 A:129-140,297-305,310-322 2v6a d2v6aa1 A:129-140,297-305,310-322 2v63 d2v63b1 B:129-140,297-305,310-322 2v68 d2v68b1 B:129-140,297-305,310-322 1uwa d1uwar1 R:129-140,297-305,310-322 2v68 d2v68c1 C:129-140,297-305,310-322 2v67 d2v67d1 D:129-140,297-305,310-322 2v63 d2v63d1 D:129-140,297-305,310-322 1wdd d1wdde1 E:129-140,297-305,310-322 2v68 d2v68e1 E:129-140,297-305,310-322 2v68 d2v68g1 G:129-140,297-305,310-322 2v68 d2v68h1 H:129-140,297-305,310-322 1uzd d1uzdh1 H:129-140,297-305,310-322 1uzd d1uzdb1 B:129-140,297-305,310-322 2v68 d2v68d1 D:129-140,297-305,310-322 1wdd d1wdda1 A:129-140,297-305,310-322 1rsc d1rsce1 E:129-140,297-305,310-322 1rsc d1rscb1 B:129-140,297-305,310-322 1rsc d1rsca1 A:129-140,297-305,310-322 1rsc d1rscd1 D:129-140,297-305,310-322 1rsc d1rscc1 C:129-140,297-305,310-322 1rsc d1rscf1 F:129-140,297-305,310-322 1rsc d1rsch1 H:129-140,297-305,310-322 1rbl d1rblb1 B:129-140,297-305,310-322 1rbl d1rblg1 G:129-140,297-305,310-322 1rbl d1rble1 E:129-140,297-305,310-322 1rbl d1rblc1 C:129-140,297-305,310-322 1rbl d1rblh1 H:129-140,297-305,310-322 1rbl d1rblf1 F:129-140,297-305,310-322 1rbl d1rbla1 A:129-140,297-305,310-322 1rbl d1rbld1 D:129-140,297-305,310-322 2v68 d2v68f1 F:129-140,297-305,310-322 1rsc d1rscg1 G:129-140,297-305,310-322 8ruc d8rucg1 G:129-140,297-305,310-322 1ir1 d1ir1a1 A:129-140,297-305,310-322 1rbo d1rboh1 H:129-140,297-305,310-322 1rbo d1rbob1 B:129-140,297-305,310-322 1rbo d1rbol1 L:129-140,297-305,310-322 1rbo d1rboe1 E:129-140,297-305,310-322 8ruc d8ruca1 A:129-140,297-305,310-322 1bxn d1bxng1 G:132-143,299-307,312-324 8ruc d8rucc1 C:129-140,297-305,310-322 1ir1 d1ir1d1 D:129-140,297-305,310-322 1bxn d1bxne1 E:132-143,299-307,312-324 1bxn d1bxnc1 C:132-143,299-307,312-324 1bxn d1bxna1 A:132-143,299-307,312-324 1ir1 d1ir1c1 C:129-140,297-305,310-322 1ir1 d1ir1b1 B:129-140,297-305,310-322 1rco d1rcov1 V:129-140,297-305,310-322 1rco d1rcoe1 E:129-140,297-305,310-322 1rco d1rcok1 K:129-140,297-305,310-322 1rco d1rcoo1 O:129-140,297-305,310-322 1rco d1rcoh1 H:129-140,297-305,310-322 1rco d1rcol1 L:129-140,297-305,310-322 1rco d1rcob1 B:129-140,297-305,310-322 1rco d1rcor1 R:129-140,297-305,310-322 1iwa d1iwao1 O:129-140,297-305,310-322 152. c.13.1 CRAL/TRIO domain SpoIIaa-like core: 4 turns of a (beta-alpha)n superhelix 1olm d1olme3 E:187-193,195-206,387-397 1oip d1oipa2 A:152-160,172-188,215-223 1r5l d1r5la2 A:152-160,172-188,215-223 1o6u d1o6ue3 E:185-193,195-206,387-396 1olm d1olma3 A:185-193,195-206,387-397 1olm d1olme3 E:187-193,195-206,210-218 1o6u d1o6ua3 A:185-193,195-206,387-397 156. d.211.2 Plakin repeat repeats associate forming globular subdomains ! beta-hairpin-alpha-hairpin repeat multiple repeats of beta(2)-alpha(2) motif 1lm7 d1lm7b_ B:2306-2311,2311-2319,2322-2338 1lm7 d1lm7a_ A:2306-2311,2311-2319,2322-2338 1lm5 d1lm5a_ A:2627-2632,2632-2640,2643-2658 1lm5 d1lm5b_ B:2627-2632,2632-2640,2643-2658 157. d.192.1 YlxR-like YlxR-like alpha+beta fold; could have evolved from a glucocorticoid receptor-like zinc finger domain 1g2r d1g2ra_ A:44-51,52-63,74-95 168. d.165.1 Ribosome inactivating proteins (RIP) Ribosome inactivating proteins (RIP) contains