2. d.153.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) N-terminal residue provides two catalytic groups, nucleophile and proton donor ! Ntn hydrolase-like 4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing 2pva d2pvab_ B:101-113,115-127,141-149 2imh d2imha1 A:48-62,64-77,81-89 1z7q d1z7qh1 H:48-71,74-90,94-103 1z7q d1z7qv1 V:48-71,74-90,94-103 2gpl d2gpln1 N:48-72,75-91,96-105 2gpl d2gpl21 2:48-72,75-91,96-105 1g0u d1g0u2_ 2:48-72,75-91,96-105 2f16 d2f16n1 N:48-72,75-91,96-105 1ryp d1ryph_ H:48-71,74-90,94-103 2f16 d2f1621 2:48-72,75-91,96-105 3e47 d3e4721 2:48-72,75-91,96-105 3e47 d3e47n1 N:48-72,75-91,96-105 1g0u d1g0un_ N:48-72,75-91,96-105 1g65 d1g652_ 2:48-72,75-91,96-105 3bdm d3bdmn1 N:48-72,75-91,96-105 3bdm d3bdm11 1:48-72,75-91,96-105 1g65 d1g65n_ N:48-72,75-91,96-105 2i3o d2i3od1 D:416-432,434-441,487-496 2i3o d2i3oc1 C:416-432,434-441,487-496 2i3o d2i3oa1 A:416-432,434-441,487-496 2i3o d2i3ob1 B:416-432,434-441,487-496 2e0w d2e0wa1 A:55-69,71-88,391-399 1q5r d1q5rh_ H:48-71,75-91,100-108 1q5r d1q5ri_ I:48-71,75-91,100-108 1q5r d1q5rn_ N:48-71,75-91,100-108 1q5r d1q5rk_ K:48-71,75-91,100-108 1q5r d1q5rj_ J:48-71,75-91,100-108 1q5r d1q5rm_ M:48-71,75-91,100-108 1q5r d1q5rl_ L:48-71,75-91,100-108 1j2q d1j2qm_ M:48-71,75-91,96-106 1iru d1iruh_ H:48-71,75-91,95-104 1iru d1iruv_ V:48-71,75-91,95-104 1jd2 d1jd2u_ U:48-72,75-91,97-105 1j2q d1j2qh_ H:48-71,75-91,96-106 2pva d2pvac_ C:101-113,115-126,141-149 2h6j d2h6jm1 M:48-71,75-91,100-108 1j2q d1j2qi_ I:48-71,75-91,96-106 2h6j d2h6jk1 K:48-71,75-91,100-108 1yau d1yauk1 K:48-71,75-91,96-105 2h6j d2h6jj1 J:48-71,75-91,100-108 3e47 d3e47v1 V:48-71,75-91,96-10A 2zcy d2zcyv1 V:48-71,75-91,96-10A 1jd2 d1jd2h_ H:48-71,75-91,96-105A 3e47 d3e47h1 H:48-71,75-91,96-10A 2zcy d2zcyh1 H:48-71,75-91,96-10A 1iru d1irul_ L:48-71,75-91,96-105 1iru d1iruz_ Z:48-71,75-91,96-105 2h6j d2h6jn1 N:48-71,75-91,100-108 1yau d1yauh1 H:48-71,75-91,96-105 2h6j d2h6ji1 I:48-71,75-91,100-108 1yar d1yarm1 M:48-71,75-91,96-105 1yau d1yauj1 J:48-71,75-91,96-105 2h6j d2h6jl1 L:48-71,75-91,100-108 1ya7 d1ya7i1 I:48-71,75-91,96-105 1yar d1yari1 I:48-71,75-91,96-105 1yau d1yaul1 L:48-71,75-91,96-105 1ya7 d1ya7h1 H:48-71,75-91,96-105 2e0w d2e0wb1 B:55-69,71-88,391-399 2h6j d2h6jh1 H:48-71,75-91,100-108 1jd2 d1jd2n_ N:48-72,75-91,97-105 1yau d1yaui1 I:48-71,75-91,96-105 1ya7 d1ya7j1 J:48-71,75-91,96-105 1yar d1yarh1 H:48-71,75-91,96-105 2fak d2fakn1 N:48-72,75-91,97-105 1ya7 d1ya7m1 M:48-71,75-91,96-105 2pva d2pvad_ D:101-113,115-126,141-149 2fak d2fak21 2:48-72,75-91,97-105 3e47 d3e47k1 K:48-71,75-91,96-105 2i3o d2i3oa1 A:19-33,35-52,331-339 3e47 d3e47y1 Y:48-71,75-91,96-105 2i3o d2i3od1 D:19-33,35-52,331-339 2i3o d2i3oc1 C:19-33,35-52,331-339 1yau d1yaun1 N:48-71,75-91,96-105 1yau d1yaum1 M:48-71,75-91,96-105 2nlz d2nlzd1 D:293-315,440-459,470-474 2zcy d2zcyn1 N:48-72,75-91,97-105 2zcy d2zcy11 1:48-72,75-91,97-105 2fak d2fakk1 K:48-71,75-91,96-105 3pva d3pvah_ H:101-113,115-126,141-149 2fak d2faky1 Y:48-71,75-91,96-105 2nlz d2nlzb1 B:293-315,440-459,470-474 2i3o d2i3ob1 B:19-33,35-52,331-339 3pva d3pvac_ C:101-113,115-126,141-149 3pva d3pvad_ D:101-113,115-126,141-149 1xff d1xffb_ B:122-138,140-153,153-163 3pva d3pvab_ B:101-113,115-126,141-149 3pva d3pvaf_ F:101-113,115-126,141-149 2j6h d2j6ha2 A:122-138,140-153,153-163 2nlz d2nlzc1 C:293-315,440-459,470-474 2f16 d2f16k1 K:48-71,75-91,96-105 3pva d3pvag_ G:101-113,115-126,141-149 3pva d3pvaa_ A:101-113,115-126,141-149 1ryp d1rypl_ L:48-71,75-91,96-105 1m4y d1m4yb_ B:49-68,70-85,93-100 1xfg d1xfgb_ B:122-138,140-153,153-163 2nlz d2nlza1 A:293-315,440-459,470-474 2f16 d2f16y1 Y:48-71,75-91,96-105 3d29 d3d29k1 K:48-71,75-91,96-105 1ryp d1rypz_ Z:48-71,75-91,96-105 3pva d3pvae_ E:101-113,115-126,141-149 3d29 d3d29n1 N:48-72,75-91,97-105 2zcy d2zcyk1 K:48-71,75-91,96-105 2gpl d2gplk1 K:48-71,75-91,96-105 3d29 d3d29y1 Y:48-71,75-91,96-105 2zcy d2zcyy1 Y:48-71,75-91,96-105 3d29 d3d2921 2:48-72,75-91,97-105 2gpl d2gply1 Y:48-71,75-91,96-105 1g65 d1g65y_ Y:48-71,75-91,96-105 3bdm d3bdmy1 Y:48-71,75-91,96-105 3bdm d3bdmk1 K:48-71,75-91,96-105 1xff d1xffa_ A:122-138,140-153,153-163 1g65 d1g65k_ K:48-71,75-91,96-105 1jd2 d1jd2r_ R:48-71,75-91,96-105 1xfg d1xfga_ A:122-138,140-153,153-163 1ryp d1rypv_ V:49-71,74-90,94-103 2pva d2pvaa_ A:101-113,115-126,141-149 1jd2 d1jd2k_ K:48-71,75-91,96-105 1jxa d1jxab2 B:122-138,140-153,153-163 1m4y d1m4ya_ A:49-68,70-85,93-100 1apy d1apy.2 D:244-256,258-275,278-286 1ryp d1ryp1_ 1:48-71,76-92,97-107 2zcy d2zcyz1 Z:48-70A,75-91,96-106 1m4y d1m4yc_ C:49-68,70-85,93-100 2zcy d2zcyl1 L:48-70A,75-91,96-106 1g0u d1g0ul_ L:48-70A,75-91,96-106 1yyf d1yyfc1 C:56-75,77-92,101-107 2h6j d2h6jd1 D:67-90,95-114,119-128 1z7q d1z7qm1 M:57-80,85-101,106-116 1apz d1apz.2 D:244-256,258-275,278-286 2h6j d2h6ja1 A:67-90,95-114,119-128 3e47 d3e47z1 Z:48-70A,75-91,96-106 1g65 d1g65l_ L:48-70A,75-91,96-106 2f16 d2f16z1 Z:48-70A,75-91,96-106 1jjw d1jjwc_ C:49-68,70-85,93-100 2gpl d2gplz1 Z:48-70A,75-91,96-106 1jjw d1jjwb_ B:49-68,70-85,93-100 3e47 d3e47l1 L:48-70A,75-91,96-106 1g3k d1g3kc_ C:49-68,70-85,93-100 2gpl d2gpll1 L:48-70A,75-91,96-106 2f16 d2f16l1 L:48-70A,75-91,96-106 1yyf d1yyfd1 D:56-75,77-92,101-107 2h6j d2h6jc1 C:67-90,95-114,119-128 2h6j d2h6jf1 F:67-90,95-114,119-128 3bdm d3bdml1 L:48-70A,75-91,96-106 2fak d2fakz1 Z:48-70A,75-91,96-106 3bdm d3bdmz1 Z:48-70A,75-91,96-106 1iru d1irus_ S:81-104,108-120,138-147 1iru d1irue_ E:81-104,108-120,138-147 1g0u d1g0uz_ Z:48-70A,75-91,96-106 2j6h d2j6hb2 B:122-138,140-153,153-163 1g3k d1g3kb_ B:49-68,70-85,93-100 2h6j d2h6jb1 B:67-90,95-114,119-128 2fak d2fakl1 L:48-70A,75-91,96-106 1g3i d1g3in_ N:49-68,70-84,92-100 1g4a d1g4ac_ C:49-68,70-86,93-100 1jd2 d1jd2i_ I:48-71,75-91,96-105 1ryp d1rypm_ M:48-71,76-92,97-107 1e94 d1e94b_ B:49-68,70-85,93-100 1ht2 d1ht2i_ I:49-68,70-85,93-100 3d29 d3d29z1 Z:48-70A,75-91,96-106 3d29 d3d29l1 L:48-70A,75-91,96-106 1g4a d1g4ad_ D:49-68,70-86,93-100 1e94 d1e94a_ A:49-68,70-85,93-100 1ht2 d1ht2a_ A:49-68,70-85,93-100 2h6j d2h6je1 E:67-90,95-114,119-128 2z3a d2z3ai1 I:55-74,76-92,100-106 2z3a d2z3al1 L:55-74,76-92,100-106 1q5r d1q5rd_ D:67-90,95-114,119-128 2z3a d2z3af1 F:55-74,76-92,100-106 2z3a d2z3ac1 C:55-74,76-92,100-106 2z3a d2z3ae1 E:55-74,76-92,100-106 2z3a d2z3ab1 B:55-74,76-92,100-106 2z3a d2z3aj1 J:55-74,76-92,100-106 1q5r d1q5rf_ F:67-90,95-114,119-128 2z3a d2z3ad1 D:55-74,76-92,100-106 2z3a d2z3ak1 K:55-74,76-92,100-106 2bpl d2bpla2 A:122-138,140-153,153-163 1q5r d1q5re_ E:67-90,95-114,119-128 1q5r d1q5rb_ B:67-90,95-114,119-128 1q5r d1q5rg_ G:67-90,95-114,119-128 1pma d1pmaz_ Z:48-71,75-91,97-105 1q5r d1q5rc_ C:67-90,95-114,119-128 2z3a d2z3ah1 H:55-74,76-92,100-106 2z3a d2z3aa1 A:55-74,76-92,100-106 1apy d1apy.1 B:244-256,258-275,278-286 2z3a d2z3ag1 G:55-74,76-92,100-106 2bpl d2bplb2 B:122-138,140-153,153-163 1ht1 d1ht1z_ Z:49-68,70-85,93-100 1q5r d1q5ra_ A:67-90,95-114,119-128 1iru d1irux_ X:56-79,83-99,104-113 2z3b d2z3bh1 H:55-74,76-92,100-106 1iru d1iruj_ J:56-79,83-99,104-113 2e0w d2e0wb1 B:483-502,504-511,551-560 1pma d1pma2_ 2:48-71,75-91,97-105 1pma d1pmas_ S:48-71,75-91,97-105 3c92 d3c92l1 L:48-71,75-91,97-105 3c91 d3c91l1 L:48-71,75-91,97-105 3c92 d3c92z1 Z:48-71,75-91,97-105 3c91 d3c91z1 Z:48-71,75-91,97-105 2dbx d2dbx.1 B:483-502,504-511,551-560 3c92 d3c9221 2:48-71,75-91,97-105 3c91 d3c9121 2:48-71,75-91,97-105 1pma d1pmau_ U:48-71,75-91,97-105 3c92 d3c92n1 N:48-71,75-91,97-105 3c91 d3c91n1 N:48-71,75-91,97-105 2z3b d2z3bf1 F:55-74,76-91,100-106 2dbw d2dbw.1 B:483-502,504-511,551-560 1ht2 d1ht2j_ J:49-68,70-85,93-100 1pma d1pmap_ P:48-71,75-91,97-105 1j2q d1j2qn_ N:48-71,75-91,97-106 1j2q d1j2qk_ K:48-71,75-91,97-106 3e47 d3e47x1 X:48-71,75-91,96-10A 3c92 d3c92i1 I:48-71,75-91,97-105 3c91 d3c91w1 W:48-71,75-91,97-105 3c92 d3c92w1 W:48-71,75-91,97-105 3c91 d3c91i1 I:48-71,75-91,97-105 1jd2 d1jd2s_ S:48-70A,75-91,96-106 1pma d1pmat_ T:48-71,75-91,97-105 1ryp d1rypx_ X:47-70,74-90,95-105 3c92 d3c9211 1:48-71,75-91,97-105 3c91 d3c9111 1:48-71,75-91,97-105 3c91 d3c91m1 M:48-71,75-91,97-105 1j2q d1j2ql_ L:48-71,75-91,97-106 1pma d1pmam_ M:81-104,108-126,134-142 3c92 d3c92m1 M:48-71,75-91,97-105 2dbu d2dbu.1 B:483-502,504-511,551-560 1apz d1apz.1 B:244-256,258-275,278-286 1j2q d1j2qj_ J:48-71,75-91,97-106 2dbu d2dbu.2 D:483-502,504-511,551-560 2dbx d2dbx.2 D:483-502,504-511,551-560 3e47 d3e47j1 J:48-71,75-91,96-10A 1pma d1pma1_ 1:48-71,75-91,97-105 1g0u d1g0ud_ D:81-104,108-123,133-142 1g3i d1g3ik_ K:49-68,70-84,93-100 1pma d1pmav_ V:48-71,75-91,97-105 2z3b d2z3bl1 L:55-74,76-92,100-106 2zcy d2zcyx1 X:48-71,75-91,96-10B 1jxa d1jxaa2 A:122-138,140-153,153-163 1pma d1pmaj_ J:81-104,108-126,134-142 3c92 d3c92k1 K:48-71,75-91,97-105 3c91 d3c91k1 K:48-71,75-91,97-105 1pma d1pmar_ R:48-71,75-91,97-105 3c91 d3c91y1 Y:48-71,75-91,97-105 3c92 d3c92y1 Y:48-71,75-91,97-105 2zcy d2zcyj1 J:48-71,75-91,96-10B 2z3b d2z3bk1 K:55-74,76-92,100-106 2dg5 d2dg5.1 B:483-502,504-511,551-560 3c92 d3c92h1 H:48-71,75-91,97-105 3c91 d3c91h1 H:48-71,75-91,97-105 1pma d1pmab_ B:48-71,75-91,97-105 3c92 d3c92v1 V:48-71,75-91,97-105 3c91 d3c91v1 V:48-71,75-91,97-105 2e0y d2e0y.1 B:483-502,504-511,551-560 2dbw d2dbw.2 D:483-502,504-511,551-560 1pma d1pmay_ Y:48-71,75-91,97-105 1pma d1pmad_ D:81-104,108-126,134-142 1pma d1pman_ N:81-104,108-126,134-142 1ht1 d1ht1y_ Y:49-68,70-85,93-100 1g65 d1g65r_ R:81-104,108-123,133-142 2dg5 d2dg5.2 D:483-502,504-511,551-560 1pma d1pmax_ X:48-71,75-91,97-105 1pma d1pmak_ K:81-104,108-126,134-142 3c92 d3c92j1 J:48-71,75-91,97-105 3c91 d3c91j1 J:48-71,75-91,97-105 1g65 d1g65d_ D:81-104,108-123,133-142 3c92 d3c92x1 X:48-71,75-91,97-105 3c91 d3c91x1 X:48-71,75-91,97-105 1pma d1pmaq_ Q:48-71,75-91,97-105 2nlz d2nlzb1 B:30-44,46-63,358-366 3bdm d3bdmx1 X:48-71,75-91,96-10B 3bdm d3bdmj1 J:48-71,75-91,96-10B 1g4b d1g4bm_ M:49-68,70-85,93-100 1g4b d1g4bo_ O:49-68,70-85,93-100 1hqy d1hqyb_ B:49-68,70-85,93-100 1pma d1pmaw_ W:48-71,75-91,97-105 1pma d1pmaf_ F:81-104,108-126,134-142 1ya7 d1ya7k1 K:48-71,75-91,97-105 2e0y d2e0y.2 D:483-502,504-511,551-560 1yar d1yarl1 L:48-71,75-91,97-105 1ryp d1rypy_ Y:48-71,75-93,98-108 1jd2 d1jd2d_ D:81-104,108-123,133-142 1pma d1pmah_ H:81-104,108-126,134-142 1yar d1yark1 K:48-71,75-91,97-105 1ea0 d1ea0b3 B:272-288,290-300,328-338 2vdc d2vdcb3 B:272-288,290-300,328-338 2vdc d2vdcf3 F:272-288,290-300,328-338 2vdc d2vdcd3 D:272-288,290-300,328-338 1q5q d1q5qd_ D:67-90,95-114,119-128 1q5q d1q5qe_ E:67-90,95-114,119-128 1q5q d1q5qg_ G:67-90,95-114,119-128 1pma d1pmal_ L:81-104,108-126,134-142 2bpl d2bplc2 C:122-138,140-152,153-163 2fak d2fakr1 R:81-104,108-123,133-142 1jd2 d1jd2l_ L:48-70A,75-91,96-106 1q5q d1q5qf_ F:67-90,95-114,119-128 1pma d1pmai_ I:81-104,108-126,134-142 1q5q d1q5qk_ K:48-71,75-97,99-108 1q5q d1q5qn_ N:48-71,75-97,99-108 1pma d1pmao_ O:81-104,108-126,134-142 1q5q d1q5qc_ C:67-90,95-114,119-128 1q5q d1q5qj_ J:48-71,75-97,99-108 1gk0 d1gk0.2 D:148-159,161-172,175-184 1ofh d1ofhh_ H:49-68,70-84,93-100 1q5q d1q5qh_ H:48-71,75-97,99-108 1q5q d1q5ql_ L:48-71,75-97,99-108 1yar d1yarf1 F:81-104,108-126,134-142 1q5q d1q5qb_ B:67-90,95-114,119-128 1q5q d1q5qm_ M:48-71,75-97,99-108 2nlz d2nlzc1 C:30-44,46-63,358-366 1gk0 d1gk0.1 B:148-159,161-172,175-184 2nlz d2nlzd1 D:30-44,46-63,358-366 1g65 d1g65z_ Z:48-70A,75-91,97-106 1g3i d1g3il_ L:49-68,70-84,93-100 1q5q d1q5qa_ A:67-90,95-114,119-128 1k5s d1k5s.1 B:146-160,162-174,174-184 1q5q d1q5qi_ I:48-71,75-97,99-108 1gk1 d1gk1.2 D:148-159,161-172,175-184 1g4b d1g4bn_ N:49-68,70-85,93-100 1g4b d1g4bp_ P:49-68,70-85,93-100 2z3b d2z3bg1 G:55-74,76-92,100-106 2z3b d2z3ba1 A:55-74,76-92,100-106 1gk1 d1gk1.1 B:148-159,161-172,175-184 1q15 d1q15c2 C:80-93,93-101,102-111 1yar d1yarj1 J:48-71,75-91,97-105 1ned d1neda_ A:48-67,75-90,97-104 1ned d1nedb_ B:48-67,75-90,97-104 1jd2 d1jd2j_ J:48-71,75-91,96-105A 1g0u d1g0uj_ J:48-71,75-91,96-105B 2nlz d2nlza1 A:30-44,46-63,358-366 1q19 d1q19c2 C:80-93,93-101,102-111 2z3b d2z3bc1 C:55-74,76-92,100-106 1yar d1yarc1 C:81-104,108-126,134-142 1g0u d1g0ux_ X:48-71,75-91,96-105B 1jw0 d1jw0.1 B:317-328,330-341,344-353 1g65 d1g65x_ X:48-71,75-91,96-105B 1g0u d1g0uy_ Y:48-71,75-91,97-105 2z3b d2z3bj1 J:55-74,76-92,100-106 1ryp d1rypr_ R:78-101,105-123,131-138 2fak d2fakx1 X:48-71,75-91,96-10B 1yar d1yarn1 N:48-71,75-91,97-105 1or0 d1or0.1 B:148-159,161-172,175-184 1g3i d1g3ii_ I:49-68,70-84,93-100 1yar d1yard1 D:81-104,108-126,134-142 2fak d2fakj1 J:48-71,75-91,96-10B 1q15 d1q15b2 B:80-93,93-101,102-111 3d29 d3d29j1 J:48-71,75-91,96-10B 1g0u d1g0uv_ V:48-71,75-91,97-105A 1k5q d1k5q.1 B:146-160,162-174,174-184 3d29 d3d29x1 X:48-71,75-91,96-10B 1or0 d1or0.2 D:148-159,161-172,175-184 1g0u d1g0uk_ K:48-71,75-91,97-105 1ya7 d1ya7n1 N:48-71,75-91,97-105 2e0x d2e0x.1 B:483-502,504-511,551-560 1g4a d1g4aa_ A:49-68,70-84,93-100 1ryp d1rypd_ D:78-101,105-123,131-138 1iru d1irui_ I:48-71,75-91,96-105 3c92 d3c92q1 Q:81-104,108-126,134-142 3c92 d3c92f1 F:81-104,108-126,134-142 3c91 d3c91q1 Q:81-104,108-126,134-142 3c91 d3c91r1 R:81-104,108-126,134-142 3c92 d3c92s1 S:81-104,108-126,134-142 3c92 d3c92d1 D:81-104,108-126,134-142 3c92 d3c92c1 C:81-104,108-126,134-142 3c92 d3c92o1 O:81-104,108-126,134-142 3c91 d3c91u1 U:81-104,108-126,134-142 3c91 d3c91c1 C:81-104,108-126,134-142 3c91 d3c91o1 O:81-104,108-126,134-142 3c92 d3c92p1 P:81-104,108-126,134-142 3c92 d3c92a1 A:81-104,108-126,134-142 3c92 d3c92t1 T:81-104,108-126,134-142 3c91 d3c91p1 P:81-104,108-126,134-142 3c92 d3c92e1 E:81-104,108-126,134-142 3c91 d3c91f1 F:81-104,108-126,134-142 3c92 d3c92u1 U:81-104,108-126,134-142 3c91 d3c91d1 D:81-104,108-126,134-142 1pma d1pmaa_ A:81-104,108-126,134-142 3c91 d3c91s1 S:81-104,108-126,134-142 3c91 d3c91b1 B:81-104,108-126,134-142 3c91 d3c91e1 E:81-104,108-126,134-142 3c92 d3c92g1 G:81-104,108-126,134-142 3c91 d3c91g1 G:81-104,108-126,134-142 3c92 d3c92r1 R:81-104,108-126,134-142 3c91 d3c91a1 A:81-104,108-126,134-142 2gpl d2gplx1 X:48-71,75-91,96-10B 3c91 d3c91t1 T:81-104,108-126,134-142 3c92 d3c92b1 B:81-104,108-126,134-142 2gpl d2gplj1 J:48-71,75-91,96-10B 1jd2 d1jd2o_ O:48-71,75-91,97-105A 2h6j d2h6jg1 G:67-90,95-114,120-128 1ryp d1rypk_ K:48-71,75-93,98-109 1iru d1iruw_ W:48-71,75-91,96-105 1k7d d1k7d.1 B:146-160,162-174,174-184 1jn9 d1jn9.2 D:240-253,255-272,274-282 1fxh d1fxh.1 B:146-160,162-174,174-184 1ryp d1rypj_ J:47-70,74-90,95-106 1k2x d1k2x.2 D:240-253,255-272,274-282 2z3b d2z3bd1 D:55-74,76-92,100-106 1ya7 d1ya7l1 L:48-71,75-91,97-105 1k2x d1k2x.1 B:240-253,255-272,274-282 1kyi d1kyik_ K:49-68,70-84,93-100 3e47 d3e47w1 W:48-71,75-91,96-10B 1z7q d1z7qj1 J:55-78,82-98,103-114 1z7q d1z7qx1 X:55-78,82-98,103-114 2f16 d2f16w1 W:48-71,75-91,96-10B 1gm8 d1gm8.1 B:146-160,162-174,174-184 3d29 d3d29w1 W:48-71,75-91,96-10B 1fxv d1fxv.1 B:146-160,162-174,174-184 1kyi d1kyil_ L:49-68,70-84,93-100 1g65 d1g65h_ H:48-71,75-91,97-105A 1g65 d1g65j_ J:48-71,75-91,96-105B 3d29 d3d29i1 I:48-71,75-91,96-10B 2z3b d2z3bi1 I:55-74,76-92,100-106 1kyi d1kyij_ J:49-68,70-84,93-100 1kec d1kec.1 B:146-160,162-174,174-184 1q19 d1q19d2 D:80-93,93-101,102-111 3bdm d3bdmw1 W:48-71,75-91,96-10B 3bdm d3bdmi1 I:48-71,75-91,96-10B 1ofi d1ofih_ H:49-68,70-84,93-100 2gpl d2gplv1 V:48-71,75-91,97-10A 1g0u d1g0uh_ H:48-71,75-91,97-105A 2gpl d2gplh1 H:48-71,75-91,97-10A 1kyi d1kyih_ H:49-68,70-84,93-100 1ghd d1ghd.1 B:148-159,161-172,175-184 1ya7 d1ya7a1 A:81-104,108-126,134-142 1ofh d1ofhn_ N:49-68,70-86,93-100 1gm9 d1gm9.1 B:146-160,162-174,174-184 2e0x d2e0x.2 D:483-502,504-511,551-560 1ya7 d1ya7b1 B:81-104,108-126,134-142 3d29 d3d29v1 V:48-71,75-91,97-10A 1kyi d1kyig_ G:49-68,70-84,93-100 1e3a d1e3a.1 B:409-423,425-437,437-447 2gpl d2gpli1 I:48-71,75-91,96-10B 1g65 d1g65v_ V:48-71,75-91,97-105A 1q19 d1q19b2 B:80-93,93-101,102-111 1h2g d1h2g.1 B:146-160,162-174,174-184 3d29 d3d29h1 H:48-71,75-91,97-10A 1ofi d1ofin_ N:49-68,70-86,93-100 1kyi d1kyii_ I:49-68,70-84,93-100 2gpl d2gplw1 W:48-71,75-91,96-10B 1jvz d1jvz.1 B:317-328,330-341,344-353 1e94 d1e94c_ C:49-68,70-86,93-100 2fak d2fakq1 Q:81-104,108-126,134-141 1jx9 d1jx9.1 B:146-160,162-174,174-184 1g0u d1g0uq_ Q:81-104,108-126,134-141 1q19 d1q19a2 A:80-93,93-101,102-111 2nlz d2nlzb1 B:440-459,461-468,510-520 2f16 d2f16x1 X:48-71,75-91,96-10B 2z3b d2z3be1 E:55-74,76-92,100-106 3e47 d3e47q1 Q:81-104,108-126,134-141 2fak d2fakc1 C:81-104,108-126,134-141 1jd2 d1jd2q_ Q:48-71,75-91,96-105A 1q15 d1q15a2 A:80-93,93-101,102-111 3e47 d3e47c1 C:81-104,108-126,134-141 2f16 d2f16j1 J:48-71,75-91,96-10B 1ya7 d1ya7e1 E:81-104,108-126,134-142 1jn9 d1jn9.1 B:240-253,255-272,274-282 2gpl d2gplc1 C:81-104,108-126,134-141 1kyi d1kyio_ O:49-68,70-84,93-100 2gpl d2gplq1 Q:81-104,108-126,134-141 2nlz d2nlza1 A:440-459,461-468,510-520 1kyi d1kyim_ M:49-68,70-84,93-100 1t3m d1t3m.2 D:239-252,254-271,273-281 2z3b d2z3bb1 B:55-74,76-92,100-106 1fm2 d1fm2.1 B:317-328,330-341,344-353 1kyi d1kyin_ N:49-68,70-84,93-100 1keh d1keha_ A:317-328,330-341,346-353 1ryp d1rypw_ W:48-71,75-91,96-105 1g65 d1g65q_ Q:81-104,108-126,134-141 1kyi d1kyir_ R:49-68,70-84,93-100 1jxa d1jxac2 C:122-138,140-153,155-163 1gkf d1gkf.1 B:146-160,162-174,174-184 2nlz d2nlzd1 D:440-459,461-468,510-520 1kyi d1kyip_ P:49-68,70-84,93-100 1ofh d1ofhi_ I:49-68,70-84,93-100 2nlz d2nlzc1 C:440-459,461-468,510-520 1gm7 d1gm7.1 B:146-160,162-174,174-184 1g3i d1g3io_ O:49-68,70-84,93-100 1ya7 d1ya7c1 C:81-104,108-126,133-142 1g0u d1g0uc_ C:81-104,108-126,134-141 1hqy d1hqya_ A:49-68,70-86,93-100 1kyi d1kyiq_ Q:49-68,70-84,93-100 1g3i d1g3im_ M:49-68,70-84,93-100 1iru d1irum_ M:57-80,84-100,106-115 1ht2 d1ht2b_ B:49-68,70-86,93-100 1jjw d1jjwa_ A:49-68,70-86,93-100 1ht2 d1ht2l_ L:49-68,70-86,93-100 1iru d1iru1_ 1:57-80,84-100,106-115 2zcy d2zcyq1 Q:81-104,108-126,134-141 1g3i d1g3ir_ R:49-68,70-84,93-100 1g3i d1g3ip_ P:49-68,70-84,93-100 1g3i d1g3iq_ Q:49-68,70-84,93-100 1t3m d1t3m.1 B:239-252,254-271,273-281 1ya7 d1ya7d1 D:81-104,108-126,134-142 2zcy d2zcyc1 C:81-104,108-126,134-141 3d29 d3d29q1 Q:81-104,108-126,134-141 3d29 d3d29c1 C:81-104,108-126,134-141 1ajq d1ajq.1 B:146-160,162-174,174-184 2f16 d2f16q1 Q:81-104,108-126,134-141 2f16 d2f16c1 C:81-104,108-126,134-141 1ryp d1rypi_ I:48-71,75-91,96-105 2f16 d2f16h1 H:48-71,75-91,97-10A 1g65 d1g65c_ C:81-104,108-126,134-141 1gk9 d1gk9.1 B:146-160,162-174,174-184 1ai7 d1ai7.1 B:146-160,162-174,174-184 3bdm d3bdmv1 V:48-71,75-91,97-10A 1jd2 d1jd2x_ X:81-104,108-126,134-141 2f16 d2f16v1 V:48-71,75-91,97-10A 3bdm d3bdmh1 H:48-71,75-91,97-10A 1ea0 d1ea0a3 A:272-288,290-300,329-338 2vdc d2vdcc3 C:272-288,290-300,329-338 2vdc d2vdca3 A:272-288,290-300,329-338 2vdc d2vdce3 E:272-288,290-300,329-338 3e47 d3e47a1 A:81-104,108-126,134-142 1ai6 d1ai6.1 B:146-160,162-174,174-184 3e47 d3e47o1 O:81-104,108-126,134-142 1ht1 d1ht1a_ A:49-68,70-86,93-100 1ai5 d1ai5.1 B:146-160,162-174,174-184 1pnm d1pnm.1 B:146-160,162-174,174-184 1lm1 d1lm1a3 A:269-285,287-297,327-337 1pnl d1pnl.1 B:146-160,162-174,174-184 1pnk d1pnk.1 B:146-160,162-174,174-184 1ht1 d1ht1b_ B:49-68,70-86,93-100 1g3k d1g3ka_ A:49-68,70-86,93-100 1ajp d1ajp.1 B:146-160,162-174,174-184 1e94 d1e94d_ D:49-68,70-86,93-100 1ht1 d1ht1x_ X:49-68,70-86,93-100 1te5 d1te5a_ A:128-146,150-169,168-178 1z7q d1z7qy1 Y:49-72,76-94,99-110 1z7q d1z7qk1 K:49-72,76-94,99-110 1ht1 d1ht1d_ D:49-68,70-86,93-100 1z7q d1z7qi1 I:48-71,75-91,96-105 1z7q d1z7qw1 W:48-71,75-91,96-105 1ajn d1ajn.1 B:146-160,162-174,174-184 1ai4 d1ai4.1 B:146-160,162-174,174-184 1g65 d1g65i_ I:48-71,75-91,97-105B 1ofh d1ofhg_ G:49-68,70-84,93-100 2fak d2fakv1 V:48-71,75-91,97-10A 3bdm d3bdmq1 Q:81-104,108-126,134-141 3bdm d3bdmc1 C:81-104,108-126,134-141 2f16 d2f16a1 A:81-104,108-126,134-142 1ht2 d1ht2k_ K:49-68,70-86,93-100 1g0u d1g0uo_ O:81-104,108-126,134-142 2fak d2fakh1 H:48-71,75-91,97-10A 1llw d1llwa3 A:269-285,287-297,327-337 2fak d2faku1 U:81-104,108-126,134-142 2f16 d2f16o1 O:81-104,108-126,134-142 3e47 d3e47u1 U:81-104,108-126,134-142 1ryp d1rypo_ O:86-109,113-131,139-147 2fak d2faka1 A:81-104,108-126,134-142 3bdm d3bdmo1 O:81-104,108-126,134-142 1j2q d1j2qf_ F:81-104,108-126,134-142 2fak d2fakg1 G:81-104,108-126,134-142 1jd2 d1jd2v_ V:81-104,108-126,134-142 2zcy d2zcya1 A:81-104,108-126,134-142 3bdm d3bdma1 A:81-104,108-126,134-142 1ofd d1ofda3 A:269-285,287-297,327-337 2fak d2fako1 O:81-104,108-126,134-142 1ned d1nedc_ C:48-67,75-92,97-104 3e47 d3e47g1 G:81-104,108-126,134-142 1g65 d1g65w_ W:48-71,75-91,97-105B 2zcy d2zcyo1 O:81-104,108-126,134-142 1j2q d1j2qa_ A:81-104,108-126,134-142 1jd2 d1jd2a_ A:81-104,108-126,134-142 1g3i d1g3ig_ G:49-68,70-84,93-100 1ryp d1rype_ E:81-104,108-123,140-148 1jd2 d1jd2c_ C:81-104,108-126,134-141 1ht2 d1ht2c_ C:49-68,70-86,93-100 2f16 d2f16u1 U:81-104,108-126,134-142 2f16 d2f16g1 G:81-104,108-126,134-142 2gpl d2gpla1 A:81-104,108-126,134-142 1j2q d1j2qg_ G:81-104,108-126,134-142 1j2q d1j2qc_ C:81-104,108-126,134-142 1j2q d1j2qd_ D:81-104,108-126,134-142 2gpl d2gplo1 O:81-104,108-126,134-142 2gpl d2gplu1 U:81-104,108-126,134-142 3d29 d3d29g1 G:81-104,108-126,134-142 2gpl d2gplg1 G:81-104,108-126,134-142 1ht1 d1ht1v_ V:49-68,70-86,93-100 1iru d1irua_ A:83-106,110-128,136-144 1j2q d1j2qb_ B:81-104,108-126,134-142 1ofd d1ofdb3 B:269-285,287-297,327-337 1llz d1llza3 A:269-285,287-297,327-337 1j2q d1j2qe_ E:81-104,108-126,134-142 2zcy d2zcyu1 U:81-104,108-126,134-142 3d29 d3d29u1 U:81-104,108-126,134-142 1iru d1iruo_ O:83-106,110-128,136-144 2zcy d2zcyg1 G:81-104,108-126,134-142 1ryp d1ryps_ S:81-104,108-123,140-148 1jd2 d1jd2p_ P:48-71,75-91,97-105 1ryp d1rypp_ P:78-102,106-124,132-140 1g0u d1g0ua_ A:81-104,108-126,134-142 1g0u d1g0ui_ I:48-71,75-91,97-105A 1ofh d1ofhm_ M:49-68,70-86,93-100 1ofe d1ofeb3 B:269-285,287-297,327-337 2zcy d2zcyi1 I:48-71,75-91,97-10B 1hqy d1hqyc_ C:49-68,70-86,93-100 1ryp d1rypb_ B:78-102,106-124,132-140 1te5 d1te5b_ B:128-146,150-169,169-178 2zcy d2zcyw1 W:48-71,75-91,97-10B 3d29 d3d29o1 O:81-104,108-126,134-142 1ryp d1rypc_ C:80-103,107-125,133-141 1ht2 d1ht2d_ D:49-68,70-86,93-100 3d29 d3d29a1 A:81-104,108-126,134-142 3bdm d3bdmu1 U:81-104,108-126,134-142 3bdm d3bdmg1 G:81-104,108-126,134-142 2gpl d2gplp1 P:81-104,108-126,134-142 1ryp d1rypq_ Q:80-103,107-125,133-141 2gpl d2gplb1 B:81-104,108-126,134-142 2fak d2fakw1 W:48-71,75-91,97-10B 1g65 d1g65p_ P:81-104,108-126,133-142 2fak d2faki1 I:48-71,75-91,97-10B 2fak d2fakd1 D:81-104,108-123,134-142 1hqy d1hqyd_ D:49-68,70-86,93-100 1jd2 d1jd22_ 2:81-104,108-126,134-142 2zcy d2zcyb1 B:81-104,108-126,134-142 1iru d1iruy_ Y:49-72,76-94,99-109 1g0u d1g0uw_ W:48-71,75-91,97-105A 2zcy d2zcyp1 P:81-104,108-126,134-142 2f16 d2f16i1 I:48-71,75-91,97-10B 1iru d1iruk_ K:49-72,76-94,99-109 2f16 d2f16d1 D:81-104,108-123,134-142 3e47 d3e47i1 I:48-71,75-91,97-10B 1ofh d1ofhl_ L:49-68,70-86,93-100 2f16 d2f16r1 R:81-104,108-123,134-142 3e47 d3e47b1 B:81-104,108-126,133-142 2fak d2fakp1 P:81-104,108-126,134-142 2gpl d2gpld1 D:81-104,108-123,134-142 2fak d2fakb1 B:81-104,108-126,134-142 2gpl d2gplr1 R:81-104,108-123,134-142 3e47 d3e47p1 P:81-104,108-126,134-142 1g0u d1g0ub_ B:81-104,108-126,134-142 1g0u d1g0up_ P:81-104,108-126,134-142 3d29 d3d29p1 P:81-104,108-126,134-142 1ao0 d1ao0d2 D:126-138,142-155,155-165 1g65 d1g65o_ O:81-104,108-126,134-142 2i3o d2i3ob1 B:19-33,35-52,511-516 1g65 d1g65a_ A:81-104,108-126,134-142 1ao0 d1ao0b2 B:126-138,142-155,155-165 2nqo d2nqo.1 B:472-491,493-500,541-552 3d29 d3d29b1 B:81-104,108-126,133-142 3bdm d3bdmb1 B:81-104,108-126,133-142 1ao0 d1ao0c2 C:126-138,142-155,155-165 1jd2 d1jd2y_ Y:81-104,108-123,134-142 1jd2 d1jd2w_ W:81-104,108-126,134-142 3bdm d3bdmp1 P:81-104,108-126,133-142 1ao0 d1ao0a2 A:126-138,142-155,155-165 1p4k d1p4kc_ C:311-323,330-346,452-460 2i3o d2i3od1 D:19-33,35-52,511-516 1gph d1gph32 3:126-138,142-155,155-165 1ofe d1ofea3 A:269-285,287-297,327-336 1g0u d1g0ur_ R:81-104,108-123,134-142 1jd2 d1jd2b_ B:81-104,108-126,134-142 1gph d1gph12 1:126-139,142-155,155-165 1g65 d1g65b_ B:81-104,108-126,134-142 9gaa d9gaaa_ A:11-23,30-46,152-160 1z7q d1z7qa1 A:86-109,113-132,139-147 1z7q d1z7qo1 O:86-109,113-132,139-147 2i3o d2i3oa1 A:19-33,35-52,511-516 1ht1 d1ht1c_ C:49-68,70-86,93-100 1g3i d1g3ih_ H:49-68,70-85,93-100 1j2p d1j2pa_ A:81-104,108-126,134-142 1j2p d1j2pc_ C:81-104,108-126,134-142 9gac d9gaca_ A:11-23,30-46,152-160 1ofi d1ofim_ M:49-68,70-86,93-100 1j2p d1j2pf_ F:81-104,108-126,133-142 2i3o d2i3oc1 C:19-33,35-52,511-516 1j2p d1j2pe_ E:81-104,108-126,134-142 1j2p d1j2pb_ B:81-104,108-126,133-142 1j2p d1j2pg_ G:81-104,108-126,134-142 1ct9 d1ct9a2 A:97-110,109-118,122-129 1j2p d1j2pd_ D:81-104,108-126,133-142 9gac d9gacc_ C:311-323,330-346,452-460 1z7q d1z7qs1 S:81-104,108-123,140-148 1z7q d1z7qe1 E:81-104,108-123,140-148 9gaa d9gaac_ C:311-323,330-346,452-460 2e0w d2e0wa1 A:483-502,504-511,552-560 1cp9 d1cp9.1 B:146-160,162-174,174-184 1pma d1pmac_ C:81-104,108-126,134-143 2f16 d2f16p1 P:81-104,108-127,133-142 2f16 d2f16b1 B:81-104,108-127,133-142 1k2x d1k2x.1 B:232-240,255-272,274-282 1jn9 d1jn9.2 D:232-240,255-272,274-282 1ofi d1ofil_ L:49-68,70-86,93-100 1t3m d1t3m.2 D:231-239,254-271,273-281 1t3m d1t3m.1 B:231-239,254-271,273-281 1k2x d1k2x.2 D:232-240,255-272,274-282 1g3i d1g3ij_ J:49-68,70-85,93-100 1ya7 d1ya7f1 F:81-104,108-126,133-143 1ct9 d1ct9c2 C:97-110,109-118,122-129 1jn9 d1jn9.1 B:232-240,255-272,274-282 1z7q d1z7qq1 Q:80-103,107-125,133-141 1z7q d1z7qc1 C:80-103,107-125,133-141 1pma d1pmag_ G:81-104,108-126,134-143 1p4v d1p4vc_ C:311-328,330-346,452-460 1pma d1pmae_ E:81-104,108-126,134-143 1p4k d1p4ka_ A:11-28,30-46,152-160 1apz d1apz.2 D:236-244,258-275,278-286 1p4v d1p4va_ A:11-28,30-46,152-160 1ofi d1ofii_ I:49-68,70-85,93-100 1z7q d1z7qt1 T:77-100,104-122,130-138 1z7q d1z7qf1 F:77-100,104-122,130-138 1iru d1iruc_ C:79-102,106-125,131-140 1iru d1iruq_ Q:79-102,106-125,131-140 9gaf d9gafa_ A:11-28,30-46,152-160 1apz d1apz.1 B:236-244,258-275,278-286 9gaf d9gafc_ C:311-328,330-346,452-460 1g4a d1g4ab_ B:49-61,69-83,93-100 1ya7 d1ya7g1 G:81-104,108-126,134-143 1iru d1irub_ B:78-101,105-123,131-140 1iru d1irup_ P:78-101,105-123,131-140 1yau d1yaue1 E:81-104,108-127,134-142 1apy d1apy.1 B:236-244,258-275,278-286 1ofi d1ofig_ G:49-68,70-85,93-100 1yau d1yaua1 A:81-104,108-127,134-142 1ayy d1ayy.2 D:213-225,227-247,255-262 1yar d1yara1 A:81-104,108-127,134-142 1apy d1apy.2 D:236-244,258-275,278-286 1yar d1yare1 E:81-104,108-127,134-142 1yar d1yarg1 G:81-104,108-127,134-142 1yar d1yarb1 B:81-104,108-127,134-142 1ryp d1rypa_ A:86-109,113-132,139-147 1ecb d1ecba2 A:126-143,148-164,164-174 1g65 d1g65u_ U:81-104,108-127,134-142 1g65 d1g65g_ G:81-104,108-127,134-142 1ecc d1eccb2 B:126-143,148-164,164-174 1ecj d1ecja2 A:126-143,148-164,164-174 1ea0 d1ea0a3 A:82-101,140-163,167-174 1ecj d1ecjd2 D:126-143,148-164,164-174 2vdc d2vdce3 E:82-101,140-163,167-174 2vdc d2vdcc3 C:82-101,140-163,167-174 1ecb d1ecbb2 B:126-143,148-164,164-174 2vdc d2vdca3 A:82-101,140-163,167-174 1jd2 d1jd2g_ G:81-104,108-127,134-142 1ecj d1ecjc2 C:126-143,148-164,164-174 1ecj d1ecjb2 B:126-143,148-164,164-174 1g0u d1g0uu_ U:81-104,108-127,134-142 1iru d1irug_ G:80-103,107-125,133-141 1iru d1iruu_ U:80-103,107-125,133-141 1g0u d1g0ug_ G:81-104,108-127,134-142 1iru d1irur_ R:76-99,103-121,129-138 1iru d1irud_ D:76-99,103-121,129-138 1ecb d1ecbc2 C:126-143,148-164,164-174 1ecb d1ecbd2 D:126-143,148-164,164-174 1lm1 d1lm1a3 A:82-101,140-159,163-170 2vdc d2vdcd3 D:82-101,140-163,167-174 2vdc d2vdcf3 F:82-101,140-163,167-174 2vdc d2vdcb3 B:82-101,140-163,167-174 1ea0 d1ea0b3 B:82-101,140-163,167-174 9gaa d9gaaa_ A:213-225,227-247,254-262 2gaw d2gaw.2 D:213-225,227-247,254-262 1ecf d1ecfb2 B:126-142,148-164,164-174 1ecg d1ecgb2 B:126-142,148-164,164-174 1llw d1llwa3 A:82-101,140-159,163-170 2gac d2gac.2 D:213-225,227-247,254-262 2gaw d2gaw.1 B:213-225,227-247,254-262 1ecg d1ecga2 A:126-142,148-164,164-174 9gaa d9gaac_ C:513-525,527-547,554-562 1ryp d1rypf_ F:77-100,104-122,130-139 9gac d9gacc_ C:513-525,527-547,555-562 1ecf d1ecfa2 A:126-142,148-164,164-174 9gaf d9gafc_ C:513-525,527-547,555-562 1ryp d1rypt_ T:77-100,104-122,130-139 2gac d2gac.1 B:213-225,227-247,254-262 1ct9 d1ct9a2 A:97-110,109-118,177-182 9gaf d9gafa_ A:213-225,227-247,255-262 3e47 d3e47e1 E:81-104,108-126,134-143 3e47 d3e47s1 S:81-104,108-126,134-143 1gph d1gph22 2:126-138,142-154,155-165 1p4k d1p4ka_ A:213-225,227-247,254-262 1p4v d1p4va_ A:213-225,227-247,254-262 9gac d9gaca_ A:213-225,227-247,254-262 1g65 d1g65s_ S:81-104,108-126,134-143 1ecc d1ecca2 A:126-143,148-163,164-174 2fak d2fake1 E:81-104,108-126,134-143 2f16 d2f16e1 E:81-104,108-126,134-143 2fak d2faks1 S:81-104,108-126,134-143 2gpl d2gple1 E:81-104,108-126,134-143 1gph d1gph42 4:126-138,142-154,155-165 2gpl d2gpls1 S:81-104,108-126,134-143 2f16 d2f16s1 S:81-104,108-126,134-143 1g65 d1g65e_ E:81-104,108-126,134-143 1z7q d1z7qb1 B:78-102,106-125,132-140 1z7q d1z7qp1 P:78-102,106-125,132-140 1z7q d1z7qd1 D:78-101,105-124,131-138 1z7q d1z7qr1 R:78-101,105-124,131-138 3bdm d3bdme1 E:81-104,108-126,134-143 1ofd d1ofda3 A:82-101,140-159,163-170 3bdm d3bdms1 S:81-104,108-126,134-143 1g0u d1g0us_ S:81-104,108-126,134-143 1ofd d1ofdb3 B:82-101,140-159,163-170 1g0u d1g0ue_ E:81-104,108-126,134-143 3d29 d3d29e1 E:81-104,108-126,134-143 3d29 d3d29s1 S:81-104,108-126,134-143 1p4k d1p4kc_ C:513-525,527-547,554-562 1p4v d1p4vc_ C:513-525,527-547,554-562 1llz d1llza3 A:82-101,140-159,163-169 1jd2 d1jd2z_ Z:81-104,108-126,134-143 1yau d1yaub1 B:81-104,108-127,134-143 1iru d1irut_ T:77-100,104-122,130-139 1iru d1iruf_ F:77-100,104-122,130-139 1ofe d1ofea3 A:82-101,140-159,163-170 1jd2 d1jd2e_ E:81-104,108-126,134-143 1yau d1yauf1 F:81-104,108-127,134-143 1yau d1yauc1 C:81-104,108-127,134-143 1ofe d1ofeb3 B:82-101,140-159,163-170 1yau d1yaug1 G:81-104,108-127,133-143 1ayy d1ayy.1 B:213-225,227-247,254-262 1yau d1yaud1 D:81-104,108-127,133-143 3d29 d3d2911 1:48-70,75-92B,97-10A 2gpl d2gplm1 M:48-70,75-92B,97-10A 1g65 d1g65f_ F:81-104,108-127,134-143 1g65 d1g65t_ T:81-104,108-127,134-143 1ryp d1rypg_ G:80-103,107-126,133-142 2zcy d2zcym1 M:49-68,75-92B,96-10A 2zcy d2zcy01 0:49-68,75-92B,96-10A 2zcy d2zcyf1 F:81-104,108-127,134-143 2zcy d2zcyt1 T:81-104,108-127,134-143 2fak d2fakf1 F:81-104,108-127,134-143 3d29 d3d29f1 F:81-104,108-127,134-143 1ryp d1rypu_ U:80-103,107-126,133-142 2fak d2fakt1 T:81-104,108-127,134-143 1ofi d1ofih_ H:49-68,70-84,110-114 3d29 d3d29t1 T:81-104,108-127,134-143 1g3i d1g3ii_ I:49-68,70-84,110-114 3bdm d3bdmf1 F:81-104,108-127,134-143 1g3i d1g3ik_ K:49-68,70-84,110-114 1g3i d1g3ig_ G:49-68,70-84,110-114 3bdm d3bdmt1 T:81-104,108-127,134-143 1g3i d1g3il_ L:49-68,70-84,110-114 1kyi d1kyii_ I:49-68,70-84,110-114 2gpl d2gplf1 F:81-104,108-127,133-143 2gpl d2gplt1 T:81-104,108-127,133-143 1ofh d1ofhi_ I:49-68,70-84,110-114 1kyi d1kyik_ K:49-68,70-84,110-114 1ofh d1ofhh_ H:49-68,70-84,110-114 3e47 d3e47f1 F:81-104,108-127,134-143 1kyi d1kyil_ L:49-68,70-84,110-114 3e47 d3e47t1 T:81-104,108-127,134-143 2f16 d2f16t1 T:81-104,108-127,133-143 1kyi d1kyij_ J:49-68,70-84,110-114 1g3i d1g3ih_ H:49-68,70-85,110-114 1ofi d1ofii_ I:49-68,70-85,110-114 1g3i d1g3ij_ J:49-68,70-85,110-114 1jd2 d1jd2f_ F:81-104,108-127,133-143 2f16 d2f16f1 F:81-104,108-127,133-143 1kyi d1kyih_ H:49-68,70-84,110-114 1ofi d1ofig_ G:49-68,70-85,110-114 2zcy d2zcye1 E:81-104,108-127,134-143 1g0u d1g0uf_ F:81-104,108-127,133-143 2zcy d2zcys1 S:81-104,108-127,134-143 1kyi d1kyig_ G:49-68,70-84,110-114 1g0u d1g0ut_ T:81-104,108-127,133-143 1kyi d1kyin_ N:49-68,70-84,110-114 1kyi d1kyir_ R:49-68,70-84,110-114 1kyi d1kyio_ O:49-68,70-84,110-114 1kyi d1kyim_ M:49-68,70-84,110-114 1kyi d1kyiq_ Q:49-68,70-84,110-114 9gaa d9gaaa_ A:205-213,227-247,254-262 1kyi d1kyip_ P:49-68,70-84,110-114 1jd2 d1jd21_ 1:81-104,108-127,133-143 1g3i d1g3ir_ R:49-68,70-84,110-114 1g0u d1g0um_ M:49-70,75-92B,96-105A 9gaa d9gaac_ C:505-513,527-547,554-562 9gac d9gaca_ A:205-213,227-247,254-262 3e47 d3e4711 1:49-70,75-92B,96-10A 3e47 d3e47m1 M:49-70,75-92B,96-10A 2gac d2gac.2 D:205-213,227-247,254-262 1g0u d1g0u1_ 1:49-70,75-92B,96-105A 2gaw d2gaw.2 D:205-213,227-247,254-262 2gac d2gac.1 B:205-213,227-247,254-262 1p4k d1p4ka_ A:205-213,227-247,254-262 2gaw d2gaw.1 B:205-213,227-247,254-262 2fak d2fak11 1:49-70,75-92B,96-10A 2fak d2fakm1 M:49-70,75-92B,96-10A 1p4v d1p4vc_ C:505-513,527-547,554-562 1jd2 d1jd2m_ M:49-70,75-92B,96-105A 1p4v d1p4va_ A:205-213,227-247,254-262 1z7q d1z7qg1 G:80-103,107-126,133-142 1ryp d1rypn_ N:49-70,80-99,103-113 3bdm d3bdm01 0:49-70,75-92B,96-10A 1z7q d1z7qu1 U:80-103,107-126,133-142 1ryp d1ryp2_ 2:49-70,80-99,103-113 3bdm d3bdmm1 M:49-70,75-92B,96-10A 1g65 d1g65m_ M:49-70,75-92B,96-105A 2f16 d2f1611 1:49-70,75-92B,96-10A 2gpl d2gpl11 1:49-70,75-92B,96-10A 2f16 d2f16m1 M:49-70,75-92B,96-10A 1g65 d1g651_ 1:49-70,75-92B,96-105A 1p4k d1p4kc_ C:505-513,527-547,554-562 1jd2 d1jd2t_ T:49-70,75-92B,96-105A 3d29 d3d29m1 M:49-70,75-92B,96-10A 1ayy d1ayy.1 B:205-213,227-247,254-262 9gaf d9gafc_ C:505-513,527-547,555-562 9gaf d9gafa_ A:205-213,227-247,255-262 1z7q d1z7qn1 N:57-78,88-107,111-121 9gac d9gacc_ C:505-513,527-547,555-562 1iru d1iru2_ 2:57-78,84-103,107-117 1iru d1irun_ N:57-78,84-103,107-117 1ayy d1ayy.2 D:205-213,227-247,255-262 4. d.153.2 Archaeal IMP cyclohydrolase PurO has a putative active site in the same topological location as the Ntn hydrolase but lacks the N-terminal nucleophile ! Ntn hydrolase-like 4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing 2ntm d2ntmd1 D:74-87,89-102,111-119 2ntl d2ntla1 A:74-87,89-102,111-119 2ntl d2ntlc1 C:74-87,89-102,111-119 2ntl d2ntld1 D:74-87,89-102,111-119 2ntl d2ntlb1 B:74-87,89-102,111-119 2ntk d2ntkb1 B:74-87,89-102,111-119 2ntk d2ntkc1 C:74-87,89-102,111-119 2ntk d2ntka1 A:74-87,89-102,111-119 2ntk d2ntkd1 D:74-87,89-102,111-119 2ntm d2ntmb1 B:74-87,89-102,111-119 1kuu d1kuua_ A:74-87,89-102,111-119 2ntm d2ntmc1 C:74-87,89-102,111-119 2ntm d2ntma1 A:74-87,89-102,111-119 5. e.51.1 Urocanase Urocanase 3 domains; d1: alpha+beta [alpha(2)-beta(3); mixed sheet: 213]; d2: alpha/beta of the NAD(P)-binding Rossmann-fold superfamily (scop_sf 51735, most similar to scop_fa 51883 and scop_fa 51736); d3: alpha+beta of the glutamine synthetase/guanido kinase fold (scop_cf 55930); d1 and d3 form a single beta-sheet 1x87 d1x87b_ B:135-157,382-397,402-409 1x87 d1x87a_ A:135-157,382-397,402-408 1w1u d1w1ua_ A:369-385,414-432,436-443 1w1u d1w1ub_ B:369-385,414-432,436-443 1x87 d1x87b_ B:364-380,409-427,431-438 1uwk d1uwka_ A:369-385,414-432,436-443 1uwl d1uwla_ A:369-385,414-432,436-443 1uwk d1uwkb_ B:369-385,414-432,436-443 1uwl d1uwlb_ B:369-385,414-432,436-443 1uwk d1uwka_ A:140-162,387-402,407-414 1x87 d1x87a_ A:364-380,409-427,431-439 1w1u d1w1ua_ A:140-162,387-402,407-414 1uwk d1uwkb_ B:140-162,387-401,407-414 1uwl d1uwla_ A:140-162,387-401,407-414 1uwl d1uwlb_ B:140-162,387-401,407-414 1w1u d1w1ub_ B:140-162,387-401,407-414 6. e.7.1 Carbohydrate phosphatase Carbohydrate phosphatase N-terminal domain is an alpha+beta, C-terminal domain is an alpha/beta with mixed beta-sheet 1spi d1spia_ A:38-60,82-99,123-130 1spi d1spid_ D:36-60,83-99,123-130 1fpg d1fpgb_ B:28-50,72-89,112-122 1fpf d1fpfb_ B:28-50,72-89,112-122 1rdz d1rdza_ A:28-50,72-89,112-122 1fpe d1fpeb_ B:28-50,72-89,112-122 1fpd d1fpdb_ B:28-50,72-89,112-122 1rdy d1rdyb_ B:28-50,72-89,112-122 1fsa d1fsaa_ A:28-50,72-89,112-122 1fpl d1fpla_ A:28-50,72-89,112-122 1fpl d1fplb_ B:28-50,72-89,112-122 1fbe d1fbeb_ B:28-51,72-89,112-122 1fpi d1fpia_ A:28-50,72-89,112-122 1fpi d1fpib_ B:28-50,72-89,112-122 1ima d1imaa_ A:5-30,44-63,82-94 1fpj d1fpja_ A:28-50,72-89,112-122 1rdz d1rdzb_ B:28-50,72-89,112-122 2hhm d2hhma_ A:5-30,44-63,82-94 1vdw d1vdwb_ B:5-22,44-62,78-88 1fsa d1fsab_ B:28-50,72-89,112-122 1awb d1awbb_ B:5-30,44-63,82-94 1fpk d1fpkb_ B:28-51,72-89,112-122 1fbd d1fbdb_ B:28-51,72-89,112-122 1ima d1imab_ B:5-30,44-63,82-94 1ime d1imeb_ B:5-30,44-63,82-94 1lbw d1lbwb_ B:302-325,343-361,377-386 1imb d1imbb_ B:5-30,44-63,82-94 1imc d1imca_ A:5-30,44-63,85-94 1q9d d1q9da_ A:28-50,72-89,112-122 2hhm d2hhmb_ B:5-30,44-63,82-94 1lbx d1lbxb_ B:302-325,343-361,377-386 2qvu d2qvub1 B:28-50,72-89,112-122 1imc d1imcb_ B:5-30,44-63,82-94 1lbv d1lbvb_ B:302-325,343-361,377-386 1imd d1imdb_ B:5-30,44-63,82-94 2qvv d2qvvb1 B:28-50,72-89,112-122 1imf d1imfa_ A:5-29,41-63,82-94 5fbp d5fbpa_ A:28-51,72-89,112-120 1lev d1levf_ F:28-51,72-89,112-122 1fta d1ftaa_ A:28-50,72-89,112-122 1fta d1ftac_ C:28-50,72-89,112-122 1fpe d1fpea_ A:27-50,72-89,112-122 1fpb d1fpbb_ B:27-51,72-89,112-122 1awb d1awba_ A:5-30,44-63,82-94 1ka0 d1ka0a_ A:3-25,46-65,134-146 1fbd d1fbda_ A:28-51,72-89,112-122 1fpk d1fpka_ A:28-51,72-89,112-122 1fpg d1fpga_ A:27-50,72-89,112-122 4fbp d4fbpd_ D:27-50,72-89,112-122 1fbc d1fbca_ A:28-51,72-89,112-120 1rdy d1rdya_ A:27-50,72-89,112-122 1fbg d1fbga_ A:28-51,72-89,112-122 1fpf d1fpfa_ A:27-50,72-89,112-122 1k9z d1k9za_ A:3-25,46-65,134-146 1ime d1imea_ A:5-30,44-63,82-94 1fpj d1fpjb_ B:27-50,72-89,112-122 1ka1 d1ka1a_ A:3-25,46-65,134-146 1fpd d1fpda_ A:27-50,72-89,112-122 1q9d d1q9db_ B:28-50,72-89,112-122 1qgx d1qgxa_ A:3-25,46-65,134-146 1lbz d1lbzb_ B:302-325,343-361,377-386 1rdx d1rdxa_ A:28-53,71-89,112-119 1fbf d1fbfb_ B:27-51,72-89,112-122 1fbf d1fbfa_ A:28-51,72-89,112-122 1bk4 d1bk4a_ A:28-51,72-89,112-122 1k9y d1k9ya_ A:3-25,46-65,134-146 1fbg d1fbgb_ B:28-51,72-89,112-122 4fbp d4fbpb_ B:27-50,72-89,112-122 1fbe d1fbea_ A:28-51,72-89,112-122 1fta d1ftab_ B:27-50,72-89,112-122 4fbp d4fbpa_ A:27-50,72-89,112-122 1eyk d1eyka_ A:27-50,72-89,112-122 1nv7 d1nv7b_ B:2027-2050,2072-2089,2112-2122 1fj9 d1fj9a_ A:27-50,72-89,112-122 1nv7 d1nv7a_ A:1027-1050,1072-1089,1112-1122 1nv6 d1nv6a_ A:1028-1051,1071-1089,1112-1122 1rdx d1rdxb_ B:27-51,71-89,112-118 1frp d1frpa_ A:27-50,72-89,112-122 1fbc d1fbcb_ B:27-51,72-89,112-122 1eyj d1eyjb_ B:27-50,72-89,112-122 5fbp d5fbpb_ B:27-51,72-89,112-122 1fpb d1fpba_ A:28-51,72-89,112-122 1frp d1frpb_ B:27-50,72-89,112-122 1kz8 d1kz8f_ F:27-50,72-89,112-122 1kz8 d1kz8a_ A:27-50,72-89,112-122 2fbp d2fbpa_ A:28-51,71-89,112-122 1nv1 d1nv1a_ A:1028-1051,1071-1089,1112-1122 1nv5 d1nv5a_ A:1028-1051,1071-1089,1112-1122 2f3h d2f3hb1 B:27-50,72-89,112-122 1nv2 d1nv2a_ A:1028-1051,1071-1089,1112-1122 2qvu d2qvua1 A:27-50,72-89,112-122 4fbp d4fbpc_ C:27-50,72-89,112-122 1nv4 d1nv4a_ A:1028-1051,1071-1089,1112-1122 1nux d1nuxa_ A:1028-1051,1071-1089,1112-1122 2f3b d2f3ba1 A:28-51,71-89,112-122 1eyk d1eykb_ B:27-50,72-89,112-122 1spi d1spib_ B:37-60,82-99,102-107 2qvv d2qvva1 A:27-50,72-89,112-122 1nuy d1nuya_ A:1028-1051,1071-1089,1112-1122 1nv3 d1nv3a_ A:1028-1051,1071-1089,1112-1122 1nuz d1nuza_ A:1028-1051,1071-1089,1112-1122 1spi d1spic_ C:38-60,82-98,122-131 1lev d1leva_ A:27-51,72-89,112-122 1eyj d1eyja_ A:27-50,72-89,112-122 1fj9 d1fj9b_ B:27-50,72-89,112-122 1fj6 d1fj6a_ A:28-51,71-89,112-122 1nv0 d1nv0a_ A:1028-1051,1071-1089,1112-1122 1jp4 d1jp4a_ A:6-33,48-67,112-121 1rdy d1rdyb_ B:28-50,72-89,91-97 1eyi d1eyia_ A:28-51,71-89,112-122 1cnq d1cnqa_ A:28-51,71-89,112-122 3fbp d3fbpb_ B:28-51,71-89,112-122 1lbw d1lbwa_ A:2-25,43-61,76-86 1imb d1imba_ A:5-30,44-63,83-94 1imd d1imda_ A:5-30,44-63,84-94 2fbp d2fbpb_ B:27-51,71-89,112-122 1fsa d1fsaa_ A:28-50,72-89,90-97 1nuy d1nuya_ A:1028-1051,1071-1089,1090-1097 3fbp d3fbpa_ A:27-51,71-89,112-122 1bk4 d1bk4a_ A:28-51,72-89,90-97 1nux d1nuxa_ A:1028-1051,1071-1089,1090-1097 5fbp d5fbpa_ A:28-51,72-89,90-97 1spi d1spib_ B:37-60,82-99,122-131 1nuw d1nuwa_ A:1027-1051,1071-1089,1112-1122 1g0h d1g0ha_ A:2-22,41-59,75-85 1fta d1ftad_ D:27-50,71-89,112-122 1lbv d1lbva_ A:2-25,43-61,76-86 1nuz d1nuza_ A:1028-1051,1071-1089,1090-1097 1nv4 d1nv4a_ A:1028-1051,1071-1089,1090-1097 1nv3 d1nv3a_ A:1028-1051,1071-1089,1090-1097 1nv0 d1nv0a_ A:1028-1051,1071-1089,1090-1097 2f3d d2f3da1 A:27-51,71-89,112-122 1cnq d1cnqa_ A:28-51,71-89,90-97 1lbz d1lbza_ A:2-25,43-61,76-86 1fbh d1fbha_ A:28-51,68-89,112-120 1xi6 d1xi6a_ A:2-22,44-62,78-88 1lby d1lbya_ A:2-25,43-61,76-86 1fbh d1fbhb_ B:27-51,68-89,112-122 1dbz d1dbzb_ B:35-59,76-97,121-128 1dcu d1dcua_ A:35-59,76-97,121-128 1dk4 d1dk4a_ A:2-22,41-59,75-85 1g0h d1g0hb_ B:302-322,341-359,375-385 2f3d d2f3da1 A:27-51,71-89,91-97 1dk4 d1dk4b_ B:302-322,341-359,375-385 1g0i d1g0ia_ A:2-22,41-59,75-85 1vdw d1vdwa_ A:2-27,44-62,78-88 3fbp d3fbpb_ B:28-51,71-89,90-97 1d9q d1d9qd_ D:35-59,76-97,121-128 1fbp d1fbpb_ B:28-51,68-89,112-122 1rdy d1rdya_ A:27-50,72-89,90-97 2f3h d2f3ha1 A:27-50,71-89,112-122 1lbx d1lbxa_ A:2-25,43-61,76-86 1lbx d1lbxb_ B:302-325,343-361,361-366 1fbp d1fbpa_ A:27-51,68-89,112-122 1rdx d1rdxa_ A:28-53,71-89,92-96 3fbp d3fbpa_ A:27-51,71-89,90-97 1dcu d1dcub_ B:35-59,77-97,120-128 1g0i d1g0ib_ B:302-322,341-356,375-385 1dcu d1dcud_ D:35-59,77-97,120-128 1lby d1lbyb_ B:302-325,343-358,377-386 1ni9 d1ni9a_ A:2-27,28-48,76-89 1d9q d1d9qa_ A:35-59,76-97,120-128 1d9q d1d9qb_ B:35-59,76-97,120-128 1dbz d1dbza_ A:35-59,76-97,120-128 1inp d1inpa_ A:3-26,47-70,147-157 1dbz d1dbzd_ D:35-59,76-97,120-128 1dcu d1dcuc_ C:35-65,77-97,120-128 1rdx d1rdxb_ B:27-51,71-89,89-93 1d9q d1d9qc_ C:35-59,75-97,121-128 1dbz d1dbzc_ C:35-59,75-97,120-128 1ni9 d1ni9a_ A:2-27,28-48,277-286 7. d.96.2 ApbE-like duplication: contains two differently decorated beta(2)-alpha(2)-beta(2) subdomains, similar to other T-fold domains; probably does not form the tunnel-shaped oligomers ! T-fold beta(2)-alpha(2)-beta(2); 2 layers: alpha/beta; antiparallel sheet 1234 ! tunnel-shaped: its known members form wide oligomeric barrels different sizes 2o34 d2o34a1 A:191-207,208-226,227-235 1vrm d1vrma1 A:67-87,188-210,212-219 1vrm d1vrma1 A:298-313,316-328,329-336 2o34 d2o34a1 A:44-67,99-117,122-128 9. d.178.1 Aromatic aminoacid monoxygenases, catalytic and oligomerization domains Aromatic aminoacid monoxygenases, catalytic and oligomerization domains unusual fold 1phz d1phza2 A:124-135,250-261,261-266 1mmt d1mmta_ A:124-135,250-261,261-266 2phm d2phma2 A:124-135,250-261,261-266 1mmk d1mmka_ A:124-135,250-261,261-266 1dmw d1dmwa_ A:124-135,250-261,261-266 1pah d1paha_ A:124-135,250-261,261-266 4pah d4paha_ A:124-135,250-261,261-266 5pah d5paha_ A:124-135,250-261,261-266 3pah d3paha_ A:124-135,250-261,261-266 6pah d6paha_ A:124-135,250-261,261-266 1tdw d1tdwa_ A:124-135,250-261,261-266 1tg2 d1tg2a_ A:124-135,250-261,261-266 1j8t d1j8ta_ A:124-135,250-261,261-266 1j8u d1j8ua_ A:124-135,250-261,261-266 1lrm d1lrma_ A:124-135,250-261,261-266 2pah d2paha_ A:124-133,250-261,261-266 1kw0 d1kw0a_ A:124-132,250-261,261-266 1toh d1toha_ A:170-177,296-307,307-312 1kw0 d1kw0a_ A:250-261,296-313,411-417 2phm d2phma2 A:250-261,296-311,410-417 1phz d1phza2 A:250-261,296-311,409-417 2pah d2paha_ A:250-261,296-311,410-417 2pah d2pahb_ B:250-261,296-311,410-417 1toh d1toha_ A:296-307,342-357,456-463 1j8t d1j8ta_ A:250-261,296-311,411-417 1j8u d1j8ua_ A:250-261,296-311,411-417 1dmw d1dmwa_ A:250-261,296-311,411-417 1tg2 d1tg2a_ A:250-261,296-311,411-417 1mmk d1mmka_ A:250-261,296-311,410-417 1tdw d1tdwa_ A:250-261,296-311,411-417 1lrm d1lrma_ A:250-261,296-311,411-417 1pah d1paha_ A:250-261,296-311,411-417 4pah d4paha_ A:250-261,296-311,411-417 3pah d3paha_ A:250-261,296-311,411-417 5pah d5paha_ A:250-261,296-311,411-417 6pah d6paha_ A:250-261,296-311,411-417 1mmt d1mmta_ A:250-261,296-311,411-417 1ltv d1ltva_ A:60-71,135-150,192-198 1ltz d1ltza_ A:60-71,135-150,192-198 1ltu d1ltua_ A:60-71,135-150,192-198 3pah d3paha_ A:203-218,282-297,338-344 1tdw d1tdwa_ A:203-218,282-297,338-344 1pah d1paha_ A:203-218,282-297,338-344 1dmw d1dmwa_ A:203-218,282-297,338-344 1j8u d1j8ua_ A:203-218,282-297,338-344 1lrm d1lrma_ A:203-218,282-297,338-344 2phm d2phma2 A:203-218,282-297,338-344 1j8t d1j8ta_ A:203-218,282-297,338-344 1mlw d1mlwa_ A:190-205,269-284,325-331 1phz d1phza2 A:203-218,282-297,338-344 2toh d2toha_ A:249-264,328-343,384-390 1toh d1toha_ A:249-264,328-343,384-390 1mmk d1mmka_ A:203-218,282-297,338-344 1mmt d1mmta_ A:203-218,282-297,338-344 1kw0 d1kw0a_ A:203-218,282-297,338-344 11. d.53.1 Ribosomal protein S3 C-terminal domain Ribosomal protein S3 C-terminal domain alpha(2)-beta(4); 2 layers: alpha/beta; antiparallel beta-sheet: order 2143 1hnz d1hnzc2 C:112-127,129-145,147-156 2ow8 d2ow8d2 D:112-127,129-145,147-155 2j02 d2j02c2 C:112-127,129-145,147-156 2j00 d2j00c2 C:112-127,129-145,147-156 1j5e d1j5ec2 C:112-127,129-145,147-156 1n32 d1n32c2 C:112-127,129-145,147-156 2uxc d2uxcc2 C:112-127,129-145,147-156 1hnw d1hnwc2 C:112-127,129-145,147-156 1i97 d1i97c2 C:112-127,129-145,147-156 2qbd d2qbdc2 C:111-126,128-144,146-155 2qbf d2qbfc2 C:111-126,128-144,146-155 1n33 d1n33c2 C:112-127,129-145,147-156 1i96 d1i96c2 C:112-127,129-145,146-156 2vhp d2vhpc2 C:111-126,128-144,145-155 1xnr d1xnrc2 C:112-127,129-145,147-156 2qbh d2qbhc2 C:111-126,128-144,145-155 1hnx d1hnxc2 C:112-127,129-145,147-156 2qbj d2qbjc2 C:111-126,128-144,145-155 1fjg d1fjgc2 C:112-127,129-145,147-156 1hr0 d1hr0c2 C:112-127,129-145,147-156 1xmq d1xmqc2 C:112-127,129-145,147-156 1xnq d1xnqc2 C:112-127,129-145,147-156 2aw7 d2aw7c2 C:111-126,128-144,146-155 1i94 d1i94c2 C:112-127,129-145,147-156 2uua d2uuac2 C:112-127,129-145,147-156 2hhh d2hhhc2 C:112-127,129-145,147-156 1xmo d1xmoc2 C:112-127,129-145,147-156 2e5l d2e5lc2 C:112-127,129-145,147-156 2uuc d2uucc2 C:112-127,129-145,147-156 2qp0 d2qp0c2 C:111-126,128-144,146-155 1vs7 d1vs7c2 C:111-126,128-144,146-155 2uub d2uubc2 C:112-127,129-145,147-156 2i2p d2i2pc2 C:111-126,128-144,146-155 2uu9 d2uu9c2 C:112-127,129-145,147-156 2z4m d2z4mc2 C:111-126,128-144,145-155 2z4k d2z4kc2 C:111-126,128-144,145-155 1yl4 d1yl4f2 F:112-127,129-145,147-156 2f4v d2f4vc2 C:112-127,129-145,147-156 1n34 d1n34c2 C:112-127,129-145,147-156 2qou d2qouc2 C:111-126,128-144,146-155 1vs5 d1vs5c2 C:111-126,128-144,145-155 2b9o d2b9oc2 C:112-127,129-145,147-156 2b9m d2b9mc2 C:112-127,129-145,147-156 2b64 d2b64c2 C:112-127,129-145,147-156 1n36 d1n36c2 C:112-127,129-145,147-156 2hgr d2hgrf2 F:112-127,129-145,146-156 2qal d2qalc2 C:111-126,128-144,145-155 2vho d2vhoc2 C:111-126,128-144,147-155 1i95 d1i95c2 C:112-127,129-145,146-156 2qan d2qanc2 C:111-126,128-144,145-155 2qoy d2qoyc2 C:111-126,128-144,146-155 2qb9 d2qb9c2 C:111-126,128-144,146-155 2qow d2qowc2 C:111-126,128-144,145-154 2qbb d2qbbc2 C:111-126,128-144,146-155 3df1 d3df1c2 C:111-126,128-144,145-154 3df3 d3df3c2 C:111-126,128-144,145-154 2avy d2avyc2 C:111-126,128-144,145-154 2hgp d2hgpf2 F:112-127,129-145,147-156 2i2u d2i2uc2 C:111-126,128-144,145-155 2hgi d2hgif2 F:112-127,129-145,146-156 2qal d2qalc2 C:111-126,128-144,180-191 2qan d2qanc2 C:111-126,128-144,180-191 2i2u d2i2uc2 C:111-126,128-144,178-191 3df1 d3df1c2 C:111-126,128-144,179-191 3df3 d3df3c2 C:111-126,128-144,179-191 2qb9 d2qb9c2 C:111-126,128-144,179-191 2qbb d2qbbc2 C:111-126,128-144,179-191 12. d.39.1 DLC DLC core: beta-alpha(2)-beta-X-beta(2); 2 layers: alpha/beta; antiparallel beta-sheet: order 1342 1pwj d1pwja_ A:14-33,34-51,53-59 1f96 d1f96b_ B:14-33,34-51,53-59 1cmi d1cmib_ B:14-33,34-51,53-59 1re6 d1re6b_ B:14-33,34-51,54-60 1re6 d1re6a_ A:14-33,34-51,54-60 1f95 d1f95a_ A:14-33,34-51,53-61 1f95 d1f95b_ B:14-33,34-51,53-61 1cmi d1cmia_ A:14-32,34-51,53-59 1f3c d1f3ca_ A:14-33,34-51,53-60 2pg1 d2pg1a1 A:14-33,34-51,53-61 1f3c d1f3cb_ B:14-33,34-51,54-60 1pwk d1pwka_ A:14-33,34-51,54-60 2p2t d2p2ta1 A:14-33,34-51,53-60 2pg1 d2pg1d1 D:14-33,34-51,53-61 3e2b d3e2ba1 A:14-33,34-51,53-60 1f96 d1f96a_ A:14-33,34-51,53-60 1rhw d1rhwa_ A:14-33,34-51,70-79 2pg1 d2pg1b1 B:14-32,34-51,53-61 2pg1 d2pg1c1 C:14-33,34-51,53-61 1f95 d1f95b_ B:14-33,34-51,72-79 15. d.58.58 TTP0101/SSO1404-like contains extra C-terminal beta-strand that integrates into the beta-sheet of the other subunit in the homodimer, a probable biological unit of this superfamily ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2i8e d2i8ea1 A:13-28,42-59,67-75 2ivy d2ivya1 A:13-28,42-58,67-75 2i0x d2i0xa1 A:13-25,38-54,58-66 1zpw d1zpwx1 X:14-29,42-57,62-69 16. d.215.1 Smc hinge domain Smc hinge domain consists of 2 different alpha+beta subdomains; forms subdomain-swapped dimers 1gxj d1gxja_ A:500-510,549-564,566-574 1gxl d1gxlb_ B:500-510,549-564,565-574 1gxl d1gxlc_ C:500-510,549-564,565-574 1gxl d1gxla_ A:500-510,549-564,565-574 1gxj d1gxjb_ B:500-510,549-564,565-574 1gxl d1gxld_ D:500-510,549-564,565-574 1gxk d1gxkb_ B:500-510,549-564,565-574 1gxk d1gxkc_ C:501-510,549-564,567-574 1gxk d1gxka_ A:501-510,549-564,568-574 1gxk d1gxkd_ D:501-510,549-564,568-574 17. e.50.1 AF1104-like AF1104-like 2 domains; d1: [all-alpha; 3-helical bundle, similar to the immunoglobulin/albumin-binding domain-like fold (scop_cf 46996)]; d2: [alpha/beta; 3 layers, a/b/a; 6-stranded mixed beta-sheet, order: 321456, strand 6 is antiparallel to the rest] 2q40 d2q40a1 A:147-165,221-241,313-320 1xfi d1xfia_ A:147-165,221-241,313-319 2g8l d2g8la1 A:96-110,157-176,235-241 2g8l d2g8lb1 B:96-110,157-175,235-241 2g8l d2g8la1 A:96-110,157-176,255-263 2g8l d2g8lb1 B:96-110,157-175,255-263 2q40 d2q40a1 A:147-165,221-241,334-343 1xfi d1xfia_ A:147-165,221-241,334-343 2ffj d2ffja1 A:98-110,168-179,239-245 2ffj d2ffjb1 B:98-113,168-179,239-245 2ffj d2ffja1 A:98-110,168-179,259-267 2ffj d2ffjb1 B:98-113,168-179,259-267 18. d.250.1 Folate-binding domain some topological similarity to Formylmethanofuran:tetrahydromethanopterin formyltransferase ! Folate-binding domain duplication: consists of two beta(2)-alpha-beta(3)-alpha subdomains swapped with the first strands 1pj7 d1pj7a4 A:516-527,569-587,591-598 1pj6 d1pj6a4 A:516-527,569-587,591-598 1pj5 d1pj5a4 A:516-527,569-587,591-598 1v5v d1v5va2 A:63-74,119-139,141-148 1nrk d1nrka2 A:34-46,87-103,106-112 1vly d1vlya2 A:34-45,87-103,106-112 1woo d1wooa2 A:60-70,112-128,131-138 1wor d1wora2 A:60-70,112-128,131-138 1v5v d1v5vb2 B:63-74,116-138,141-148 1wos d1wosa2 A:60-70,112-128,131-138 1wop d1wopa2 A:60-70,112-128,131-138 1vlo d1vloa2 A:60-71,114-130,134-139 19. d.275.1 Hut operon positive regulatory protein HutP Hut operon positive regulatory protein HutP alpha(2)-beta-alpha(2)-beta(3); 3 layers: a/b/a; antiparallel beta-sheet: order 1234 1vea d1veaa_ A:8-20,22-34,35-44 1wps d1wpsa1 A:8-20,22-34,35-44 1wpt d1wptb1 B:8-20,22-34,35-44 1vea d1veab_ B:8-20,22-34,35-44 1wpt d1wpta1 A:8-20,22-34,35-44 1wps d1wpsb1 B:8-20,22-34,35-44 1wro d1wrob1 B:8-20,22-34,35-45 1wro d1wroa1 A:8-20,22-34,35-45 3boy d3boyb1 B:8-20,22-34,35-45 1wpv d1wpvc1 C:8-20,24-34,35-45 1wro d1wroc1 C:8-20,24-34,35-45 1wpv d1wpvb1 B:8-20,25-34,35-45 1wrn d1wrnb1 B:8-20,25-34,35-45 1wpu d1wpub1 B:8-20,25-34,35-45 1wrn d1wrnc1 C:8-20,25-34,35-45 1wmq d1wmqb1 B:8-20,25-34,35-45 1wrq d1wrqb1 B:8-20,25-34,35-45 1wrn d1wrna1 A:8-19,25-34,35-45 1wpu d1wpua1 A:8-19,25-34,35-45 1wpv d1wpva1 A:8-19,25-34,35-45 3boy d3boyc1 C:8-19,25-34,35-45 3boy d3boya1 A:8-19,25-34,35-45 1wrq d1wrqa1 A:8-19,25-34,35-45 1wmq d1wmqa1 A:8-19,25-34,35-45 20. d.45.1 ClpS-like ClpS-like beta-alpha(2)-beta-alpha-beta; 2 layers, alpha/beta 1rqu d1rqua2 A:64-77,99-114,114-120 1rqv d1rqvb2 B:64-77,99-114,114-120 1rqu d1rqub2 B:64-77,99-114,114-120 1rqs d1rqsa_ A:64-77,99-114,114-120 1rqv d1rqva2 A:64-77,99-114,114-120 2gya d2gya52 5:64-77,99-114,114-120 1dd3 d1dd3b2 B:69-82,107-122,122-128 2gyc d2gyc32 3:64-77,99-114,114-119 2gyc d2gyc52 5:64-77,99-114,114-119 2zjq d2zjq51 5:67-80,101-116,116-122 1dd3 d1dd3a2 A:69-82,107-122,122-128 1dd4 d1dd4b2 B:69-82,107-122,122-128 1yl3 d1yl3j2 J:69-82,107-122,122-128 1yl3 d1yl3i2 I:69-82,107-122,122-128 1dd4 d1dd4a2 A:69-82,107-122,122-128 2bcw d2bcwb1 B:64-77,99-114,115-120 1ctf d1ctfa_ A:64-77,99-114,115-120 1mbv d1mbvb_ B:39-52,77-96,99-106 1mbx d1mbxc_ C:39-52,77-96,100-106 1r6o d1r6oc1 C:39-52,77-96,100-106 1r6q d1r6qc1 C:39-52,77-96,100-106 1mbu d1mbuc_ C:39-52,77-96,100-106 1mbu d1mbud_ D:39-52,77-96,100-106 1r6o d1r6od1 D:39-52,77-96,100-106 1mbx d1mbxd_ D:39-52,77-96,100-106 1r6q d1r6qd1 D:39-52,77-96,100-106 1mg9 d1mg9a_ A:39-52,77-96,100-106 1lzw d1lzwa_ A:24-37,62-81,85-91 24. d.89.1 Origin of replication-binding domain, RBD-like Origin of replication-binding domain, RBD-like alpha-beta-alpha-beta(2)-alpha-beta-alpha-beta; 3 layers: a/b/a; antiparallel sheet 41325 1tbd d1tbda_ A:36-52,76-92,93-99 2tbd d2tbda_ A:36-52,76-92,93-99 2itl d2itla1 A:164-180,204-217,221-227 2itj d2itja1 A:164-180,204-217,221-227 2itl d2itlb1 B:164-180,204-217,221-227 2if9 d2if9a1 A:164-180,204-216,221-227 2ipr d2iprb1 B:164-180,204-216,221-227 2if9 d2if9b1 B:164-180,204-216,221-227 2ipr d2ipra1 A:164-180,204-216,221-227 2ntc d2ntca1 A:164-180,204-217,221-227 2ntc d2ntcb1 B:164-180,204-216,221-227 2fuf d2fufa1 A:164-180,204-216,221-227 1rz9 d1rz9b_ B:49-72,100-121,130-134 1uut d1uutb_ B:49-72,100-121,130-134 1rz9 d1rz9a_ A:49-72,100-121,130-134 1m55 d1m55a_ A:49-72,100-121,130-134 1rz9 d1rz9d_ D:49-72,100-121,130-134 1m55 d1m55b_ B:49-72,100-121,130-134 1osb d1osba_ A:91-102,103-125,144-154 1rz9 d1rz9e_ E:49-72,100-121,130-134 1rz9 d1rz9c_ C:49-72,100-121,130-134 1qx0 d1qx0a_ A:91-102,103-125,144-154 1zm5 d1zm5a1 A:91-102,103-125,144-154 1uut d1uuta_ A:49-72,100-121,130-134 1osb d1osbc_ C:91-102,103-125,144-154 1s6m d1s6ma1 A:91-102,103-125,144-154 26. d.110.6 Sensory domain-like alpha(2)-beta(2)-alpha(2)-beta(3); possibly related to the PAS domain ! Profilin-like core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha 2p7j d2p7ja2 A:46-56,57-76,77-86 2v9a d2v9ab1 B:26-36,37-53,55-62 1ojg d1ojga_ A:48-67,81-93,95-103 2j80 d2j80a1 A:26-36,37-53,55-62 1p0z d1p0zc_ C:26-36,37-53,55-62 1p0z d1p0zb_ B:26-36,37-53,55-62 2p7j d2p7jb2 B:46-56,57-76,77-86 1p0z d1p0zg_ G:26-36,37-53,55-62 1p0z d1p0zi_ I:26-36,37-53,55-62 1p0z d1p0zj_ J:26-36,37-53,55-62 1p0z d1p0ze_ E:26-36,37-53,55-62 1p0z d1p0zd_ D:26-36,37-53,55-62 1p0z d1p0zh_ H:26-36,37-53,55-62 1p0z d1p0za_ A:26-36,37-53,55-62 1p0z d1p0zf_ F:26-36,37-53,55-62 2j80 d2j80b1 B:26-36,37-53,55-62 2v9a d2v9aa1 A:26-36,37-53,55-62 3by8 d3by8a1 A:46-66,80-94,95-103 2hj9 d2hj9c1 C:81-91,92-108,113-120 2hje d2hjea1 A:81-91,92-108,113-120 2hj9 d2hj9d1 D:81-91,92-108,113-120 1zhh d1zhhb1 B:81-91,92-108,113-120 3by8 d3by8a1 A:66-76,80-94,95-103 1p0z d1p0zg_ G:9-26,37-53,55-62 1p0z d1p0zj_ J:9-26,37-53,55-62 1p0z d1p0zh_ H:9-26,37-53,55-62 1p0z d1p0ze_ E:9-26,37-53,55-62 1p0z d1p0zi_ I:9-26,37-53,55-62 1p0z d1p0zb_ B:9-26,37-53,55-62 1p0z d1p0zf_ F:9-26,37-53,55-62 1p0z d1p0za_ A:9-26,37-53,55-62 1p0z d1p0zd_ D:9-26,37-53,55-62 1p0z d1p0zc_ C:9-26,37-53,55-62 2v9a d2v9ab1 B:8-26,37-53,55-62 2j80 d2j80b1 B:6-26,37-53,55-62 2j80 d2j80a1 A:6-26,37-53,55-62 2v9a d2v9aa1 A:8-26,37-53,55-62 2hje d2hjea1 A:52-81,195-207,209-216 2hj9 d2hj9c1 C:52-81,195-207,209-216 1zhh d1zhhb1 B:51-81,195-207,209-216 2hj9 d2hj9d1 D:59-81,92-108,113-120 2hj9 d2hj9d1 D:59-81,195-207,209-216 2hje d2hjea1 A:52-81,92-108,113-120 1zhh d1zhhb1 B:51-81,92-108,113-120 2hj9 d2hj9c1 C:52-81,92-108,113-120 2p7j d2p7jb2 B:9-46,57-76,77-86 2p7j d2p7ja2 A:9-46,57-76,77-86 27. c.52.1 Restriction endonuclease-like Restriction endonuclease-like core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest 1es8 d1es8a_ A:16-30,49-65,89-96 1dfm d1dfmb_ B:16-30,49-65,89-95 1d2i d1d2ib_ B:16-30,49-65,89-95 1kc6 d1kc6d_ D:7-17,34-50,163-173 1dfm d1dfma_ A:16-31,49-65,89-95 1d2i d1d2ia_ A:16-31,49-65,89-95 1vrr d1vrrb1 B:20-35,56-72,124-130 1vrr d1vrra1 A:20-35,56-72,124-130 2p0j d2p0ja1 A:20-35,56-72,124-130 2p0j d2p0jb1 B:20-35,56-72,124-130 1sdo d1sdoa_ A:20-35,56-72,124-130 1az3 d1az3b_ B:2-14,38-60,129-141 1b97 d1b97b_ B:2-19,36-60,129-140 1az4 d1az4a_ A:2-11,41-60,129-141 1bua d1buab_ B:2-14,36-60,129-140 1bss d1bssb_ B:2-12,36-60,129-139 2rve d2rveb_ B:2-12,36-60,129-140 2b0d d2b0da1 A:2-18,36-60,129-141 1dfm d1dfma_ A:16-31,49-65,164-172 2rve d2rvea_ A:2-12,36-60,129-140 1ev7 d1ev7b_ B:29-45,58-78,114-124 1d2i d1d2ia_ A:16-31,49-65,164-172 1es8 d1es8a_ A:16-30,49-65,125-133 1eon d1eonb_ B:2-18,36-60,129-141 1eo4 d1eo4a_ A:2-19,36-60,129-141 2b0e d2b0eb1 B:2-19,36-60,129-141 2b0d d2b0db1 B:2-19,36-60,129-141 1iaw d1iawa_ A:29-45,58-78,114-124 1xhv d1xhvc_ C:7-18,34-50,163-177 2b0e d2b0ea1 A:2-19,36-60,129-141 1eon d1eona_ A:2-19,36-60,129-141 1rve d1rveb_ B:2-19,36-60,129-141 1eo3 d1eo3b_ B:2-18,48-60,129-141 1sx5 d1sx5a_ A:2-19,36-60,129-141 1b95 d1b95a_ A:2-18,48-60,129-141 1eo4 d1eo4b_ B:2-19,36-60,129-141 1eo3 d1eo3a_ A:2-18,36-60,129-141 1dfm d1dfmb_ B:16-30,49-65,125-133 1eoo d1eoob_ B:2-19,36-60,129-141 1d2i d1d2ib_ B:16-30,49-65,125-133 1ev7 d1ev7a_ A:29-45,64-78,114-124 1suz d1suzb_ B:2-19,36-60,129-141 1eop d1eopa_ A:2-14,36-60,129-141 1d2i d1d2ia_ A:16-31,49-65,125-133 1suz d1suza_ A:2-19,36-60,129-141 1dfm d1dfma_ A:16-31,49-65,125-133 1stx d1stxb_ B:2-19,36-60,129-141 1sx8 d1sx8a_ A:2-18,36-60,129-141 1rv5 d1rv5a_ A:2-18,36-60,129-141 1eoo d1eooa_ A:2-19,36-60,129-141 1eop d1eopb_ B:2-19,36-60,129-141 2p0j d2p0jb1 B:20-35,56-72,156-162 1b94 d1b94a_ A:2-19,36-60,129-141 1b96 d1b96b_ B:2-18,36-60,129-141 1rva d1rvaa_ A:2-19,36-60,129-141 1tx3 d1tx3a1 A:7-18,32-50,163-177 1bgb d1bgba_ A:2-18,36-60,129-141 1xhv d1xhvd_ D:7-18,32-50,163-177 1rvb d1rvba_ A:2-19,36-60,129-141 1b96 d1b96a_ A:2-18,36-60,129-141 1b97 d1b97a_ A:2-19,36-60,129-141 1xhu d1xhua_ A:7-18,34-50,163-177 1b95 d1b95b_ B:2-18,36-60,129-141 1stx d1stxa_ A:2-19,36-60,129-141 1rvc d1rvca_ A:2-19,36-60,129-141 1es8 d1es8a_ A:16-30,49-65,164-172 1tx3 d1tx3c1 C:7-18,34-50,163-177 1iaw d1iawb_ B:29-45,58-78,114-124 1xhv d1xhvb_ B:7-18,32-50,163-177 1bsu d1bsua_ A:2-19,36-60,129-141 1sx8 d1sx8b_ B:2-19,36-60,129-141 1az0 d1az0a_ A:2-19,36-60,129-141 1sx5 d1sx5b_ B:2-19,36-60,129-141 1bua d1buaa_ A:2-18,36-60,129-141 1rvc d1rvcb_ B:2-19,36-60,129-141 2gie d2giea1 A:7-18,34-50,163-177 1b94 d1b94b_ B:2-19,36-60,129-141 2gie d2gieb1 B:7-18,34-50,163-177 1az4 d1az4a_ A:2-11,41-60,86-96 1rva d1rvab_ B:2-19,36-60,129-141 1bsu d1bsub_ B:2-14,36-60,129-141 2azo d2azob_ B:13-25,49-60,119-126 1ev7 d1ev7a_ A:29-45,64-78,91-100 1kc6 d1kc6b_ B:7-18,34-50,163-177 1az0 d1az0b_ B:2-14,36-60,128-141 2b0e d2b0ea1 A:2-19,36-60,86-96 1tw8 d1tw8b_ B:7-18,34-50,163-177 1xhu d1xhub_ B:7-18,34-50,163-177 1sx5 d1sx5b_ B:2-19,36-60,86-96 1xmx d1xmxa_ A:161-179,213-227,228-233 1bss d1bssa_ A:3-18,48-60,86-96 1az3 d1az3a_ A:2-9,41-60,86-96 1xhu d1xhud_ D:7-18,29-50,163-177 1tw8 d1tw8a_ A:7-18,34-50,163-177 1rvb d1rvbb_ B:2-18,36-60,129-141 1sx8 d1sx8b_ B:2-19,36-60,86-96 1bua d1buaa_ A:2-18,36-60,86-96 1rv5 d1rv5b_ B:2-11,36-60,129-141 4rve d4rveb_ B:2-13,36-60,86-96 1xhv d1xhva_ A:7-18,29-50,163-177 1eo3 d1eo3b_ B:2-18,48-60,86-97 2gie d2gied1 D:7-18,34-50,163-177 4rve d4rveb_ B:2-13,36-60,129-141 1rve d1rvea_ A:2-12,36-60,129-141 1bss d1bssa_ A:3-18,48-60,129-141 1bss d1bssb_ B:2-12,36-60,86-96 1vrr d1vrrb1 B:20-35,56-72,155-163 2azo d2azoa_ A:13-25,49-60,119-126 1vrr d1vrra1 A:20-35,56-72,155-163 1tx3 d1tx3b1 B:7-18,35-50,163-177 1az4 d1az4b_ B:2-13,36-60,129-141 2gie d2giec1 C:7-18,29-50,163-177 1kc6 d1kc6a_ A:7-16,32-50,163-177 1bgb d1bgbb_ B:2-11,36-60,129-141 4rve d4rvec_ C:2-13,36-60,129-141 4rve d4rvec_ C:2-13,36-60,86-96 1sdo d1sdoa_ A:20-35,56-72,155-162 4rve d4rvea_ A:2-13,36-60,129-141 1b95 d1b95a_ A:2-18,48-60,86-97 2p0j d2p0ja1 A:20-35,56-72,155-162 4rve d4rvea_ A:2-13,36-60,86-96 1tw8 d1tw8d_ D:7-18,29-50,163-177 1tx3 d1tx3d1 D:7-17,35-50,163-177 1yfi d1yfib1 B:132-141,178-189,257-262 1esg d1esga_ A:19-36,56-73,137-144 1yfi d1yfia1 A:132-141,178-189,257-262 1bam d1bama_ A:19-36,56-73,137-144 2azo d2azob_ B:13-25,49-60,74-85 1sa3 d1sa3b_ B:132-141,178-189,257-262 1sa3 d1sa3a_ A:132-141,178-189,257-262 1esg d1esgb_ B:19-36,56-73,137-144 1kc6 d1kc6c_ C:2-18,34-50,163-177 2bam d2bamb_ B:19-36,57-73,137-145 1az3 d1az3b_ B:2-14,38-60,86-97 3bam d3bamb_ B:19-36,57-73,137-144 2azo d2azoa_ A:13-25,49-60,76-85 1eop d1eopa_ A:2-14,36-60,86-97 1eo3 d1eo3a_ A:2-18,36-60,86-97 3bam d3bama_ A:19-36,57-73,137-144 2b0d d2b0da1 A:2-18,36-60,86-97 1eon d1eona_ A:2-19,36-60,86-97 1eon d1eonb_ B:2-18,36-60,86-97 2bam d2bama_ A:19-36,57-73,137-144 1az4 d1az4b_ B:2-13,36-60,86-97 1eo4 d1eo4b_ B:2-19,36-60,86-97 1eo4 d1eo4a_ A:2-19,36-60,86-97 2b0d d2b0db1 B:2-19,36-60,86-97 1eop d1eopb_ B:2-19,36-60,86-97 2b0e d2b0eb1 B:2-19,36-60,86-97 1az0 d1az0b_ B:2-14,36-60,86-97 1b95 d1b95b_ B:2-18,36-60,86-97 1rve d1rveb_ B:2-19,36-60,86-97 1az0 d1az0a_ A:2-19,36-60,86-97 1bsu d1bsub_ B:2-14,36-60,86-97 1b96 d1b96b_ B:2-18,36-60,86-97 1b96 d1b96a_ A:2-18,36-60,86-97 1bsu d1bsua_ A:2-19,36-60,86-97 1stx d1stxb_ B:2-19,36-60,86-97 1rvb d1rvba_ A:2-19,36-60,86-97 1suz d1suzb_ B:2-19,36-60,86-97 1bgb d1bgba_ A:2-18,36-60,86-97 1rvb d1rvbb_ B:2-18,36-60,86-97 1sx5 d1sx5a_ A:2-19,36-60,86-97 1b94 d1b94a_ A:2-19,36-60,86-97 1b97 d1b97b_ B:2-19,36-60,86-97 1bua d1buab_ B:2-14,36-60,86-97 1b94 d1b94b_ B:2-19,36-60,86-97 1eoo d1eooa_ A:2-19,36-60,86-97 1eoo d1eoob_ B:2-19,36-60,86-97 1xhu d1xhuc_ C:2-18,29-50,163-177 1rva d1rvaa_ A:2-19,36-60,86-97 1tw8 d1tw8c_ C:2-18,29-50,163-177 1stx d1stxa_ A:2-19,36-60,86-97 1rve d1rvea_ A:2-12,36-60,86-97 1suz d1suza_ A:2-19,36-60,86-97 1sx8 d1sx8a_ A:2-18,36-60,86-97 1rvc d1rvcb_ B:2-19,36-60,86-97 2rve d2rvea_ A:2-12,36-60,86-97 1rvc d1rvca_ A:2-19,36-60,86-97 1rv5 d1rv5a_ A:2-18,36-60,86-97 1ev7 d1ev7b_ B:29-45,58-78,91-100 1b97 d1b97a_ A:2-19,36-60,86-97 1rva d1rvab_ B:2-19,36-60,86-97 2rve d2rveb_ B:2-12,36-60,86-97 1iaw d1iawa_ A:29-45,58-78,91-100 1bgb d1bgbb_ B:2-11,36-60,86-97 1rv5 d1rv5b_ B:2-11,36-60,86-97 1bam d1bama_ A:19-36,56-73,103-113 1bhm d1bhmb_ B:19-36,56-73,137-145 2bam d2bamb_ B:19-36,57-73,103-113 1esg d1esga_ A:19-36,56-73,103-113 1bhm d1bhma_ A:19-36,56-73,137-144 3bam d3bamb_ B:19-36,57-73,103-113 1esg d1esgb_ B:19-36,56-73,103-113 1kc6 d1kc6d_ D:82-90,144-159,163-173 2bam d2bama_ A:19-36,57-73,103-113 3bam d3bama_ A:19-36,57-73,103-113 1dmu d1dmua_ A:45-60,82-101,204-222 1na6 d1na6a2 A:213-244,268-282,345-350 1b95 d1b95a_ A:2-18,36-49,129-141 1dmu d1dmua_ A:23-46,124-131,204-222 1eo3 d1eo3b_ B:2-18,36-49,129-141 1xhu d1xhub_ B:82-90,144-159,163-177 1dmu d1dmua_ A:23-46,82-101,135-147 1bss d1bssa_ A:3-18,36-49,129-141 1xhu d1xhua_ A:82-90,144-159,163-177 2gie d2gied1 D:82-90,144-159,163-177 2gie d2giea1 A:82-90,144-159,163-177 2gie d2gieb1 B:82-90,144-159,163-177 1tw8 d1tw8d_ D:82-90,144-159,163-177 1kc6 d1kc6b_ B:82-90,144-159,163-177 1fiu d1fiud_ D:3-20,61-85,239-244 1xhv d1xhvd_ D:82-90,144-159,163-177 1fiu d1fiua_ A:3-20,61-85,239-244 1fiu d1fiub_ B:3-20,61-85,239-244 1fiu d1fiuc_ C:3-20,61-85,239-244 1kc6 d1kc6c_ C:82-90,144-159,163-177 1xhv d1xhvb_ B:82-90,144-159,163-177 1tx3 d1tx3b1 B:82-90,144-159,163-177 1tx3 d1tx3c1 C:82-90,144-159,163-177 1tw8 d1tw8b_ B:82-90,144-159,163-177 1tw8 d1tw8c_ C:82-90,144-159,163-177 1tw8 d1tw8a_ A:82-90,144-159,163-177 1xhu d1xhud_ D:82-90,144-159,163-177 1tx3 d1tx3d1 D:82-90,144-159,163-177 1kc6 d1kc6a_ A:82-90,144-159,163-177 1xhv d1xhva_ A:82-90,144-159,163-177 1tx3 d1tx3a1 A:82-90,144-159,163-177 1xhu d1xhuc_ C:82-90,144-159,163-177 1xhv d1xhvc_ C:82-90,144-159,163-177 1bhm d1bhmb_ B:19-36,56-73,103-113 2gie d2giec1 C:82-90,144-159,163-177 1bhm d1bhma_ A:19-36,56-73,103-113 1dmu d1dmua_ A:23-46,82-101,204-222 28. e.1.1 Serpins Serpins contains a cluster of helices and a beta-sandwich 1iz2 d1iz2a_ A:53-68,88-105,110-121 1jmo d1jmoa_ A:135-150,175-194,197-208 8api d8api.1 A:53-68,88-105,110-121 1jrr d1jrra_ A:31-46,102-116,121-133 1d5s d1d5s.1 A:53-68,88-106,110-121 4caa d4caa.1 A:53-68,88-105,110-122 1qmn d1qmna_ A:53-68,88-105,110-121 1mtp d1mtp.1 A:35-50,65-78,82-92 1jmj d1jmja_ A:135-150,175-192,197-208 2ach d2ach.1 A:53-68,88-105,109-121 1br8 d1br8l_ L:79-94,115-133,138-150 1qmb d1qmb.1 A:53-68,88-106,110-122 2d26 d2d26a1 A:53-68,88-106,110-121 2ant d2antl_ L:79-94,115-133,138-150 1jmj d1jmjb_ B:135-150,175-192,197-208 2beh d2behi1 I:79-94,115-134,139-150 1dvn d1dvna_ A:35-50,68-84,89-100 1as4 d1as4.1 A:53-68,88-105,110-122 1br8 d1br8i_ I:79-94,115-132,138-150 9api d9api.1 A:53-68,88-105,110-122 1b3k d1b3ka_ A:35-50,68-84,90-100 1b3k d1b3kb_ B:35-50,68-84,90-100 1b3k d1b3kc_ C:35-50,68-84,90-100 1b3k d1b3kd_ D:35-50,68-84,90-100 1dzh d1dzhl_ L:79-94,116-133,138-150 2znh d2znha1 A:79-94,116-132,138-150 2hij d2hijl1 L:79-94,115-133,138-150 2beh d2behl1 L:79-94,115-133,138-150 1ezx d1ezx.1 A:53-68,88-106,110-122 1lk6 d1lk6l_ L:79-94,115-133,138-150 1ant d1antl_ L:79-94,116-133,138-150 1dzg d1dzgl_ L:79-94,115-133,138-150 1oyh d1oyhl_ L:79-94,115-133,138-150 1e05 d1e05l_ L:79-94,116-134,137-150 1att d1atta_ A:80-95,116-133,139-151 2znh d2znhb1 B:79-94,115-132,138-150 1jvq d1jvql_ L:79-94,115-133,138-150 7api d7api.1 A:53-68,88-105,110-122 1r1l d1r1ll_ L:79-94,115-133,138-150 2b4x d2b4xl1 L:79-94,115-133,138-150 1lk6 d1lk6i_ I:79-94,115-132,138-150 1oo8 d1oo8a_ A:53-68,88-105,112-122 1ath d1athb_ B:79-94,116-132,138-150 9pai d9paia_ A:53-68,86-102,107-118 1jvq d1jvqi_ I:79-94,115-132,138-150 1r1l d1r1li_ I:79-94,115-132,138-150 1dvm d1dvmc_ C:35-50,68-84,90-101 1oc0 d1oc0a_ A:35-50,68-84,90-101 1db2 d1db2b_ B:35-50,68-84,90-101 3caa d3caa.1 A:53-68,88-105,109-122 1dzg d1dzgi_ I:79-94,115-132,138-150 2ant d2anti_ I:79-94,115-132,138-150 1db2 d1db2a_ A:35-50,68-84,90-101 1dvm d1dvmb_ B:35-50,68-84,90-101 1att d1attb_ B:80-95,116-133,139-151 1hle d1hle.1 A:53-68,91-105,110-122 1dvm d1dvma_ A:35-50,68-84,90-101 1e04 d1e04i_ I:79-94,115-132,138-150 1dvm d1dvmd_ D:35-50,68-84,90-101 1ath d1atha_ A:79-94,115-132,138-149 1imv d1imva_ A:61-76,97-111,115-126 1c5g d1c5ga_ A:58-73,91-107,112-124 1nq9 d1nq9l_ L:79-94,118-132,138-150 1e04 d1e04l_ L:79-94,115-133,137-150 2b4x d2b4xi1 I:79-94,115-132,138-150 1dzh d1dzhi_ I:79-94,115-133,138-150 3evj d3evjl1 L:79-94,118-132,138-150 1e05 d1e05i_ I:79-94,117-132,138-150 1ant d1anti_ I:79-94,116-131,138-150 2hij d2hiji1 I:79-94,115-132,138-150 1oph d1opha_ A:53-69,88-105,111-122 1kct d1kcta_ A:53-69,88-105,110-122 1azx d1azxl_ L:79-94,118-133,138-150 1jti d1jtib_ B:30-45,78-91,96-109 1e03 d1e03l_ L:79-94,118-133,138-150 2gd4 d2gd4i1 I:79-94,118-139,138-150 2gd4 d2gd4c1 C:79-94,118-139,138-150 1lj5 d1lj5a_ A:35-51,68-84,89-100 1psi d1psia_ A:53-68,88-106,111-122 1xqj d1xqja_ A:31-47,101-113,115-120 1a7c d1a7ca_ A:35-51,68-84,89-100 1xqg d1xqga_ A:31-47,101-113,115-120 2b5t d2b5ti1 I:79-94,118-134,137-150 1oyh d1oyhi_ I:79-94,115-134,140-150 1lq8 d1lq8.3 E:49-64,84-99,105-118 1lq8 d1lq8.1 A:49-64,84-99,105-118 1ova d1ovac_ C:53-68,93-105,109A-121 1ova d1ovaa_ A:53-68,93-105,109A-122 1nq9 d1nq9i_ I:79-94,118-133,138-150 1ova d1ovab_ B:53-68,93-105,109A-122 1lq8 d1lq8.4 G:49-64,81-99,105-117 1uhg d1uhgc_ C:30-45,80-92,96-109 1t1f d1t1fb1 B:79-94,118-133,137-150 1lq8 d1lq8.2 C:49-64,84-99,105-118 1t1f d1t1fc1 C:79-94,118-133,137-150 1t1f d1t1fa1 A:79-94,118-133,137-150 1jti d1jtia_ A:30-45,78-92,96-109 1xqg d1xqga_ A:31-47,65-85,85-96 1hp7 d1hp7a_ A:53-69,88-106,110-122 1xqj d1xqja_ A:31-47,65-85,85-96 1xqg d1xqgb_ B:31-47,65-85,85-96 1ova d1ovac_ C:53-68,127-138,141-145 1uhg d1uhgb_ B:30-45,81-93,96-109 1xqg d1xqgb_ B:31-47,101-109,115-120 1ova d1ovad_ D:53-68,94-106,109A-122 1sek d1seka_ A:46-62,115-127,128-134 1jmo d1jmoa_ A:135-150,214-226,228-232 1jmj d1jmjb_ B:135-150,214-226,227-232 1ova d1ovab_ B:53-68,127-139,141-146 1jmj d1jmja_ A:135-150,214-226,227-232 1qlp d1qlpa_ A:53-69,127-139,140-146 1hp7 d1hp7a_ A:53-69,127-139,140-146 1uhg d1uhgc_ C:30-45,114-126,128-133 1uhg d1uhgd_ D:30-45,114-126,128-133 2ant d2anti_ I:79-94,155-167,168-174 1uhg d1uhga_ A:30-45,114-126,128-133 1uhg d1uhga_ A:30-45,80-93,96-109 1oyh d1oyhi_ I:79-94,155-167,168-174 1e05 d1e05i_ I:79-94,155-167,168-174 1uhg d1uhgb_ B:30-45,114-126,128-133 1dzh d1dzhi_ I:79-94,155-167,168-174 1uhg d1uhgd_ D:30-45,80-93,96-109 1e04 d1e04i_ I:79-94,155-167,168-174 1sng d1snga_ A:35-50,98-109,110-117 1dzg d1dzgi_ I:79-94,155-167,168-174 1psi d1psia_ A:53-68,127-139,140-146 1f0c d1f0c.1 A:53-68,127-135,141-145 1ath d1atha_ A:79-94,155-167,169-174 8api d8api.1 A:53-68,127-139,140-145 1iz2 d1iz2a_ A:53-68,127-139,140-145 1c8o d1c8o.1 A:19-34,74-82,84-89 2d26 d2d26a1 A:53-68,127-139,140-145 9pai d9paia_ A:53-68,124-136,137-142 2hij d2hiji1 I:79-94,155-167,169-174 1br8 d1br8i_ I:79-94,155-167,168-174 9api d9api.1 A:53-68,127-139,140-146 1jrr d1jrra_ A:31-46,138-150,151-157 2beh d2behl1 L:79-94,155-167,168-174 1jvq d1jvql_ L:79-94,155-167,168-174 2ant d2antl_ L:79-94,155-167,168-174 1dzh d1dzhl_ L:79-94,155-167,168-174 1oyh d1oyhl_ L:79-94,155-167,168-174 1jvq d1jvqi_ I:79-94,155-167,168-174 1hle d1hle.1 A:53-68,127-139,140-146 1r1l d1r1ll_ L:79-94,155-167,168-174 1lk6 d1lk6i_ I:79-94,155-167,168-174 1br8 d1br8l_ L:79-94,155-167,168-174 2znh d2znha1 A:79-94,155-167,168-174 1e05 d1e05l_ L:79-94,155-167,168-174 1nq9 d1nq9l_ L:79-94,155-167,168-174 2b4x d2b4xl1 L:79-94,155-167,168-174 1oo8 d1oo8a_ A:53-68,127-139,140-146 2hij d2hijl1 L:79-94,155-167,168-174 1e04 d1e04l_ L:79-94,155-167,168-174 1dzg d1dzgl_ L:79-94,155-167,168-174 3evj d3evjl1 L:79-94,155-167,168-174 2znh d2znhb1 B:79-94,155-167,168-174 1lk6 d1lk6l_ L:79-94,155-167,168-174 1ath d1athb_ B:79-94,155-167,168-174 1azx d1azxl_ L:79-94,155-167,168-174 1e03 d1e03l_ L:79-94,155-167,168-174 1by7 d1by7a_ A:3-24,31-46,403-413 2hij d2hiji1 I:49-71,79-94,417-427 1jrr d1jrra_ A:5-24,31-46,403-413 1e04 d1e04i_ I:49-71,79-94,417-427 1psi d1psia_ A:24-46,53-68,379-389 1sng d1snga_ A:9-28,35-50,350-359 1ath d1athb_ B:48-71,79-94,417-427 1uhg d1uhgd_ D:2-23,30-45,373-383 2ant d2anti_ I:48-71,79-94,417-427 1ova d1ovad_ D:25-46,53-68,379-389 1iz2 d1iz2a_ A:24-46,53-68,379-389 1t1f d1t1fb1 B:45-71,79-94,417-427 1t1f d1t1fa1 A:45-71,79-94,417-427 1t1f d1t1fc1 C:45-71,79-94,417-427 1b3k d1b3kd_ D:7-28,35-50,367-377 1uhg d1uhgb_ B:2-23,30-45,373-383 1b3k d1b3kb_ B:7-28,35-50,367-377 1jti d1jtia_ A:2-23,30-45,373-383 1b3k d1b3ka_ A:7-28,35-50,367-377 1b3k d1b3kc_ C:7-28,35-50,367-377 1e05 d1e05i_ I:45-71,79-94,417-427 1oo8 d1oo8a_ A:24-46,53-68,379-389 1dvm d1dvmd_ D:4-28,35-50,367-377 1jti d1jtib_ B:2-23,30-45,373-383 1atu d1atua_ A:21-46,53-69,379-389 1uhg d1uhga_ A:2-23,30-45,373-383 1uhg d1uhgc_ C:2-23,30-45,373-383 1lk6 d1lk6i_ I:45-71,79-94,417-427 1nq9 d1nq9l_ L:45-70,79-94,417-427 1ath d1atha_ A:46-70,79-94,417-427 2beh d2behi1 I:45-71,79-94,417-427 1ova d1ovaa_ A:25-46,53-68,379-389 2b4x d2b4xi1 I:45-71,79-94,417-427 1oc0 d1oc0a_ A:6-28,35-50,367-377 1db2 d1db2b_ B:4-28,35-50,367-377 1ova d1ovab_ B:25-46,53-68,379-389 1dvm d1dvmb_ B:4-28,35-50,367-377 1oyh d1oyhi_ I:45-71,79-94,417-427 1nq9 d1nq9i_ I:45-71,79-94,417-427 1ova d1ovac_ C:25-46,53-68,379-389 2b4x d2b4xl1 L:43-70,79-94,417-427 1db2 d1db2a_ A:4-28,35-50,367-377 1jvq d1jvqi_ I:45-71,79-94,417-427 1r1l d1r1li_ I:45-71,79-94,417-427 1dvm d1dvma_ A:4-28,35-50,367-377 1br8 d1br8i_ I:46-71,79-94,417-427 1dzg d1dzgi_ I:45-71,79-94,417-427 1ant d1antl_ L:46-71,79-94,417-427 1e03 d1e03i_ I:45-71,79-94,417-427 1ant d1anti_ I:46-71,79-94,417-427 1dzh d1dzhi_ I:45-71,79-94,417-427 1sr5 d1sr5a_ A:45-71,79-94,417-427 1jmj d1jmjb_ B:102-127,135-150,465-475 2znh d2znhb1 B:45-71,79-94,417-427 1jmj d1jmja_ A:102-127,135-150,465-475 1dvm d1dvmc_ C:5-28,35-50,367-377 1lk6 d1lk6l_ L:45-71,79-94,417-427 3evj d3evjl1 L:45-71,79-94,417-427 1jmo d1jmoa_ A:102-127,135-150,465-475 2gd4 d2gd4c1 C:45-71,79-94,417-427 2gd4 d2gd4i1 I:45-71,79-94,417-427 1jvq d1jvql_ L:45-71,79-94,417-427 2b5t d2b5ti1 I:45-71,79-94,417-427 1att d1atta_ A:46-72,80-95,418-428 1e03 d1e03l_ L:45-71,79-94,417-427 1azx d1azxi_ I:45-71,79-94,417-427 1dvn d1dvna_ A:3-28,35-50,367-378 3evj d3evji1 I:45-71,79-94,417-427 1azx d1azxl_ L:45-71,79-94,417-427 1oyh d1oyhl_ L:42-70,79-94,417-427 1tb6 d1tb6i_ I:45-71,79-94,417-427 1att d1attb_ B:46-72,80-95,418-428 1imv d1imva_ A:29-54,61-76,383-393 2hij d2hijl1 L:43-71,79-94,417-427 1kct d1kcta_ A:21-46,53-69,380-388 1c5g d1c5ga_ A:26-51,58-73,390-401 2beh d2behl1 L:43-71,79-94,417-427 1xqg d1xqga_ A:-2-24,31-47,363-373 2znh d2znha1 A:44-71,79-94,417-427 1xqj d1xqja_ A:-2-24,31-47,363-373 1e05 d1e05l_ L:42-71,79-94,417-427 1dzg d1dzgl_ L:42-71,79-94,417-427 1qlp d1qlpa_ A:24-46,53-69,379-389 1dzh d1dzhl_ L:43-71,79-94,417-427 1br8 d1br8l_ L:43-71,79-94,417-427 1e04 d1e04l_ L:42-71,79-94,417-427 2ant d2antl_ L:43-71,79-94,417-427 1r1l d1r1ll_ L:42-71,79-94,417-427 1xqg d1xqgb_ B:-2-24,31-47,363-373 1qmn d1qmna_ A:26-46,53-68,385-393 1oph d1opha_ A:21-46,53-69,379-389 1a7c d1a7ca_ A:3-28,35-51,367-377 1hp7 d1hp7a_ A:22-46,53-69,379-389 1lj5 d1lj5a_ A:3-28,35-51,367-378 1k9o d1k9oi_ I:11-39,46-62,375-384 1sek d1seka_ A:11-39,46-62,375-384 30. d.52.3 Prokaryotic type KH domain (KH-domain type II) Prokaryotic and eukaryotic domains share a KH-motif but have different topologies ! Alpha-lytic protease prodomain-like core: alpha-beta(2)-(alpha)-beta; 2 layers: alpha/beta 1l2f d1l2fa2 A:200-213,255-266,268-274 1hh2 d1hh2p2 P:200-213,255-266,268-275 1n34 d1n34c1 C:25-52,81-96,97-104 2asb d2asba2 A:185-198,240-251,253-259 1k0r d1k0rb2 B:185-198,240-251,253-260 2atw d2atwc2 C:185-198,240-251,253-259 2atw d2atwa2 A:185-198,240-251,253-259 1k0r d1k0ra2 A:185-198,240-251,253-260 2i2u d2i2uc1 C:24-47,82-95,96-102 1ega d1egab2 B:189-207,251-270,273-281 2atw d2atwa3 A:263-273,307-318,319-327 2atw d2atwc3 C:263-273,307-318,319-326 1ega d1egaa2 A:189-207,251-270,273-282 2asb d2asba3 A:263-273,307-318,319-327 2qou d2qouc1 C:24-47,80-95,96-103 1k0r d1k0ra3 A:263-273,307-318,319-326 1hh2 d1hh2p3 P:278-288,322-333,334-341 1l2f d1l2fa3 A:278-288,322-333,334-341 2f4v d2f4vc1 C:25-48,81-96,97-104 1k0r d1k0rb3 B:263-273,307-318,319-326 1wf3 d1wf3a2 A:188-206,250-269,271-281 3df3 d3df3c1 C:24-47,80-95,96-103 3df1 d3df1c1 C:24-47,80-95,96-103 1x1l d1x1lx2 X:189-207,251-270,272-282 1x18 d1x18x2 X:189-207,251-270,272-282 2zkq d2zkqc1 C:10-30,63-79,82-91 1n36 d1n36c1 C:25-52,81-93,99-105 2j02 d2j02c1 C:28-48,83-96,97-106 2j00 d2j00c1 C:28-48,83-96,97-106 1hnz d1hnzc1 C:25-48,81-96,97-106 2aw7 d2aw7c1 C:24-47,82-95,96-104 1n33 d1n33c1 C:25-48,81-96,99-105 2hhh d2hhhc1 C:25-48,81-96,97-106 1vs5 d1vs5c1 C:24-47,80-95,96-105 1hnx d1hnxc1 C:25-48,81-96,97-106 2qbh d2qbhc1 C:24-47,80-95,96-104 2avy d2avyc1 C:24-47,80-95,96-105 1vs7 d1vs7c1 C:24-47,82-95,96-104 2qbj d2qbjc1 C:24-47,80-95,96-104 1i94 d1i94c1 C:25-48,81-96,97-106 1j5e d1j5ec1 C:25-48,81-96,97-106 1i96 d1i96c1 C:25-48,81-96,97-106 1hr0 d1hr0c1 C:28-48,81-96,97-106 1fjg d1fjgc1 C:25-48,81-96,97-106 1hnw d1hnwc1 C:25-48,81-96,97-106 2vhp d2vhpc1 C:24-47,82-95,97-104 2qb9 d2qb9c1 C:24-47,80-95,96-104 2qbb d2qbbc1 C:24-47,80-95,96-104 1i95 d1i95c1 C:25-48,81-96,98-106 2qal d2qalc1 C:24-47,80-95,96-105 2qan d2qanc1 C:24-47,80-95,96-105 2z4k d2z4kc1 C:24-47,80-95,96-105 2z4m d2z4mc1 C:24-47,80-95,96-105 2uua d2uuac1 C:25-48,81-96,99-106 2qbd d2qbdc1 C:24-47,80-95,96-105 2uub d2uubc1 C:25-48,81-96,99-106 2qbf d2qbfc1 C:24-47,80-95,96-105 1xnr d1xnrc1 C:25-48,81-96,99-106 2uxc d2uxcc1 C:25-48,81-96,99-106 2uu9 d2uu9c1 C:25-48,79-96,99-106 2uuc d2uucc1 C:25-48,81-96,99-106 1xnq d1xnqc1 C:25-48,81-96,99-106 1xmo d1xmoc1 C:25-48,81-96,99-106 1n32 d1n32c1 C:25-48,81-96,99-106 1xmq d1xmqc1 C:25-48,81-96,99-106 2i2p d2i2pc1 C:24-47,78-95,96-105 2qoy d2qoyc1 C:24-47,78-95,96-105 2b9o d2b9oc1 C:25-48,81-96,98-106 2b9m d2b9mc1 C:25-48,81-96,98-106 2b64 d2b64c1 C:25-48,81-96,98-106 2hgi d2hgif1 F:25-48,81-95,98-106 31. d.58.26 GHMP Kinase, C-terminal domain common fold is elaborated with additional secondary structures ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1s4e d1s4ef2 F:282-296,316-336,338-344 1s4e d1s4ea2 A:282-296,316-336,338-344 1s4e d1s4ei2 I:282-296,316-336,338-344 1wuu d1wuub2 B:322-336,358-373,375-381 1s4e d1s4eh2 H:282-296,316-336,338-344 1s4e d1s4ed2 D:282-296,316-336,338-344 1wuu d1wuua2 A:322-336,358-373,375-381 1wuu d1wuuc2 C:322-336,358-373,375-381 1s4e d1s4eb2 B:282-296,316-336,338-345 1wuu d1wuud2 D:322-336,358-373,375-381 1pie d1piea2 A:324-338,360-379,382-387 1vis d1visa2 A:254-269,290-302,303-309 2r42 d2r42a2 A:312-326,349-364,365-372 1kvk d1kvka2 A:312-326,349-364,365-372 1kkh d1kkha2 A:259-274,295-307,308-314 1k47 d1k47f2 F:271-282,305-320,321-329 1k47 d1k47e2 E:271-282,305-320,321-329 1k47 d1k47a2 A:271-282,305-320,321-329 1k47 d1k47b2 B:271-282,305-320,321-329 1k47 d1k47c2 C:271-282,305-320,321-329 1k47 d1k47d2 D:271-282,305-320,321-329 1uek d1ueka2 A:210-224,243-258,258-266 1oj4 d1oj4b2 B:219-233,250-261,265-273 1oj4 d1oj4a2 A:219-233,250-261,265-273 32. d.218.1 Nucleotidyltransferase Nucleotidyltransferase core: alpha-beta-turn-beta-X-beta-(alpha); mixed beta-sheet, order of core strands: 123 2o5a d2o5ab1 B:3-18,44-63,84-92 2o5a d2o5aa1 A:3-18,44-63,84-92 1ylq d1ylqa1 A:-1-13,46-62,65-72 2id1 d2id1b1 B:2-18,44-63,84-91 2id1 d2id1a1 A:2-18,44-63,84-91 1ylq d1ylqb1 B:-1-13,46-62,65-72 1rzt d1rztm3 M:388-408,443-455,486-494 1xsl d1xsli3 I:388-408,443-455,486-494 1rzt d1rzti3 I:388-408,443-455,486-494 2gws d2gwsa3 A:388-408,443-455,486-494 1miy d1miyb2 B:2-19,48-57,75-83 1miy d1miya2 A:2-19,48-57,75-83 1miv d1mivb2 B:2-19,48-57,75-83 1miw d1miwb2 B:2-19,48-57,75-83 1miw d1miwa2 A:2-19,48-57,75-83 1miv d1miva2 A:2-19,48-57,75-83 1wot d1wota_ A:8-21,53-69,72-77 1xsl d1xsle3 E:388-408,442-455,486-494 1xsl d1xslm3 M:388-408,440-455,486-494 1xsl d1xsla3 A:388-408,440-455,486-494 1rzt d1rzta3 A:388-408,440-455,486-494 3c5g d3c5gb3 B:388-408,440-455,486-494 2gws d2gwsm3 M:388-408,440-455,486-494 1vj7 d1vj7b2 B:217-233,274-290,319-328 2gws d2gwse3 E:388-408,440-455,486-494 1ou5 d1ou5a2 A:13-27,56-68,88-95 1rzt d1rzte3 E:388-408,440-455,486-494 1ou5 d1ou5b2 B:13-27,56-68,88-95 2pbe d2pbea2 A:3-19,58-66,97-107 3c5f d3c5fa3 A:388-408,440-455,486-494 3c5g d3c5ga3 A:388-408,440-455,486-494 1zjm d1zjma3 A:151-171,209-222,252-260 3c5f d3c5fb3 B:388-408,440-455,486-495 2gws d2gwsi3 I:388-408,440-455,486-495 1jn3 d1jn3a2 A:261-275,275-290,290-295 3c2l d3c2la3 A:151-171,209-222,252-260 1zjn d1zjna3 A:151-171,209-222,252-260 2fmq d2fmqa3 A:151-171,209-222,252-260 2pxi d2pxia3 A:151-171,209-222,252-260 2fms d2fmsa3 A:151-171,209-222,252-260 3c2m d3c2ma3 A:151-171,209-222,252-260 2iso d2isoa3 A:151-171,209-222,252-260 2isp d2ispa3 A:151-171,209-222,252-260 2fmp d2fmpa3 A:151-171,209-222,252-260 1mq3 d1mq3a3 A:151-171,209-222,252-260 3c2k d3c2ka3 A:151-171,209-222,252-260 7icf d7icfa4 A:261-274,275-290,290-295 2pfn d2pfna3 A:388-408,442-455,486-494 2pfp d2pfpa3 A:388-408,442-455,486-494 2bcu d2bcua3 A:388-408,442-455,486-494 9icp d9icpa4 A:264-274,275-290,290-295 1xsn d1xsna3 A:388-408,442-455,486-494 2p66 d2p66a3 A:151-171,208-222,252-260 2i9g d2i9ga3 A:261-274,275-290,290-295 1bpz d1bpza4 A:264-274,275-290,290-295 1tva d1tvaa3 A:261-274,275-290,290-295 3c5f d3c5fa3 A:495-508,509-524,524-529 2bcq d2bcqa3 A:388-408,442-455,486-494 1xsp d1xspa3 A:388-408,442-455,486-494 2bcr d2bcra3 A:388-408,442-455,486-494 7icp d7icpa4 A:264-274,275-290,290-295 2bcs d2bcsa3 A:388-408,442-455,486-494 2pfo d2pfoa3 A:388-408,442-455,486-494 9icn d9icna4 A:264-274,275-290,290-295 1zqx d1zqxa2 A:261-274,275-290,290-295 7icn d7icna4 A:264-274,275-290,290-295 1zjm d1zjma3 A:261-274,275-290,290-295 1xsl d1xsle3 E:495-508,509-524,524-529 2bcv d2bcva3 A:388-408,442-455,486-494 1rpl d1rpla2 A:261-274,275-290,290-295 1xsl d1xsli3 I:495-508,509-524,524-529 1bpx d1bpxa4 A:261-274,275-290,290-295 1xsl d1xslm3 M:495-508,509-524,524-529 2gws d2gwsa3 A:495-508,509-524,524-529 7icj d7icja4 A:264-274,275-290,290-295 1rzt d1rzta3 A:495-508,509-524,524-529 1bpb d1bpba2 A:261-274,275-290,290-295 8icy d8icya4 A:264-274,275-290,290-295 2van d2vana2 A:261-274,275-290,290-295 1rzt d1rzti3 I:495-508,509-524,524-529 1xsl d1xsla3 A:495-508,509-524,524-529 1tv9 d1tv9a3 A:261-274,275-290,290-295 7icg d7icga4 A:264-274,275-290,290-295 9icg d9icga4 A:264-274,275-290,290-295 1zqw d1zqwa2 A:261-274,275-290,290-295 8icm d8icma4 A:264-274,275-290,290-295 8icp d8icpa4 A:264-274,275-290,290-295 1rzt d1rzte3 