mixed beta-sheet 1rzo d1rzoc_ C:1134-1139,1139-1156,1159-1181 2p8n d2p8na1 A:135-140,140-157,160-182 2pjo d2pjoa1 A:135-140,140-157,160-182 1ift d1ifta_ A:135-140,140-157,160-182 1dm0 d1dm0l_ L:1-7,9-26,171-182 1r4p d1r4pa_ A:1-7,9-25,171-183 2ga4 d2ga4a1 A:1-7,9-25,171-183 1dm0 d1dm0a_ A:1-7,9-26,171-183 1r4q d1r4ql_ L:1-7,9-25,171-185 1hwn d1hwna_ A:85-91,115-124,150-162 1r4q d1r4qa_ A:1-7,9-25,171-185 1hwn d1hwna_ A:85-91,133-148,150-162 1cf5 d1cf5a_ A:78-84,108-117,141-163 1cf5 d1cf5b_ B:78-84,108-117,141-163 1m2t d1m2ta_ A:84-90,114-123,148-170 1onk d1onka_ A:84-90,114-123,148-170 1j1m d1j1ma_ A:88-94,122-131,160-182 1puu d1puua_ A:84-91,114-123,148-170 1rzo d1rzoa_ A:1088-1094,1122-1131,1159-1181 2r9k d2r9ka1 A:84-91,114-123,148-170 1sz6 d1sz6a_ A:84-91,114-123,148-170 1uq5 d1uq5a_ A:88-94,122-131,160-182 1uq4 d1uq4a_ A:88-94,122-131,160-182 2r3d d2r3da1 A:88-94,122-131,160-182 1hwo d1hwoa_ A:85-91,115-124,150-167 1rzo d1rzoc_ C:1088-1094,1122-1131,1159-1181 2p8n d2p8na1 A:88-94,122-131,160-182 2p8n d2p8na1 A:135-140,140-157,181-195 1rtc d1rtca_ A:88-94,122-131,160-182 1pum d1puma_ A:84-91,114-123,148-170 1il9 d1il9a_ A:88-94,122-131,160-182 2r2x d2r2xa1 A:88-94,122-131,160-182 1il5 d1il5b_ B:88-94,122-131,160-182 2pjo d2pjoa1 A:135-140,140-157,181-195 1abr d1abra_ A:82-88,112-121,147-169 1rzo d1rzoc_ C:1134-1139,1139-1156,1180-1194 1il4 d1il4a_ A:88-94,122-131,160-182 1ift d1ifta_ A:135-140,140-157,181-195 2pjo d2pjoa1 A:88-94,122-131,160-182 1il5 d1il5a_ A:88-94,122-131,160-182 1ift d1ifta_ A:88-94,122-131,160-182 1br5 d1br5a_ A:88-94,122-131,160-182 1obt d1obta_ A:88-94,122-131,160-182 1ifu d1ifua_ A:88-94,122-131,160-182 1il3 d1il3a_ A:88-94,122-131,160-182 2aai d2aaia_ A:88-94,122-131,160-182 1br6 d1br6a_ A:88-94,122-131,160-182 1ifs d1ifsa_ A:88-94,122-131,160-182 1mrg d1mrga_ A:78-84,110-119,143-165 1obs d1obsa_ A:88-94,122-131,160-182 2q3n d2q3na1 A:81-87,111-120,146-168 1f8q d1f8qa_ A:78-84,110-119,143-165 1mom d1moma_ A:78-84,110-119,143-165 1hwp d1hwpa_ A:85-91,115-124,150-168 2jdl d2jdlb1 B:78-85,110-119,143-165 1j4g d1j4gd_ D:78-85,110-119,143-165 1bry d1bryy_ Y:78-85,110-119,143-165 1nli d1nlia_ A:78-85,110-119,143-165 1bry d1bryz_ Z:78-85,110-119,143-165 1j4g d1j4gb_ B:78-85,110-119,143-165 1hwo d1hwoa_ A:85-91,133-148,150-167 1ahb d1ahba_ A:78-85,110-119,143-165 1mrk d1mrka_ A:78-85,110-119,143-165 1mrj d1mrja_ A:78-85,110-119,143-165 1ahc d1ahca_ A:78-85,110-119,143-165 1mri d1mria_ A:78-85,110-119,143-165 1giu d1giua_ A:78-85,110-119,143-165 1tcs d1tcsa_ A:78-85,110-119,143-165 1j4g d1j4gc_ C:78-85,110-119,143-165 1hwm d1hwma_ A:85-91,115-124,149-168 1hwp d1hwpa_ A:85-91,133-148,150-168 1r4q d1r4ql_ L:86-94,113-122,151-172 3ctk d3ctka1 A:80-89,113-122,148-170 1r4q d1r4qa_ A:86-94,113-122,151-172 1apa d1apaa_ A:87-96,127-136,163-185 1qcg d1qcgb_ B:83-92,122-131,159-181 1r4q d1r4ql_ L:86-94,131-146,151-172 1qcg d1qcga_ A:83-92,122-131,159-181 172. a.118.25 TROVE domain-like consist of two superhelical sections arranged like a horse-shoe ! alpha-alpha superhelix multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix 1yvr d1yvra1 A:21-27,28-40,49-68 1yvp d1yvpa1 