E:495-508,509-524,524-529 3c5f d3c5fb3 B:495-508,509-524,524-529 8ico d8icoa4 A:264-274,275-290,290-295 8icl d8icla4 A:264-274,275-290,290-295 9ics d9icsa4 A:261-274,275-290,290-295 7icu d7icua4 A:264-274,275-290,290-295 1rzt d1rztm3 M:495-508,509-524,524-529 1bpd d1bpda3 A:261-274,275-290,290-295 1zqy d1zqya2 A:261-274,275-290,290-295 1zqu d1zqua2 A:261-274,275-290,290-295 9icq d9icqa4 A:264-274,275-290,290-295 8ict d8icta4 A:264-274,275-290,290-295 2gws d2gwsm3 M:495-508,509-524,524-529 9icv d9icva4 A:264-274,275-290,290-295 7icr d7icra4 A:264-274,275-290,290-295 2pfq d2pfqa3 A:388-408,442-455,486-494 1zqz d1zqza2 A:261-274,275-290,290-295 1nom d1noma2 A:261-274,275-290,290-295 9icm d9icma4 A:264-274,275-290,290-295 7ick d7icka4 A:264-274,275-290,290-295 9icr d9icra4 A:264-274,275-290,290-295 2gws d2gwse3 E:495-508,509-524,524-529 2gws d2gwsi3 I:495-508,509-524,524-529 9icl d9icla4 A:264-274,275-290,290-295 9ici d9icia4 A:264-274,275-290,290-295 8ick d8icka4 A:264-274,275-290,290-295 9icu d9icua4 A:264-274,275-290,290-295 3c2l d3c2la3 A:264-274,275-290,290-295 2p66 d2p66a3 A:261-274,275-290,290-295 8icu d8icua4 A:264-274,275-290,290-295 7ici d7icia4 A:264-274,275-290,290-295 7icq d7icqa4 A:264-274,275-290,290-295 9icb d9icba4 A:264-274,275-290,290-295 1zqj d1zqja4 A:264-274,275-290,290-295 3c2m d3c2ma3 A:264-274,275-290,290-295 9ict d9icta4 A:264-274,275-290,290-295 2bpg d2bpgb4 B:264-275,275-290,290-295 8ice d8icea4 A:264-274,275-290,290-295 2bpc d2bpca2 A:261-274,275-290,290-295 8icb d8icba4 A:264-274,275-290,290-295 8icq d8icqa4 A:264-274,275-290,290-295 7ico d7icoa4 A:264-274,275-290,290-295 7icl d7icla4 A:264-274,275-290,290-295 1vj7 d1vj7a2 A:210-233,274-290,319-328 9ick d9icka4 A:264-274,275-290,290-295 1ueu d1ueua2 A:17-39,72-84,106-115 1zqq d1zqqa4 A:264-274,275-290,290-295 1huo d1huoa4 A:264-275,275-290,290-295 9ich d9icha4 A:264-274,275-290,290-295 8icx d8icxa4 A:264-274,275-290,290-295 9icf d9icfa4 A:264-274,275-290,290-295 7icm d7icma4 A:264-274,275-290,290-295 7ich d7icha4 A:264-274,275-290,290-295 8ich d8icha4 A:264-274,275-290,290-295 2bpc d2bpca2 A:151-171,207-222,252-260 7ict d7icta4 A:264-274,275-290,290-295 1zqm d1zqma4 A:264-274,275-290,290-295 9ica d9icaa4 A:264-274,275-290,290-295 8icj d8icja4 A:264-274,275-290,290-295 1zqb d1zqba4 A:264-274,275-290,290-295 8icc d8icca4 A:264-274,275-290,290-295 9ico d9icoa4 A:264-274,275-290,290-295 7ice d7icea4 A:264-274,275-290,290-295 8ici d8icia4 A:264-274,275-290,290-295 9ice d9icea4 A:264-274,275-290,290-295 9icx d9icxa4 A:264-274,275-290,290-295 1zqp d1zqpa4 A:264-274,275-290,290-295 7icv d7icva4 A:264-274,275-290,290-295 9icw d9icwa4 A:264-274,275-290,290-295 1zqo d1zqoa4 A:264-274,275-290,290-295 8ica d8icaa4 A:264-274,275-290,290-295 1zqn d1zqna4 A:264-274,275-290,290-295 2fms d2fmsa3 A:264-274,275-290,290-295 1zqf d1zqfa4 A:264-274,275-290,290-295 8icz d8icza4 A:264-274,275-290,290-295 1zqr d1zqra4 A:264-274,275-290,290-295 9icc d9icca4 A:264-274,275-290,290-295 8ics d8icsa4 A:264-274,275-290,290-295 8icw d8icwa4 A:264-274,275-290,290-295 1zqs d1zqsa4 A:264-274,275-290,290-295 8icn d8icna4 A:264-274,275-290,290-295 8icf d8icfa4 A:264-274,275-290,290-295 1zqv d1zqva2 A:261-274,275-290,290-295 1zqa d1zqaa4 A:264-274,275-290,290-295 8icv d8icva4 A:264-274,275-290,290-295 9icj d9icja4 A:264-274,275-290,290-295 1no5 d1no5a_ A:10-26,58-73,77-84 1zqe d1zqea4 A:264-274,275-290,290-295 1zql d1zqla4 A:264-274,275-290,290-295 1bpe d1bpea3 A:151-171,207-222,252-260 1zqc d1zqca4 A:264-274,275-290,290-295 2iso d2isoa3 A:264-274,275-290,290-295 2bcv d2bcva3 A:498-508,509-524,524-529 1zqd d1zqda4 A:264-274,275-290,290-295 2fmq d2fmqa3 A:264-274,275-290,290-295 1zqi d1zqia4 A:264-274,275-290,290-295 1zqt d1zqta4 A:264-274,275-290,290-295 7ics d7icsa4 A:264-274,275-290,290-295 1zqk d1zqka4 A:264-274,275-290,290-295 2isp d2ispa3 A:264-274,275-290,290-295 1huz d1huzb4 B:264-275,275-290,290-295 1bpx d1bpxa4 A:151-171,207-222,252-260 2pfo d2pfoa3 A:498-508,509-524,524-529 2pxi d2pxia3 A:264-274,275-290,290-295 8icg d8icga4 A:264-274,275-290,290-295 2bpf d2bpfa4 A:264-274,275-290,290-295 1zqh d1zqha4 A:264-274,275-290,290-295 8icr d8icra4 A:264-274,275-290,290-295 1zqv d1zqva2 A:151-171,207-222,252-260 1huo d1huob4 B:264-275,275-290,290-295 1zqg d1zqga4 A:264-274,275-290,290-295 1zjn d1zjna3 A:264-274,275-290,290-295 1f5a d1f5aa4 A:54-84,125-140,163-174 2fmp d2fmpa3 A:264-274,275-290,290-295 1zqz d1zqza2 A:151-171,207-222,252-260 1xsn d1xsna3 A:498-508,509-524,524-529 9icy d9icya4 A:264-274,275-290,290-295 1mq3 d1mq3a3 A:264-274,275-290,290-295 8icb d8icba4 A:151-171,207-222,252-260 1huz d1huza4 A:264-275,275-290,290-295 8icr d8icra4 A:151-171,207-222,252-260 8icq d8icqa4 A:151-171,207-222,252-260 1fa0 d1fa0b4 B:41-71,112-128,150-161 3c2k d3c2ka3 A:264-274,275-290,290-295 1bpb d1bpba2 A:151-171,207-222,252-260 8icj d8icja4 A:151-171,207-222,252-260 8icz d8icza4 A:151-171,207-222,252-260 1zqb d1zqba4 A:151-171,207-222,252-260 8icu d8icua4 A:151-171,207-222,252-260 2q66 d2q66a2 A:41-71,112-128,150-161 1bpd d1bpda3 A:151-171,207-222,252-260 1zqa d1zqaa4 A:151-171,207-222,252-260 1q78 d1q78a2 A:54-84,125-140,163-174 8icy d8icya4 A:151-171,207-222,252-260 1zqf d1zqfa4 A:151-171,207-222,252-260 8icx d8icxa4 A:151-171,207-222,252-260 1q79 d1q79a2 A:54-84,125-140,163-174 1nom d1noma2 A:151-171,207-222,252-260 1zqp d1zqpa4 A:151-171,207-222,252-260 8ici d8icia4 A:151-171,207-222,252-260 1zqn d1zqna4 A:151-171,207-222,252-260 8ice d8icea4 A:151-171,207-222,252-260 1zql d1zqla4 A:151-171,207-222,252-260 1zqo d1zqoa4 A:151-171,207-222,252-260 2van d2vana2 A:151-171,207-222,252-260 9ica d9icaa4 A:151-171,207-222,252-260 1zqq d1zqqa4 A:151-171,207-222,252-260 2hhp d2hhpa2 A:41-71,112-128,150-161 8icg d8icga4 A:151-171,207-222,252-260 1zqc d1zqca4 A:151-171,207-222,252-260 2bpg d2bpga4 A:264-274,275-290,290-295 7icu d7icua4 A:151-171,207-222,252-260 8icp d8icpa4 A:151-171,207-222,252-260 1zqk d1zqka4 A:151-171,207-222,252-260 1bpy d1bpya4 A:151-171,207-222,252-260 1zqi d1zqia4 A:151-171,207-222,252-260 1zqw d1zqwa2 A:151-171,207-222,252-260 1zqm d1zqma4 A:151-171,207-222,252-260 8ick d8icka4 A:151-171,207-222,252-260 8icn d8icna4 A:151-171,207-222,252-260 3c66 d3c66a2 A:41-71,112-128,150-161 8icv d8icva4 A:151-171,207-222,252-260 1jn3 d1jn3a2 A:151-171,207-222,252-260 8ica d8icaa4 A:151-171,207-222,252-260 2o1p d2o1pb2 B:41-71,112-128,150-161 1bpy d1bpya4 A:264-274,275-290,290-295 8ict d8icta4 A:151-171,207-222,252-260 8icw d8icwa4 A:151-171,207-222,252-260 7icl d7icla4 A:151-171,207-222,252-260 1zqd d1zqda4 A:151-171,207-222,252-260 7icf d7icfa4 A:151-171,207-222,252-260 9icw d9icwa4 A:151-171,207-222,252-260 2o1p d2o1pa2 A:41-71,112-128,150-161 1bpz d1bpza4 A:151-171,207-222,252-260 9icn d9icna4 A:151-171,207-222,252-260 1zqg d1zqga4 A:151-171,207-222,252-260 9icf d9icfa4 A:151-171,207-222,252-260 7icj d7icja4 A:151-171,207-222,252-260 1zqu d1zqua2 A:151-171,207-222,252-260 1uet d1ueta2 A:17-39,71-84,106-115 3c66 d3c66b2 B:41-71,112-128,150-161 1fa0 d1fa0a4 A:41-71,112-128,150-161 1zqe d1zqea4 A:151-171,207-222,252-260 9icc d9icca4 A:151-171,207-222,252-260 9ics d9icsa4 A:151-171,207-222,252-260 2bpg d2bpga4 A:151-171,207-222,252-260 9icu d9icua4 A:151-171,207-222,252-260 9ich d9icha4 A:151-171,207-222,252-260 8icl d8icla4 A:151-171,207-222,252-260 8ich d8icha4 A:151-171,207-222,252-260 1zqx d1zqxa2 A:151-171,207-222,252-260 1tv9 d1tv9a3 A:151-171,207-222,252-260 8icm d8icma4 A:151-171,207-222,252-260 2nrk d2nrka1 A:9-28,66-74,95-105 7icn d7icna4 A:151-171,207-222,252-260 9icv d9icva4 A:151-171,207-222,252-260 1zqt d1zqta4 A:151-171,207-222,252-260 7ici d7icia4 A:151-171,207-222,252-260 7icm d7icma4 A:151-171,207-222,252-260 7ice d7icea4 A:151-171,207-222,252-260 9ico d9icoa4 A:151-171,207-222,252-260 7icg d7icga4 A:151-171,207-222,252-260 7ict d7icta4 A:151-171,207-222,252-260 1zqr d1zqra4 A:151-171,207-222,252-260 9icl d9icla4 A:151-171,207-222,252-260 7icv d7icva4 A:151-171,207-222,252-260 1rpl d1rpla2 A:151-171,207-222,252-260 9icm d9icma4 A:151-171,207-222,252-260 7icr d7icra4 A:151-171,207-222,252-260 1zqh d1zqha4 A:151-171,207-222,252-260 8icc d8icca4 A:151-171,207-222,252-260 9ick d9icka4 A:151-171,207-222,252-260 9icr d9icra4 A:151-171,207-222,252-260 8ics d8icsa4 A:151-171,207-222,252-260 7ick d7icka4 A:151-171,207-222,252-260 1zqs d1zqsa4 A:151-171,207-222,252-260 1zqj d1zqja4 A:151-171,207-222,252-260 7ich d7icha4 A:151-171,207-222,252-260 8ico d8icoa4 A:151-171,207-222,252-260 2bpg d2bpgb4 B:151-171,207-222,252-260 9icj d9icja4 A:151-171,207-222,252-260 2bpf d2bpfa4 A:151-171,207-222,252-260 9icp d9icpa4 A:151-171,207-222,252-260 9icg d9icga4 A:151-171,207-222,252-260 9ice d9icea4 A:151-171,207-222,252-260 1zqy d1zqya2 A:151-171,207-222,252-260 9icq d9icqa4 A:151-171,207-222,252-260 8icf d8icfa4 A:151-171,207-222,252-260 9ict d9icta4 A:151-171,207-222,252-260 9icy d9icya4 A:151-171,207-222,252-260 9icx d9icxa4 A:151-171,207-222,252-260 7icp d7icpa4 A:151-171,207-222,252-260 7icq d7icqa4 A:151-171,207-222,252-260 9icb d9icba4 A:151-171,207-222,252-260 1mq2 d1mq2a3 A:151-171,207-222,252-260 7ico d7icoa4 A:151-171,207-222,252-260 1huo d1huoa4 A:151-171,207-222,252-260 1huo d1huob4 B:151-171,207-222,252-260 7ics d7icsa4 A:151-171,207-222,252-260 1tva d1tvaa3 A:151-171,207-222,252-260 9ici d9icia4 A:151-171,207-222,252-260 2i9g d2i9ga3 A:151-171,207-222,252-260 1huz d1huzb4 B:151-171,207-222,252-260 1no5 d1no5b_ B:10-26,58-72,77-84 1px5 d1px5b2 B:24-44,93-113,116-121 1kdh d1kdha4 A:304-324,354-373,427-438 1huz d1huza4 A:151-171,207-222,252-260 1kej d1keja4 A:304-324,354-373,427-438 2nrk d2nrka1 A:9-28,66-74,74-80 1jms d1jmsa4 A:304-324,354-373,427-438 1px5 d1px5a2 A:24-44,93-112,116-121 1px5 d1px5b2 B:24-44,93-113,140-153 1uev d1ueva2 A:17-39,70-84,106-115 7icf d7icfa4 A:151-171,207-222,223-228 8icw d8icwa4 A:151-171,207-222,223-228 7icu d7icua4 A:151-171,207-222,223-228 9icp d9icpa4 A:151-171,207-222,223-228 8icv d8icva4 A:151-171,207-222,223-228 7icl d7icla4 A:151-171,207-222,223-228 7icj d7icja4 A:151-171,207-222,223-228 8ich d8icha4 A:151-171,207-222,223-228 8icu d8icua4 A:151-171,207-222,223-228 1px5 d1px5a2 A:24-44,93-112,140-153 8ict d8icta4 A:151-171,207-222,223-228 7icp d7icpa4 A:151-171,207-222,223-228 1bpd d1bpda3 A:151-171,207-222,223-228 2b4v d2b4va2 A:53-76,110-129,264-270 8ice d8icea4 A:151-171,207-222,223-228 2be3 d2be3a1 A:2-34,82-96,131-144 2be3 d2be3b1 B:2-34,82-96,131-144 1sz1 d1sz1a2 A:18-39,71-88,106-116 1sz1 d1sz1b2 B:18-39,71-88,106-116 2ewr d2ewra1 A:3-20,50-61,87-101 1tfw d1tfwa2 A:17-39,71-87,106-115 1tfw d1tfwc2 C:17-39,71-87,106-116 1tfy d1tfya2 A:17-39,71-87,106-116 2dr5 d2dr5a2 A:17-39,71-87,106-116 1tfy d1tfyc2 C:17-39,71-87,106-116 1tfy d1tfyd2 D:17-39,71-88,106-116 2zh6 d2zh6a2 A:17-39,71-87,106-116 2dr8 d2dr8a2 A:17-39,71-87,106-116 2zha d2zhaa2 A:17-39,71-88,106-115 2dra d2draa2 A:17-39,71-87,106-116 2zh2 d2zh2a2 A:17-39,71-87,106-116 2dvi d2dvia2 A:17-39,71-87,106-116 2zh4 d2zh4a2 A:17-39,71-87,106-116 2zh9 d2zh9a2 A:17-39,71-87,106-116 2zh8 d2zh8a2 A:17-39,71-87,106-116 2drb d2drba2 A:17-39,71-87,106-116 2dr9 d2dr9a2 A:17-39,71-88,106-116 1r89 d1r89a2 A:17-39,71-87,106-116 2zh3 d2zh3a2 A:17-39,71-87,106-116 2zh5 d2zh5a2 A:17-39,71-87,106-116 2zhb d2zhba2 A:17-39,71-88,106-116 1tfw d1tfwb2 B:17-39,71-88,106-116 1tfw d1tfwd2 D:17-39,71-87,106-116 34. b.116.1 Viral chemokine binding protein m3 Viral chemokine binding protein m3 consists of two different beta-sandwich domains of partial topological similarity to immunoglobulin-like folds 1ml0 d1ml0a_ A:28-39,43-59,150-160 2nz1 d2nz1x1 X:28-39,43-59,150-160 1mkf d1mkfa_ A:28-39,43-59,150-160 2nz1 d2nz1b1 B:28-39,43-59,150-160 1mkf d1mkfb_ B:28-39,43-59,150-160 2nyz d2nyzb1 B:28-39,43-59,150-160 2nz1 d2nz1a1 A:28-39,43-59,150-160 2nyz d2nyza1 A:28-39,43-59,150-160 38. d.147.1 Methenyltetrahydromethanopterin cyclohydrolase Methenyltetrahydromethanopterin cyclohydrolase consists of two alpha+beta subdomains 1qlm d1qlma_ A:3-19,45-58,134-141 1qlm d1qlma_ A:3-19,45-58,163-170 1qlm d1qlma_ A:183-197,243-254,287-295 39. e.3.1 beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like contains a cluster of helices and an alpha+beta sandwich 1alq d1alqa_ A:275-292,32-41,42-52 1mki d1mkia_ A:72-89,236-253,272-282 1mki d1mkib_ B:72-89,236-253,272-282 2osu d2osua1 A:72-89,236-253,272-282 3brm d3brma1 A:72-89,236-253,272-282 1w79 d1w79b1 B:47-64,372-381,416-427 1w79 d1w79a1 A:47-64,372-381,416-427 2osu d2osub1 B:72-89,236-253,272-282 2osu d2osua1 A:210-224,236-253,272-282 1xp4 d1xp4c2 C:184-200,199-209,247-257 1mki d1mkib_ B:210-224,236-253,272-282 2osu d2osub1 B:210-224,236-253,272-282 1w8y d1w8ya1 A:47-64,372-381,416-427 1mki d1mkia_ A:210-224,236-253,272-282 1w8q d1w8qa1 A:47-64,372-381,416-427 3brm d3brma1 A:210-224,236-253,272-282 1w8q d1w8qb1 B:47-64,372-381,416-427 1xp4 d1xp4a2 A:184-200,199-209,247-257 1xp4 d1xp4b2 B:184-200,199-209,247-257 1w79 d1w79c1 C:47-64,372-381,416-427 1w8q d1w8qc1 C:47-64,372-381,416-427 1w8y d1w8yb1 B:47-64,372-381,416-427 1w79 d1w79d1 D:47-64,372-381,416-427 1xp4 d1xp4d2 D:184-200,199-208,247-257 1w8y d1w8yc1 C:47-64,372-381,416-427 1w79 d1w79a1 A:356-370,372-381,416-427 2j9p d2j9pa1 A:50-67,371-382,417-428 1w79 d1w79b1 B:356-370,372-381,416-427 1w8y d1w8ya1 A:356-370,372-381,416-427 1w8q d1w8qa1 A:356-370,372-381,416-427 1w8y d1w8yd1 D:47-64,372-381,416-427 1w8q d1w8qc1 C:356-370,372-381,416-427 1w79 d1w79c1 C:356-370,372-381,416-427 1w8q d1w8qd1 D:47-64,370-381,416-427 1w8q d1w8qb1 B:356-370,372-381,416-427 1ome d1omeb_ B:68-87,200-214,244-253 1w79 d1w79d1 D:356-370,372-381,416-427 1ghp d1ghpa_ A:68-87,200-214,242-253 1w8y d1w8yb1 B:356-370,372-381,416-427 1djc d1djca_ A:68-87,200-214,242-253 1e25 d1e25a_ A:165-173,172-180,230-240B 1w8y d1w8yc1 C:356-370,372-381,416-427 1ghm d1ghma_ A:68-87,200-214,242-253 1blh d1blha_ A:68-87,200-214,242-253 1tvf d1tvfb2 B:204-220,219-228,267-277 1tvf d1tvfa2 A:204-220,219-228,267-277 3blm d3blma_ A:68-87,200-214,242-253 1djb d1djba_ A:68-87,200-214,242-253 1dja d1djaa_ A:68-87,200-214,242-253 1g6a d1g6aa_ A:182-197,200-214,242-254 1w8q d1w8qd1 D:356-370,370-381,416-427 1pio d1piob_ B:68-87,200-214,242-253 1w8y d1w8yd1 D:356-370,372-381,416-427 1ghi d1ghia_ A:68-87,200-214,242-253 1kge d1kgea_ A:68-87,200-214,242-253 1kgf d1kgfa_ A:68-87,200-214,242-253 4blm d4blmb_ B:68-87,200-214,242-254 1es2 d1es2a_ A:153-168,167-177,221-231 1pio d1pioa_ A:68-87,200-214,242-253 1es5 d1es5a_ A:153-168,167-176,221-231 1g6a d1g6aa_ A:68-87,200-214,242-254 1g68 d1g68a_ A:68-87,200-214,242-254 3brm d3brmb1 B:210-224,236-251,272-281 2a49 d2a49a1 A:182-197,200-214,242-254 1j9m d1j9ma_ A:153-168,167-177,221-231 1esi d1esia_ A:153-168,167-176,221-231 1blc d1blca_ A:68-87,200-214,242-253 1mbl d1mbla_ A:68-87,200-214,242-254 1rcj d1rcja_ A:182-197,200-214,242-254 2h5s d2h5sa1 A:182-197,200-214,242-254 2j9p d2j9pb1 B:357-371,371-381,417-428 1es4 d1es4a_ A:153-168,167-177,221-231 2zd8 d2zd8a1 A:182-197,200-214,242-254 2a3u d2a3ua1 A:182-197,200-214,242-254 2j9p d2j9pa1 A:357-371,371-382,417-428 1q2p d1q2pa_ A:182-197,200-214,242-254 1ome d1omea_ A:68-87,200-214,242-253 1mbl d1mblb_ B:68-87,200-214,242-254 1ong d1onga_ A:182-197,200-214,242-254 1tdg d1tdga_ A:182-197,200-214,242-254 1skf d1skfa_ A:153-168,167-176,221-231 1tdl d1tdla_ A:182-197,200-214,242-254 1es3 d1es3a_ A:153-168,167-176,221-231 1htz d1htzb_ B:68-87,200-214,242-254 1n9b d1n9ba_ A:182-197,200-214,242-254 1htz d1htza_ A:68-87,200-214,242-254 3c4o d3c4oa1 A:182-197,200-214,241-254 3c7v d3c7vc1 C:68-87,200-214,241-252 2zc4 d2zc4b1 B:457-471,504-521,568-577 1i2w d1i2wb_ B:68-87,200-214,241-254 1htz d1htze_ E:68-87,200-214,242-254 1li9 d1li9a_ A:68-87,200-214,242-254 1htz d1htzc_ C:68-87,200-214,242-254 1jwz d1jwza_ A:68-87,200-214,242-254 3bec d3beca2 A:161-177,176-186,221-231 1jtd d1jtda_ A:68-87,200-214,241-252 1u60 d1u60a_ A:64-81,227-242,263-271 1nzu d1nzua2 A:161-177,176-185,221-231 1htz d1htzd_ D:68-87,200-214,242-254 1scw d1scwa_ A:114-123,122-133,211-215 1blp d1blpa_ A:68-87,200-214,241-253 1bt5 d1bt5a_ A:68-87,200-214,242-254 1sdn d1sdna2 A:161-177,176-185,221-231 1s0w d1s0wa_ A:68-87,200-214,241-252 1i2w d1i2wa_ A:68-87,200-214,241-254 1i2s d1i2sb_ B:68-87,200-214,241-254 1lhy d1lhya_ A:68-87,200-214,242-254 3c7u d3c7uc1 C:68-87,200-214,241-252 1u60 d1u60d_ D:64-81,227-242,263-271 1ck3 d1ck3a_ A:68-87,200-214,242-254 1pzp d1pzpa_ A:68-87,200-214,242-254 3beb d3beba2 A:161-177,176-186,221-231 1i2s d1i2sa_ A:68-87,200-214,241-254 1u60 d1u60b_ B:64-81,227-242,263-271 3c7v d3c7va1 A:68-87,200-214,241-252 1s0w d1s0wb_ B:68-87,200-214,241-252 2b5r d2b5ra1 A:68-87,200-214,241-252 1jwz d1jwza_ A:182-196,200-214,242-254 2g2w d2g2wa1 A:68-87,200-214,242-254 1m40 d1m40a_ A:182-196,200-214,242-254 1nxy d1nxya_ A:68-87,200-214,242-254 1u60 d1u60c_ C:64-81,227-242,263-271 1ome d1omeb_ B:182-197,200-214,244-253 2g2u d2g2ua1 A:68-87,200-214,242-254 1hd8 d1hd8a2 A:161-177,176-185,221-231 2b5r d2b5rb1 B:68-87,200-214,241-252 1nzo d1nzoa2 A:161-177,176-186,221-231 1jwv d1jwva_ A:68-87,200-214,242-254 1pzo d1pzoa_ A:68-87,200-214,242-254 3c4p d3c4pa1 A:68-87,200-214,242-254 1kgg d1kgga_ A:68-87,200-214,241-253 1fqg d1fqga_ A:68-87,200-214,241-252 1tem d1tema_ A:68-87,200-214,242-254 1li0 d1li0a_ A:68-87,200-214,242-254 1nxy d1nxya_ A:182-196,200-214,242-254 1htz d1htzb_ B:182-196,200-214,242-254 3c7u d3c7ua1 A:68-87,200-214,241-252 1axb d1axba_ A:68-87,200-214,242-254 1z6f d1z6fa2 A:161-177,176-185,221-231 1htz d1htze_ E:182-196,200-214,242-254 1htz d1htza_ A:182-196,200-214,242-254 1nj4 d1nj4a2 A:161-177,176-185,221-231 1jwp d1jwpa_ A:68-87,200-214,242-254 1u60 d1u60a_ A:201-215,227-242,263-271 1htz d1htzc_ C:182-196,200-214,242-254 2a49 d2a49a1 A:68-87,200-214,242-254 1htz d1htzd_ D:182-196,200-214,242-254 1xpb d1xpba_ A:68-87,200-214,242-254 1pzp d1pzpa_ A:182-196,200-214,242-254 1o7e d1o7eb_ B:68-88,200-214,242-253 1nym d1nyma_ A:68-87,200-214,242-254 1nym d1nyma_ A:182-196,200-214,242-254 2dns d2dnsa1 A:58-77,99-106,286-292 2b5r d2b5ra1 A:182-196,200-214,241-252 1m40 d1m40a_ A:68-87,200-214,242-254 2dns d2dnsb1 B:59-77,99-106,286-292 3c7v d3c7vc1 C:182-196,200-214,241-252 1jtg d1jtga_ A:68-87,200-213,241-252 1esu d1esua_ A:68-87,200-214,242-254 2b5r d2b5rb1 B:182-196,200-214,241-252 2dns d2dnsf1 F:59-77,99-106,286-292 1jvj d1jvja_ A:68-87,200-214,242-254 1pio d1piob_ B:182-197,200-214,242-253 2efu d2efua1 A:59-77,99-106,286-292 1s0w d1s0wb_ B:182-196,200-214,241-252 1tdg d1tdga_ A:68-87,200-214,242-254 1hzo d1hzoa_ A:182-197,200-214,242-252 1jtg d1jtgc_ C:68-87,200-213,241-252 1nyy d1nyya_ A:68-87,200-214,242-254 2drw d2drwa1 A:59-77,99-106,286-292 2efx d2efxa1 A:58-77,99-106,286-292 1u60 d1u60b_ B:201-215,227-242,263-271 1li9 d1li9a_ A:182-196,200-214,242-254 1q2p d1q2pa_ A:68-87,200-214,242-254 1li0 d1li0a_ A:182-196,200-214,242-254 2dns d2dnsd1 D:59-77,99-106,286-292 2dns d2dnse1 E:59-77,99-106,286-292 1jtd d1jtda_ A:182-196,200-214,241-252 1bt5 d1bt5a_ A:182-196,200-214,242-254 1ny0 d1ny0a_ A:182-196,200-214,242-254 2efu d2efuf1 F:59-77,99-106,286-292 1k25 d1k25d4 D:3457-3471,3504-3520,3566-3577 1u60 d1u60d_ D:201-215,227-242,263-271 2efu d2efuc1 C:59-77,99-106,286-292 1tdl d1tdla_ A:68-87,200-214,242-254 2dns d2dnsc1 C:59-77,99-106,286-292 2zd8 d2zd8a1 A:68-87,200-214,242-254 1ong d1onga_ A:68-87,200-214,242-254 2a3u d2a3ua1 A:68-87,200-214,242-254 1lhy d1lhya_ A:182-196,200-214,242-254 2efx d2efxe1 E:59-77,99-106,286-292 2drw d2drwd1 D:59-77,99-106,286-292 2efu d2efud1 D:59-77,99-106,286-292 2drw d2drwc1 C:58-77,99-106,286-292 2efu d2efub1 B:59-77,99-106,286-292 2g2w d2g2wa1 A:182-196,200-214,242-254 1ghp d1ghpa_ A:182-197,200-214,242-253 2h5s d2h5sa1 A:68-87,200-214,242-254 2drw d2drwf1 F:59-77,99-106,286-292 1rcj d1rcja_ A:68-87,200-214,242-254 1zg4 d1zg4a1 A:68-87,200-214,242-254 2efu d2efue1 E:58-77,99-106,286-292 1n4o d1n4oa_ A:68-88,200-214,242-253 1u60 d1u60c_ C:201-215,227-242,263-271 2drw d2drwb1 B:59-77,99-106,286-292 1djc d1djca_ A:182-197,200-214,242-253 2efx d2efxb1 B:59-77,99-106,286-292 2efx d2efxd1 D:59-77,99-106,286-292 1n4o d1n4ob_ B:68-88,200-214,242-253 1shv d1shva_ A:68-87,200-214,242-254 1s0w d1s0wa_ A:182-196,200-214,241-252 1dja d1djaa_ A:182-197,200-214,242-253 1jvj d1jvja_ A:182-196,200-214,242-254 1ero d1eroa_ A:68-87,200-214,241-252 2z2l d2z2lb1 B:457-471,504-521,566-577 1n9b d1n9ba_ A:68-87,200-214,242-254 2efx d2efxc1 C:59-77,99-106,286-292 1blh d1blha_ A:182-197,200-214,242-253 1ck3 d1ck3a_ A:182-196,200-214,242-254 1jwv d1jwva_ A:182-196,200-214,242-254 1erq d1erqa_ A:68-87,200-214,241-252 1ny0 d1ny0a_ A:68-87,200-214,242-254 2efx d2efxf1 F:58-77,99-106,286-292 1bul d1bula_ A:68-87,200-214,241-253 3blm d3blma_ A:182-197,200-214,242-253 1djb d1djba_ A:182-197,200-214,242-253 2drw d2drwe1 E:59-77,99-106,286-292 1ghm d1ghma_ A:182-197,200-214,242-253 3c7u d3c7uc1 C:182-196,200-214,241-252 1pyy d1pyya4 A:457-471,504-522,566-577 1erm d1erma_ A:68-87,200-214,241-252 1htz d1htzf_ F:182-196,200-214,242-252 1pio d1pioa_ A:182-197,200-214,242-253 1axb d1axba_ A:182-196,200-214,242-254 1xpb d1xpba_ A:182-196,200-214,242-254 1xa7 d1xa7b_ B:153-168,172-184,204-218 1esu d1esua_ A:182-196,200-214,242-254 2cc1 d2cc1a1 A:68-87,200-214,242-254 2zc4 d2zc4e1 E:457-471,504-521,566-577 2g2u d2g2ua1 A:182-196,200-214,242-254 1kge d1kgea_ A:182-197,200-214,242-253 1tem d1tema_ A:182-196,200-214,242-254 3c4p d3c4pa1 A:182-196,200-214,242-254 1kgf d1kgfa_ A:182-197,200-214,242-253 1rp5 d1rp5b4 B:457-471,504-522,566-577 1pzo d1pzoa_ A:182-196,200-214,242-254 2z2l d2z2le1 E:457-471,504-521,566-577 1jwp d1jwpa_ A:182-196,200-214,242-254 2zc3 d2zc3e1 E:457-471,504-521,566-577 3c4o d3c4oa1 A:68-87,200-214,241-254 1ghi d1ghia_ A:182-197,200-214,242-253 1g68 d1g68a_ A:182-196,200-214,242-254 1bue d1buea_ A:68-87,200-214,241-253 1nyy d1nyya_ A:182-196,200-214,242-254 1rp5 d1rp5a4 A:457-471,504-522,566-577 1k25 d1k25b4 B:1457-1471,1504-1520,1566-1577 2blm d2blmb_ B:68-87,200-214,242-252 2z2m d2z2me1 E:457-471,504-521,566-577 1w5d d1w5da1 A:357-371,371-381,417-427 4blm d4blmb_ B:182-196,200-214,242-254 1ome d1omea_ A:182-197,200-214,242-253 1bsg d1bsga_ A:182-197,200-214,241-254 1alq d1alqa_ A:68-87,200-214,242-252 1blc d1blca_ A:182-197,200-214,242-253 1fqg d1fqga_ A:182-196,200-214,241-252 1zg4 d1zg4a1 A:182-196,200-214,242-254 1k25 d1k25d4 D:3335-3351,3504-3520,3566-3577 1o7e d1o7ea_ A:182-196,200-214,242-253 1mbl d1mbla_ A:182-196,200-214,242-254 1ero d1eroa_ A:182-196,200-214,241-252 2cc1 d2cc1a1 A:182-196,200-214,242-254 3c7v d3c7va1 A:182-196,200-214,241-252 1erm d1erma_ A:182-196,200-214,241-252 1btl d1btla_ A:68-87,200-214,242-254 1erq d1erqa_ A:182-196,200-214,241-252 3c7u d3c7ua1 A:182-196,200-214,241-252 1o7e d1o7ea_ A:68-88,200-214,242-253 1shv d1shva_ A:182-196,200-214,242-254 1o7e d1o7eb_ B:182-196,200-214,242-253 1mbl d1mblb_ B:182-196,200-214,242-254 1n4o d1n4oa_ A:182-196,200-214,242-253 1alq d1alqa_ A:182-197,200-214,242-252 1n4o d1n4ob_ B:182-196,200-214,242-253 1htz d1htzf_ F:68-87,200-214,242-252 1hzo d1hzob_ B:182-196,200-214,242-252 1i2s d1i2sb_ B:182-196,200-214,241-254 1i2w d1i2wa_ A:182-196,200-214,241-254 2blm d2blma_ A:68-87,200-214,241-252 1i2w d1i2wb_ B:182-196,200-214,241-254 1btl d1btla_ A:182-196,200-214,242-254 1blp d1blpa_ A:182-197,200-214,241-253 2z2l d2z2lb1 B:336-351,504-521,566-577 1iyq d1iyqa_ A:182-196,200-214,242-252 1i2s d1i2sa_ A:182-196,200-214,241-254 2blm d2blmb_ B:182-196,200-214,242-252 1kgg d1kgga_ A:182-197,200-214,241-253 1iyo d1iyoa_ A:182-196,200-214,242-252 1bza d1bzaa_ A:182-196,200-214,242-252 1iys d1iysa_ A:182-196,200-214,242-252 2zc4 d2zc4e1 E:335-351,504-521,566-577 1iyp d1iypa_ A:182-196,200-214,242-252 1jtg d1jtga_ A:182-196,200-213,241-252 4blm d4blma_ A:68-87,200-214,241-252 1jtg d1jtgc_ C:182-196,200-213,241-252 1bul d1bula_ A:182-196,200-214,241-253 2z2m d2z2me1 E:335-351,504-521,566-577 1m6k d1m6ka_ A:168-182,187-199,224-236 1m6k d1m6kb_ B:168-182,187-199,224-236 1bue d1buea_ A:182-196,200-214,241-253 2blm d2blma_ A:182-196,200-214,241-252 1xa7 d1xa7a_ A:153-167,172-184,207-218 4blm d4blma_ A:182-196,200-214,241-252 1bsg d1bsga_ A:68-86,200-214,241-254 1xa1 d1xa1c_ C:153-167,172-184,207-218 1k38 d1k38b_ B:162-176,181-193,211-222 1k38 d1k38a_ A:162-176,181-193,211-222 1dy6 d1dy6a_ A:182-196,200-214,241-252 1dy6 d1dy6b_ B:182-196,200-214,241-252 1iys d1iysa_ A:68-88,200-214,242-252 1iyo d1iyoa_ A:68-88,200-214,242-252 1hzo d1hzob_ B:68-88,200-214,242-252 1pio d1pioa_ A:68-87,165-172,242-253 2blm d2blma_ A:68-87,165-172,241-252 1ghp d1ghpa_ A:68-87,165-172,242-253 1iyp d1iypa_ A:68-88,200-214,242-252 1h8y d1h8yb_ B:162-176,181-193,216-229 1xa1 d1xa1b_ B:153-167,172-184,204-218 4blm d4blma_ A:68-87,165-172,241-252 2dcf d2dcfa1 A:272-286,296-306,346-355 1hzo d1hzoa_ A:68-88,200-214,242-252 1xkz d1xkzc_ C:483-497,502-514,534-548 1ghm d1ghma_ A:68-87,165-172,242-253 1wyc d1wyca1 A:272-286,296-306,346-355 1bza d1bzaa_ A:68-88,200-214,242-252 1xkz d1xkzd_ D:483-497,502-514,534-548 1blc d1blca_ A:68-87,165-172,242-253 1iyq d1iyqa_ A:68-88,200-214,242-252 1wyb d1wyba1 A:272-286,296-306,346-355 1dja d1djaa_ A:68-87,165-172,242-253 1djb d1djba_ A:68-87,165-172,242-253 1pio d1piob_ B:68-87,165-172,242-253 3blm d3blma_ A:68-87,165-172,242-253 1h5x d1h5xa_ A:162-176,181-193,215-229 1xkz d1xkza_ A:483-497,502-514,534-548 1ghi d1ghia_ A:68-87,165-172,242-253 1h8y d1h8ya_ A:162-176,181-193,215-229 1h8z d1h8za_ A:162-176,181-193,215-229 1h5x d1h5xb_ B:162-176,181-193,215-229 1xa1 d1xa1a_ A:153-166,172-184,204-218 1xkz d1xkzb_ B:483-497,502-514,534-548 1xa1 d1xa1d_ D:153-166,172-184,204-218 1kge d1kgea_ A:68-87,165-172,242-253 1e3u d1e3ud_ D:162-176,181-193,215-229 2dns d2dnsb1 B:248-262,266-277,313-323 2efu d2efud1 D:248-262,266-277,313-323 1nrf d1nrfa_ A:496-510,515-527,549-561 2dns d2dnsd1 D:248-262,266-277,313-323 2efu d2efuc1 C:248-262,266-277,313-323 2drw d2drwd1 D:248-262,266-277,313-323 1bsg d1bsga_ A:68-86,165-172,241-254 2dns d2dnsc1 C:248-262,266-277,313-323 1h8z d1h8zb_ B:162-176,181-193,215-229 2efx d2efxd1 D:248-262,266-277,313-323 2efu d2efua1 A:248-262,266-277,313-323 1fof d1fofb_ B:162-176,181-193,215-229 1fof d1fofa_ A:162-176,181-193,215-229 1e3u d1e3uc_ C:162-176,181-193,215-229 2efu d2efue1 E:248-262,266-277,313-323 1e3u d1e3ub_ B:162-176,181-193,215-229 2efx d2efxc1 C:248-262,266-277,313-323 1k6r d1k6ra_ A:162-176,181-193,215-229 2drw d2drwc1 C:248-262,266-277,313-323 2drw d2drwb1 B:248-262,266-277,313-323 2efu d2efub1 B:248-262,266-277,313-323 1k6s d1k6sa_ A:162-176,181-193,215-229 2efx d2efxe1 E:248-262,266-277,313-323 1e3u d1e3ua_ A:162-176,181-193,215-229 1k6s d1k6sb_ B:162-176,181-193,215-229 1k56 d1k56d_ D:162-176,181-193,215-229 1k4f d1k4fb_ B:162-176,181-193,215-229 2dns d2dnse1 E:248-262,266-277,313-323 1k6r d1k6rb_ B:162-176,181-193,215-229 1e4d d1e4dd_ D:162-176,181-193,215-229 1k56 d1k56b_ B:162-176,181-193,215-229 1k4f d1k4fa_ A:162-176,181-193,215-229 1ewz d1ewzd_ D:162-176,181-193,215-229 2drw d2drwe1 E:248-262,266-277,313-323 2efx d2efxb1 B:248-262,266-277,313-323 1alq d1alqa_ A:68-87,165-172,242-252 1k55 d1k55d_ D:162-176,181-193,215-229 2drw d2drwa1 A:248-262,266-277,313-323 1ewz d1ewzb_ B:162-176,181-193,215-229 1e4d d1e4dc_ C:162-176,181-193,215-229 1ewz d1ewza_ A:162-176,181-193,215-229 2efx d2efxa1 A:248-262,266-277,313-323 1k57 d1k57d_ D:162-176,181-193,215-229 1k55 d1k55a_ A:162-176,181-193,215-229 1k56 d1k56c_ C:162-176,181-193,215-229 1k54 d1k54d_ D:162-176,181-193,215-229 1e4d d1e4db_ B:162-176,181-193,215-229 2dns d2dnsa1 A:248-262,266-277,313-323 1ewz d1ewzc_ C:162-176,181-193,215-229 1k55 d1k55c_ C:162-176,181-193,215-229 1k56 d1k56a_ A:162-176,181-193,215-229 1k55 d1k55b_ B:162-176,181-193,215-229 1k54 d1k54b_ B:162-176,181-193,215-229 1e4d d1e4da_ A:162-176,181-193,215-229 2efu d2efuf1 F:248-262,266-277,313-323 1k54 d1k54c_ C:162-176,181-193,215-229 1k57 d1k57c_ C:162-176,181-193,215-229 1k54 d1k54a_ A:162-176,181-193,215-229 1k4e d1k4ea_ A:162-176,181-193,215-229 1k57 d1k57b_ B:162-176,181-193,215-229 1k4e d1k4eb_ B:162-176,181-193,215-229 2drw d2drwf1 F:248-262,266-277,313-323 1k57 d1k57a_ A:162-176,181-193,215-229 2efx d2efxf1 F:248-262,266-277,313-323 2efx d2efxf1 F:58-77,266-277,313-323 2dns d2dnsf1 F:248-262,266-277,313-323 1iyo d1iyoa_ A:68-88,165-172,242-252 1iyp d1iypa_ A:68-88,165-172,242-252 1bza d1bzaa_ A:68-88,165-172,242-252 1iys d1iysa_ A:68-88,165-172,242-252 1hzo d1hzob_ B:68-88,165-172,242-252 1hzo d1hzoa_ A:68-88,165-172,242-252 41. c.1.19 Cobalamin (vitamin B12)-dependent enzymes TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 1xrs d1xrsa_ A:296-305,305-328,333-341 1e1c d1e1cb1 B:237-245,247-270,280-287 7req d7reqb1 B:237-245,247-270,280-287 1e1c d1e1cd1 D:237-245,247-270,280-287 1req d1reqd1 D:237-245,247-270,280-287 5req d5reqd1 D:237-245,247-270,280-287 2req d2reqd1 D:237-245,247-270,280-287 4req d4reqd1 D:237-245,247-270,280-287 3req d3reqb1 B:237-245,247-270,280-287 2req d2reqb1 B:237-245,247-270,280-287 6req d6reqd1 D:237-245,247-270,280-287 6req d6reqb1 B:237-245,247-270,280-287 5req d5reqb1 B:237-245,247-270,280-287 1req d1reqb1 B:237-245,247-270,280-287 4req d4reqb1 B:237-245,247-270,280-287 7req d7reqd1 D:237-245,247-270,280-287 1ccw d1ccwd_ D:173-182,225-244,246-254 1i9c d1i9cb_ B:173-182,225-244,246-254 1cb7 d1cb7b_ B:173-182,225-244,246-254 1ccw d1ccwb_ B:173-182,225-244,246-254 1i9c d1i9cd_ D:173-182,225-244,246-254 1cb7 d1cb7d_ D:173-182,225-244,246-254 1e1c d1e1cc1 C:241-249,251-274,283-291 3req d3reqa1 A:241-249,251-274,285-291 1e1c d1e1ca1 A:241-249,251-274,283-291 2req d2reqc1 C:241-249,251-274,285-291 4req d4reqa1 A:241-249,251-274,283-291 1req d1reqa1 A:241-249,251-274,283-291 7req d7reqc1 C:241-249,251-274,283-291 5req d5reqa1 A:241-249,251-274,283-291 4req d4reqc1 C:241-249,251-274,284-291 7req d7reqa1 A:241-249,251-274,283-291 6req d6reqa1 A:241-249,251-274,284-291 5req d5reqc1 C:241-249,251-274,284-291 2req d2reqa1 A:241-249,251-274,285-291 6req d6reqc1 C:241-249,251-274,284-291 1req d1reqc1 C:241-249,251-274,283-291 6req d6reqb1 B:200-209,247-270,280-287 1e1c d1e1cb1 B:200-209,247-270,280-287 4req d4reqb1 B:200-209,247-270,280-287 1req d1reqb1 B:200-209,247-270,280-287 7req d7reqb1 B:200-209,247-270,280-287 1e1c d1e1cd1 D:200-209,247-270,280-287 4req d4reqd1 D:200-209,247-270,280-287 5req d5reqb1 B:200-209,247-270,280-287 5req d5reqd1 D:200-209,247-270,280-287 2req d2reqb1 B:200-209,247-270,280-287 2req d2reqd1 D:200-209,247-270,280-287 1req d1reqd1 D:200-209,247-270,280-287 3req d3reqb1 B:200-209,247-270,280-287 1iwp d1iwpl_ L:262-270,276-292,294-300 1iwp d1iwpa_ A:262-270,276-292,294-300 1mmf d1mmfa_ A:262-270,276-292,294-300 4req d4reqb1 B:200-209,213-228,234-238 5req d5reqb1 B:200-209,213-228,234-238 4req d4reqd1 D:200-209,213-228,234-238 43. d.81.1 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain N-terminal domain is the classic Rossmann-fold ! FwdE/GAPDH domain-like core: alpha-beta-alpha-beta(3); mixed sheet: 2134, strand 2 is parallel to strand 1 1hdg d1hdgo2 O:154-166,251-268,270-275 3gpd d3gpdr2 R:156-168,253-270,272-277 1hdg d1hdgq2 Q:154-166,251-268,270-275 1dbv d1dbvo2 O:154-166,251-268,289-294 3dbv d3dbvp2 P:154-166,251-268,270-275 1rm5 d1rm5b2 B:154-166,251-268,270-275 1dbv d1dbvr2 R:154-166,251-268,289-294 4dbv d4dbvo2 O:154-166,251-268,289-294 1dbv d1dbvp2 P:154-166,251-268,289-294 4dbv d4dbvr2 R:154-166,251-268,289-294 3gpd d3gpdr2 R:156-168,253-270,291-296 2pkr d2pkri2 I:154-166,251-268,270-275 1rm4 d1rm4o2 O:154-166,251-268,270-275 2pkr d2pkrp2 P:154-166,251-268,270-275 2pkr d2pkrl2 L:154-166,251-268,270-275 3dbv d3dbvp2 P:154-166,251-268,289-294 1gd1 d1gd1o2 O:154-166,251-268,289-294 2pkr d2pkrb2 B:154-166,251-268,270-275 4dbv d4dbvr2 R:154-166,251-268,270-275 1dbv d1dbvo2 O:154-166,251-268,270-275 1jn0 d1jn0a2 A:154-166,251-268,289-294 1dbv d1dbvr2 R:154-166,251-268,270-275 2dbv d2dbvp2 P:154-166,251-268,289-294 1jn0 d1jn0b2 B:154-166,251-268,289-294 1jn0 d1jn0o2 O:154-166,251-268,289-294 2gd1 d2gd1r2 R:154-166,251-268,270-275 2dbv d2dbvp2 P:154-166,251-268,270-275 1dbv d1dbvp2 P:154-166,251-268,270-275 4dbv d4dbvo2 O:154-166,251-268,270-275 1rm3 d1rm3o2 O:154-166,251-268,289-294 2pkr d2pkri2 I:154-166,251-268,289-294 2gd1 d2gd1r2 R:154-166,251-268,289-294 2pkr d2pkrb2 B:154-166,251-268,289-294 2pkr d2pkrl2 L:154-166,251-268,289-294 1gd1 d1gd1o2 O:154-166,251-268,270-275 2pkr d2pkrq2 Q:154-166,251-268,289-294 1rm4 d1rm4o2 O:154-166,251-268,289-294 2pkr d2pkrp2 P:154-166,251-268,289-294 1hdg d1hdgo2 O:154-166,251-268,289-294 1rm5 d1rm5a2 A:154-166,251-268,289-294 1rm5 d1rm5b2 B:154-166,251-268,289-294 1rm5 d1rm5o2 O:154-166,251-268,289-294 1hdg d1hdgq2 Q:154-166,251-268,289-294 2q49 d2q49b2 B:170-179,268-283,305-313 2cvo d2cvoc2 C:225-235,324-339,361-369 2q49 d2q49d2 D:169-179,268-281,305-313 2cvo d2cvob2 B:225-235,324-339,361-369 2q49 d2q49c2 C:170-179,268-281,305-313 1rm4 d1rm4b2 B:156-166,251-268,270-275 2cvo d2cvoa2 A:218-229,324-340,361-369 3gpd d3gpdg2 G:150-168,253-270,272-277 1gpd d1gpdg2 G:148-166,251-266,270-275 1ihx d1ihxd2 D:148-166,251-268,270-275 1ihx d1ihxc2 C:148-166,251-268,270-275 1ihx d1ihxa2 A:148-166,251-268,270-275 1ihx d1ihxb2 B:148-166,251-268,270-275 2pkr d2pkra2 A:148-166,251-268,270-275 1crw d1crwg2 G:148-166,251-268,270-275 2pkr d2pkrh2 H:148-166,251-268,270-275 1dc5 d1dc5a2 A:148-166,251-268,270-275 1ihy d1ihyd2 D:148-166,251-268,270-275 1ihy d1ihya2 A:148-166,251-268,270-275 1ihy d1ihyb2 B:148-166,251-268,270-275 1ihy d1ihyc2 C:148-166,251-268,270-275 2pkr d2pkrm2 M:148-166,251-268,270-275 1crw d1crwr2 R:148-166,251-268,270-275 2b4r d2b4rq2 Q:152-170,257-274,276-281 1gad d1gado2 O:148-166,251-268,270-275 1dss d1dssr2 R:148-166,251-268,270-275 2pkr d2pkrc2 C:148-166,251-268,270-275 1szj d1szjg2 G:148-166,251-268,270-275 1dss d1dssg2 G:148-166,251-268,270-275 4gpd d4gpd22 2:147-165,250-267,269-274 1dc5 d1dc5b2 B:148-166,251-268,270-275 2pkr d2pkro2 O:148-166,251-268,270-275 1b7g d1b7go2 O:138-156,232-243,277-282 3dbv d3dbvr2 R:148-166,251-268,270-275 1gae d1gaeo2 O:148-166,251-268,270-275 2vyv d2vyva2 A:147-165,250-267,269-274 1u8f d1u8fo2 O:151-169,254-271,273-278 2pkr d2pkrr2 R:148-166,251-268,270-275 2vyn d2vynb2 B:147-165,250-267,269-274 1znq d1znqp2 P:151-169,254-271,273-278 2vyn d2vyna2 A:147-165,250-267,269-274 2hki d2hkia2 A:152-170,254-271,273-278 2pkr d2pkrd2 D:148-166,251-268,270-275 1j0x d1j0xq2 Q:148-166,251-268,270-275 1szj d1szjr2 R:148-166,251-268,270-275 1nqa d1nqaq2 Q:148-166,251-268,270-275 1s7c d1s7ca2 A:149-167,252-269,271-276 1znq d1znqr2 R:151-169,254-271,273-278 1znq d1znqo2 O:151-169,254-271,273-278 1dc6 d1dc6b2 B:148-166,251-268,270-275 1j0x d1j0xo2 O:148-166,251-268,270-275 1j0x d1j0xr2 R:148-166,251-268,270-275 1u8f d1u8fr2 R:151-169,254-271,273-278 1znq d1znqq2 Q:151-169,254-271,273-278 1j0x d1j0xp2 P:148-166,251-268,270-275 2gd1 d2gd1o2 O:148-166,251-268,270-275 1gae d1gaep2 P:148-166,251-268,270-275 1npt d1nptq2 Q:148-166,251-268,270-275 2gd1 d2gd1p2 P:148-166,251-268,270-275 1b7g d1b7gq2 Q:138-156,232-243,277-282 2vyn d2vync2 C:147-165,250-267,269-274 2dbv d2dbvr2 R:148-166,251-268,270-275 2vyv d2vyvb2 B:147-165,250-267,269-274 4gpd d4gpd12 1:147-165,250-267,269-274 1u8f d1u8fp2 P:151-169,254-271,273-278 1dc3 d1dc3a2 A:148-166,251-268,270-275 1nqo d1nqoc2 C:148-166,251-268,270-275 1nqa d1nqap2 P:148-166,251-268,270-275 4gpd d4gpd22 2:147-165,250-267,288-293 1nqa d1nqar2 R:148-166,251-268,270-275 3gpd d3gpdg2 G:150-168,253-270,291-296 2b4t d2b4tq2 Q:152-170,257-274,276-281 1npt d1npto2 O:148-166,251-268,270-275 1rm4 d1rm4a2 A:148-166,251-268,270-275 3dbv d3dbvo2 O:148-166,251-268,270-275 1nqo d1nqoq2 Q:148-166,251-268,270-275 2vyv d2vyvc2 C:147-165,250-267,269-274 1dc3 d1dc3b2 B:148-166,251-268,270-275 2b4r d2b4rr2 R:152-170,257-274,276-281 2b4t d2b4tr2 R:152-170,257-274,276-281 1npt d1nptp2 P:148-166,251-268,270-275 2gd1 d2gd1q2 Q:148-166,251-268,270-275 1u8f d1u8fq2 Q:151-169,254-271,273-278 2g82 d2g82r2 R:148-166,250-267,269-274 1nq5 d1nq5a2 A:148-166,251-268,270-275 1gad d1gadp2 P:148-166,251-268,270-275 2b4t d2b4to2 O:152-170,257-274,276-281 1cer d1cerc2 C:148-166,251-268,270-275 1cer d1cerq2 Q:148-166,251-268,270-275 4dbv d4dbvq2 Q:148-166,251-268,270-275 2b4t d2b4tp2 P:152-170,257-274,276-281 1gd1 d1gd1r2 R:148-166,251-268,270-275 1dc4 d1dc4a2 A:148-166,251-268,270-275 1npt d1nptr2 R:148-166,251-268,270-275 1ywg d1ywgp2 P:152-170,257-274,276-281 2b4r d2b4ro2 O:152-170,257-274,276-281 1ywg d1ywgo2 O:152-170,257-274,276-281 1dc6 d1dc6a2 A:148-166,251-268,270-275 2g82 d2g82d2 D:148-166,250-267,269-274 4gpd d4gpd42 4:147-165,250-267,269-274 1nq5 d1nq5o2 O:148-166,251-268,270-275 1nqa d1nqao2 O:148-166,251-268,270-275 1ywg d1ywgr2 R:152-170,257-274,276-281 1ywg d1ywgq2 Q:152-170,257-274,276-281 2b4r d2b4rp2 P:152-170,257-274,276-281 1nq5 d1nq5q2 Q:148-166,251-268,270-275 2g82 d2g82o2 O:148-166,250-267,269-274 2g82 d2g82b2 B:148-166,250-267,269-274 1nqo d1nqoa2 A:148-166,251-268,270-275 1gd1 d1gd1p2 P:148-166,251-268,270-275 1dbv d1dbvq2 Q:148-166,251-268,270-275 2g82 d2g82c2 C:148-166,250-267,269-274 1nq5 d1nq5c2 C:148-166,251-268,270-275 1nqo d1nqoo2 O:148-166,251-268,270-275 2g82 d2g82p2 P:148-166,250-267,269-274 1dc5 d1dc5a2 A:148-166,251-268,289-294 1gd1 d1gd1q2 Q:148-166,251-268,270-275 2g82 d2g82q2 Q:148-166,250-267,269-274 2g82 d2g82a2 A:148-166,250-267,269-274 1ihx d1ihxb2 B:148-166,251-268,289-294 2cvo d2cvod2 D:218-229,324-339,361-369 1dc4 d1dc4b2 B:148-166,251-268,270-275 1ihy d1ihyd2 D:148-166,251-268,289-294 4gpd d4gpd32 3:147-165,250-267,269-274 1cer d1cerp2 P:148-166,251-268,270-275 1cer d1cerb2 B:148-166,251-268,270-275 1ihx d1ihxa2 A:148-166,251-268,289-294 1ihy d1ihyb2 B:148-166,251-268,289-294 1ihy d1ihya2 A:148-166,251-268,289-294 4dbv d4dbvp2 P:148-166,251-268,270-275 1dbv d1dbvq2 Q:148-166,251-268,289-294 1dc5 d1dc5b2 B:148-166,251-268,289-294 3dbv d3dbvo2 O:148-166,251-268,289-294 1crw d1crwg2 G:148-166,251-268,289-294 1ihy d1ihyc2 C:148-166,251-268,289-294 3cmc d3cmcq2 Q:148-166,251-268,270-275 2gd1 d2gd1p2 P:148-166,251-268,289-294 4gpd d4gpd42 4:147-165,250-267,288-293 1dc4 d1dc4a2 A:148-166,251-268,289-294 3cmc d3cmcp2 P:148-166,251-268,270-275 2gd1 d2gd1q2 Q:148-166,251-268,289-294 3cmc d3cmco2 O:148-166,251-268,270-275 1obf d1obfp2 P:153-171,255-272,274-279 1dc3 d1dc3a2 A:148-166,251-268,289-294 2hki d2hkia2 A:152-170,254-271,292-297 3cmc d3cmcr2 R:148-166,251-268,270-275 1gpd d1gpdr2 R:148-166,251-268,269-273 1dc3 d1dc3b2 B:148-166,251-268,289-294 2vyv d2vyva2 A:147-165,250-267,288-293 4gpd d4gpd32 3:147-165,250-267,288-293 1obf d1obfo2 O:153-171,255-272,274-279 1u8f d1u8fo2 O:151-169,254-271,292-297 1cer d1cerq2 Q:148-166,251-268,289-294 1cer d1cerc2 C:148-166,251-268,289-294 2b4t d2b4tq2 Q:152-170,257-274,295-300 2dbv d2dbvo2 O:148-166,251-268,270-275 1szj d1szjg2 G:148-166,251-268,289-294 1vc2 d1vc2a2 A:148-166,250-267,269-274 1dc6 d1dc6a2 A:148-166,251-268,289-294 2b4r d2b4rp2 P:152-170,257-274,295-300 4dbv d4dbvq2 Q:148-166,251-268,289-294 1u8f d1u8fr2 R:151-169,254-271,292-297 2vyv d2vyvc2 C:147-165,250-267,288-293 2b4t d2b4tr2 R:152-170,257-274,295-300 1j0x d1j0xr2 R:148-166,251-268,289-294 1szj d1szjr2 R:148-166,251-268,289-294 1j0x d1j0xq2 Q:148-166,251-268,289-294 1crw d1crwr2 R:148-166,251-268,289-294 1s7c d1s7ca2 A:149-167,252-269,290-295 1gd1 d1gd1r2 R:148-166,251-268,289-294 1cer d1cerr2 R:148-166,251-268,270-275 1cer d1cerd2 D:148-166,251-268,270-275 1gd1 d1gd1q2 Q:148-166,251-268,289-294 1gad d1gado2 O:148-166,251-268,289-294 1znq d1znqr2 R:151-169,254-271,292-297 1nqa d1nqaq2 Q:148-166,251-268,289-294 1dc6 d1dc6b2 B:148-166,251-268,289-294 1znq d1znqo2 O:151-169,254-271,292-297 4gpd d4gpd12 1:147-165,250-267,288-293 2b4r d2b4rq2 Q:152-170,257-274,295-300 1npt d1nptq2 Q:148-166,251-268,289-294 2dbv d2dbvr2 R:148-166,251-268,289-294 1j0x d1j0xo2 O:148-166,251-268,289-294 1j0x d1j0xp2 P:148-166,251-268,289-294 1cer d1cero2 O:148-166,251-268,270-275 1cer d1cera2 A:148-166,251-268,270-275 1znq d1znqp2 P:151-169,254-271,292-297 1nqa d1nqap2 P:148-166,251-268,289-294 1gd1 d1gd1p2 P:148-166,251-268,289-294 1dss d1dssg2 G:148-166,251-268,289-294 1u8f d1u8fp2 P:151-169,254-271,292-297 2vyn d2vync2 C:147-165,250-267,288-293 1dss d1dssr2 R:148-166,251-268,289-294 1ywg d1ywgr2 R:152-170,257-274,295-300 2pkq d2pkqs2 S:148-166,251-268,289-294 1znq d1znqq2 Q:151-169,254-271,292-297 1ihx d1ihxd2 D:148-166,251-268,289-294 1npt d1nptp2 P:148-166,251-268,289-294 1ywg d1ywgq2 Q:152-170,257-274,295-300 4dbv d4dbvp2 P:148-166,251-268,289-294 2gd1 d2gd1o2 O:148-166,251-268,289-294 1nqa d1nqar2 R:148-166,251-268,289-294 1nq5 d1nq5c2 C:148-166,251-268,289-294 1dc4 d1dc4b2 B:148-166,251-268,289-294 1ywg d1ywgp2 P:152-170,257-274,295-300 1nqo d1nqoc2 C:148-166,251-268,289-294 2b4t d2b4tp2 P:152-170,257-274,295-300 1ihx d1ihxc2 C:148-166,251-268,289-294 1ywg d1ywgo2 O:152-170,257-274,295-300 1nqo d1nqoq2 Q:148-166,251-268,289-294 2vyn d2vyna2 A:147-165,250-267,288-293 3dbv d3dbvr2 R:148-166,251-268,289-294 1nq5 d1nq5q2 Q:148-166,251-268,289-294 1gae d1gaeo2 O:148-166,251-268,289-294 1u8f d1u8fq2 Q:151-169,254-271,292-297 2pkq d2pkqr2 R:148-166,251-268,289-294 1npt d1nptr2 R:148-166,251-268,289-294 2vyn d2vynb2 B:147-165,250-267,288-293 2dbv d2dbvq2 Q:148-166,251-268,270-275 1gae d1gaep2 P:148-166,251-268,289-294 2vyv d2vyvb2 B:147-165,250-267,288-293 1cer d1cerp2 P:148-166,251-268,289-294 1cer d1cerb2 B:148-166,251-268,289-294 1rm4 d1rm4a2 A:148-166,251-268,289-294 2pkr d2pkra2 A:148-166,251-268,289-294 2pkq d2pkqp2 P:148-166,251-268,289-294 2g82 d2g82p2 P:148-166,250-267,288-293 2g82 d2g82r2 R:148-166,250-267,288-293 1gad d1gadp2 P:148-166,251-268,289-294 2g82 d2g82d2 D:148-166,250-267,288-293 1f06 d1f06b2 B:649-660,702-716,724-730 2dbv d2dbvo2 O:148-166,251-268,289-294 2g82 d2g82o2 O:148-166,250-267,288-293 2b4r d2b4rr2 R:152-170,257-274,295-300 2pkq d2pkqq2 Q:148-166,251-268,289-294 1nqo d1nqoa2 A:148-166,251-268,289-294 3dbv d3dbvq2 Q:148-166,251-268,270-275 2pkr d2pkrc2 C:148-166,251-268,289-294 2pkr d2pkrh2 H:148-166,251-268,289-294 1i33 d1i33a2 A:165-182,269-286,288-292 2pkr d2pkrd2 D:148-166,251-268,289-294 2pkr d2pkrm2 M:148-166,251-268,289-294 2pkq d2pkqt2 T:148-166,251-268,289-294 2pkq d2pkqo2 O:148-166,251-268,289-294 1nq5 d1nq5a2 A:148-166,251-268,289-294 3cmc d3cmcq2 Q:148-166,251-268,289-294 1npt d1npto2 O:148-166,251-268,289-294 2pkr d2pkro2 O:148-166,251-268,289-294 2g82 d2g82q2 Q:148-166,250-267,288-293 2b4t d2b4to2 O:152-170,257-274,295-300 2g82 d2g82a2 A:148-166,250-267,288-293 1cer d1cerd2 D:148-166,251-268,289-294 1cer d1cerr2 R:148-166,251-268,289-294 2pkr d2pkrr2 R:148-166,251-268,289-294 3cmc d3cmco2 O:148-166,251-268,289-294 3cmc d3cmcp2 P:148-166,251-268,289-294 3dbv d3dbvq2 Q:148-166,251-268,289-294 2g82 d2g82b2 B:148-166,250-267,288-293 1nqo d1nqoo2 O:148-166,251-268,289-294 2dbv d2dbvq2 Q:148-166,251-268,289-294 2g82 d2g82c2 C:148-166,250-267,288-293 3cmc d3cmcr2 R:148-166,251-268,289-294 1obf d1obfp2 P:153-171,255-272,293-298 1nqa d1nqao2 O:148-166,251-268,289-294 1gpd d1gpdg2 G:148-166,251-266,289-294 1nq5 d1nq5o2 O:148-166,251-268,289-294 1vc2 d1vc2a2 A:148-166,250-267,288-293 1dap d1dapb2 B:149-160,202-216,224-230 1i33 d1i33c2 C:165-182,269-286,288-292 2gz1 d2gz1b2 B:127-138,265-277,301-310 1i33 d1i33f2 F:165-182,269-286,288-292 1ml3 d1ml3c2 C:165-182,269-286,288-292 3dap d3dapb2 B:149-160,202-216,224-230 1cer d1cero2 O:148-166,251-268,289-294 1cer d1cera2 A:148-166,251-268,289-294 2b4r d2b4ro2 O:152-170,257-274,295-300 1i33 d1i33e2 E:165-182,269-286,288-292 1obf d1obfo2 O:153-171,255-272,293-298 1k3t d1k3ta2 A:165-182,269-286,288-292 1i33 d1i33b2 B:165-182,269-286,288-292 2czc d2czcb2 B:140-154,230-242,275-280 1ml3 d1ml3c2 C:165-182,269-286,307-311 1i33 d1i33a2 A:165-182,269-286,307-311 2cvo d2cvoa2 A:218-229,324-340,341-345 1a7k d1a7kb2 B:165-182,269-286,288-292 1qxs d1qxsd2 D:165-182,269-286,307-311 1a7k d1a7kc2 C:165-182,269-286,288-292 1i33 d1i33d2 D:165-182,269-286,288-292 2gz1 d2gz1a2 A:127-138,265-277,301-310 1i32 d1i32f2 F:165-182,269-286,288-292 2gyy d2gyyc2 C:127-138,265-277,301-310 1qxs d1qxsb2 B:165-182,269-286,307-311 2g17 d2g17a2 A:153-164,252-267,288-297 1a7k d1a7kd2 D:165-182,269-286,288-292 1i33 d1i33d2 D:165-182,269-286,307-311 1i32 d1i32b2 B:165-182,269-286,288-292 3dmt d3dmtb2 B:165-182,269-286,307-311 1i32 d1i32a2 A:165-182,269-286,288-292 1i32 d1i32e2 E:165-182,269-286,288-292 1k3t d1k3tb2 B:165-182,269-286,288-292 1rm3 d1rm3b2 B:156-166,251-268,289-294 1k3t d1k3tc2 C:165-182,269-286,307-311 1ml3 d1ml3b2 B:165-182,269-286,288-292 3dmt d3dmta2 A:165-182,269-286,288-292 1f06 d1f06a2 A:149-160,202-216,224-230 1k3t d1k3tc2 C:165-182,269-286,288-292 1gyp d1gypd2 D:165-182,269-286,288-292 1gyq d1gyqd2 D:165-182,269-286,288-292 1gyq d1gyqa2 A:165-182,269-286,288-292 1gyp d1gypa2 A:165-182,269-286,288-292 1ml3 d1ml3a2 A:165-182,269-286,288-292 1i32 d1i32c2 C:165-182,269-286,288-292 3dap d3dapa2 A:149-160,202-216,224-230 1qxs d1qxsc2 C:165-182,269-286,307-311 1qxs d1qxsa2 A:165-182,269-286,307-311 3dmt d3dmtd2 D:165-182,269-286,307-311 1i32 d1i32d2 D:165-182,269-286,288-292 1ml3 d1ml3a2 A:165-182,269-286,307-311 2gz2 d2gz2a2 A:127-138,265-277,301-310 1k3t d1k3ta2 A:165-182,269-286,307-311 2gz2 d2gz2b2 B:127-138,265-277,301-310 1ml3 d1ml3d2 D:165-182,269-286,307-311 1i32 d1i32e2 E:165-182,269-286,307-311 1i33 d1i33e2 E:165-182,269-286,307-311 1qxs d1qxsa2 A:165-182,269-286,288-292 3dmt d3dmta2 A:165-182,269-286,307-311 1a7k d1a7kd2 D:165-182,269-286,307-311 1i32 d1i32d2 D:165-182,269-286,307-311 3dmt d3dmtd2 D:165-182,269-286,288-292 1i32 d1i32a2 A:165-182,269-286,307-311 1ml3 d1ml3b2 B:165-182,269-286,307-311 2gz3 d2gz3c2 C:127-138,265-277,301-310 1vkn d1vkna2 A:144-155,248-264,285-295 1gyp d1gypb2 B:165-182,269-286,288-292 1gyq d1gyqb2 B:165-182,269-286,288-292 1k3t d1k3tb2 B:165-182,269-286,307-311 1gyq d1gyqa2 A:165-182,269-286,307-311 1gyp d1gypa2 A:165-182,269-286,307-311 1a7k d1a7kb2 B:165-182,269-286,307-311 1a7k d1a7ka2 A:165-182,269-286,288-292 1k3t d1k3td2 D:165-182,269-286,307-311 1a7k d1a7kc2 C:165-182,269-286,307-311 1i33 d1i33c2 C:165-182,269-286,307-311 1i32 d1i32f2 F:165-182,269-286,307-311 1i33 d1i33f2 F:165-182,269-286,307-311 1qxs d1qxsb2 B:165-182,269-286,288-292 1nbo d1nboa2 A:156-166,251-268,289-294 1i33 d1i33b2 B:165-182,269-286,307-311 3dmt d3dmtc2 C:165-182,269-286,307-311 1i32 d1i32c2 C:165-182,269-286,307-311 1i32 d1i32b2 B:165-182,269-286,307-311 1qxs d1qxsc2 C:165-182,269-286,288-292 1a7k d1a7ka2 A:165-182,269-286,307-311 1gyq d1gyqd2 D:165-182,269-286,307-311 1gyp d1gypd2 D:165-182,269-286,307-311 1gyp d1gypb2 B:165-182,269-286,307-311 1gyq d1gyqb2 B:165-182,269-286,307-311 1gyp d1gypc2 C:165-182,269-286,307-311 1gyq d1gyqc2 C:165-182,269-286,307-311 1vkn d1vkna2 A:144-155,248-264,265-269 1cf2 d1cf2o2 O:146-157,232-244,277-282 2cvo d2cvod2 D:218-229,324-339,341-345 2g17 d2g17a2 A:153-164,252-267,269-273 1t4d d1t4da2 A:134-145,287-300,326-335 1t4b d1t4ba2 A:134-145,287-300,326-335 1t4d d1t4db2 B:134-145,287-300,326-335 1t4b d1t4bb2 B:134-145,287-300,326-335 1t4d d1t4dc2 C:134-145,287-300,326-335 1gl3 d1gl3a2 A:134-145,287-300,326-335 1gl3 d1gl3b2 B:134-145,287-300,326-335 1brm d1brma2 A:134-145,287-300,326-335 1brm d1brmc2 C:134-145,287-300,326-335 1brm d1brmb2 B:134-145,287-300,326-335 1vkn d1vknc2 C:144-155,248-263,285-295 2gz1 d2gz1b2 B:127-138,265-277,278-282 1vkn d1vknb2 B:144-155,248-263,285-295 1vkn d1vknd2 D:144-155,248-263,285-295 2gyy d2gyyc2 C:127-138,265-277,278-282 2gz1 d2gz1a2 A:127-138,265-277,278-282 2gz2 d2gz2b2 B:127-138,265-277,278-282 2gz2 d2gz2a2 A:127-138,265-277,278-282 2gz3 d2gz3c2 C:127-138,265-277,278-282 1vkn d1vknc2 C:144-155,248-263,265-269 1vkn d1vknd2 D:144-155,248-263,265-269 1vkn d1vknb2 B:144-155,248-263,265-269 1gl3 d1gl3b2 B:134-145,287-300,301-305 1gl3 d1gl3a2 A:134-145,287-300,301-305 1t4d d1t4db2 B:134-145,287-300,301-305 1brm d1brmb2 B:134-145,287-300,301-305 1t4d d1t4da2 A:134-145,287-300,301-305 1brm d1brmc2 C:134-145,287-300,301-305 1brm d1brma2 A:134-145,287-300,301-305 1t4b d1t4bb2 B:134-145,287-300,301-305 44. d.58.30 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK common fold is elaborated with additional secondary structures ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1eq0 d1eq0a_ A:15-28,65-82,93-102 1kbr d1kbra_ A:13-29,65-81,93-102 1cbk d1cbka_ A:14-29,66-82,93-102 1ex8 d1ex8a_ A:13-28,65-81,93-102 1cbk d1cbkb_ B:14-29,66-82,93-102 1g4c d1g4ca_ A:13-28,65-82,93-102 1hq2 d1hq2a_ A:13-28,65-81,93-102 1q0n d1q0na_ A:13-28,65-81,93-102 1f9h d1f9ha_ A:13-28,65-81,93-102 1dy3 d1dy3a_ A:13-28,65-81,93-102 2f63 d2f63a1 A:13-28,65-81,93-102 2f65 d2f65a1 A:13-27,65-82,91-102 1g4c d1g4cb_ B:213-228,265-283,293-302 1im6 d1im6a_ A:13-28,65-81,93-102 1rb0 d1rb0a_ A:13-28,65-82,93-102 1rtz d1rtza_ A:13-28,65-82,93-102 1ru1 d1ru1b_ B:213-228,265-281,294-302 1hka d1hkaa_ A:13-28,65-82,94-102 1ru1 d1ru1a_ A:13-28,65-82,94-102 1ru2 d1ru2a_ A:13-28,65-81,93-102 1rao d1raoa_ A:13-28,65-82,87-102 1eqm d1eqma_ A:13-28,65-82,87-102 45. e.69.1 Poly(A) polymerase catalytic subunit-like Central domain d2 is distantly related to the nucleotidyltransferase superfamily (scop_sf 81301) Poly(A) polymerase catalytic subunit-like 3 domains; d1: all-alpha, contains HhH motif; d2: alpha+beta of nucleotidyltransferase fold (scop_cf 81302); d3: [alpha+beta; beta(3)-alpha-beta(3)-alpha(2); 3 layers: a/b/a; mixed beta-sheet of 6 strands, order 123654, strands 2 and 5 are antiparallel to the rest 2ga9 d2ga9d1 D:162-180,209-226,248-257 2gaf d2gafd1 D:162-180,209-226,248-257 48. d.382.1 PSTPO5379-like PSTPO5379-like complex fold; consists of two alpha+beta subdomains, one is inserted in the other 2pif d2pifb1 B:46-61,232-244,246-252 2pif d2pifa1 A:46-61,232-244,246-252 49. d.64.2 TM1457-like forms a homodimer via alpha-helical interface ! eIF1-like beta(2)-alpha-beta(2)-alpha-beta; 2 layers: alpha/beta; mixed beta-sheet: order 51243 2p92 d2p92b1 B:33-53,76-98,100-106 2p92 d2p92a1 A:32-52,76-98,101-106 1s12 d1s12c_ C:219-241,260-282,285-290 1s12 d1s12b_ B:119-141,160-182,185-190 1s12 d1s12a_ A:19-41,60-82,85-90 1s12 d1s12d_ D:319-341,360-382,385-390 2g0j d2g0jd1 D:26-52,79-101,103-111 2g0j d2g0jc1 C:26-52,79-101,103-111 2g0j d2g0jb1 B:26-52,79-101,103-111 2g0j d2g0ja1 A:26-52,79-101,103-111 2g0i d2g0ib1 B:26-52,79-101,103-111 2g0i d2g0ia1 A:26-52,79-101,103-111 2idl d2idla1 A:28-53,77-103,105-112 2idl d2idlb1 B:27-53,77-103,105-113 50. d.17.4 NTF2-like has a beta-alpha(2)-beta insertion after the main helix ! Cystatin-like Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet 1z1s d1z1sa1 A:2-17,18-27,110-120 1nu3 d1nu3a_ A:22-38,39-48,125-134 1s5a d1s5aa_ A:4-23,24-33,117-126 1nww d1nwwa_ A:22-38,39-48,125-134 1nww d1nwwb_ B:22-38,39-48,125-134 1nu3 d1nu3b_ B:22-38,39-48,125-134 1s5a d1s5ac_ C:4-23,24-33,117-126 1m98 d1m98a2 A:197-210,211-220,298-309 1m98 d1m98b2 B:197-210,211-220,298-309 1ohp d1ohpb1 B:203-221,222-231,307-316 3ebt d3ebta1 A:2-18,19-28,111-120 1ohs d1ohsd1 D:203-221,222-231,307-316 1ohp d1ohpd1 D:203-221,222-231,307-316 1ogz d1ogza_ A:3-21,22-31,107-116 1qjg d1qjga_ A:3-21,22-31,107-116 1ocv d1ocva_ A:3-21,22-31,107-116 1ohp d1ohpc1 C:3-21,22-31,107-116 2z7a d2z7aa1 A:7-23,24-33,119-128 1ocv d1ocvc_ C:403-421,422-431,507-516 2z77 d2z77b1 B:7-23,24-33,119-128 1ohp d1ohpa1 A:3-21,22-31,107-116 1ohs d1ohsc1 C:3-21,22-31,107-116 1e3r d1e3ra_ A:5-23,24-33,111-120 1w00 d1w00a1 A:5-23,24-33,111-120 1oh0 d1oh0a_ A:5-23,24-33,111-120 2a15 d2a15a1 A:7-23,24-33,119-128 1w00 d1w00b1 B:5-23,24-33,111-120 1k41 d1k41a_ A:5-23,24-33,111-120 2z77 d2z77d1 D:7-23,24-33,119-128 2z7a d2z7ac1 C:7-23,24-33,119-128 2z7a d2z7ab1 B:7-23,24-33,119-128 1oh0 d1oh0b_ B:205-223,224-233,311-320 2z77 d2z77c1 C:7-23,24-33,119-128 1vzz d1vzza_ A:5-23,24-33,111-120 1vzz d1vzzb_ B:5-23,24-33,111-120 2z7a d2z7ad1 D:7-23,24-33,119-128 2inx d2inxa1 A:5-23,24-33,111-120 1w01 d1w01b_ B:205-223,224-233,311-320 2z76 d2z76a1 A:7-23,24-33,119-128 3cpo d3cpoa1 A:5-23,24-33,111-120 1e3v d1e3vb_ B:5-23,24-33,111-120 1ogx d1ogxa_ A:5-23,24-33,111-120 1e3r d1e3rb_ B:5-23,24-33,111-120 1dmq d1dmqa_ A:5-23,24-33,111-120 1cqs d1cqsa_ A:5-23,24-33,111-120 1c7h d1c7ha_ A:5-23,24-33,111-120 1e3v d1e3va_ A:5-23,24-33,111-120 1w02 d1w02a_ A:5-23,24-33,111-120 1opy d1opya_ A:5-23,24-33,111-120 1k41 d1k41b_ B:205-223,224-233,311-320 1gs3 d1gs3a_ A:5-23,24-33,111-120 1w6y d1w6ya1 A:5-23,24-33,111-120 1cqs d1cqsb_ B:205-223,224-233,311-320 1ogx d1ogxb_ B:205-223,224-233,311-320 2bng d2bnga1 A:13-31,32-41,115-124 2f99 d2f99c1 C:2-18,19-27,114-124 2f99 d2f99a1 A:2-18,19-27,114-124 2bng d2bngb1 B:12-31,32-41,115-124 2fxt d2fxta1 A:296-308,309-317,416-425 2bng d2bngc1 C:12-31,32-41,115-124 2gxf d2gxfb1 B:1-19,20-29,112-123 2gxf d2gxfa1 A:1-19,20-29,112-123 1s5a d1s5ab_ B:-2-23,24-33,117-126 2gxf d2gxfd1 D:1-19,20-29,112-123 1mws d1mwsb1 B:27-40,41-49,121-126 3bb9 d3bb9e1 E:29-45,46-55,137-147 2gxf d2gxfc1 C:1-19,20-29,112-123 3ec9 d3ec9a1 A:12-27,28-36,119-129 1mwt d1mwta1 A:27-40,41-49,121-126 