A:21-27,28-40,49-68 1yvp d1yvpb1 B:21-27,28-40,49-68 2i91 d2i91b1 B:21-27,28-40,49-68 2i91 d2i91a1 A:21-27,28-40,49-68 174. d.18.1 ssDNA-binding transcriptional regulator domain ssDNA-binding transcriptional regulator domain helix-swapped dimer of beta(4)-alpha motifs 2gia d2giab1 B:44-53,89-102,147-167 2gid d2gidb1 B:44-53,89-102,147-167 2gje d2gjed1 D:44-53,89-102,147-167 2gia d2giad1 D:44-53,89-102,147-167 2gid d2gidp1 P:88-97,127-140,198-218 2gid d2gidj1 J:44-53,89-102,147-167 2gid d2gidg1 G:88-97,127-140,198-218 2nvn d2nvna1 A:10-17,36-58,104-119 2gid d2gidd1 D:43-53,89-102,146-167 2gia d2giaa1 A:88-97,127-140,198-218 2gia d2giag1 G:88-97,127-140,198-218 2gid d2gidk1 K:44-53,89-102,147-167 2gid d2gidh1 H:88-97,127-140,198-218 2gid d2gida1 A:87-97,127-140,198-218 1l3a d1l3ac_ C:102-118,154-164,223-243 1l3a d1l3aa_ A:102-118,154-164,223-243 1l3a d1l3ab_ B:102-118,154-164,223-243 1l3a d1l3ad_ D:102-118,154-164,223-243 2gid d2gidh1 H:117-128,127-140,198-218 2gia d2giaa1 A:117-128,127-140,198-218 2gia d2giag1 G:117-128,127-140,198-218 2gid d2gidp1 P:117-128,127-140,198-218 2gid d2gida1 A:117-128,127-140,198-218 2gid d2gidg1 G:117-128,127-140,198-218 177. d.210.1 Argininosuccinate synthetase, C-terminal domain Argininosuccinate synthetase, C-terminal domain unusual fold 1kh3 d1kh3a2 A:213-222,234-250,273-290 1j1z d1j1zd2 D:213-222,234-250,273-290 1kh3 d1kh3d2 D:213-222,234-250,273-290 1kh1 d1kh1c2 C:213-222,234-250,273-290 1kh1 d1kh1a2 A:213-222,234-250,273-290 1j21 d1j21d2 D:213-222,234-250,273-290 1kh2 d1kh2d2 D:213-222,234-250,273-290 1kh3 d1kh3b2 B:213-222,234-250,273-290 1kor d1kord2 D:213-222,234-250,273-290 1kh2 d1kh2c2 C:213-222,234-250,273-290 1kh2 d1kh2b2 B:213-222,234-250,273-290 1j1z d1j1zb2 B:213-222,234-250,273-290 1j1z d1j1za2 A:213-222,234-250,273-290 1kor d1kora2 A:213-222,234-250,273-290 1j21 d1j21a2 A:213-222,234-250,273-290 1j20 d1j20d2 D:213-222,234-250,273-290 1kor d1korb2 B:213-222,234-250,273-290 1kh2 d1kh2a2 A:213-222,234-250,273-290 1kh1 d1kh1d2 D:213-222,234-250,273-290 1j21 d1j21b2 B:213-222,234-250,273-290 1j20 d1j20b2 B:213-222,234-250,273-290 1j21 d1j21c2 C:213-222,234-250,273-290 1j20 d1j20a2 A:213-222,234-250,273-290 1kh1 d1kh1b2 B:213-222,234-250,273-290 1j1z d1j1zc2 C:213-222,234-250,273-290 1j20 d1j20c2 C:213-222,234-250,273-290 1kh3 d1kh3c2 C:213-222,234-250,273-290 1kor d1korc2 C:213-222,234-250,273-290 1vl2 d1vl2b2 B:218-227,244-260,283-300 1vl2 d1vl2a2 A:218-227,244-260,283-300 1vl2 d1vl2d2 D:218-227,244-260,283-300 1vl2 d1vl2c2 C:218-227,244-260,283-300 1kp2 d1kp2a2 A:233-242,255-271,294-311 1kp3 d1kp3a2 A:233-242,255-271,294-311 1k97 d1k97a2 A:233-242,255-271,294-311 1k92 d1k92a2 A:233-242,255-271,294-311 184. e.17.1 D-aminoacid aminotransferase-like PLP-dependent enzymes D-aminoacid aminotransferase-like PLP-dependent enzymes 2 domains: (1) alpha+beta: beta3-alpha2-beta2; (2) alpha/beta, a part of its mixed sheet forms barrel: n=6, S=8 1i2k d1i2ka_ A:23-34,38-54,59-75 1i2l d1i2la_ A:23-33,38-54,59-75 1et0 d1et0a_ A:33-43,52-68,74-90 4daa d4daaa_ A:28-38,43-59,65-81 3daa d3daab_ B:28-38,43-59,65-81 3daa d3daaa_ A:28-38,43-59,65-81 4daa d4daab_ B:28-38,43-59,65-81 1g2w d1g2wb_ B:28-38,43-59,65-81 5daa d5daaa_ A:28-38,43-59,65-81 1iyd d1iydb_ B:33-43,52-68,74-90 1a0g d1a0ga_ A:28-38,43-59,65-81 1a0g d1a0gb_ B:28-38,43-59,65-81 1daa d1daaa_ A:28-38,43-59,65-81 1iyd d1iydc_ C:33-43,52-68,74-90 1daa d1daab_ B:28-38,43-59,65-81 2dab d2daba_ A:28-38,43-59,65-81 1g2w d1g2wa_ A:28-38,43-59,65-81 2daa d2daab_ B:28-38,43-59,65-81 1iyd d1iyda_ A:33-43,52-68,74-90 1iye d1iyea_ A:33-43,52-68,74-90 1iye d1iyec_ C:33-43,52-68,74-90 2dab d2dabb_ B:28-38,43-59,65-81 2daa d2daaa_ A:28-38,43-59,65-81 5daa d5daab_ B:28-38,43-59,65-81 1i1l d1i1la_ A:33-43,52-68,74-90 1i1l d1i1lc_ C:1033-1043,1052-1068,1074-1090 1i1l d1i1lb_ B:533-543,552-568,574-590 1i1m d1i1ma_ A:33-43,52-68,74-90 1i1m d1i1mb_ B:533-543,552-568,574-590 1i1m d1i1mc_ C:1033-1043,1052-1068,1074-1090 1a3g d1a3gb_ B:33-44,52-68,74-90 1iye d1iyeb_ B:33-44,52-68,74-90 1i1k d1i1ka_ A:33-44,52-68,74-90 1i1k d1i1kb_ B:533-544,552-568,574-590 1i1k d1i1kc_ C:1033-1044,1052-1068,1074-1090 1a3g d1a3ga_ A:33-44,52-68,74-90 2hhf d2hhfb1 B:572-584,592-608,613-629 1a3g d1a3gc_ C:33-44,52-68,74-90 2hhf d2hhfa1 A:72-84,92-108,113-129 189. d.259.1 Hypothetical protein HI1480 Hypothetical protein HI1480 beta-alpha(4)-beta-alpha-beta; segregated alpha-helical and beta-sheet subdomains; dimeric beta-sheet barrel: n=6, S=10 1mw5 d1mw5b_ B:14-19,19-38,130-141 1mw5 d1mw5a_ A:14-19,19-38,130-141 1mw5 d1mw5b_ B:14-19,19-38,99-113 1mw5 d1mw5a_ A:14-19,19-38,99-113 192. a.169.1 BEACH domain BEACH domain multihelical, complex architecture 1t77 d1t77b1 B:2137-2147,2201-2210,2221-2234 1t77 d1t77c1 C:2137-2147,2201-2209,2221-2234 1t77 d1t77a1 A:2137-2147,2201-2209,2221-2234 1mi1 d1mi1b1 B:2201-2211,2265-2273,2285-2298 1t77 d1t77d1 D:2137-2147,2201-2209,2221-2234 1mi1 d1mi1a1 A:2201-2211,2265-2273,2285-2298 197. d.213.1 VSV matrix protein VSV matrix protein beta-alpha(2)-beta(4)-alpha-beta(2); two layers: alpha/beta; bifurcated coiled beta-sheet: order of the first 5 strands: 23154 1lg7 d1lg7a_ A:59-75,80-93,101-116 199. d.276.1 Hypothetical protein yfbM Hypothetical protein yfbM beta-alpha(2)-beta-alpha(2)-beta(2)-alpha(n)-beta; 3 layers: a/b/a; antiparallel beta-sheet, order: 21543 1ryl d1rylb_ B:84-90,89-103,129-158 1ryl d1ryla_ A:83-90,89-103,129-158 202. d.248.1 Coproporphyrinogen III oxidase Coproporphyrinogen III oxidase alpha-beta(6)-alpha(2)-beta-alpha(n); 3 layers alpha/beta/alpha; antiparallel sheet: order 1234567 3dwr d3dwrb1 B:122-134,138-157,157-173 3dws d3dwsa1 A:83-99,249-259,261-270 1tlb d1tlbw_ W:109-123,274-284,287-296 1tlb d1tlba_ A:109-123,274-284,287-296 1tlb d1tlbq_ Q:109-123,274-284,287-296 3dwr d3dwrb1 B:86-99,249-259,261-270 1tlb d1tlbd_ D:109-123,274-284,287-296 1tlb d1tlbu_ U:109-123,274-284,287-296 3dwr d3dwra1 A:86-99,249-259,261-270 2qt8 d2qt8a1 A:83-99,249-259,261-270 2qt8 d2qt8b1 B:83-99,249-259,261-270 1tkl d1tkla_ A:108-123,274-283,287-296 3dws d3dwsb1 B:83-99,249-259,261-270 1tlb d1tlbs_ S:108-123,274-284,287-296 1vju d1vjub_ B:129-142,146-165,165-181 3dwr d3dwra1 A:121-134,138-157,157-173 2qt8 d2qt8b1 B:121-134,138-157,157-173 1vju d1vjua_ A:129-142,146-165,165-181 3dws d3dwsb1 B:121-134,138-157,157-173 2qt8 d2qt8a1 A:121-134,138-157,157-173 3dws d3dwsa1 A:121-134,138-157,157-173 1tkl d1tkla_ A:144-159,163-183,182-198 1tkl d1tklb_ B:144-159,163-183,182-198 1vju d1vjua_ A:93-107,257-267,269-278 1tlb d1tlbw_ W:144-159,163-183,182-198 1tlb d1tlba_ A:144-159,163-183,182-198 1tlb d1tlbd_ D:144-159,163-183,182-198 1tlb d1tlbq_ Q:144-159,163-183,182-198 1tkl d1tklb_ B:108-123,274-284,287-296 1tlb d1tlbs_ S:144-159,163-183,182-198 1tlb d1tlbu_ U:144-159,163-183,182-198 3dws d3dwsa1 A:83-99,227-249,261-270 2qt8 d2qt8a1 A:83-99,227-249,261-270 2qt8 d2qt8b1 B:83-99,227-249,261-270 3dws d3dwsb1 B:83-99,227-249,261-270 3dwr d3dwrb1 B:86-99,227-249,261-270 1tlb d1tlba_ A:109-123,252-274,287-296 3dwr d3dwra1 A:86-99,227-249,261-270 1tlb d1tlbd_ D:109-123,252-274,287-296 1tlb d1tlbq_ Q:109-123,252-274,287-296 1tlb d1tlbw_ W:109-123,252-274,287-296 1vju d1vjua_ A:93-107,235-257,269-278 1tlb d1tlbu_ U:109-123,252-274,287-296 1tlb d1tlbs_ S:108-123,252-274,287-296 1vju d1vjub_ B:93-107,235-257,269-278 1tkl d1tklb_ B:108-123,252-274,287-296 1tkl d1tkla_ A:108-123,252-274,287-296 203. d.129.4 Cell-division protein ZipA, C-terminal domain contains a single copy of this fold ! TBP-like beta-alpha-beta(4)-alpha 1f7x d1f7xa_ A:81-88,93-113,125-144 1y2g d1y2ga1 A:80-89,93-113,125-142 1s1j d1s1ja_ A:80-89,93-113,125-142 1f7w d1f7wa_ A:81-88,93-113,125-144 1s1s d1s1sa1 A:81-88,93-113,125-144 1f46 d1f46b_ B:80-89,93-113,125-144 1f47 d1f47b_ B:80-89,93-113,125-144 1s1s d1s1sb1 B:80-89,93-113,125-143 1f46 d1f46a_ A:80-89,93-113,125-144 1y2f d1y2fa1 A:80-88,93-113,125-144 1y2g d1y2gb1 B:80-88,93-113,125-144 1s1j d1s1jb_ B:80-88,93-113,125-144 205. d.115.1 YrdC/RibB YrdC/RibB core: alpha-beta(2)-alpha-beta-alpha(2)-beta(2)-alpha-beta-alpha-beta; 3 layers; mixed twisted sheet of 7 strands; order 7126354; strands 7 and 1 are parallel to each other 1iez d1ieza_ A:66-71,143-151,152-165 1k4p d1k4pa_ A:38-46,50-61,110-123 1k4o d1k4oa_ A:38-46,50-61,110-123 1k4i d1k4ia_ A:38-46,50-61,110-123 1k4l d1k4la_ A:37-46,50-61,110-123 1k49 d1k49a_ A:37-46,50-61,110-123 1g58 d1g58b_ B:40-47,51-62,110-123 1g57 d1g57a_ A:40-47,51-62,110-123 1g57 d1g57b_ B:40-47,51-62,110-123 1g58 d1g58a_ A:40-47,51-62,110-123 1pvy d1pvyb_ B:27-35,39-51,115-133 1snn d1snnb_ B:27-35,39-51,115-133 1pvy d1pvya_ A:27-35,39-51,115-133 1pvw d1pvwa_ A:27-35,39-51,115-133 1snn d1snna_ A:27-35,39-51,115-133 1pvw d1pvwb_ B:27-35,39-51,115-133 1pvw d1pvwc_ C:27-35,39-51,115-133 212. d.87.2 CO dehydrogenase flavoprotein C-terminal domain-like CO dehydrogenase flavoprotein C-domain-like core: beta(3,4)-alpha(3); alpha+beta sandwich 1n5w d1n5wc1 C:194-206,239-254,263-287 1t3q d1t3qf1 F:191-203,236-249,260-285 1t3q d1t3qc1 C:191-203,236-249,260-285 1n63 d1n63c1 C:194-206,239-254,263-287 1rm6 d1rm6e1 E:235-246,277-293,301-323 1sb3 d1sb3e1 E:235-246,277-293,301-323 1ffv d1ffvf1 F:194-206,239-254,263-286 1ffu d1ffuc1 C:194-206,239-254,263-286 1ffu d1ffuf1 F:194-206,239-254,263-286 1ffv d1ffvc1 C:194-206,239-254,263-286 1rm6 d1rm6b1 B:234-246,277-293,301-323 1fo4 d1fo4b4 B:474-478,479-495,504-528 1sb3 d1sb3b1 B:234-246,277-293,301-323 1n62 d1n62c1 C:194-206,239-254,263-286 