1mwt d1mwtb1 B:27-40,41-49,121-126 3er7 d3er7a1 A:5-18,20-32,110-120 1mwu d1mwub1 B:27-40,41-49,121-126 1vqq d1vqqb1 B:27-40,41-49,121-126 1mwu d1mwua1 A:27-40,41-49,121-126 3dm8 d3dm8a1 A:4-20,21-30,114-124 3ec9 d3ec9b1 B:12-27,28-36,119-129 2z77 d2z77a1 A:7-23,24-32,119-128 1mws d1mwsa1 A:27-40,41-49,121-126 1vqq d1vqqa1 A:27-40,41-49,121-126 1gyb d1gybd_ D:6-24,23-32,110-122 1mwr d1mwrb1 B:27-40,41-49,121-126 1gy7 d1gy7d_ D:6-24,23-32,110-122 2cw9 d2cw9a1 A:322-334,335-343,437-448 2z76 d2z76b1 B:7-23,24-32,119-128 1mwr d1mwra1 A:27-40,41-49,121-126 3er7 d3er7b1 B:5-20,20-32,110-120 2k54 d2k54a1 A:2-19,20-29,104-119 1u5o d1u5oa_ A:5-26,25-34,110-122 1gyb d1gybc_ C:5-24,23-32,110-122 1gy7 d1gy7c_ C:6-24,23-32,110-123 3dmc d3dmcb1 B:7-27,28-36,117-128 1zo2 d1zo2a1 A:9-29,28-37,114-126 3dmc d3dmca1 A:7-27,28-36,117-128 1gy6 d1gy6a_ A:5-26,25-34,110-122 1tuh d1tuha_ A:19-38,39-48,129-139 1gy7 d1gy7a_ A:4-24,23-32,110-122 1gyb d1gyba_ A:4-24,23-32,110-122 3d9r d3d9ra1 A:7-26,27-36,120-133 1jb2 d1jb2a_ A:5-26,25-34,110-122 1zx2 d1zx2b1 B:4-24,23-32,130-142 1jb4 d1jb4b_ B:5-26,25-34,110-122 3dxo d3dxob1 B:1-17,19-32,106-117 2qiy d2qiya1 A:4-24,23-32,130-141 1gy7 d1gy7b_ B:3-24,23-32,110-122 1buq d1buqb_ B:203-221,222-231,309-316 1jb5 d1jb5a_ A:5-26,25-34,110-123 3dxo d3dxoa1 A:1-17,19-32,106-117 3b8l d3b8la1 A:4-25,27-36,122-133 1q40 d1q40b_ B:305-324,323-332,488-501 1gyb d1gybb_ B:3-24,23-32,110-122 2i9w d2i9wa1 A:51-66,67-76,147-153 1of5 d1of5a_ A:278-296,295-304,456-470 1jb2 d1jb2b_ B:5-26,25-34,110-122 1buq d1buqa_ A:3-21,22-31,110-116 1jb4 d1jb4a_ A:5-26,25-34,110-123 3b8l d3b8ld1 D:4-25,27-36,122-133 3b8l d3b8lb1 B:4-25,27-36,122-133 3b8l d3b8lc1 C:4-25,27-36,122-133 3b8l d3b8le1 E:4-25,27-36,122-133 3b8l d3b8lf1 F:4-25,27-36,122-133 2r4i d2r4id1 D:6-21,22-31,109-121 3d9r d3d9rb1 B:6-26,27-36,120-133 3d9r d3d9rc1 C:6-26,27-36,120-133 1jn5 d1jn5b_ B:380-401,402-411,525-539 2cc3 d2cc3a1 A:92-112,116-129,216-227 2bhm d2bhma1 A:97-116,121-134,223-234 1jkg d1jkgb_ B:380-401,402-411,525-539 2b24 d2b24d1 D:515-536,537-545,654-666 2b24 d2b24f1 F:515-536,537-545,654-666 2b24 d2b24b1 B:515-536,537-545,654-666 2cc3 d2cc3b1 B:92-112,113-128,216-227 3d9r d3d9rd1 D:6-26,27-36,120-133 2r4i d2r4ic1 C:2-21,22-31,109-121 2imj d2imjb1 B:15-33,34-43,119-133 2bhm d2bhmc1 C:97-116,118-133,223-234 2rgq d2rgqa1 A:4-25,26-35,115-127 2bhm d2bhmd1 D:97-116,118-133,223-234 2rgq d2rgqb1 B:4-25,26-35,115-127 2imj d2imjd1 D:15-33,34-43,119-133 2imj d2imjc1 C:15-33,34-43,119-133 2bhm d2bhme1 E:97-116,118-134,223-234 2bhm d2bhmb1 B:97-116,118-134,223-234 1ndo d1ndod_ D:527-548,549-558,669-680 1ndo d1ndof_ F:527-548,549-558,669-680 1o7m d1o7mb_ B:527-548,549-558,669-680 1uuv d1uuvb1 B:527-548,549-558,669-680 1ndo d1ndob_ B:527-548,549-558,669-680 1uuw d1uuwb1 B:527-548,549-558,669-680 1eg9 d1eg9b_ B:527-548,549-558,669-680 1std d1stda_ A:12-33,34-42,140-154 2rgq d2rgqc1 C:4-25,26-35,115-127 1o7g d1o7gb_ B:527-548,549-558,669-680 2hml d2hmlb1 B:27-48,49-58,169-180 2hmn d2hmnb1 B:27-48,49-58,169-180 2hmk d2hmkb1 B:27-48,49-58,169-180 1o7p d1o7pb_ B:527-548,549-558,669-680 2hmj d2hmjb1 B:27-48,49-58,169-180 2hmm d2hmmb1 B:27-48,49-58,169-180 2hmo d2hmob1 B:27-48,49-58,169-180 2b1x d2b1xf1 F:515-536,537-546,654-666 2b1x d2b1xb1 B:515-536,537-546,654-666 2b1x d2b1xd1 D:515-536,537-546,654-666 3blz d3blzd1 D:5-27,28-37,112-124 3std d3stdc_ C:12-33,34-42,140-156 3blz d3blzc1 C:5-27,28-37,112-124 4std d4stdc_ C:12-33,34-42,140-156 3blz d3blza1 A:5-27,28-37,112-124 2chc d2chcc1 C:7-28,29-38,118-130 3blz d3blzl1 L:5-27,28-37,112-124 3blz d3blzj1 J:5-27,28-37,112-124 3blz d3blzh1 H:5-27,28-37,112-124 4std d4stdb_ B:12-33,34-42,140-156 3blz d3blze1 E:5-27,28-37,112-124 5std d5stda_ A:12-33,34-42,140-156 7std d7stda_ A:12-33,34-42,140-156 5std d5stdc_ C:12-33,34-42,140-156 3blz d3blzf1 F:5-27,28-37,112-124 3std d3stda_ A:12-33,34-42,140-156 3std d3stdb_ B:12-33,34-42,140-156 6std d6stdc_ C:12-33,34-42,140-156 5std d5stdb_ B:12-33,34-42,140-156 3blz d3blzi1 I:5-27,28-37,112-124 6std d6stda_ A:12-33,34-42,140-156 3blz d3blzg1 G:5-27,28-37,112-124 3blz d3blzk1 K:5-27,28-37,112-124 3blz d3blzb1 B:5-27,28-37,112-124 7std d7stdb_ B:12-33,34-42,140-156 1idp d1idpc_ C:12-33,34-42,140-155 6std d6stdb_ B:12-33,34-42,140-156 4std d4stda_ A:12-33,34-42,140-156 7std d7stdc_ C:12-33,34-42,140-156 3cnx d3cnxb1 B:6-27,28-37,143-155 2rgq d2rgqa1 A:4-25,26-35,38-43 1idp d1idpb_ B:12-33,34-42,140-155 1idp d1idpa_ A:12-33,34-42,140-155 2rgq d2rgqb1 B:4-25,26-35,38-43 2std d2stda_ A:12-33,34-42,140-154 1hkx d1hkxb_ B:340-364,365-374,460-472 3cnx d3cnxa1 A:5-27,28-37,143-155 3cnx d3cnxc1 C:5-27,28-37,143-155 2chc d2chcb1 B:6-28,29-38,118-130 2chc d2chca1 A:2-28,29-38,118-130 2rfr d2rfra1 A:3-34,35-44,129-141 1of5 d1of5b_ B:14-33,38-46,165-177 3ef8 d3ef8b1 B:1-26,27-36,120-136 3ef8 d3ef8a1 A:1-26,27-36,120-136 51. d.98.1 beta-lactamase-inhibitor protein, BLIP BLIP-like alpha(2)-beta(4); 2 layers: alpha/beta 2b5r d2b5rd1 D:1005-1013,1017-1026,1052-1060 2b5r d2b5rc1 C:1005-1013,1017-1026,1051-1060 2g2w d2g2wb1 B:5-13,17-26,51-60 1jtg d1jtgb_ B:5-13,17-26,49-60 1jtg d1jtgd_ D:5-13,17-26,49-60 1s0w d1s0wc_ C:1005-1013,1017-1026,1049-1060 1s0w d1s0wd_ D:1005-1013,1017-1026,1049-1060 2g2u d2g2ub1 B:5-13,17-26,49-60 2b5r d2b5rd1 D:1084-1092,1096-1105,1145-1153 2g2u d2g2ub1 B:84-92,96-105,145-153 1jtg d1jtgb_ B:84-92,96-105,145-153 2g2w d2g2wb1 B:84-92,96-105,145-153 2b5r d2b5rc1 C:1084-1092,1096-1105,1145-1153 1jtg d1jtgd_ D:84-92,96-105,145-153 1s0w d1s0wd_ D:1084-1092,1096-1105,1145-1153 1s0w d1s0wc_ C:1084-1092,1096-1105,1145-1153 53. d.96.1 Tetrahydrobiopterin biosynthesis enzymes-like bind purine or pterin in topologically similar sites between subunits ! T-fold beta(2)-alpha(2)-beta(2); 2 layers: alpha/beta; antiparallel sheet 1234 ! tunnel-shaped: its known members form wide oligomeric barrels different sizes 1sql d1sqln_ N:52-68,71-88,90-100 1nbu d1nbuf_ F:53-69,72-88,90-100 1nbu d1nbud_ D:53-69,72-88,90-100 1sql d1sqlb_ B:52-68,71-88,90-100 1nbu d1nbub_ B:53-69,72-88,90-100 1nbu d1nbue_ E:53-69,72-88,90-100 1sql d1sqlp_ P:52-68,71-88,90-100 1nbu d1nbug_ G:53-69,72-88,90-100 1sql d1sqld_ D:52-68,71-88,90-100 1nbu d1nbuc_ C:53-69,72-88,90-100 1nbu d1nbua_ A:53-69,72-88,90-100 1sql d1sqlj_ J:52-68,71-88,90-100 1sql d1sqlh_ H:52-68,71-88,90-100 1sql d1sqlm_ M:52-68,71-88,90-100 1sql d1sqli_ I:52-68,71-88,90-100 1nbu d1nbuh_ H:53-67,72-88,90-100 1wpl d1wplh_ H:155-170,172-189,190-201 1sql d1sqlo_ O:52-68,71-88,90-100 1wpl d1wplg_ G:155-170,172-189,190-201 1wpl d1wpld_ D:155-170,172-189,190-201 1wpl d1wplb_ B:155-170,172-189,190-201 1wpl d1wpli_ I:155-170,172-189,190-201 1sql d1sqlk_ K:52-68,71-88,90-100 1wpl d1wpla_ A:155-170,172-189,190-201 1wpl d1wplf_ F:155-170,172-189,190-201 1sql d1sqll_ L:52-66,71-88,90-100 1wpl d1wplc_ C:155-170,172-189,190-201 1sql d1sqlg_ G:52-66,71-88,90-100 1wpl d1wplj_ J:155-170,172-189,190-201 1wpl d1wple_ E:155-170,172-189,190-201 1fb1 d1fb1e_ E:164-179,181-198,199-209 1wur d1wure1 E:131-146,148-165,166-177 1wuq d1wuqe1 E:131-146,148-165,166-177 1wur d1wurb1 B:131-146,148-165,166-177 1sql d1sqlf_ F:52-66,71-88,90-100 1wuq d1wuqa1 A:131-146,148-165,166-177 1sql d1sqle_ E:52-68,71-88,90-100 1n3s d1n3sh_ H:133-148,150-167,170-179 1n3s d1n3sb_ B:133-148,150-167,170-179 1n3s d1n3sg_ G:133-148,150-167,170-179 1a8r d1a8rc_ C:133-148,150-167,170-179 1a8r d1a8ra_ A:133-148,150-167,170-179 1sql d1sqlc_ C:52-67,71-88,90-100 1n3s d1n3se_ E:133-148,150-167,170-179 1n3s d1n3si_ I:133-148,150-167,170-179 1a8r d1a8rg_ G:133-148,150-167,170-179 1a8r d1a8rk_ K:133-148,150-167,170-179 1a8r d1a8rj_ J:133-148,150-167,170-179 1a8r d1a8rd_ D:133-148,150-167,170-179 1n3s d1n3sa_ A:133-148,150-167,170-179 2nm2 d2nm2a1 A:53-69,72-89,91-101 1n3s d1n3sd_ D:133-148,150-167,170-179 1n3r d1n3rb_ B:133-148,150-167,170-179 1a8r d1a8rb_ B:133-148,150-167,170-179 1a8r d1a8ro_ O:133-148,150-167,170-179 1a8r d1a8rn_ N:133-148,150-167,170-179 1fbx d1fbxn_ N:133-147,150-167,170-178 1wuq d1wuqd1 D:131-146,148-165,165-177 1sql d1sqla_ A:52-66,71-88,90-100 1n3t d1n3tm_ M:133-148,150-167,170-179 1rrw d1rrwa_ A:53-67,72-89,91-101 1wur d1wurd1 D:131-146,148-165,165-177 2dhn d2dhna_ A:53-68,72-89,91-101 1rsi d1rsia_ A:53-67,72-89,91-101 1fbx d1fbxc_ C:133-148,150-167,170-179 1n3r d1n3rh_ H:133-147,150-167,170-180 1rs4 d1rs4a_ A:53-68,72-89,91-101 1is8 d1is8b_ B:155-170,172-189,189-201 1n3r d1n3ra_ A:133-148,150-167,170-180 1n3r d1n3rf_ F:133-148,150-167,170-180 1rsd d1rsda_ A:53-69,72-89,91-101 1rs2 d1rs2a_ A:53-67,72-89,91-101 2nm3 d2nm3a1 A:53-68,72-89,91-101 1is8 d1is8h_ H:155-170,172-189,189-201 1rri d1rria_ A:53-68,72-89,91-101 1dhn d1dhna_ A:53-69,72-89,91-101 1z9w d1z9wa1 A:53-67,72-88,90-101 2nm2 d2nm2b1 B:53-69,72-89,91-101 1is8 d1is8g_ G:155-170,172-189,189-201 1is8 d1is8i_ I:155-170,172-189,189-201 1u68 d1u68a_ A:53-69,72-89,91-101 1n3r d1n3rk_ K:133-148,150-167,170-180 2nm2 d2nm2d1 D:53-68,72-89,91-101 1n3r d1n3rg_ G:133-148,150-167,170-180 1is8 d1is8f_ F:155-170,172-189,189-201 1is8 d1is8d_ D:155-170,172-189,189-201 1is8 d1is8e_ E:155-170,172-189,189-201 1is8 d1is8c_ C:155-170,172-189,189-201 1is8 d1is8j_ J:155-170,172-189,189-201 1n3r d1n3rl_ L:133-148,150-167,170-180 2nm2 d2nm2c1 C:53-68,72-89,91-101 1is8 d1is8a_ A:155-170,172-189,189-201 1rry d1rrya_ A:53-68,72-89,91-101 1n3r d1n3re_ E:133-148,150-167,170-180 1a8r d1a8rh_ H:133-148,150-167,170-180 1a8r d1a8rl_ L:133-148,150-167,170-180 1n3r d1n3rm_ M:133-148,150-167,170-180 1a8r d1a8ri_ I:133-148,150-167,170-180 1a8r d1a8rf_ F:133-148,150-167,170-180 1n3r d1n3rc_ C:133-148,150-167,170-180 1n3r d1n3rj_ J:133-148,150-167,170-180 1n3s d1n3sj_ J:133-148,150-167,170-180 1n3r d1n3rn_ N:133-147,150-167,170-180 1a8r d1a8rm_ M:133-148,150-167,170-180 1n3r d1n3ro_ O:133-147,150-167,170-180 1n3t d1n3ti_ I:133-147,150-167,170-180 1a8r d1a8re_ E:133-148,150-167,170-180 1n3s d1n3sf_ F:133-148,150-167,170-180 1n3r d1n3ri_ I:133-148,150-167,170-180 1n3s d1n3sc_ C:133-148,150-167,170-180 1n3t d1n3th_ H:133-148,150-167,170-180 1n3t d1n3tj_ J:133-148,150-167,170-180 1n3r d1n3rd_ D:133-147,150-167,170-180 1n3t d1n3to_ O:133-147,150-167,170-180 1fbx d1fbxo_ O:133-148,150-167,170-180 1n3t d1n3td_ D:133-148,150-167,170-180 1a9c d1a9ci_ I:133-148,150-167,170-180 1wuq d1wuqb1 B:131-146,148-165,166-178 1j2g d1j2ga1 A:72-87,91-108,111-120 1n3t d1n3tn_ N:133-147,150-167,170-180 1n3t d1n3ta_ A:133-148,150-167,170-180 1j2g d1j2gd1 D:72-87,91-108,111-120 1a9c d1a9cl_ L:133-148,150-167,170-180 1a9c d1a9cj_ J:133-148,150-167,170-180 1n3t d1n3tf_ F:133-148,150-167,170-180 1gtp d1gtpj_ J:133-148,150-167,170-180 1a9c d1a9cn_ N:133-148,150-167,170-180 1gtp d1gtpb_ B:133-148,150-167,170-180 1a9c d1a9ca_ A:133-148,150-167,170-180 1fbx d1fbxh_ H:133-148,150-167,170-180 1a9c d1a9cd_ D:133-148,150-167,170-180 1j2g d1j2gc1 C:72-87,91-108,111-120 1a9c d1a9ce_ E:133-148,150-167,170-180 1a9c d1a9co_ O:133-148,150-167,170-180 1a9c d1a9cc_ C:133-148,150-167,170-180 1a9c d1a9cf_ F:133-148,150-167,170-180 1a9c d1a9cb_ B:133-148,150-167,170-180 1gtp d1gtpk_ K:133-148,150-167,170-180 1a9c d1a9ch_ H:133-148,150-167,170-180 1gtp d1gtpc_ C:133-148,150-167,170-180 1gtp d1gtpp_ P:133-148,150-167,170-180 1gtp d1gtpi_ I:133-148,150-167,170-180 1gtp d1gtps_ S:133-148,150-167,170-180 1wuq d1wuqc1 C:131-146,148-165,166-178 1fbx d1fbxk_ K:133-148,150-167,170-180 1gtp d1gtpn_ N:133-148,150-167,170-180 1a9c d1a9cm_ M:133-148,150-167,170-180 1fbx d1fbxb_ B:133-148,150-167,170-180 1wur d1wurc1 C:131-146,148-165,166-178 1a9c d1a9ck_ K:133-148,150-167,170-180 1n3t d1n3tc_ C:133-147,150-167,170-180 1gtp d1gtpm_ M:133-148,150-167,170-180 1gtp d1gtpd_ D:133-148,150-167,170-180 1gtp d1gtpr_ R:133-148,150-167,170-180 1gtp d1gtpt_ T:133-148,150-167,170-180 1gtp d1gtpo_ O:133-148,150-167,170-180 1n3t d1n3tg_ G:133-147,150-167,170-180 1a9c d1a9cg_ G:133-148,150-167,170-180 1gtp d1gtpf_ F:133-148,150-167,170-180 1gtp d1gtpa_ A:133-148,150-167,170-180 1gtp d1gtpq_ Q:133-148,150-167,170-180 1fbx d1fbxl_ L:133-148,150-167,170-180 1n3t d1n3tl_ L:133-147,150-167,170-180 1gtp d1gtpg_ G:133-148,150-167,170-180 1n3t d1n3te_ E:133-147,150-167,170-180 1gtp d1gtpe_ E:133-148,150-167,170-180 1fbx d1fbxj_ J:133-148,150-167,170-180 1j2g d1j2gb1 B:72-87,91-108,111-120 1wur d1wura1 A:131-146,148-165,166-178 1n3t d1n3tb_ B:133-147,150-167,170-180 1gtp d1gtph_ H:133-148,150-167,170-180 1gtp d1gtpl_ L:133-148,150-167,170-180 1fbx d1fbxi_ I:133-148,150-167,170-180 1wm9 d1wm9b1 B:131-146,148-165,166-178 1wm9 d1wm9c1 C:131-146,148-165,166-178 1fbx d1fbxg_ G:133-148,150-167,170-180 1fbx d1fbxm_ M:133-148,150-167,170-180 1wm9 d1wm9e1 E:131-146,148-165,166-178 1fbx d1fbxa_ A:133-148,150-167,170-180 1wm9 d1wm9a1 A:131-146,148-165,166-178 1fbx d1fbxe_ E:133-148,150-167,170-180 1fbx d1fbxd_ D:133-148,150-167,170-180 1is7 d1is7j_ J:155-170,172-189,190-202 1n3t d1n3tk_ K:133-148,150-167,170-180 1is7 d1is7f_ F:155-170,172-189,190-202 1is7 d1is7d_ D:155-170,172-189,190-202 1fbx d1fbxf_ F:133-148,150-167,170-180 1is7 d1is7i_ I:155-170,172-189,190-202 1is7 d1is7h_ H:155-170,172-189,190-202 1is7 d1is7g_ G:155-170,172-189,190-202 1is7 d1is7b_ B:155-170,172-189,190-202 1is7 d1is7e_ E:155-170,172-189,190-202 1is7 d1is7a_ A:155-170,172-189,190-202 1is7 d1is7c_ C:155-170,172-189,190-202 1wm9 d1wm9d1 D:131-146,148-165,165-178 1fb1 d1fb1c_ C:164-178,181-198,199-211 1fb1 d1fb1a_ A:164-179,181-198,198-211 1fb1 d1fb1b_ B:164-179,181-198,198-211 1fb1 d1fb1d_ D:164-179,181-198,199-211 2yzb d2yzbd1 D:66-81,84-101,102-113 2yzb d2yzbe1 E:66-81,84-101,102-113 1vax d1vaxe2 E:66-81,84-101,102-113 2yzb d2yzbf1 F:66-81,84-101,102-113 2yzb d2yzbg1 G:66-81,84-101,102-113 2yze d2yzee1 E:66-81,84-101,102-113 2yzc d2yzce1 E:66-81,84-101,102-113 2yzb d2yzba1 A:66-81,84-101,102-113 2yzb d2yzbc1 C:66-81,84-101,102-113 2yzc d2yzcd1 D:66-81,84-101,102-113 2yzc d2yzca1 A:66-81,84-101,102-113 1vax d1vaxb2 B:66-81,84-101,102-113 2yzc d2yzcg1 G:66-81,84-101,102-113 1vax d1vaxd2 D:66-81,84-101,102-113 2yzb d2yzbb1 B:66-81,84-101,102-113 2yze d2yzef1 F:66-81,84-101,102-113 1vay d1vayf2 F:66-81,84-101,102-113 1vax d1vaxg2 G:66-81,84-101,102-113 2yze d2yzeb1 B:66-81,84-101,102-113 2yze d2yzed1 D:66-81,84-101,102-113 2yze d2yzea1 A:66-81,84-101,102-113 2yzc d2yzcf1 F:66-81,84-101,102-113 1vax d1vaxf2 F:66-81,84-101,102-113 2yze d2yzec1 C:66-81,84-101,102-113 2yze d2yzeg1 G:66-81,84-101,102-113 1vax d1vaxa2 A:66-81,84-101,102-113 2yzd d2yzdg1 G:66-81,84-101,102-113 2yzc d2yzcb1 B:66-81,84-101,102-113 2yzd d2yzde1 E:66-81,84-101,102-113 1vax d1vaxc2 C:66-81,84-101,102-113 2yzc d2yzcc1 C:66-81,84-101,102-113 2yzd d2yzda1 A:66-81,84-101,102-113 2yzc d2yzch1 H:66-81,84-101,102-113 1vay d1vayc2 C:66-81,84-101,102-113 2yze d2yzeh1 H:66-81,84-101,102-113 1vax d1vaxh2 H:66-81,84-101,102-113 2yzb d2yzbh1 H:66-81,84-101,102-113 1y13 d1y13a_ A:63-79,126-143,152-162 1vay d1vaya2 A:66-81,84-101,102-113 2yzd d2yzdh1 H:66-81,84-101,102-113 1vay d1vayg2 G:66-81,84-101,102-113 1y13 d1y13b_ B:63-79,126-143,152-162 2yzd d2yzdd1 D:66-81,84-101,102-113 1y13 d1y13c_ C:63-79,126-143,152-162 1vay d1vaye2 E:66-81,84-101,102-113 1vay d1vayd2 D:66-81,84-101,102-113 1vay d1vayb2 B:66-81,84-101,102-113 2yzd d2yzdc1 C:66-81,84-101,102-113 1j2g d1j2gc2 C:229-245,248-265,266-278 2yzd d2yzdf1 F:66-81,84-101,102-113 1j2g d1j2gd2 D:229-245,248-265,266-278 1vay d1vayh2 H:66-81,84-101,102-113 1j2g d1j2ga2 A:229-245,248-265,266-278 1ws2 d1ws2b2 B:200-223,226-243,244-255 1xxj d1xxjc1 C:56-72,75-92,93-104 2yzd d2yzdb1 B:66-81,84-101,102-113 2fub d2fuba1 A:56-72,75-92,93-104 3cku d3ckua1 A:56-72,75-92,93-104 1r56 d1r56g1 G:56-72,75-92,93-104 1xy3 d1xy3g1 G:56-72,75-92,93-104 2icq d2icqa1 A:56-72,75-92,93-104 1j2g d1j2gb2 B:229-245,248-265,266-278 2pes d2pesa1 A:56-72,75-92,93-104 1xxj d1xxja1 A:56-72,75-92,93-104 1r4u d1r4ua1 A:56-72,75-92,93-104 1xxj d1xxjb1 B:56-72,75-92,93-104 1ws3 d1ws3a1 A:56-72,75-92,93-104 1xt4 d1xt4a1 A:56-72,75-92,93-104 1xy3 d1xy3b1 B:56-72,75-92,93-104 3bjp d3bjpa1 A:56-72,75-92,93-104 2fxl d2fxla1 A:56-72,75-92,93-104 1xy3 d1xy3h1 H:56-72,75-92,93-104 2yzd d2yzdh2 H:198-218,221-238,239-250 2ic0 d2ic0a1 A:56-72,75-92,93-104 1xy3 d1xy3d1 D:56-72,75-92,93-104 1r56 d1r56h1 H:56-72,75-92,93-104 2iba d2ibaa1 A:56-72,75-92,93-104 1ws2 d1ws2d1 D:56-72,75-92,93-104 1ws3 d1ws3b1 B:56-72,75-92,93-104 2zkb d2zkba1 A:56-72,75-92,93-104 1r51 d1r51a1 A:56-72,75-92,93-104 1wrr d1wrra1 A:56-72,75-92,93-104 1r4s d1r4sa1 A:56-72,75-92,93-104 2zka d2zkaa1 A:56-72,75-92,93-104 1r56 d1r56a1 A:56-72,75-92,93-104 3cks d3cksa1 A:56-72,75-92,93-104 1vay d1vayb1 B:198-218,221-238,239-250 1ws3 d1ws3c1 C:56-72,75-92,93-104 1r56 d1r56f1 F:56-72,75-92,93-104 1xxj d1xxjd1 D:56-72,75-92,93-104 1ws3 d1ws3d1 D:56-71,75-92,93-104 1ws2 d1ws2b1 B:56-72,75-92,93-104 1xy3 d1xy3a1 A:56-72,75-92,93-104 1ws2 d1ws2c1 C:56-72,75-92,93-104 1xy3 d1xy3e1 E:56-72,75-92,93-104 1xy3 d1xy3f1 F:56-72,75-92,93-104 1xy3 d1xy3c1 C:56-72,75-92,93-104 1vay d1vayf1 F:198-218,221-238,239-250 3bk8 d3bk8a1 A:56-72,75-92,93-104 1r56 d1r56e1 E:56-72,75-92,93-104 1r56 d1r56b1 B:56-72,75-92,93-104 1ws2 d1ws2a1 A:56-72,75-92,93-104 2yzd d2yzdd2 D:198-218,221-238,239-250 2yzb d2yzbh2 H:198-218,221-238,239-250 2yzd d2yzdb2 B:198-218,221-238,239-250 1vay d1vayh1 H:198-218,221-238,239-250 1vay d1vaye1 E:198-218,221-238,239-250 2yzd d2yzde2 E:198-218,221-238,239-250 1r56 d1r56c1 C:56-72,75-92,93-104 2yzd d2yzdg2 G:198-218,221-238,239-250 1r56 d1r56d1 D:56-72,75-92,93-104 1vax d1vaxh1 H:198-218,221-238,239-250 1vay d1vayg1 G:198-218,221-238,239-250 2yzd d2yzdc2 C:198-218,221-238,239-250 2yze d2yzec2 C:198-218,221-238,239-250 1vay d1vayc1 C:198-218,221-238,239-250 1vay d1vaya1 A:198-218,221-238,239-250 1vax d1vaxc1 C:198-218,221-238,239-250 1vax d1vaxd1 D:198-218,221-238,239-250 2yzb d2yzbb2 B:198-218,221-238,239-250 2yzd d2yzda2 A:198-218,221-238,239-250 2yze d2yzea2 A:198-218,221-238,239-250 2yze d2yzed2 D:198-218,221-238,239-250 1vax d1vaxa1 A:198-218,221-238,239-250 2yzb d2yzba2 A:198-218,221-238,239-250 2a0s d2a0sa1 A:70-86,133-150,158-168 2a0s d2a0sb1 B:70-86,133-150,158-168 1vay d1vayd1 D:198-218,221-238,239-250 2yzc d2yzcd2 D:198-218,221-238,239-250 2yzc d2yzcb2 B:198-218,221-238,239-250 2yzb d2yzbd2 D:198-218,221-238,239-250 2yzb d2yzbg2 G:198-218,221-238,239-250 2yze d2yzeb2 B:198-218,221-238,239-250 2yzc d2yzcc2 C:198-218,221-238,239-250 1vax d1vaxb1 B:198-218,221-238,239-250 2yzd d2yzdf2 F:198-218,221-238,239-250 2yzc d2yzca2 A:198-218,221-238,239-250 1vax d1vaxe1 E:198-218,221-238,239-250 2yze d2yzee2 E:198-218,221-238,239-250 2yzb d2yzbc2 C:198-218,221-238,239-250 2yzc d2yzcg2 G:198-218,221-238,239-250 2yzb d2yzbe2 E:198-218,221-238,239-250 2yzc d2yzce2 E:198-218,221-238,239-250 2yzb d2yzbf2 F:198-218,221-238,239-250 2yze d2yzef2 F:198-218,221-238,239-250 2yzc d2yzcf2 F:198-218,221-238,239-250 1b66 d1b66b_ B:71-88,105-121,125-133 1b66 d1b66a_ A:71-88,105-121,125-133 2yzc d2yzch2 H:198-217,221-238,239-250 2yze d2yzeh2 H:198-217,221-238,239-250 1b6z d1b6za_ A:71-88,105-121,125-133 1ws3 d1ws3a2 A:200-222,226-243,244-255 1b6z d1b6zb_ B:71-88,105-121,125-133 1gtq d1gtqb_ B:71-88,105-121,125-133 2yze d2yzeg2 G:198-217,221-238,239-250 1vax d1vaxg1 G:198-217,221-238,239-250 1ws3 d1ws3d2 D:200-222,226-243,244-255 2g64 d2g64a1 A:67-83,100-116,121-129 1ws3 d1ws3b2 B:200-222,226-243,244-255 1vax d1vaxf1 F:198-217,221-238,239-250 1gtq d1gtqa_ A:71-88,105-121,125-133 1ws3 d1ws3c2 C:200-222,226-243,244-255 1xy3 d1xy3a2 A:200-222,226-243,244-255 1r56 d1r56a2 A:200-222,226-243,244-255 1r56 d1r56b2 B:200-222,226-243,244-255 1r56 d1r56e2 E:200-222,226-243,244-255 1ws2 d1ws2c2 C:200-222,226-243,244-255 1xy3 d1xy3b2 B:200-222,226-243,244-255 1r56 d1r56d2 D:200-222,226-243,244-255 1xy3 d1xy3d2 D:200-222,226-243,244-255 1xxj d1xxjc2 C:200-222,226-243,244-255 1r56 d1r56c2 C:200-222,226-243,244-255 1ws2 d1ws2a2 A:200-222,226-243,244-255 1xxj d1xxjb2 B:200-222,226-243,244-255 1xy3 d1xy3g2 G:200-222,226-243,244-255 1r56 d1r56f2 F:200-222,226-243,244-255 1r56 d1r56g2 G:200-222,226-243,244-255 1xy3 d1xy3h2 H:200-222,226-243,244-255 1xy3 d1xy3f2 F:200-222,226-243,244-255 1xt4 d1xt4a2 A:200-222,226-243,244-255 1r56 d1r56h2 H:200-222,226-243,244-255 2pes d2pesa2 A:200-222,226-243,244-255 1xy3 d1xy3c2 C:200-222,226-243,244-255 2fub d2fuba2 A:200-222,226-243,244-255 1xy3 d1xy3e2 E:200-222,226-243,244-255 1r4s d1r4sa2 A:200-222,226-243,244-255 1ws2 d1ws2d2 D:200-222,226-243,244-255 1xxj d1xxja2 A:200-222,226-243,244-255 1xxj d1xxjd2 D:200-222,226-243,244-255 1r51 d1r51a2 A:200-222,226-243,244-255 3cku d3ckua2 A:200-222,226-243,244-256 3bk8 d3bk8a2 A:200-222,226-243,244-256 2iba d2ibaa2 A:200-222,226-243,244-256 3cks d3cksa2 A:200-222,226-243,244-256 3bjp d3bjpa2 A:200-222,226-243,244-256 2zka d2zkaa2 A:200-222,226-243,244-256 2fxl d2fxla2 A:200-222,226-243,244-256 2zkb d2zkba2 A:200-222,226-243,244-256 2icq d2icqa2 A:200-222,226-243,244-256 1wrr d1wrra2 A:200-222,226-243,244-256 1r4u d1r4ua2 A:200-222,226-243,244-256 2ic0 d2ic0a2 A:200-222,226-243,244-256 54. d.8.1 Urease, gamma-subunit Urease, gamma-subunit alpha(3)-beta(2); antiparallel hairpin 3ubp d3ubpa_ A:31-50,52-65,78-87 4ubp d4ubpa_ A:31-50,52-65,78-87 2ubp d2ubpa_ A:31-50,52-65,78-87 1a5l d1a5la_ A:31-50,52-65,78-87 1a5o d1a5oa_ A:31-50,52-65,78-87 1ie7 d1ie7a_ A:31-50,52-65,78-87 1ef2 d1ef2c_ C:3031-3050,3052-3065,3078-3087 1ejs d1ejsa_ A:3031-3050,3052-3065,3078-3087 1fwb d1fwba_ A:31-50,52-65,78-87 2kau d2kaua_ A:31-50,52-65,78-87 1fwc d1fwca_ A:31-50,52-65,78-87 1ejt d1ejta_ A:3031-3050,3052-3065,3078-3087 1eju d1ejua_ A:3031-3050,3052-3065,3078-3087 1fwa d1fwaa_ A:31-50,52-65,78-87 1fwj d1fwja_ A:31-50,52-65,78-87 1ejx d1ejxa_ A:3031-3050,3052-3065,3078-3087 1fwd d1fwda_ A:31-50,52-65,78-87 1a5k d1a5ka_ A:31-50,52-65,78-87 1krb d1krba_ A:31-50,52-65,78-87 1ejv d1ejva_ A:3031-3050,3052-3065,3078-3087 1a5m d1a5ma_ A:31-50,52-65,78-87 1fwh d1fwha_ A:31-50,52-65,78-87 1kra d1kraa_ A:31-50,52-65,78-87 1ubp d1ubpa_ A:31-50,52-65,78-87 1ejr d1ejra_ A:3031-3050,3052-3065,3078-3087 1krc d1krca_ A:31-50,52-65,78-87 1fwg d1fwga_ A:31-50,52-65,78-87 1fwe d1fwea_ A:31-50,52-65,78-87 1a5n d1a5na_ A:31-50,52-65,78-87 1fwi d1fwia_ A:31-50,52-65,78-87 1fwf d1fwfa_ A:31-50,52-65,78-87 1s3t d1s3ta_ A:31-50,52-65,78-87 1ejw d1ejwa_ A:3031-3050,3052-3065,3078-3087 1e9z d1e9za2 A:31-50,53-66,79-87 1e9y d1e9ya2 A:31-50,53-66,79-88 55. d.127.1 Creatinase/aminopeptidase Creatinase/aminopeptidase duplication: composed of two very similar alpha+beta folds 1kp0 d1kp0a2 A:270-292,296-312,320-325 1kp0 d1kp0b2 B:270-292,296-312,320-325 1chm d1chma2 A:271-293,297-313,321-326 1chm d1chmb2 B:271-293,297-313,321-326 1xgo d1xgoa2 A:105-123,127-143,274-287 1xgm d1xgmb2 B:105-122,127-143,151-155 1pv9 d1pv9b2 B:244-253,257-273,282-286 1xgm d1xgma2 A:105-122,127-143,151-155 1b6a d1b6aa2 A:162-187,192-209,214-218 1bn5 d1bn5a2 A:162-187,192-209,214-218 1yw8 d1yw8a2 A:162-187,192-209,214-218 1kq9 d1kq9a2 A:162-187,192-209,214-218 1xgm d1xgma2 A:105-122,127-143,274-287 1b59 d1b59a2 A:162-187,192-209,214-218 1boa d1boaa2 A:162-187,192-209,214-218 1qzy d1qzya2 A:162-187,192-209,214-218 1xgm d1xgmb2 B:105-122,127-143,274-287 2ea4 d2ea4a2 A:162-187,192-209,214-218 1kq0 d1kq0a2 A:162-187,192-209,214-218 2oaz d2oaza2 A:162-187,192-209,214-218 1pv9 d1pv9b2 B:126-152,156-172,173-177 2ga2 d2ga2a2 A:162-187,192-209,214-218 2adu d2adua2 A:162-187,192-209,214-218 1yw7 d1yw7a2 A:162-187,192-209,214-218 1pv9 d1pv9a2 A:126-152,156-172,173-177 1xgs d1xgsa2 A:105-122,127-143,151-155 1r58 d1r58a2 A:270-292,296-312,329-333 1xgs d1xgsb2 B:105-122,127-143,151-155 2adu d2adua2 A:270-292,296-312,329-333 1yw7 d1yw7a2 A:270-292,296-312,329-333 1yw9 d1yw9a2 A:270-292,296-312,329-333 1xgm d1xgmb2 B:2-25,29-45,52-57 1xgn d1xgna2 A:2-25,29-45,52-57 1r5h d1r5ha2 A:270-292,296-312,329-333 2ga2 d2ga2a2 A:270-292,296-312,329-333 1xgs d1xgsb2 B:105-122,127-143,274-287 1xgn d1xgna2 A:105-122,127-143,274-287 1pv9 d1pv9a2 A:126-152,156-172,180-185 1xgm d1xgma2 A:2-25,29-45,52-57 1yw8 d1yw8a2 A:270-292,296-312,329-333 2ea2 d2ea2a2 A:270-292,296-312,329-333 1pv9 d1pv9b2 B:126-152,156-172,180-185 1xgs d1xgsa2 A:105-122,127-143,274-287 1qzy d1qzya2 A:270-292,296-312,329-333 1kq9 d1kq9a2 A:270-292,296-312,329-333 1r5g d1r5ga2 A:270-292,296-312,329-333 2oaz d2oaza2 A:270-292,296-312,329-333 2ea4 d2ea4a2 A:270-292,296-312,329-333 1xgn d1xgnb2 B:105-122,127-143,151-155 1b59 d1b59a2 A:270-292,296-312,329-333 1xgs d1xgsb2 B:2-25,29-45,52-57 1xgs d1xgsa2 A:2-25,29-45,52-57 1bn5 d1bn5a2 A:270-292,296-312,329-333 1xgn d1xgnb2 B:2-25,29-45,52-57 1b6a d1b6aa2 A:270-292,296-312,329-333 1xgn d1xgna2 A:105-122,127-143,151-155 2bn7 d2bn7a2 A:177-202,207-223,267-278 1boa d1boaa2 A:270-292,296-312,329-333 2bhb d2bhba2 A:177-202,207-223,267-278 2bhc d2bhca2 A:177-202,207-223,267-278 2bwt d2bwta2 A:177-202,207-223,267-278 2bwy d2bwya2 A:177-202,207-223,267-278 2bh3 d2bh3a2 A:177-202,207-223,267-278 2bww d2bwwa2 A:177-202,207-223,267-278 1m35 d1m35d2 D:177-202,207-223,267-278 2bhd d2bhda2 A:177-202,207-223,267-278 1wl9 d1wl9a2 A:177-202,207-223,267-278 1m35 d1m35b2 B:177-202,207-223,267-278 1wbq d1wbqb2 B:177-202,207-223,267-278 1m35 d1m35f2 F:177-202,207-223,267-278 2bha d2bhaa2 A:177-202,207-223,267-278 1m35 d1m35c2 C:177-202,207-223,267-278 1wbq d1wbqd2 D:177-202,207-223,267-278 1jaw d1jawa2 A:177-202,207-223,267-278 1n51 d1n51a2 A:177-202,207-223,267-278 1m35 d1m35a2 A:177-202,207-223,267-278 1wl6 d1wl6a2 A:177-202,207-223,267-278 1m35 d1m35e2 E:177-202,207-223,267-278 1wlr d1wlra2 A:177-202,207-223,267-278 1a16 d1a16a2 A:177-202,207-223,267-278 2v3y d2v3ya2 A:177-202,207-223,267-278 2bwv d2bwva2 A:177-202,207-223,267-278 1w2m d1w2me2 E:177-202,207-223,267-278 1wbq d1wbqa2 A:177-202,207-223,267-278 2bwu d2bwua2 A:177-202,207-223,267-278 2bws d2bwsa2 A:177-202,207-223,267-278 1w2m d1w2md2 D:177-202,207-223,267-278 2v3z d2v3za2 A:177-202,207-223,267-278 1wbq d1wbqc2 C:177-202,207-223,267-278 1w7v d1w7vb2 B:177-202,207-223,267-278 1w2m d1w2mc2 C:177-202,207-223,267-278 1w7v d1w7vd2 D:177-202,207-223,267-278 1w2m d1w2ma2 A:177-202,207-223,267-278 1w2m d1w2mb2 B:177-202,207-223,267-278 2v3x d2v3xa2 A:177-202,207-223,267-278 1w7v d1w7va2 A:177-202,207-223,267-278 1w2m d1w2mf2 F:177-202,207-223,267-278 2bwx d2bwxa2 A:177-202,207-223,267-278 1w7v d1w7vc2 C:177-202,207-223,267-278 1kq0 d1kq0a2 A:270-291,296-312,329-333 1qxy d1qxya_ A:5-31,35-51,66-71 1qxw d1qxwa_ A:5-31,35-51,66-71 2evo d2evob1 B:119-140,145-161,169-173 2evo d2evoa1 A:119-140,145-161,169-173 2evm d2evma1 A:119-140,145-161,169-173 1qxz d1qxza_ A:7-33,37-54,69-74 2gtx d2gtxb1 B:119-140,145-161,169-173 2gu4 d2gu4b1 B:119-140,145-161,169-173 3d27 d3d27a1 A:119-140,145-161,169-173 2evc d2evca1 A:119-140,145-161,169-173 1xnz d1xnza_ A:119-140,145-161,169-173 2gu6 d2gu6b1 B:119-140,145-161,169-173 2gu7 d2gu7b1 B:119-140,145-161,169-173 1chm d1chmb2 B:160-186,190-211,217-225 1xgo d1xgoa2 A:2-25,29-45,52-57 2p98 d2p98a1 A:119-140,145-161,169-173 2p9a d2p9aa1 A:119-140,145-161,169-173 3mat d3mata_ A:119-140,145-161,169-173 2gu5 d2gu5b1 B:119-140,145-161,169-173 2ggc d2ggca1 A:120-140,145-161,169-173 2gg2 d2gg2a1 A:119-140,145-161,169-173 2gg8 d2gg8a1 A:119-140,145-161,169-173 2gg9 d2gg9a1 A:119-140,145-161,169-173 2p99 d2p99a1 A:119-140,145-161,169-173 2bb7 d2bb7a1 A:119-140,145-161,169-173 2q95 d2q95a1 A:119-140,145-161,169-173 2q93 d2q93a1 A:119-140,145-161,169-173 2q96 d2q96a1 A:119-140,145-161,169-173 2gg7 d2gg7a1 A:119-140,145-161,169-173 1yvm d1yvma1 A:119-140,145-161,169-173 2gg3 d2gg3a1 A:119-140,145-161,169-173 2gu6 d2gu6a1 A:119-140,145-161,169-173 2q94 d2q94a1 A:119-140,145-161,169-173 2gu4 d2gu4a1 A:119-140,145-161,169-173 2q92 d2q92a1 A:119-140,145-161,169-173 2gu5 d2gu5a1 A:119-140,145-161,169-173 2gtx d2gtxa1 A:119-140,145-161,169-173 2bn7 d2bn7a2 A:177-202,207-223,231-236 2bwt d2bwta2 A:177-202,207-223,231-236 2bwy d2bwya2 A:177-202,207-223,231-236 2bhc d2bhca2 A:177-202,207-223,231-236 2bhd d2bhda2 A:177-202,207-223,231-236 2bh3 d2bh3a2 A:177-202,207-223,231-236 2bhb d2bhba2 A:177-202,207-223,231-236 2bwu d2bwua2 A:177-202,207-223,231-236 1jaw d1jawa2 A:177-202,207-223,231-236 1n51 d1n51a2 A:177-202,207-223,231-236 2bha d2bhaa2 A:177-202,207-223,231-236 1w2m d1w2mb2 B:177-202,207-223,231-236 1wl6 d1wl6a2 A:177-202,207-223,231-236 1m35 d1m35b2 B:177-202,207-223,231-236 1w7v d1w7vb2 B:177-202,207-223,231-236 1wbq d1wbqb2 B:177-202,207-223,231-236 1m35 d1m35e2 E:177-202,207-223,231-236 2v3z d2v3za2 A:177-202,207-223,231-236 1w2m d1w2ma2 A:177-202,207-223,231-236 1m35 d1m35d2 D:177-202,207-223,231-236 1m35 d1m35f2 F:177-202,207-223,231-236 2bwx d2bwxa2 A:177-202,207-223,231-236 2v3x d2v3xa2 A:177-202,207-223,231-236 2bww d2bwwa2 A:177-202,207-223,231-236 1wbq d1wbqa2 A:177-202,207-223,231-236 1m35 d1m35a2 A:177-202,207-223,231-236 2bws d2bwsa2 A:177-202,207-223,231-236 1w2m d1w2md2 D:177-202,207-223,231-236 2bwv d2bwva2 A:177-202,207-223,231-236 1w7v d1w7va2 A:177-202,207-223,231-236 1m35 d1m35c2 C:177-202,207-223,231-236 1a16 d1a16a2 A:177-202,207-223,231-236 1w2m d1w2mf2 F:177-202,207-223,231-236 1w2m d1w2mc2 C:177-202,207-223,231-236 1w7v d1w7vc2 C:177-202,207-223,231-236 1wbq d1wbqd2 D:177-202,207-223,231-236 1wbq d1wbqc2 C:177-202,207-223,231-236 1w7v d1w7vd2 D:177-202,207-223,231-236 2ea2 d2ea2a2 A:270-292,296-312,317-322 1wl9 d1wl9a2 A:177-202,207-223,231-236 2v3y d2v3ya2 A:177-202,207-223,231-236 1w2m d1w2me2 E:177-202,207-223,231-236 1wlr d1wlra2 A:177-202,207-223,231-236 1kp0 d1kp0a2 A:159-184,189-210,216-224 1r5h d1r5ha2 A:270-292,296-312,317-322 2adu d2adua2 A:270-292,296-312,317-322 2oaz d2oaza2 A:270-292,296-312,317-322 1yw7 d1yw7a2 A:270-292,296-312,317-322 2ga2 d2ga2a2 A:270-292,296-312,317-322 1r58 d1r58a2 A:270-292,296-312,317-322 1kp0 d1kp0b2 B:159-184,189-210,216-224 2ea4 d2ea4a2 A:270-292,296-312,317-322 1yw9 d1yw9a2 A:270-292,296-312,317-322 1kq0 d1kq0a2 A:270-291,296-312,317-322 1b59 d1b59a2 A:270-292,296-312,317-322 1yw8 d1yw8a2 A:270-292,296-312,317-322 1b6a d1b6aa2 A:270-292,296-312,317-322 1r5g d1r5ga2 A:270-292,296-312,317-322 1o0x d1o0xa_ A:11-37,41-57,72-77 1boa d1boaa2 A:270-292,296-312,317-322 1kq9 d1kq9a2 A:270-292,296-312,317-322 1bn5 d1bn5a2 A:270-292,296-312,317-322 1qzy d1qzya2 A:270-292,296-312,317-322 1xnz d1xnza_ A:7-33,37-54,69-74 4mat d4mata_ A:7-33,37-54,69-74 1chm d1chma2 A:160-185,190-211,217-225 2evc d2evca1 A:7-33,37-54,69-74 2evm d2evma1 A:7-33,37-54,69-74 2gg5 d2gg5a1 A:7-33,37-54,69-74 2p9a d2p9aa1 A:7-33,37-54,69-74 2gtx d2gtxa1 A:7-33,37-54,69-74 2q95 d2q95a1 A:7-33,37-54,69-74 2ggc d2ggca1 A:7-33,37-54,69-74 1mat d1mata_ A:7-33,37-54,69-74 2p98 d2p98a1 A:7-33,37-54,69-74 2gu6 d2gu6a1 A:7-33,37-54,69-74 2evo d2evob1 B:7-33,37-54,69-74 2q96 d2q96a1 A:7-33,37-54,69-74 2q92 d2q92a1 A:7-33,37-54,69-74 2gu4 d2gu4a1 A:7-33,37-54,69-74 2gg9 d2gg9a1 A:7-33,37-54,69-74 2bb7 d2bb7a1 A:7-33,37-54,69-74 2evo d2evoa1 A:7-33,37-54,69-74 2gg0 d2gg0a1 A:7-33,37-54,69-74 2gu5 d2gu5a1 A:7-33,37-54,69-74 2gu5 d2gu5b1 B:7-33,37-54,69-74 1w2m d1w2md2 D:283-305,309-329,352-357 1m35 d1m35e2 E:283-305,309-329,352-357 1w2m d1w2mf2 F:283-305,309-329,352-357 1pv9 d1pv9a2 A:231-252,257-273,281-287 1wbq d1wbqd2 D:283-305,309-329,352-357 1m35 d1m35c2 C:283-305,309-329,352-357 1m35 d1m35d2 D:283-305,309-329,352-357 1m35 d1m35f2 F:283-305,309-329,352-357 1w7v d1w7vd2 D:283-305,309-329,352-357 1jaw d1jawa2 A:283-304,309-329,352-357 2bhb d2bhba2 A:283-304,309-329,352-357 2bha d2bhaa2 A:283-304,309-329,352-357 1w2m d1w2me2 E:283-304,309-329,352-357 2bhd d2bhda2 A:283-304,309-329,352-357 2bh3 d2bh3a2 A:283-304,309-329,352-357 2bwt d2bwta2 A:283-304,309-329,352-357 2bn7 d2bn7a2 A:283-304,309-329,352-357 1w2m d1w2mc2 C:283-304,309-329,352-357 2bhc d2bhca2 A:283-304,309-329,352-357 1wbq d1wbqc2 C:283-304,309-329,352-357 1w2m d1w2ma2 A:283-304,309-329,352-357 2bww d2bwwa2 A:283-304,309-329,352-357 2bwy d2bwya2 A:283-304,309-329,352-357 1wbq d1wbqa2 A:283-304,309-329,352-357 1n51 d1n51a2 A:283-304,309-329,352-357 1wl9 d1wl9a2 A:283-304,309-329,352-357 1wbq d1wbqb2 B:283-304,309-329,352-357 2bws d2bwsa2 A:283-304,309-329,352-357 1wl6 d1wl6a2 A:283-304,309-329,352-357 1m35 d1m35a2 A:283-304,309-329,352-357 2bwx d2bwxa2 A:283-304,309-329,352-357 1wlr d1wlra2 A:283-304,309-329,352-357 2bwv d2bwva2 A:283-304,309-329,352-357 2bwu d2bwua2 A:283-304,309-329,352-357 1m35 d1m35b2 B:283-304,309-329,352-357 1w7v d1w7vc2 C:283-304,309-329,352-357 1w2m d1w2mb2 B:283-304,309-329,352-357 2v3x d2v3xa2 A:283-304,309-329,352-357 2v3z d2v3za2 A:283-304,309-329,352-357 1w7v d1w7vb2 B:283-304,309-329,352-357 2v3y d2v3ya2 A:283-304,309-329,352-357 1w7v d1w7va2 A:283-304,309-329,352-357 1a16 d1a16a2 A:283-304,309-329,352-357 57. d.43.1 Elongation factor Ts (EF-Ts), dimerisation domain comprises two structural repeats of this fold ! EF-Ts domain-like beta(2)-alpha(n)-beta; 2 layers a/b; antiparallel sheet: 123 1efu d1efud4 D:85-103,106-115,128-139 1efu d1efub4 B:85-103,106-115,128-139 1tfe d1tfea_ A:86-104,168-181,183-194 1aip d1aipg2 G:86-104,168-181,183-194 1aip d1aipc2 C:86-104,168-181,183-194 1aip d1aiph2 H:86-104,168-181,183-194 1aip d1aipd2 D:86-104,168-181,183-194 1efu d1efud2 D:161-176,240-249,250-260 1xb2 d1xb2b3 B:262-277,308-317,318-328 1efu d1efub2 B:161-176,240-249,250-260 1efu d1efub4 B:85-103,114-126,128-139 1efu d1efud4 D:85-103,114-126,128-139 1xb2 d1xb2b2 B:144-167,194-207,209-221 61. d.58.14 Ribosomal protein S6 Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2qbd d2qbdf1 F:14-33,67-82,83-92 2qbf d2qbff1 F:14-33,67-82,83-92 2i2u d2i2uf1 F:14-33,67-82,83-92 2ow8 d2ow8g1 G:15-34,71-81,84-92 2j5a d2j5aa1 A:21-40,75-90,91-100 1cqm d1cqmb_ B:15-34,68-83,84-93 3d5c d3d5cf1 F:15-34,68-83,84-93 3d5a d3d5af1 F:15-34,68-83,84-93 1cqm d1cqma_ A:15-34,68-83,84-93 1hr0 d1hr0f_ F:15-34,69-83,84-93 1cqn d1cqna_ A:15-34,68-82,84-93 1xnq d1xnqf_ F:15-34,68-83,84-93 1xmo d1xmof_ F:15-34,68-83,84-93 1xnr d1xnrf_ F:15-34,68-83,84-93 2uuc d2uucf1 F:15-34,69-83,84-93 1i94 d1i94f_ F:15-34,69-83,84-93 1cqn d1cqnb_ B:15-34,68-83,84-93 2j02 d2j02f1 F:15-34,68-83,84-93 1xmq d1xmqf_ F:15-34,68-83,84-93 2bvz d2bvza1 A:15-34,69-83,84-93 2j00 d2j00f1 F:15-34,68-83,84-93 1hnx d1hnxf_ F:15-34,69-83,84-93 1g1x d1g1xa_ A:15-34,68-83,84-93 2uu9 d2uu9f1 F:15-34,69-83,84-93 2uxb d2uxbf1 F:15-34,69-83,84-93 2hgr d2hgri1 I:15-34,69-83,84-93 1ris d1risa_ A:15-34,68-83,84-93 2bxj d2bxjb1 B:15-34,68-83,84-93 2uub d2uubf1 F:15-34,69-83,84-93 2uua d2uuaf1 F:15-34,69-83,84-93 2qnh d2qnhg1 G:15-34,68-83,84-93 2hgp d2hgpi1 I:15-34,69-83,84-93 2vqe d2vqef1 F:15-34,68-83,84-93 2hhh d2hhhf1 F:15-34,69-83,84-93 2bxj d2bxja1 A:15-34,68-82,84-93 1hnz d1hnzf_ F:15-34,68-83,84-93 1n33 d1n33f_ F:15-34,69-83,84-93 1lou d1loua_ A:15-34,68-83,84-93 1i95 d1i95f_ F:15-34,68-83,84-93 1j5e d1j5ef_ F:15-34,68-83,84-93 2uxd d2uxdf1 F:15-34,68-83,84-93 1i96 d1i96f_ F:15-34,68-83,84-93 1fjg d1fjgf_ F:15-34,68-83,84-93 1n36 d1n36f_ F:15-34,69-83,84-93 2vqf d2vqff1 F:15-34,68-83,84-93 2uxc d2uxcf1 F:15-34,69-83,84-93 1hnw d1hnwf_ F:15-34,68-83,84-93 1qjh d1qjha_ A:15-34,68-83,84-93 1g1x d1g1xf_ F:15-34,68-83,84-93 2hgi d2hgii1 I:15-34,68-83,84-93 2e5l d2e5lf1 F:15-34,68-83,84-93 1n32 d1n32f_ F:15-34,69-83,84-93 2v48 d2v48f1 F:15-34,68-83,84-93 2v46 d2v46f1 F:15-34,68-83,84-93 1yl4 d1yl4i1 I:15-34,68-83,84-93 1n34 d1n34f_ F:15-34,69-83,84-93 2b9o d2b9of1 F:15-34,68-83,84-93 2b64 d2b64f1 F:15-34,68-83,84-93 2b9m d2b9mf1 F:15-34,68-83,84-93 62. d.58.56 CcmK-like contains extra C-terminal helix; forms compact hexameric 'tiles' of hexagonal shape ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2g13 d2g13a1 A:16-32,53-72,74-83 2a18 d2a18b1 B:14-30,51-70,73-81 2a18 d2a18a1 A:14-30,51-70,73-81 2a10 d2a10e1 E:14-30,51-70,73-81 2a10 d2a10b1 B:14-30,51-70,73-81 2a10 d2a10d1 D:14-30,51-70,73-81 2a10 d2a10f1 F:14-30,51-70,73-81 2ewh d2ewha1 A:16-32,53-71,74-83 2a1b d2a1bc1 C:12-28,49-68,71-80 2a1b d2a1bk1 K:12-28,49-68,71-80 2a1b d2a1ba1 A:12-28,49-68,71-80 2a1b d2a1bd1 D:12-28,49-68,71-80 2a1b d2a1bb1 B:12-28,49-68,71-80 2a1b d2a1be1 E:12-28,49-68,71-80 2a1b d2a1bg1 G:12-28,49-68,71-80 2a1b d2a1bj1 J:12-28,49-68,71-80 2a1b d2a1bl1 L:12-28,49-68,71-80 2a1b d2a1bh1 H:12-28,49-68,71-80 2a1b d2a1bi1 I:12-28,49-68,71-80 2a1b d2a1bf1 F:12-28,49-68,71-80 2a18 d2a18c1 C:14-30,51-70,73-82 2a10 d2a10c1 C:14-30,51-69,74-82 63. d.58.40 D-ribose-5-phosphate isomerase (RpiA), lid domain Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1o8b d1o8bb2 B:137-151,178-190,191-196 1o8b d1o8ba2 A:137-151,178-190,191-196 1lkz d1lkzb2 B:137-151,178-190,191-196 1lkz d1lkza2 A:137-151,178-190,191-196 1ks2 d1ks2a2 A:137-151,178-190,191-196 1ks2 d1ks2b2 B:137-151,178-190,191-196 1uj5 d1uj5a2 A:144-156,187-199,200-205 1uj4 d1uj4a2 A:144-156,187-199,200-205 1uj6 d1uj6a2 A:144-156,187-199,200-205 1m0s d1m0sb2 B:138-152,179-191,192-197 1lk7 d1lk7b2 B:142-156,189-201,202-207 1lk7 d1lk7a2 A:142-156,189-201,202-207 1lk5 d1lk5a2 A:142-156,189-201,202-207 1lk5 d1lk5b2 B:142-156,189-201,202-207 1lk7 d1lk7d2 D:142-156,189-201,202-207 1lk5 d1lk5d2 D:142-156,189-201,202-207 1m0s d1m0sa2 A:138-152,179-190,192-197 1lk5 d1lk5c2 C:142-156,189-201,202-207 1lk7 d1lk7c2 C:142-156,189-201,202-207 64. a.234.1 Hypothetical protein MPN330 Hypothetical protein MPN330 multihelical; consists of three different 4-helical bundles 1td6 d1td6a_ A:138-151,155-169,173-183 66. d.219.1 PP2C-like contain binuclear metal (Mn) centre ! PP2C-like 4 layers: alpha/beta/beta/alpha; antiparallel beta sheets 1txo d1txoa_ A:198-209,210-226,229-240 1txo d1txob_ B:198-209,210-226,229-240 1a6q d1a6qa2 A:246-262,263-279,281-292 1a6q d1a6qa2 A:64-75,93-120,125-136 1txo d1txob_ B:44-63,68-92,97-108 1txo d1txoa_ A:44-64,68-92,97-108 67. d.122.1 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 8-stranded mixed beta-sheet; 2 layers: alpha/beta 1b62 d1b62a2 A:22-38,95-107,106-113 1nhj d1nhja2 A:22-38,95-107,106-114 1nhh d1nhha2 A:22-38,95-107,106-114 1b63 d1b63a2 A:22-38,95-107,106-114 1til d1tile_ E:33-57,107-118,118-124 1nhi d1nhia2 A:22-38,95-107,106-114 1thn d1thnc_ C:33-57,106-118,118-125 1l0o d1l0ob_ B:33-57,108-118,118-124 1tid d1tida_ A:33-57,107-118,118-125 1tid d1tidc_ C:33-57,107-118,118-125 1gjv d1gjva2 A:235-259,337-351,351-357 1til d1tilc_ C:33-57,106-118,118-125 1l0o d1l0oa_ A:33-57,108-118,118-125 1s16 d1s16b2 B:2031-2050,2112-2123,2123-2133 1gkx d1gkxa2 A:235-259,337-351,351-357 1th8 d1th8a_ A:33-57,106-118,118-125 1thn d1thna_ A:33-57,107-118,118-124 1s16 d1s16a2 A:1031-1050,1112-1123,1123-1133 1til d1tila_ A:33-57,106-118,118-125 1gkz d1gkza2 A:235-259,336-351,351-357 2c2a d2c2aa2 A:366-385,444-457,457-465 1b62 d1b62a2 A:22-38,64-74,106-113 1ysr d1ysrb1 B:339-359,389-397,424-431 1id0 d1id0a_ A:375-394,445-457,457-466 1ysr d1ysra1 A:339-359,389-397,424-431 1ys3 d1ys3b1 B:339-359,389-397,424-431 1ea6 d1ea6b2 B:34-50,109-119,118-125 1ys3 d1ys3a1 A:339-359,389-397,424-431 1jm6 d1jm6b2 B:1233-1257,1288-1297,1334-1341 1ysr d1ysrc1 C:339-359,389-397,424-431 1ys3 d1ys3c1 C:339-359,389-397,424-431 1jm6 d1jm6a2 A:1233-1257,1288-1297,1334-1341 1i58 d1i58b_ B:395-416,506-518,519-526 1kij d1kija2 A:31-53,117-127,126-136 1nhh d1nhha2 A:22-38,64-73,106-114 1kij d1kijb2 B:31-53,117-127,126-136 1ys3 d1ys3c1 C:339-359,412-423,424-431 1ea6 d1ea6a2 A:176-196,222-232,287-293 1nhi d1nhia2 A:22-38,64-73,106-114 1ys3 d1ys3a1 A:339-359,412-423,424-431 1ys3 d1ys3b1 B:339-359,412-423,424-431 1ysr d1ysrb1 B:339-359,412-423,424-431 1ysr d1ysrc1 C:339-359,412-423,424-431 1ea6 d1ea6b2 B:176-196,222-232,287-293 1h7u d1h7ub2 B:176-196,222-232,287-293 1h7s d1h7sb2 B:176-196,222-232,287-293 1h7s d1h7sa2 A:176-196,222-232,287-293 1ysr d1ysra1 A:339-359,412-423,424-431 1ei1 d1ei1b2 B:432-454,516-528,527-537 2pnr d2pnrb2 B:237-261,327-338,340-347 1h7u d1h7ua2 A:176-196,222-232,287-293 2pnr d2pnra2 A:237-261,327-338,340-347 2pnr d2pnrf2 F:237-261,327-338,340-347 2bsm d2bsma1 A:40-67,136-145,144-154 2uwd d2uwda1 A:40-67,136-145,144-154 2vci d2vcia1 A:40-67,136-145,144-154 1jm6 d1jm6a2 A:1233-1257,1318-1332,1334-1341 1kij d1kijb2 B:31-53,88-97,126-136 2ccu d2ccua1 A:40-67,136-145,144-154 2pnr d2pnre2 E:237-261,327-338,340-347 1b3q d1b3qa3 A:399-416,506-518,519-526 2cct d2ccta1 A:40-67,136-145,144-154 1b3q d1b3qb3 B:399-416,506-518,519-526 1i59 d1i59a_ A:399-416,505-518,519-526 1ei1 d1ei1a2 A:32-54,116-128,127-137 1i5d d1i5da_ A:399-416,506-518,519-526 2qf6 d2qf6d1 D:40-67,136-145,144-155 2qf6 d2qf6b1 B:40-67,136-145,144-155 2qf6 d2qf6c1 C:40-67,136-145,144-155 2qf6 d2qf6a1 A:40-67,136-145,144-155 2qfo d2qfoa1 A:40-67,136-145,144-154 2ccs d2ccsa1 A:40-67,136-145,144-155 1jm6 d1jm6b2 B:1233-1257,1318-1332,1334-1341 1i5a d1i5aa_ A:399-416,506-518,519-526 2ch4 d2ch4a2 A:399-416,506-518,519-526 1yet d1yeta_ A:40-67,136-145,144-154 1i5b d1i5ba_ A:399-416,506-518,519-526 1yt2 d1yt2a1 A:96-123,197-206,205-215 2hch d2hcha1 A:96-123,197-206,205-215 1uyc d1uyca_ A:40-67,136-145,144-154 1i58 d1i58a_ A:399-416,505-518,519-526 1aj6 d1aj6a_ A:32-54,119-128,127-136 2iwx d2iwxa1 A:26-53,122-131,130-140 1yc1 d1yc1a1 A:40-67,136-145,144-155 1yes d1yesa_ A:40-67,136-145,144-154 2qfo d2qfob1 B:40-67,136-145,144-155 1y8o d1y8oa2 A:237-263,324-338,340-347 2cdd d2cdda1 A:40-67,136-145,144-155 2bt0 d2bt0a1 A:40-67,136-145,144-155 1yc4 d1yc4a1 A:40-67,136-145,144-155 1y8p d1y8pa2 A:237-263,324-338,340-347 1uyk d1uyka_ A:40-67,136-145,144-154 2cdd d2cddb1 B:40-67,136-145,144-155 2bt0 d2bt0b1 B:40-67,136-145,144-155 2jjc d2jjca1 A:40-67,136-145,144-155 3bm9 d3bm9a1 A:40-67,136-145,144-155 1yer d1yera_ A:40-67,136-145,144-155 1uyl d1uyla_ A:40-67,136-145,144-155 1kzn d1kzna_ A:32-54,119-128,127-137 3d0b d3d0ba1 A:40-67,136-145,144-155 1uyh d1uyha_ A:40-67,136-145,144-155 2fwy d2fwya1 A:40-67,136-145,144-155 1uyi d1uyia_ A:40-67,136-145,144-155 1uyg d1uyga_ A:40-67,136-145,144-155 2bz5 d2bz5a1 A:40-67,136-145,144-155 1uy8 d1uy8a_ A:40-67,136-145,144-155 1yc3 d1yc3a1 A:40-67,136-145,144-155 1uy9 d1uy9a_ A:40-67,136-145,144-155 2bz5 d2bz5b1 B:40-67,136-145,144-155 1uym d1uyma_ A:40-67,136-145,144-155 1byq d1byqa_ A:40-67,136-145,144-154 1yt0 d1yt0a1 A:96-123,197-206,205-215 2qg2 d2qg2a1 A:40-67,136-145,144-155 1uy7 d1uy7a_ A:40-67,136-145,144-155 1uy6 d1uy6a_ A:40-67,136-145,144-155 1r62 d1r62a_ A:234-254,313-327,328-336 1uye d1uyea_ A:40-67,136-145,144-155 1i5c d1i5cb_ B:399-416,506-518,519-526 1uyd d1uyda_ A:40-67,136-145,144-155 2qg0 d2qg0b1 B:40-67,136-145,144-155 1y8n d1y8na2 A:237-263,325-338,340-347 2q8i d2q8ia2 A:237-263,325-338,340-347 1ysz d1ysza1 A:96-123,195-206,205-216 1h7s d1h7sa2 A:176-196,222-232,320-327 1ea6 d1ea6a2 A:176-196,222-232,320-327 1h7s d1h7sb2 B:176-196,222-232,320-327 1h7u d1h7ub2 B:176-196,222-232,320-327 1h7u d1h7ua2 A:176-196,222-232,320-327 1ea6 d1ea6b2 B:176-196,222-232,320-327 1b63 d1b63a2 A:163-183,207-217,253-259 1nhj d1nhja2 A:163-183,207-217,253-259 1nhi d1nhia2 A:163-183,207-217,253-259 1bkn d1bkna2 A:163-183,207-217,253-259 1bkn d1bknb2 B:563-583,607-617,653-659 1nhh d1nhha2 A:163-183,207-217,253-259 1b62 d1b62a2 A:163-183,207-217,253-259 1gjv d1gjva2 A:235-259,291-301,351-357 1nhh d1nhha2 A:163-183,207-217,287-294 1b63 d1b63a2 A:163-183,207-217,287-295 1nhi d1nhia2 A:163-183,207-217,287-295 1nhj d1nhja2 A:163-183,207-217,287-295 1b62 d1b62a2 A:163-183,207-217,287-295 1bkn d1bknb2 B:563-583,607-617,687-695 1bkn d1bkna2 A:163-183,207-217,287-295 68. d.58.11 EF-G C-terminal domain-like Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1n0u d1n0ua4 A:500-516,534-551,553-558 2e1r d2e1ra4 A:497-516,534-551,553-558 2npf d2npfa4 A:500-516,534-551,553-558 2npf d2npfb4 B:497-516,534-551,553-558 2p8z d2p8zt4 T:497-516,534-551,553-558 2p8w d2p8wt4 T:497-516,534-551,553-558 2p8x d2p8xt4 T:497-516,534-551,553-558 1u2r d1u2ra4 A:497-516,534-551,553-558 2p8y d2p8yt4 T:497-516,534-551,553-558 2npf d2npfb5 B:737-751,779-789,791-804 2npf d2npfa5 A:737-751,779-789,791-804 1zm4 d1zm4a4 A:500-516,534-551,553-562 1zm2 d1zm2a4 A:500-516,534-551,553-562 2dy1 d2dy1a4 A:397-410,429-444,446-451 1zm3 d1zm3a4 A:500-516,534-551,553-562 1zm9 d1zm9a4 A:500-516,534-551,553-562 1zm2 d1zm2e4 E:500-516,534-551,553-557 1wdt d1wdta5 A:397-410,429-444,446-451 2p8z d2p8zt5 T:736-751,779-789,792-797 2p8w d2p8wt5 T:736-751,779-789,792-797 2p8y d2p8yt5 T:736-751,779-789,792-797 2p8x d2p8xt5 T:736-751,779-789,792-797 1wdt d1wdta4 A:583-598,624-634,637-649 1zm4 d1zm4e4 E:500-516,534-551,553-562 1n0v d1n0vd4 D:500-516,534-551,553-562 1n0v d1n0vc4 C:500-516,534-551,553-562 1fnm d1fnma4 A:417-436,455-471,473-482 1elo d1eloa4 A:616-628,654-664,667-675 1fnm d1fnma5 A:616-628,654-664,667-675 2bm1 d2bm1a5 A:616-628,654-664,667-675 1dar d1dara4 A:613-628,654-664,667-675 2efg d2efga4 A:616-628,654-664,667-675 2dy1 d2dy1a5 A:583-598,624-634,637-645 1ktv d1ktvb4 B:616-628,654-664,667-675 1u2r d1u2ra5 A:736-751,779-789,792-800 1ktv d1ktva4 A:616-628,654-664,667-675 1efg d1efga4 A:616-624,654-664,667-675 1zm4 d1zm4a5 A:736-751,779-789,792-804 1zm4 d1zm4c5 C:736-751,779-789,792-804 1zm3 d1zm3e5 E:736-751,779-789,792-804 1zm9 d1zm9e5 E:736-751,779-789,792-804 1zm4 d1zm4e5 E:736-751,779-789,792-804 1zm2 d1zm2e5 E:736-751,779-789,792-804 1zm3 d1zm3c5 C:736-751,779-789,792-804 1zm2 d1zm2c5 C:736-751,779-789,792-804 1zm9 d1zm9c5 C:736-751,779-789,792-804 1n0u d1n0ua5 A:736-751,779-789,792-804 1n0v d1n0vd5 D:736-751,779-789,792-804 2bm0 d2bm0a5 A:613-628,654-664,667-675 1zm2 d1zm2a5 A:736-751,779-789,792-804 1zm9 d1zm9a5 A:736-751,779-789,792-804 1zm3 d1zm3a5 A:736-751,779-789,792-804 1n0v d1n0vc5 C:736-751,779-789,792-804 2bv3 d2bv3a5 A:613-628,654-664,667-675 2e1r d2e1ra5 A:736-751,779-789,792-804 69. d.276.1 Hypothetical protein yfbM Hypothetical protein yfbM beta-alpha(2)-beta-alpha(2)-beta(2)-alpha(n)-beta; 3 layers: a/b/a; antiparallel beta-sheet, order: 21543 1ryl d1ryla_ A:11-21,29-37,159-166 1ryl d1rylb_ B:11-20,30-37,159-166 71. d.58.15 Ribosomal protein S10 Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2v48 d2v48j1 J:12-32,78-89,94-100 2v46 d2v46j1 J:12-32,78-89,94-100 3df1 d3df1j1 J:14-33,80-91,96-102 3df3 d3df3j1 J:14-33,80-91,96-102 2j00 d2j00j1 J:12-31,78-89,94-100 2j02 d2j02j1 J:12-31,78-89,94-100 2qbd d2qbdj1 J:14-33,80-91,96-102 2qbf d2qbfj1 J:14-33,80-91,96-102 2qal d2qalj1 J:14-33,80-91,96-102 2qan d2qanj1 J:14-33,80-91,96-102 2qbj d2qbjj1 J:14-33,80-91,96-102 2qbh d2qbhj1 J:14-33,80-91,96-102 2hgi d2hgim1 M:12-31,78-89,93-100 2z4m d2z4mj1 J:14-33,80-91,96-102 2z4k d2z4kj1 J:14-33,80-91,96-102 2hgr d2hgrm1 M:12-31,78-89,93-100 2hgp d2hgpm1 M:12-31,78-89,93-100 2qbb d2qbbj1 J:14-33,80-91,96-102 2qb9 d2qb9j1 J:14-33,80-91,96-102 2i2u d2i2uj1 J:14-34,80-91,96-102 2qow d2qowj1 J:14-33,80-91,96-102 2vhp d2vhpj1 J:14-34,80-91,96-102 1vs7 d1vs7j1 J:14-34,80-91,96-102 1fjg d1fjgj_ J:12-32,78-89,94-100 1hr0 d1hr0j_ J:12-32,78-89,94-100 1vs5 d1vs5j1 J:14-31,80-91,96-102 2b9m d2b9mj1 J:12-32,78-89,94-100 2b64 d2b64j1 J:12-32,78-89,94-100 2b9o d2b9oj1 J:12-32,78-89,94-100 2avy d2avyj1 J:14-31,80-91,96-102 1yl4 d1yl4m1 M:12-31,78-89,94-100 1hnx d1hnxj_ J:12-31,78-89,94-100 1hnz d1hnzj_ J:12-31,78-89,94-100 2uua d2uuaj1 J:12-31,78-89,94-99 2i2p d2i2pj1 J:14-31,80-91,96-101 2uuc d2uucj1 J:12-31,78-89,94-99 2uub d2uubj1 J:12-31,78-89,94-99 2uu9 d2uu9j1 J:12-31,78-89,94-99 1hnw d1hnwj_ J:12-32,78-89,94-99 2uxc d2uxcj1 J:12-31,78-89,94-99 2vho d2vhoj1 J:14-31,80-91,96-100 72. c.109.1 PEP carboxykinase N-terminal domain PEP carboxykinase N-terminal domain contains mixed beta-sheets; topology is partly similar to that of the catalytic C-terminal domain 1khb d1khba2 A:49-64,163-175,353-359 1m51 d1m51a2 A:49-64,163-175,353-359 1khe d1khea2 A:49-64,163-175,353-359 1nhx d1nhxa2 A:49-64,163-175,353-359 2gmv d2gmva2 A:49-64,163-175,353-359 1khg d1khga2 A:49-64,163-175,353-359 1khf d1khfa2 A:49-64,163-175,353-359 2gmv d2gmvb2 B:49-64,163-175,353-359 1ii2 d1ii2b2 B:10-23,114-126,281-285 1ii2 d1ii2a2 A:10-23,114-126,281-285 1k3c d1k3ca2 A:28-38,141-153,308-312 2olr d2olra2 A:28-38,141-153,308-312 1oen d1oena2 A:28-38,141-153,308-312 2pxz d2pxzx2 X:28-38,141-153,308-312 2py7 d2py7x2 X:28-38,141-153,308-312 1k3d d1k3da2 A:28-38,141-153,308-312 2olq d2olqa2 A:28-38,141-153,308-312 1os1 d1os1a2 A:28-38,141-153,308-312 1aq2 d1aq2a2 A:28-38,141-153,308-312 2pc9 d2pc9a2 A:20-32,122-134,293-297 1ayl d1ayla2 A:28-38,141-153,308-312 1j3b d1j3ba2 A:20-32,122-134,293-297 1xkv d1xkva2 A:20-32,122-134,293-297 2pc9 d2pc9c2 C:20-32,122-134,293-297 1xkv d1xkvb2 B:20-32,122-134,293-297 1j3b d1j3bb2 B:20-32,122-134,293-297 2pc9 d2pc9d2 D:20-32,122-134,293-297 2pc9 d2pc9b2 B:20-32,122-134,293-297 73. a.98.1 R1 subunit of ribonucleotide reductase, N-terminal domain R1 subunit of ribonucleotide reductase, N-terminal domain multihelical consists of two all-alpha subdomains ! subdomain 1 (residues 10-100) is a 4-helical bundle 1pem d1pema1 A:15-25,33-53,618-624 1peu d1peua1 A:15-25,33-53,618-624 2bq1 d2bq1e1 E:15-26,33-53,618-624 2bq1 d2bq1f1 F:15-26,33-53,618-624 1peq d1peqa1 A:15-26,33-53,618-624 1peo d1peoa1 A:15-26,33-53,618-624 4r1r d4r1rc1 C:54-70,74-95,649-656 4r1r d4r1rb1 B:54-70,74-95,649-656 4r1r d4r1ra1 A:54-70,74-95,649-656 7r1r d7r1ra1 A:54-70,74-95,649-656 7r1r d7r1rc1 C:54-70,74-95,649-656 7r1r d7r1rb1 B:54-70,74-95,649-656 5r1r d5r1rc1 C:54-70,74-95,649-656 1r1r d1r1rb1 B:54-70,74-95,649-656 1r1r d1r1ra1 A:54-70,74-95,649-656 1r1r d1r1rc1 C:54-70,74-95,649-656 5r1r d5r1rb1 B:54-70,74-95,649-656 5r1r d5r1ra1 A:54-70,74-95,649-656 3r1r d3r1rc1 C:54-70,74-95,649-656 3r1r d3r1ra1 A:54-70,74-95,649-656 3r1r d3r1rb1 B:54-70,74-95,649-656 6r1r d6r1rc1 C:54-70,74-95,649-656 6r1r d6r1rb1 B:54-70,74-95,649-656 6r1r d6r1ra1 A:54-70,74-95,649-656 1rlr d1rlra1 A:54-70,74-95,649-656 2r1r d2r1ra1 A:54-70,74-95,649-656 2r1r d2r1rb1 B:54-70,74-95,649-656 2r1r d2r1rc1 C:54-70,74-95,649-656 2bq1 d2bq1f1 F:15-26,101-113,618-624 4r1r d4r1rc1 C:54-70,144-156,649-656 4r1r d4r1rb1 B:54-70,144-156,649-656 4r1r d4r1ra1 A:54-70,144-156,649-656 1peo d1peoa1 A:15-26,101-113,618-624 2bq1 d2bq1e1 E:15-26,101-113,618-624 1rlr d1rlra1 A:54-70,144-156,649-656 7r1r d7r1rc1 C:54-70,144-156,649-656 7r1r d7r1ra1 A:54-70,144-156,649-656 7r1r d7r1rb1 B:54-70,144-156,649-656 1peq d1peqa1 A:15-26,101-113,618-624 5r1r d5r1rc1 C:54-70,144-156,649-656 1peu d1peua1 A:15-25,101-113,618-624 5r1r d5r1rb1 B:54-70,144-156,649-656 5r1r d5r1ra1 A:54-70,144-156,649-656 6r1r d6r1rc1 C:54-70,144-156,649-656 6r1r d6r1rb1 B:54-70,144-156,649-656 6r1r d6r1ra1 A:54-70,144-156,649-656 3r1r d3r1rc1 C:54-70,144-156,649-656 3r1r d3r1ra1 A:54-70,144-156,649-656 3r1r d3r1rb1 B:54-70,144-156,649-656 1pem d1pema1 A:15-25,101-113,618-624 1r1r d1r1rb1 B:54-70,144-156,649-656 1r1r d1r1ra1 A:54-70,144-156,649-656 1r1r d1r1rc1 C:54-70,144-156,649-656 2r1r d2r1ra1 A:54-70,144-156,649-656 2r1r d2r1rb1 B:54-70,144-156,649-656 2r1r d2r1rc1 C:54-70,144-156,649-656 75. d.58.28 Peptide methionine sulfoxide reductase common fold is elaborated with additional secondary structures ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1ff3 d1ff3b_ B:51-63,106-119,135-141 1ff3 d1ff3a_ A:51-63,106-119,135-141 1ff3 d1ff3c_ C:51-63,106-119,135-141 1fva d1fvab_ B:72-83,127-140,156-161 1fvg d1fvga_ A:72-83,127-140,156-161 1fva d1fvaa_ A:72-83,127-140,156-161 77. d.58.6 Nucleoside diphosphate kinase, NDK Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1b4s d1b4sc_ C:23-36,86-96,120-124 1b4s d1b4sb_ B:23-36,86-96,120-124 1mn7 d1mn7a_ A:23-36,86-96,120-124 2az1 d2az1d1 D:20-33,83-93,117-121 1mn7 d1mn7b_ B:23-36,86-96,120-124 2az3 d2az3h1 H:20-33,83-93,117-121 1b4s d1b4sa_ A:23-36,86-96,120-124 1f3f d1f3fc_ C:23-36,86-96,120-124 1nb2 d1nb2a_ A:17-30,80-90,114-118 2bef d2befa_ A:23-36,86-96,120-124 1f3f d1f3fb_ B:23-36,86-96,120-124 1ehw d1ehwa_ A:19-32,82-92,116-120 1k44 d1k44c_ C:17-30,80-90,115-119 1f3f d1f3fa_ A:23-36,86-96,120-124 1k44 d1k44f_ F:17-30,80-90,115-119 1k44 d1k44a_ A:17-30,80-90,115-119 1k44 d1k44b_ B:17-30,80-90,115-119 2az3 d2az3i1 I:20-33,83-93,117-121 1mn9 d1mn9a_ A:23-36,86-96,120-124 1k44 d1k44e_ E:17-30,80-90,115-119 1k44 d1k44d_ D:17-30,80-90,115-119 2bef d2befb_ B:23-36,86-96,120-124 1mn9 d1mn9b_ B:23-36,86-96,120-124 1mn9 d1mn9c_ C:23-36,86-96,120-124 2az3 d2az3e1 E:20-33,83-93,117-121 1w7w d1w7we_ E:18-31,81-91,115-119 1w7w d1w7wa_ A:18-31,81-91,115-119 1hiy d1hiya_ A:23-36,86-96,120-124 1w7w d1w7wc_ C:18-31,81-91,115-119 1hiy d1hiyc_ C:423-436,486-496,520-524 1u8w d1u8wf_ F:16-29,79-89,113-117 1b99 d1b99c_ C:23-36,86-96,120-124 1kdn d1kdnc_ C:23-36,86-96,120-124 1lwx d1lwxb_ B:23-36,86-96,120-124 1npk d1npka_ A:23-36,86-96,120-124 1ncl d1ncla_ A:23-36,86-96,120-124 2az1 d2az1c1 C:20-33,83-93,117-121 1hlw d1hlwa_ A:23-36,86-96,120-124 1ndp d1ndpb_ B:23-36,86-96,120-124 1ndk d1ndka_ A:23-36,86-96,120-124 2az1 d2az1e1 E:20-33,83-93,117-121 2bef d2befc_ C:23-36,86-96,120-124 1lwx d1lwxc_ C:23-36,86-96,120-124 1bux d1buxb_ B:23-36,86-96,120-124 2az3 d2az3d1 D:20-33,83-93,117-121 1leo d1leoa_ A:23-36,86-96,120-124 1b99 d1b99f_ F:23-36,86-96,120-124 1ehw d1ehwb_ B:19-32,82-92,116-120 1ndp d1ndpa_ A:23-36,86-96,120-124 1hiy d1hiyb_ B:223-236,286-296,320-324 1hhq d1hhqa_ A:23-36,86-96,120-124 1b99 d1b99d_ D:23-36,86-96,120-124 1s5z d1s5zd1 D:23-36,86-96,120-124 