3b9j d3b9jb1 B:474-478,479-495,504-528 1vdv d1vdvb4 B:474-478,479-495,504-528 1fiq d1fiqb1 B:474-478,479-495,504-528 1n62 d1n62f1 F:194-206,239-254,263-286 1zxi d1zxic1 C:194-206,239-254,263-286 1n60 d1n60c1 C:194-206,239-254,263-286 1n60 d1n60f1 F:194-206,239-254,263-286 1n61 d1n61f1 F:194-206,239-254,263-286 1n63 d1n63f1 F:194-206,239-254,263-286 1n61 d1n61c1 C:194-206,239-254,263-286 1zxi d1zxif1 F:194-206,239-254,263-286 1n5w d1n5wf1 F:194-206,239-254,263-286 1fo4 d1fo4a4 A:474-478,479-495,504-529 1v97 d1v97a4 A:474-478,479-495,504-529 1n5x d1n5xb4 B:474-478,479-495,504-529 1n5x d1n5xa4 A:474-478,479-495,504-529 1vdv d1vdva4 A:474-478,479-495,504-529 213. c.138.1 Indigoidine synthase A-like Indigoidine synthase A-like core: 3 layers, a/b/a; parallel beta-sheet of 7 strands, order 2134756 1vkm d1vkme_ E:12-18,26-45,63-74 1vkm d1vkmf_ F:12-18,26-45,63-74 1vkm d1vkmd_ D:12-18,26-45,63-74 1vkm d1vkmc_ C:12-18,26-45,63-74 1vkm d1vkmb_ B:12-18,26-45,63-74 1vkm d1vkma_ A:12-18,26-45,63-74 226. e.51.1 Urocanase Urocanase 3 domains; d1: alpha+beta [alpha(2)-beta(3); mixed sheet: 213]; d2: alpha/beta of the NAD(P)-binding Rossmann-fold superfamily (scop_sf 51735, most similar to scop_fa 51883 and scop_fa 51736); d3: alpha+beta of the glutamine synthetase/guanido kinase fold (scop_cf 55930); d1 and d3 form a single beta-sheet 1x87 d1x87b_ B:402-409,409-427,506-532 1uwk d1uwka_ A:407-414,414-432,511-537 1uwk d1uwkb_ B:407-414,414-432,511-537 1w1u d1w1ua_ A:407-414,414-432,511-537 1uwl d1uwlb_ B:407-414,414-432,511-537 1w1u d1w1ub_ B:407-414,414-432,511-537 1uwl d1uwla_ A:407-414,414-432,511-537 228. c.111.1 Activating enzymes of the ubiquitin-like proteins transfer adenylyl group to the C-terminal carboxyl group of the ubiquitin and MoaD/ThiS-related proteins ! the ATP nucleotide-binding site is similar to that of the NAD-binding Rossmann-folds ! Activating enzymes of the ubiquitin-like proteins 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 32145678; strands 6 and 8 are antiparallel to the rest 3dbh d3dbha1 A:167-172,282-291,302-320 2nvu d2nvua1 A:167-172,282-291,302-320 3dbl d3dble1 E:167-172,282-291,302-320 3dbr d3dbra1 A:167-172,282-291,302-320 1yov d1yova1 A:167-172,282-291,302-320 3dbl d3dblg1 G:167-172,282-291,302-320 3dbh d3dbhg1 G:167-172,282-291,302-320 1r4m d1r4ma_ A:167-172,282-291,302-320 1tt5 d1tt5a_ A:167-172,282-291,302-320 1r4m d1r4mg_ G:167-172,282-291,302-320 1r4m d1r4mc_ C:167-172,282-291,302-320 3dbh d3dbhe1 E:167-172,282-291,302-320 1r4m d1r4me_ E:167-172,282-291,302-320 1tt5 d1tt5c_ C:167-172,282-291,302-320 1r4n d1r4na_ A:167-172,282-291,302-320 1r4n d1r4ng_ G:167-172,282-291,302-320 3dbr d3dbre1 E:167-172,282-291,302-320 3dbr d3dbrg1 G:167-172,282-291,302-320 1r4n d1r4ne_ E:167-172,282-291,302-320 1r4n d1r4nc_ C:167-172,282-291,302-320 3dbr d3dbrc1 C:167-172,282-291,302-320 3dbl d3dbla1 A:167-172,282-291,302-320 3dbl d3dblc1 C:167-172,282-291,302-320 1yov d1yovc1 C:167-172,282-291,302-320 3dbh d3dbhc1 C:167-172,282-291,302-320 235. d.36.1 Chalcone isomerase Chalcone isomerase beta(3)-alpha(2)-beta-alpha(2)-beta3; 2 layers alpha/beta; antiparallel sheet: order 1234567 1jx1 d1jx1d_ D:47-56,180-193,198-216 1jx0 d1jx0a_ A:42-56,180-193,198-216 1jx1 d1jx1a_ A:43-56,180-193,198-216 1eyq d1eyqa_ A:42-56,180-193,198-215 1eyq d1eyqb_ B:42-56,180-193,198-215 1fm7 d1fm7b_ B:42-56,180-193,198-215 1jep d1jepa_ A:42-56,180-193,198-215 1fm8 d1fm8a_ A:42-56,180-193,198-215 1fm8 d1fm8b_ B:42-56,180-193,198-215 1jep d1jepb_ B:42-56,180-193,198-215 1fm7 d1fm7a_ A:42-56,180-193,198-215 1jx1 d1jx1c_ C:42-56,180-193,198-215 1jx1 d1jx1b_ B:42-56,180-193,198-216 1eyp d1eypa_ A:42-56,180-193,198-215 1jx1 d1jx1b_ B:24-41,77-87,180-193 236. b.80.6 Stabilizer of iron transporter SufD superhelix turns are made of two very long strands each ! Single-stranded right-handed beta-helix superhelix turns are made of parallel beta-strands and (short) turns 1vh4 d1vh4b_ B:295-307,381-395,403-418 1vh4 d1vh4a_ A:295-308,381-395,403-418 1vh4 d1vh4b_ B:263-278,381-395,403-418 1vh4 d1vh4a_ A:263-278,381-395,403-418 240. a.7.13 XseB-like helix-swapped homodimer ! Spectrin repeat-like 3 helices; bundle, closed, left-handed twist; up-and-down 1vp7 d1vp7c_ C:14-18,19-37,40-79 1vp7 d1vp7e_ E:14-18,19-37,40-79 1vp7 d1vp7a_ A:14-18,19-37,40-80 1vp7 d1vp7b_ B:14-18,19-37,40-82 241. d.346.1 SARS Nsp1-like SARS Nsp1-like complex alpha+beta fold; contains mixed beta-sheet barrel, n=6, S=10 2hsx d2hsxa1 A:39-44,46-54,83-90 2gdt d2gdta1 A:39-44,46-54,83-90 244. d.33.1 SecB-like SecB-like beta(4)-alpha(2); two layers: alpha/beta; antiparallel sheet: order 1432 1ozb d1ozbb_ B:44-58,99-131,141-151 1ozb d1ozbh_ H:44-58,99-131,141-151 1ozb d1ozbd_ D:44-58,99-131,141-151 1ozb d1ozbg_ G:44-58,99-131,141-151 1qyn d1qyna_ A:38-51,90-122,132-142 1ozb d1ozbc_ C:44-58,99-131,141-151 1qyn d1qynd_ D:38-51,90-122,132-144 1qyn d1qync_ C:38-51,90-122,132-140 1qyn d1qynb_ B:38-51,90-122,132-141 1ozb d1ozbe_ E:44-59,99-131,141-155 1fx3 d1fx3c_ C:44-58,99-131,141-156 1fx3 d1fx3d_ D:44-59,99-131,141-151 1fx3 d1fx3a_ A:44-59,99-131,141-157 1ozb d1ozba_ A:44-59,99-131,141-159 1fx3 d1fx3b_ B:44-59,99-131,141-163 1ozb d1ozbf_ F:44-58,99-131,141-162 245. d.281.1 Hemolytic lectin CEL-III, C-terminal domain Hemolytic lectin CEL-III, C-terminal domain unusual fold 2z49 d2z49b3 B:285-302,319-333,342-360 1vcl d1vclb3 B:285-302,319-333,342-359 2z48 d2z48a3 A:285-302,319-333,342-359 2z48 d2z48b3 B:285-302,319-333,342-359 2z49 d2z49a3 A:285-302,319-333,342-359 1vcl d1vcla3 A:285-302,319-333,342-359 249. d.261.1 Hypothetical protein PH1602 Hypothetical protein PH1602 complex alpha+beta fold; contains a region of similarity to the ferredoxin-like fold 1uc2 d1uc2b_ B:97-106,162-169,275-312 1uc2 d1uc2a_ A:97-106,162-169,275-312 253. c.112.1 Glycerol-3-phosphate (1)-acyltransferase some topological similarity to the dihydrofolate reductase fold ! Glycerol-3-phosphate (1)-acyltransferase 3 layers: a/b/a; mixed beta-sheet of 9 strands, order 918736452; strands 1, 2 and 8 are antiparallel to the rest 1k30 d1k30a_ A:130-138,251-266,322-352 1iuq d1iuqa_ A:130-138,251-266,322-352 254. a.166.1 RuBisCo LSMT C-terminal, substrate-binding domain RuBisCo LSMT C-terminal, substrate-binding domain multihelical; irregular array of long and short helices 2h21 d2h21c1 C:310-318,389-412,427-458 2h23 d2h23c1 C:310-318,389-412,427-458 1p0y d1p0ya1 A:310-318,389-412,427-458 2h21 d2h21a1 A:310-318,389-412,427-458 2h2e d2h2ec1 C:310-318,389-412,427-458 1p0y d1p0yc1 C:310-318,389-412,427-458 1mlv d1mlvc1 C:310-318,389-412,427-458 2h2j d2h2jc1 C:310-318,389-412,427-458 1ozv d1ozvc1 C:310-318,389-412,427-458 1ozv d1ozva1 A:310-318,389-412,427-458 2h21 d2h21b1 B:310-318,389-412,427-458 2h23 d2h23a1 A:310-318,389-412,427-458 2h2e d2h2ea1 A:310-318,389-412,427-458 2h23 d2h23b1 B:310-318,389-412,427-458 2h2j d2h2ja1 A:310-318,389-412,427-458 1mlv d1mlvb1 B:310-318,389-412,427-458 1p0y d1p0yb1 B:310-318,389-412,427-458 1mlv d1mlva1 A:310-318,389-412,427-458 2h2e d2h2eb1 B:310-318,389-412,427-458 1ozv d1ozvb1 B:310-318,389-412,427-458 2h2j d2h2jb1 B:310-318,389-412,427-458 259. a.264.1 Duffy binding domain-like Duffy binding domain-like consist of two subdomains, each containing a three-helical bundle 1zro d1zroa1 A:23-28,174-194,212-245 1zro d1zrob1 B:23-28,174-194,212-245 1zrl d1zrla2 A:330-334,480-508,515-550 1zro d1zroa2 A:330-334,480-508,515-550 1zro d1zrob2 B:330-334,480-508,515-550 1zrl d1zrla1 A:22-28,174-203,212-245 271. e.71.1 AF1531-like AF1531-like 2 domains; d1: incomplete barrel similar to the OB-fold domain of ribosomal L2 protein, d2: six helices, array 2i5h d2i5ha1 A:50-59,93-112,170-186 277. d.179.1 Substrate-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase unusual fold 1dq9 d1dq9d4 D:529-547,752-765,830-860 1dq9 d1dq9a4 A:529-547,752-765,830-860 1dq9 d1dq9c4 C:529-547,752-765,830-860 1dqa d1dqad4 D:529-547,752-765,830-860 1hw9 d1hw9d2 D:529-547,752-765,830-859 1dq9 d1dq9b4 B:529-547,752-765,830-860 1dq8 d1dq8c4 C:529-547,752-765,830-860 1dqa d1dqac4 C:529-547,752-765,830-860 1dqa d1dqaa4 A:529-547,752-765,830-860 1hw8 d1hw8d2 D:529-547,752-765,830-859 1hwl d1hwld2 D:529-547,752-765,830-860 1hwj d1hwjd2 D:529-547,752-765,830-860 1hwk d1hwkd2 D:529-547,752-765,830-860 1dq8 d1dq8b4 B:529-547,752-765,830-860 1hwj d1hwja2 A:529-547,752-765,830-860 1hwj d1hwjc2 C:529-547,752-765,830-860 1hwj d1hwjb2 B:529-547,752-765,830-860 1hwl d1hwlb2 B:529-547,752-765,830-860 1hwk d1hwkb2 B:529-547,752-765,830-860 1dqa d1dqab4 B:529-547,752-765,830-860 1hwi d1hwid2 D:529-547,752-765,830-860 1hw9 d1hw9c2 C:529-547,752-765,830-860 1hw9 d1hw9a2 A:529-547,752-765,830-860 1hwk d1hwkc2 C:529-547,752-765,830-860 1hwl d1hwla2 A:529-547,752-765,830-860 1hwl d1hwlc2 C:529-547,752-765,830-860 1dq8 d1dq8a4 A:529-547,752-765,830-860 1hw8 d1hw8a2 A:529-547,752-765,830-860 1hw9 d1hw9b2 B:529-547,752-765,830-860 1dq8 d1dq8d4 D:529-547,752-765,830-860 1hwi d1hwic2 C:529-547,752-765,830-860 1hwi d1hwia2 A:529-547,752-765,830-860 1hwi d1hwib2 B:529-547,752-765,830-860 1hw8 d1hw8c2 C:529-547,752-765,830-860 1hwk d1hwka2 A:529-547,752-765,830-861 1hw8 d1hw8b2 B:529-547,752-765,830-860 278. e.45.1 Antivirulence factor Antivirulence factor contains a helical bundle with a buried helix and an alpha+beta insert domain 1nh1 d1nh1a_ A:170-182,219-239,243-262 2nud d2nudb1 B:170-182,219-239,243-262 2nud d2nuda1 A:170-182,219-239,243-262 2nun d2nuna1 A:170-182,219-239,243-262