1kdn d1kdnb_ B:23-36,86-96,120-124 1bux d1buxc_ C:23-36,86-96,120-124 1kdn d1kdna_ A:23-36,86-96,120-124 1s59 d1s59f_ F:98-111,161-171,195-199 1f6t d1f6tb_ B:23-36,86-96,120-124 1lwx d1lwxa_ A:23-36,86-96,120-124 1f6t d1f6tc_ C:23-36,86-96,120-124 1u8w d1u8wc_ C:16-29,79-89,113-117 1w7w d1w7wb_ B:18-31,81-91,115-119 1w7w d1w7wf_ F:18-31,81-91,115-119 1w7w d1w7wd_ D:18-31,81-91,115-119 1s5z d1s5zc1 C:23-36,86-96,120-124 1u8w d1u8wd_ D:16-29,79-89,113-117 1zs6 d1zs6b1 B:36-49,99-109,133-137 1f6t d1f6ta_ A:23-36,86-96,120-124 2az3 d2az3a1 A:20-33,83-93,117-121 1zs6 d1zs6d1 D:36-49,99-109,133-137 1b99 d1b99e_ E:23-36,86-96,120-124 1s59 d1s59c_ C:98-111,161-171,195-199 1b99 d1b99a_ A:23-36,86-96,120-124 1b99 d1b99b_ B:23-36,86-96,120-124 1u8w d1u8wa_ A:16-29,79-89,113-117 1s5z d1s5zf1 F:23-36,86-96,120-124 1nsp d1nspa_ A:23-36,86-96,120-124 2b8q d2b8qc1 C:16-29,80-90,110-114 1ndc d1ndca_ A:23-36,86-96,120-124 2dy9 d2dy9a1 A:22-35,85-95,122-126 1u8w d1u8we_ E:16-29,79-89,113-117 1s59 d1s59a_ A:98-111,161-171,195-199 1s59 d1s59e_ E:98-111,161-171,195-199 1s57 d1s57a_ A:98-111,161-171,195-199 1bux d1buxa_ A:23-36,86-96,120-124 1s57 d1s57e_ E:98-111,161-171,195-199 1s5z d1s5ze1 E:23-36,86-96,120-124 1bhn d1bhnc_ C:19-32,82-92,116-120 2hvd d2hvda1 A:19-32,82-92,116-120 1bhn d1bhnf_ F:19-32,82-92,116-120 1s57 d1s57f_ F:98-111,161-171,195-199 1s57 d1s57c_ C:98-111,161-171,195-199 1pku d1pkuf1 F:19-32,82-92,116-120 1s57 d1s57d_ D:98-111,161-171,195-199 1s5z d1s5za1 A:23-36,86-96,120-124 2dya d2dyaa1 A:22-35,85-95,122-126 2b8q d2b8qd1 D:16-29,80-90,110-114 1s59 d1s59d_ D:98-111,161-171,195-199 1s5z d1s5zb1 B:23-36,86-96,120-124 3bbf d3bbfa1 A:19-32,82-92,116-120 2hvd d2hvdb1 B:19-32,82-92,116-120 2b8q d2b8qb1 B:16-29,80-90,110-114 1u8w d1u8wb_ B:16-29,79-89,113-117 2dxf d2dxfa1 A:22-35,85-95,122-126 1pku d1pkul1 L:19-32,82-92,116-120 1s59 d1s59b_ B:98-111,161-171,195-199 1s57 d1s57b_ B:98-111,161-171,195-199 3bbf d3bbfb1 B:19-32,82-92,116-120 2dy9 d2dy9b1 B:22-35,85-95,122-126 2dxe d2dxea1 A:22-35,85-95,122-126 1be4 d1be4c_ C:19-32,82-92,116-120 3bbf d3bbfe1 E:19-32,82-92,116-120 2hvd d2hvdc1 C:19-32,82-92,116-120 2dya d2dyab1 B:22-35,85-95,122-126 2dxd d2dxda1 A:22-35,85-95,122-126 1pku d1pkui1 I:19-32,82-92,116-120 1ndl d1ndla_ A:20-33,83-93,117-121 2b8p d2b8pa1 A:16-29,80-90,110-114 1nue d1nuec_ C:19-32,82-92,116-120 1pku d1pkug1 G:19-32,82-92,116-120 1be4 d1be4b_ B:19-32,82-92,116-120 2b8q d2b8qa1 A:16-29,80-90,110-114 1nsk d1nskr_ R:19-32,82-92,116-120 1nue d1nueb_ B:19-32,82-92,116-120 1bhn d1bhnd_ D:19-32,82-92,116-120 1nue d1nuea_ A:19-32,82-92,116-120 1nue d1nuee_ E:19-32,82-92,116-120 2b8q d2b8qf1 F:16-29,80-90,110-114 1nsk d1nskl_ L:19-32,82-92,116-120 2b8q d2b8qe1 E:16-29,80-90,110-114 1nue d1nuef_ F:19-32,82-92,116-120 1pku d1pkue1 E:19-32,82-92,116-120 3bbb d3bbbd1 D:19-32,82-92,116-120 2cwk d2cwka1 A:22-35,85-95,122-126 2dxf d2dxfb1 B:22-35,85-95,122-126 1nue d1nued_ D:19-32,82-92,116-120 1ndl d1ndlc_ C:20-33,83-93,117-121 2dxd d2dxdb1 B:22-35,85-95,122-126 2cwk d2cwkb1 B:22-35,85-95,122-126 1pku d1pkuj1 J:19-32,82-92,116-120 1jxv d1jxvf_ F:19-32,82-92,116-120 1jxv d1jxvc_ C:19-32,82-92,116-120 1nsq d1nsqc_ C:20-33,83-93,117-121 1jxv d1jxva_ A:19-32,82-92,116-120 1ndl d1ndlb_ B:20-33,83-93,117-121 1nsk d1nsko_ O:19-32,82-92,116-120 1nsk d1nskt_ T:19-32,82-92,116-120 2dxe d2dxeb1 B:22-35,85-95,122-126 1jxv d1jxvb_ B:19-32,82-92,116-120 1jxv d1jxve_ E:19-32,82-92,116-120 1jxv d1jxvd_ D:19-32,82-92,116-120 1nsk d1nskn_ N:19-32,82-92,116-120 1nsk d1nsku_ U:19-32,82-92,116-120 1pku d1pkub1 B:19-32,82-92,116-120 1nsq d1nsqb_ B:20-33,83-93,117-121 2b8p d2b8pb1 B:16-29,80-90,110-114 1nsq d1nsqa_ A:20-33,83-93,117-121 2nck d2nckl_ L:19-31,81-91,115-119 1bhn d1bhne_ E:19-32,82-92,116-120 2nck d2nckr_ R:19-31,81-91,115-119 1nlk d1nlkr_ R:19-31,81-91,115-119 1wkk d1wkka1 A:16-29,79-89,113-117 1wkl d1wkla1 A:16-29,79-89,113-117 1wkj d1wkjb1 B:16-29,79-89,113-117 1wkj d1wkja1 A:16-29,79-89,113-117 1nhk d1nhkr_ R:19-31,81-91,115-119 81. d.313.1 Prenyltransferase-like the barrel channel harbours the substrate-binding site ! Antiparallel beta/alpha barrel (PT-barrel) tandem repeat of five alpha(2)-beta(2) motifs; antiparallel beta-sheet barrel, closed; n=10, S=10; order 123456789A; there is a channel along the barrel axis 1zcw d1zcwa1 A:89-103,131-139,169-177 1zdy d1zdya1 A:89-103,131-139,169-177 1zdy d1zdya1 A:26-38,73-82,115-124 1zdw d1zdwa1 A:26-38,73-82,116-124 1zcw d1zcwa1 A:26-38,73-82,116-124 1zb6 d1zb6a1 A:26-38,73-82,116-124 83. d.166.1 ADP-ribosylation ADP-ribosylation unusual fold 1mdt d1mdta2 A:58-67,175-187,454-458 1mdt d1mdtb2 B:58-67,175-187,454-458 1f0l d1f0la2 A:58-67,175-187,454-458 1f0l d1f0lb2 B:58-67,175-187,454-458 3buz d3buza1 A:32-46,67-84,166-172 2a9k d2a9kb1 B:69-83,101-119,200-204 1g24 d1g24a_ A:69-83,101-119,200-204 1g24 d1g24d_ D:3069-3083,3101-3119,3200-3204 1g24 d1g24b_ B:1069-1083,1101-1119,1200-1204 1uzi d1uzib_ B:69-83,101-119,200-204 1g24 d1g24c_ C:2069-2083,2101-2119,2200-2204 1r4b d1r4bb_ B:69-83,101-119,199-203 1r45 d1r45b_ B:69-83,101-119,199-203 1r45 d1r45a_ A:69-83,101-119,199-203 1uzi d1uzia_ A:69-83,101-119,200-204 1r4b d1r4ba_ A:69-83,101-119,199-203 1gxz d1gxza_ A:68-81,102-117,175-179 1qs2 d1qs2a2 A:292-305,322-340,413-418 1gxy d1gxyb_ B:68-81,102-117,175-179 1ojq d1ojqa_ A:26-40,58-76,164-168 1gxz d1gxzb_ B:68-81,102-117,175-179 1qs1 d1qs1c2 C:2292-2305,2322-2340,2413-2418 1gxy d1gxya_ A:68-81,102-117,175-179 1gir d1gira1 A:32-46,45-56,135-139 1zm4 d1zm4d1 D:443-454,474-483,496-505 1giq d1giqb1 B:1032-1046,1045-1056,1135-1139 1zm9 d1zm9b1 B:443-454,474-483,496-505 1giq d1giqa1 A:32-46,45-56,135-139 1og4 d1og4a_ A:68-81,102-117,175-179 1zm3 d1zm3b1 B:443-454,474-483,496-505 1zm2 d1zm2b1 B:443-454,474-483,496-505 1qs1 d1qs1b2 B:1292-1305,1322-1340,1413-1418 1ikp d1ikpa2 A:443-454,474-483,496-505 3buz d3buza1 A:32-46,45-56,135-139 1zm3 d1zm3f1 F:443-454,474-483,496-505 1og1 d1og1a_ A:68-81,102-118,175-179 1zm2 d1zm2f1 F:443-454,474-483,496-505 4pax d4paxa2 A:865-876,900-909,915-927 1a26 d1a26a2 A:865-876,900-909,915-927 1wok d1wokd2 D:865-876,900-909,915-927 1dma d1dmaa_ A:443-454,474-484,496-505 1aer d1aera_ A:443-454,474-484,496-505 1zm4 d1zm4b1 B:443-454,474-484,496-505 1zm4 d1zm4f1 F:443-454,474-484,496-505 1zm2 d1zm2d1 D:443-454,474-484,496-505 1ikq d1ikqa2 A:443-454,474-484,496-505 1zm3 d1zm3d1 D:443-454,474-484,496-505 2a78 d2a78b1 B:69-83,101-119,196-204 1zm9 d1zm9f1 F:443-454,474-484,496-505 1gzf d1gzfa_ A:69-83,101-119,196-204 1xk9 d1xk9b1 B:443-454,474-484,496-505 1og1 d1og1a_ A:80-93,102-118,188-195 1r45 d1r45b_ B:82-94,101-119,212-219 1r45 d1r45a_ A:82-94,101-119,212-219 1qs1 d1qs1b2 B:1304-1318,1322-1340,1427-1434 1gir d1gira2 A:248-261,268-286,379-386 1qs2 d1qs2a1 A:87-100,119-136,228-236 1qs1 d1qs1c2 C:2304-2318,2322-2340,2427-2434 1giq d1giqb2 B:1248-1261,1268-1286,1379-1386 1r45 d1r45d_ D:69-83,101-119,195-203 1r45 d1r45c_ C:69-83,101-119,195-203 1giq d1giqa2 A:248-261,268-286,379-386 1r45 d1r45c_ C:82-94,101-119,212-219 1r4b d1r4ba_ A:82-94,101-119,212-219 1gze d1gzea_ A:69-83,101-119,196-204 1gzf d1gzfa_ A:82-94,101-119,213-220 1qs1 d1qs1d2 D:3304-3318,3322-3340,3427-3434 1r45 d1r45d_ D:82-94,101-119,212-219 1qs1 d1qs1a2 A:304-317,322-340,427-434 1og3 d1og3a_ A:80-93,102-117,188-195 2c8a d2c8aa1 A:82-94,101-119,213-220 3buz d3buza2 A:250-261,268-286,379-386 1qs2 d1qs2a2 A:304-318,322-340,427-434 1gy0 d1gy0a_ A:80-93,102-117,188-195 1r4b d1r4bb_ B:82-94,101-119,212-219 1gzf d1gzfd_ D:82-94,101-119,213-220 2c89 d2c89a1 A:82-94,101-119,213-220 2a9k d2a9kb1 B:82-94,101-119,213-220 1og4 d1og4a_ A:80-93,102-117,188-195 2c8a d2c8ab1 B:82-94,101-119,213-220 2a78 d2a78b1 B:82-94,101-119,213-220 2c8a d2c8ad1 D:82-94,101-119,213-220 1uzi d1uzia_ A:82-94,101-119,213-220 1gxy d1gxya_ A:80-93,102-117,188-195 1gzf d1gzfc_ C:82-94,101-119,213-220 1g24 d1g24a_ A:82-94,101-119,213-220 2c89 d2c89d1 D:82-94,101-119,213-220 1uzi d1uzib_ B:82-94,101-119,213-220 2c8a d2c8aa1 A:69-83,101-119,196-203 1gze d1gzed_ D:82-94,101-119,213-220 1g24 d1g24b_ B:1082-1094,1101-1119,1213-1220 1g24 d1g24d_ D:3082-3094,3101-3119,3213-3220 2c89 d2c89b1 B:82-94,101-119,213-220 1gxy d1gxyb_ B:80-93,102-117,188-195 1g24 d1g24c_ C:2082-2094,2101-2119,2213-2220 2c89 d2c89c1 C:82-94,101-119,213-220 1gze d1gzec_ C:82-94,101-119,213-220 2c89 d2c89a1 A:69-83,101-119,196-203 2c89 d2c89b1 B:69-83,101-119,196-203 2c8a d2c8ab1 B:69-83,101-119,196-203 1gze d1gzea_ A:82-94,101-119,213-220 2c8a d2c8ac1 C:82-94,101-119,213-220 1gxz d1gxza_ A:80-93,102-117,188-195 1gxz d1gxzb_ B:80-93,102-117,188-195 1gzf d1gzfb_ B:82-94,101-119,213-220 1ojz d1ojza_ A:39-51,58-76,179-186 1gze d1gzeb_ B:82-94,101-119,213-220 1gzf d1gzfb_ B:69-83,101-119,196-203 1ojq d1ojqa_ A:39-51,58-76,179-186 3buz d3buza2 A:236-249,250-261,334-341 1pwv d1pwva3 A:387-396,405-424,517-524 1pwp d1pwpa3 A:387-396,405-424,517-524 1pwv d1pwvb3 B:387-396,405-424,517-524 1j7n d1j7nb3 B:387-396,405-424,517-524 1zxv d1zxvb3 B:387-396,405-424,517-524 1pww d1pwwb3 B:387-396,405-424,517-524 1yqy d1yqya2 A:387-396,405-424,517-524 1pww d1pwwa3 A:387-396,405-424,517-524 1pwp d1pwpb3 B:387-396,405-424,517-524 1pwu d1pwub3 B:387-396,405-424,517-524 1pwq d1pwqb3 B:387-396,405-424,517-524 1pwv d1pwvb3 B:250-264,263-279,435-442 1zxv d1zxvb3 B:250-264,263-279,435-442 1pwq d1pwqb3 B:250-264,263-279,435-442 1pww d1pwwb3 B:250-264,263-279,435-442 1pwp d1pwpb3 B:250-264,263-279,435-442 1jky d1jkya3 A:251-264,263-279,436-442 1pwu d1pwub3 B:250-264,263-279,435-442 84. c.134.1 LmbE-like LmbE-like 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest; topological similarity to SAM-dependent methyltransferases 1q74 d1q74c_ C:13-22,230-245,247-251 1q7t d1q7tb_ B:13-22,230-245,247-251 1q7t d1q7ta_ A:13-22,230-245,262-267 1q7t d1q7tb_ B:13-22,230-245,262-267 1q74 d1q74a_ A:13-22,230-245,262-267 1q74 d1q74c_ C:13-22,230-245,262-267 1q74 d1q74d_ D:13-22,230-245,263-267 1q74 d1q74b_ B:13-22,230-245,263-267 1q7t d1q7tb_ B:62-80,230-245,247-251 1q74 d1q74c_ C:62-80,230-245,247-251 86. d.58.54 YbeD/HP0495-like Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2joq d2joqa1 A:30-41,68-83,84-90 1rwu d1rwua_ A:24-40,66-80,83-87 92. e.62.1 Heme iron utilization protein-like Heme iron utilization protein-like 2 domains; d1 - 3-helical bundle similar to the homeodomain-like fold; d2 - 6-stranded beta-barrel capped by two helices at one end, similar topology to the PH-like fold 2j0r d2j0ra1 A:181-192,194-206,287-297 2hq2 d2hq2a1 A:178-189,191-203,284-294 2j0p d2j0pa1 A:181-192,194-206,287-297 1u9t d1u9ta1 A:179-189,191-203,283-294 94. d.58.33 Formylmethanofuran:tetrahydromethanopterin formyltransferase duplication: contains two subdomains of this fold ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1m5s d1m5sc1 C:2029-2042,2080-2100,2101-2106 1ftr d1ftra1 A:29-42,81-101,102-108 2fhk d2fhka1 A:29-42,81-101,102-108 1ftr d1ftrb1 B:29-42,81-101,102-108 1ftr d1ftrc1 C:29-42,81-101,102-108 2fhk d2fhkb1 B:29-42,81-101,102-108 2fhj d2fhjb1 B:29-42,81-101,102-108 2fhj d2fhjc1 C:29-42,81-101,102-108 2fhk d2fhkd1 D:29-42,81-101,102-108 2fhk d2fhkc1 C:29-42,81-101,102-108 1ftr d1ftrd1 D:29-42,81-100,102-108 1m5s d1m5sa1 A:29-42,80-99,101-106 2fhj d2fhja1 A:29-42,81-100,102-108 2fhj d2fhjd1 D:29-42,81-100,102-108 1m5s d1m5sb1 B:1029-1042,1080-1099,1101-1106 1m5s d1m5sd1 D:3029-3042,3080-3099,3101-3106 1m5h d1m5he2 E:4172-4190,4253-4272,4273-4279 1m5s d1m5sd2 D:3172-3191,3253-3272,3273-3279 1m5s d1m5sb2 B:1172-1191,1253-1272,1273-1279 1m5s d1m5sc2 C:2172-2191,2253-2272,2273-2279 1m5h d1m5hb1 B:1029-1042,1080-1099,1101-1106 1m5h d1m5hd1 D:3029-3042,3080-3099,3101-3106 1m5s d1m5sa2 A:172-191,253-272,273-279 1m5h d1m5hc1 C:2029-2042,2080-2099,2101-2106 1m5h d1m5hf1 F:5029-5042,5080-5099,5101-5107 1m5h d1m5hg2 G:6172-6191,6253-6272,6273-6279 1m5h d1m5he1 E:4029-4042,4080-4099,4101-4106 1m5h d1m5hf2 F:5172-5191,5253-5272,5273-5279 1m5h d1m5ha2 A:172-191,253-272,273-279 1m5h d1m5hh1 H:7029-7042,7080-7099,7101-7106 1m5h d1m5ha1 A:29-42,80-99,101-106 1ftr d1ftrb2 B:175-194,252-271,272-278 1m5h d1m5hg1 G:6029-6042,6080-6099,6101-6106 1ftr d1ftrc2 C:175-194,252-271,272-278 1m5h d1m5hb2 B:1172-1191,1253-1272,1273-1279 1ftr d1ftra2 A:175-194,252-271,272-278 1ftr d1ftrd2 D:175-194,252-271,272-278 2fhj d2fhjb2 B:175-194,252-271,272-278 2fhj d2fhja2 A:175-194,252-271,272-278 1m5h d1m5hh2 H:7172-7191,7253-7272,7273-7279 1m5h d1m5hd2 D:3172-3191,3253-3272,3273-3279 1m5h d1m5hc2 C:2172-2191,2253-2272,2273-2279 2fhj d2fhjc2 C:175-194,252-271,272-279 2fhj d2fhjd2 D:175-194,252-271,272-279 2fhk d2fhkd2 D:175-194,252-271,272-279 2fhk d2fhkc2 C:175-194,252-271,272-279 2fhk d2fhkb2 B:175-194,252-271,272-279 2fhk d2fhka2 A:175-194,252-271,272-279 96. d.58.44 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains duplication: the N- and C-terminal halves of the whole proteins are structurally similar; each half contains two domains of this fold ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1oy8 d1oy8a3 A:583-603,643-659,661-667 1oye d1oyea3 A:583-603,643-659,661-667 1iwg d1iwga3 A:583-603,643-659,661-667 1oyd d1oyda3 A:583-603,643-659,661-667 1oy6 d1oy6a3 A:583-603,643-659,661-667 1oy9 d1oy9a3 A:583-603,643-659,661-667 1iwg d1iwga4 A:691-710,836-851,854-859 1oy6 d1oy6a4 A:691-710,836-851,854-859 1oye d1oyea4 A:691-710,836-851,854-859 1oy8 d1oy8a4 A:691-710,836-851,854-859 1oy9 d1oy9a4 A:691-710,836-851,854-859 1oyd d1oyda4 A:691-710,836-851,854-859 1oy8 d1oy8a2 A:150-163,310-317,319-329 1iwg d1iwga2 A:150-162,298-317,319-328 103. d.58.42 N-utilization substance G protein NusG, N-terminal domain Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1npp d1nppc3 C:22-38,146-157,158-163 1m1g d1m1ga3 A:22-38,146-157,158-163 1m1g d1m1gb3 B:22-38,146-156,158-163 1npr d1npra3 A:22-38,146-157,158-163 1npp d1nppd3 D:22-38,146-156,158-163 1npp d1nppb3 B:22-38,146-156,158-163 1npp d1nppa3 A:22-38,146-156,158-163 1m1g d1m1gd3 D:22-38,146-157,158-163 1m1g d1m1gc3 C:22-38,146-156,158-163 1m1h d1m1ha2 A:22-38,146-156,158-163 110. d.58.48 MTH1187/YkoF-like Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1s7h d1s7hb_ B:128-144,159-179,180-190 1sbr d1sbrb_ B:128-144,159-179,180-190 1sbr d1sbra_ A:128-144,159-179,180-190 1s99 d1s99a_ A:128-144,159-179,180-190 1s7h d1s7ha_ A:128-144,159-179,180-190 1s7h d1s7hc_ C:128-144,159-179,180-190 1s7h d1s7hd_ D:128-144,159-179,180-190 1yqh d1yqha1 A:19-35,50-69,70-81 1yqh d1yqhb1 B:19-35,50-69,70-81 1sbr d1sbrb_ B:23-36,54-73,75-85 1sbr d1sbra_ A:23-36,54-73,75-85 1s7h d1s7hd_ D:23-36,54-73,75-85 2ibo d2iboc1 C:14-33,48-68,68-79 1s99 d1s99a_ A:23-36,54-73,75-85 1s7h d1s7ha_ A:23-36,54-73,75-85 2ibo d2ibod1 D:14-33,48-68,68-79 1s7h d1s7hb_ B:23-36,54-73,75-85 1s7h d1s7hc_ C:23-36,54-73,75-85 1vk8 d1vk8c_ C:15-34,49-65,69-81 1vk8 d1vk8d_ D:15-34,49-69,69-81 1vk8 d1vk8b_ B:15-34,49-69,69-81 1vk8 d1vk8a_ A:15-34,49-69,69-81 1lxn d1lxnd_ D:3017-3033,3049-3068,3070-3082 1lxn d1lxna_ A:17-33,49-68,70-82 1lxn d1lxnb_ B:1017-1033,1049-1068,1070-1082 1lxn d1lxnc_ C:2017-2033,2049-2068,2070-2082 1lxj d1lxja_ A:21-37,52-71,74-83 2ibo d2iboa1 A:14-33,48-68,69-80 2ibo d2ibob1 B:14-33,48-68,69-80 111. d.273.1 YjbQ-like YjbQ-like beta(2)-alpha-beta(2)-alpha(2)-beta(3); contains a beta-sandwich: 7 strands in 2 sheets; trimerizes with orthogonally packed beta-sheets 1xbf d1xbfc_ C:56-72,83-94,111-120 1vmh d1vmha_ A:56-72,83-94,111-120 1xbf d1xbfb_ B:56-72,83-94,111-120 1vmf d1vmfa_ A:53-69,81-92,109-118 1vmf d1vmfc_ C:53-69,81-92,109-118 1vmf d1vmfb_ B:53-69,81-92,109-118 1vph d1vphd_ D:56-72,85-96,113-122 1vph d1vphb_ B:56-72,85-96,113-122 1vph d1vphc_ C:56-72,85-96,113-122 1vph d1vphe_ E:56-72,85-96,113-122 1vph d1vphf_ F:56-72,85-96,113-122 1vph d1vpha_ A:56-72,85-96,113-122 1xbf d1xbfa_ A:56-72,81-94,111-120 1vmj d1vmja_ A:56-72,86-99,118-125 114. d.58.19 Bacterial exopeptidase dimerisation domain Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1xmb d1xmba2 A:238-257,297-317,318-325 2q43 d2q43a2 A:217-236,276-296,297-304 1vix d1vixa2 A:233-246,283-305,309-322 1vix d1vixb2 B:233-246,283-305,309-322 1cg2 d1cg2c2 C:239-256,291-309,314-324 1cg2 d1cg2b2 B:239-256,291-309,314-324 1cg2 d1cg2d2 D:239-256,291-309,314-324 1cg2 d1cg2a2 A:239-256,291-309,314-324 1fno d1fnoa3 A:233-246,283-303,309-322 2imo d2imob2 B:239-259,293-316,317-332 1r43 d1r43b2 B:273-293,325-347,352-367 2imo d2imoa2 A:239-259,293-316,317-332 1r3n d1r3ne2 E:273-293,325-347,352-367 1r3n d1r3nc2 C:273-293,325-347,352-367 1r3n d1r3nb2 B:273-293,325-347,352-367 1r3n d1r3nf2 F:273-293,325-347,352-367 1r3n d1r3nh2 H:273-293,325-347,352-367 1r3n d1r3ng2 G:273-293,325-347,352-367 1r3n d1r3nd2 D:273-293,325-347,352-367 1z2l d1z2lb2 B:239-259,293-316,317-332 1r43 d1r43a2 A:273-293,325-347,352-367 1r3n d1r3na2 A:273-293,325-347,352-367 1ysj d1ysja2 A:201-214,257-280,281-296 1ysj d1ysjb2 B:201-214,257-280,281-296 1z2l d1z2la2 A:239-259,293-316,317-332 1lfw d1lfwa2 A:293-308,356-369,371-376 117. d.307.1 Nqo5-like Nqo5-like core: alpha-beta(2)-alpha-beta(3); 2 layers, a/b; mixed beta-sheet, order 12534, strands 2 and 5 are parallel 2fug d2fuge1 E:1-15,33-43,86-94 2fug d2fugw1 W:1-15,30-43,86-95 2fug d2fugn1 N:1-15,33-43,86-95 2fug d2fug51 5:1-15,33-43,86-95 119. d.213.1 VSV matrix protein VSV matrix protein beta-alpha(2)-beta(4)-alpha-beta(2); two layers: alpha/beta; bifurcated coiled beta-sheet: order of the first 5 strands: 23154 1lg7 d1lg7a_ A:101-116,198-209,209-215 122. d.58.25 Killer toxin KP6 alpha-subunit Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1kp6 d1kp6a_ A:27-35,57-69,70-77 124. d.52.2 GMP synthetase C-terminal dimerisation domain Alpha-lytic protease prodomain-like core: alpha-beta(2)-(alpha)-beta; 2 layers: alpha/beta 1gpm d1gpma3 A:417-439,489-505,508-514 1gpm d1gpmc3 C:417-439,489-505,509-514 1gpm d1gpmb3 B:417-439,489-505,508-514 1gpm d1gpmd3 D:417-439,489-505,509-514 133. d.326.1 XisI-like XisI-like alpha-beta(4)-alpha-beta-alpha; 2 layers, a/b; antiparallel beta-sheet, order 1234, meander; the open side of beta-sheet provides dimerization interface 2nvm d2nvma1 A:2-24,91-101,106-110 2nvm d2nvmb1 B:2-24,91-101,106-110 2nlv d2nlvb1 B:3-22,78-87,92-96 2nlv d2nlva1 A:0-22,78-87,92-96 2nwv d2nwva1 A:2-25,80-89,94-99 134. c.1.26 Homocysteine S-methyltransferase TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 1q8a d1q8ab2 B:21-30,42-57,59-67 1q8a d1q8aa2 A:21-30,42-57,59-67 1q7q d1q7qb2 B:21-30,42-57,59-67 3bof d3bofb2 B:21-30,42-57,59-67 1q8j d1q8jb2 B:21-30,42-57,59-67 1q7q d1q7qa2 A:21-30,42-57,59-67 3bof d3bofa2 A:21-30,42-57,59-67 1q7z d1q7za2 A:21-30,42-57,59-67 3bol d3bolb2 B:21-30,42-57,59-67 1q7z d1q7zb2 B:21-30,42-57,59-67 1q7m d1q7ma2 A:21-30,42-57,59-67 1q8j d1q8ja2 A:21-30,42-57,59-67 1q7m d1q7mb2 B:21-30,42-57,59-67 1q85 d1q85b2 B:21-30,42-57,59-67 1q85 d1q85a2 A:21-30,42-57,59-67 3bol d3bola2 A:21-30,42-57,59-67 1lt7 d1lt7a_ A:28-37,52-67,69-74 1lt7 d1lt7b_ B:28-37,52-67,69-74 1lt8 d1lt8a_ A:28-37,52-67,69-73 1lt8 d1lt8b_ B:28-37,52-67,69-73 136. c.123.1 CoA-transferase family III (CaiB/BaiF) CoA-transferase family III (CaiB/BaiF) consist of two different alpha/beta domains; N-terminal domain has a SurE-like topology with a left-handed beta-alpha-beta unit 1pqy d1pqya_ A:306-322,322-334,336-340 1q6y d1q6ya_ A:306-322,322-334,336-340 1xk7 d1xk7c1 C:252-264,304-316,317-322 1xa3 d1xa3b_ B:252-264,304-316,317-322 2gce d2gcea1 A:264-283,283-294,296-301 2gd6 d2gd6c1 C:264-283,283-294,296-301 2gd6 d2gd6a1 A:264-283,283-294,296-301 1xa3 d1xa3a_ A:252-264,304-316,317-322 2gci d2gcic1 C:264-283,283-294,296-301 1x74 d1x74c1 C:264-283,283-294,296-301 2gd2 d2gd2c1 C:264-283,283-294,296-301 2gd2 d2gd2a1 A:264-283,283-294,296-301 2gce d2gcec1 C:264-283,283-294,296-301 1x74 d1x74a1 A:264-283,283-294,296-301 2gci d2gcia1 A:264-283,283-294,296-301 1xk7 d1xk7a1 A:252-264,304-316,317-322 1xa4 d1xa4a_ A:252-264,304-316,317-322 1xk6 d1xk6c1 C:252-264,304-316,317-322 1xk6 d1xk6a1 A:252-264,304-316,317-322 1xvv d1xvva1 A:252-264,304-316,317-322 1xk6 d1xk6b1 B:252-264,304-316,317-322 1xa4 d1xa4b_ B:252-264,304-316,317-322 1xk7 d1xk7b1 B:252-264,304-316,317-322 1xk6 d1xk6d1 D:252-264,304-316,317-322 2gce d2gcea1 A:241-253,283-294,296-301 2gd6 d2gd6c1 C:241-253,283-294,296-301 2gd2 d2gd2b1 B:264-283,283-292,296-301 2gci d2gcia1 A:241-253,283-294,296-301 2gce d2gcec1 C:241-253,283-294,296-301 2gd6 d2gd6a1 A:241-253,283-294,296-301 2gd2 d2gd2d1 D:264-283,283-292,296-301 2gd6 d2gd6d1 D:264-283,283-292,296-301 2gd2 d2gd2c1 C:241-253,283-294,296-301 2gd6 d2gd6b1 B:264-283,283-292,296-301 2gci d2gcic1 C:241-253,283-294,296-301 2gd0 d2gd0d1 D:264-283,283-292,296-301 2gd0 d2gd0b1 B:264-283,283-292,296-301 1x74 d1x74d1 D:264-283,283-292,296-301 2gci d2gcib1 B:264-283,283-292,296-301 1x74 d1x74c1 C:241-253,283-294,296-301 1x74 d1x74b1 B:264-283,283-292,296-301 2gd2 d2gd2a1 A:241-253,283-294,296-301 2gci d2gcid1 D:264-283,283-292,296-301 2gce d2gced1 D:264-283,283-292,296-301 1x74 d1x74a1 A:241-253,283-294,296-301 2gce d2gceb1 B:264-283,283-292,296-301 2gd0 d2gd0a1 A:264-283,283-292,296-301 2gd0 d2gd0c1 C:264-283,283-292,296-301 1vgr d1vgrb_ B:288-297,332-344,346-350 1pt8 d1pt8b_ B:273-285,320-332,334-338 1q7e d1q7ea_ A:275-287,322-334,336-340 1pqy d1pqya_ A:275-287,322-334,336-340 1pt8 d1pt8a_ A:276-285,320-332,334-338 1pt5 d1pt5a_ A:276-285,320-332,334-338 1pt5 d1pt5b_ B:276-285,320-332,334-338 1t3z d1t3zb_ B:288-297,332-344,346-350 1pt7 d1pt7b_ B:273-285,320-332,334-338 1vgq d1vgqb_ B:288-297,332-344,346-350 2vjk d2vjkb1 B:285-297,332-344,346-350 1q6y d1q6ya_ A:278-287,322-334,336-340 1p5h d1p5hb_ B:288-297,332-344,346-350 1t4c d1t4cb_ B:285-297,332-344,346-350 2vjl d2vjlb1 B:288-297,332-344,346-350 1p5r d1p5rb_ B:288-297,332-344,346-350 1pt7 d1pt7a_ A:276-285,320-332,334-338 1t4c d1t4ca_ A:288-297,332-344,346-350 1p5r d1p5ra_ A:288-297,332-344,346-350 2vjl d2vjla1 A:285-297,332-344,346-350 2vjk d2vjka1 A:285-297,332-344,346-350 1t3z d1t3za_ A:288-297,332-344,346-350 1p5h d1p5ha_ A:288-297,332-344,346-350 2vjm d2vjma1 A:288-297,332-344,346-350 138. d.52.6 BolA-like Alpha-lytic protease prodomain-like core: alpha-beta(2)-(alpha)-beta; 2 layers: alpha/beta 1ny8 d1ny8a_ A:6-19,46-59,68-76 1v9j d1v9ja_ A:31-44,75-88,95-103 140. d.58.32 FAD-linked oxidases, C-terminal domain duplication: contains two subdomains of this fold ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1f0x d1f0xa1 A:285-300,397-415,417-422 1dzn d1dzna1 A:285-303,360-379,380-386 1dzn d1dznb1 B:285-303,360-379,380-386 1f0x d1f0xb1 B:1285-1300,1397-1415,1417-1422 2vao d2vaob1 B:285-303,360-379,380-385 2vao d2vaoa1 A:285-303,360-379,380-385 1ahv d1ahva1 A:285-303,360-379,380-386 1ahv d1ahvb1 B:285-303,360-379,380-386 1qlt d1qltb1 B:285-303,360-379,380-385 1ahu d1ahub1 B:285-303,360-379,380-385 1ahu d1ahua1 A:285-303,360-379,380-385 1e8f d1e8fa1 A:285-303,360-379,380-385 1e8f d1e8fb1 B:285-303,360-379,380-385 1ahz d1ahza1 A:285-303,360-379,380-386 1ahz d1ahzb1 B:285-303,360-379,380-386 1qlu d1qlub1 B:285-303,360-379,380-385 1qlt d1qlta1 A:285-303,360-379,380-385 1qlu d1qlua1 A:285-303,360-379,380-385 1w1s d1w1sa1 A:404-420,465-485,487-491 1w1l d1w1la1 A:285-303,360-379,380-385 1vao d1vaob1 B:285-303,360-379,380-385 1vao d1vaoa1 A:285-303,360-379,380-385 1w1r d1w1ra1 A:404-420,465-485,487-491 1e8h d1e8hb1 B:285-303,360-379,380-385 1e8h d1e8ha1 A:285-303,360-379,380-385 1w1q d1w1qa1 A:404-420,465-485,487-491 1w1k d1w1ka1 A:285-303,360-379,380-385 1w1m d1w1ma1 A:285-303,360-379,380-385 1w1o d1w1oa1 A:404-420,465-485,487-491 1e0y d1e0yb1 B:285-303,360-379,380-385 1w1j d1w1ja1 A:285-303,360-379,380-385 1e0y d1e0ya1 A:285-303,360-379,380-385 1w1j d1w1jb1 B:285-303,360-379,380-386 1w1m d1w1mb1 B:285-303,360-379,380-386 1w1k d1w1kb1 B:285-303,360-379,380-385 1e8g d1e8ga1 A:285-297,360-379,380-385 1e8g d1e8gb1 B:285-297,360-379,380-385 1i19 d1i19b1 B:440-466,523-542,546-550 2i0k d2i0ka1 A:440-466,523-542,546-550 1w1l d1w1lb1 B:285-297,360-379,380-386 1i19 d1i19a1 A:440-466,523-543,546-550 1wvf d1wvfa1 A:254-272,330-349,351-355 1w1s d1w1sa1 A:296-305,376-389,425-435 1w1q d1w1qa1 A:296-305,376-389,425-435 1w1r d1w1ra1 A:296-305,376-389,425-435 1w1o d1w1oa1 A:296-305,376-389,425-435 142. d.358.1 YdfO-like YdfO-like duplication: two alpha(2)-beta(3) motifs are related by pseudo twofold symmetry; single antiparrallel beta-sheet, order:321456 2hh8 d2hh8a1 A:7-23,24-37,37-45 2hh8 d2hh8a1 A:75-90,92-104,124-131 144. c.1.27 (2r)-phospho-3-sulfolactate synthase ComA TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 1qwg d1qwga_ A:74-85,86-98,100-105 1u83 d1u83a_ A:78-88,89-101,103-108 145. c.1.1 Triosephosphate isomerase (TIM) TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 1m6j d1m6jb_ B:102-110,112-127,128-136 3ypi d3ypib_ B:95-103,105-120,121-129 1hti d1htia_ A:95-103,105-120,121-129 3tim d3timb_ B:95-103,105-120,121-129 1r2r d1r2rc_ C:95-103,105-120,121-129 1r2r d1r2rd_ D:95-103,105-120,121-129 1r2t d1r2ta_ A:95-103,105-120,121-129 1r2s d1r2sc_ C:95-103,105-120,121-129 1r2t d1r2tb_ B:95-103,105-120,121-129 1tsi d1tsib_ B:95-103,105-120,121-129 1ml1 d1ml1k_ K:95-103,105-120,121-130 1ml1 d1ml1g_ G:95-103,105-120,121-130 1ml1 d1ml1c_ C:95-103,105-120,121-130 1ml1 d1ml1a_ A:95-103,105-120,121-130 1ml1 d1ml1i_ I:95-103,105-120,121-130 1ml1 d1ml1e_ E:95-103,105-120,121-130 1r2s d1r2sa_ A:95-103,105-120,121-129 2oma d2omaa1 A:96-104,106-120,122-131 1r2s d1r2sb_ B:95-103,105-120,121-129 1mo0 d1mo0b_ B:94-102,104-119,120-129 2jk2 d2jk2b1 B:95-103,105-120,121-129 1dkw d1dkwb_ B:95-103,105-120,121-129 5tim d5tima_ A:95-103,105-120,121-129 1iih d1iiha_ A:95-103,105-120,121-129 1su5 d1su5a_ A:95-103,105-120,121-130 1tpu d1tpua_ A:95-103,105-120,121-130 1tpf d1tpfa_ A:95-103,105-120,121-129 1ssd d1ssdb_ B:95-103,105-120,121-130 1tpf d1tpfb_ B:95-103,105-120,121-129 2jk2 d2jk2a1 A:95-103,105-120,121-129 1mo0 d1mo0a_ A:94-102,104-119,120-129 2v5l d2v5la1 A:95-103,105-120,121-129 8tim d8tima_ A:95-103,105-120,121-130 3tim d3tima_ A:95-103,105-120,121-129 1ssg d1ssga_ A:95-103,105-120,121-130 1tsi d1tsia_ A:95-103,105-120,121-130 1ssd d1ssda_ A:95-103,105-120,121-130 1r2s d1r2sd_ D:95-103,105-120,121-130 1tcd d1tcdb_ B:96-104,106-121,122-130 1kv5 d1kv5b_ B:95-103,105-120,121-130 1ssg d1ssgb_ B:95-103,105-120,121-130 1su5 d1su5b_ B:95-103,105-120,121-130 6tim d6tima_ A:95-103,105-120,121-129 2v5l d2v5lb1 B:395-403,405-420,421-429 4tim d4tima_ A:95-103,105-120,121-129 1kv5 d1kv5a_ A:95-103,105-120,121-130 1ney d1neyb_ B:95-103,105-120,121-130 1tpu d1tpub_ B:95-103,105-120,121-130 1sw7 d1sw7b_ B:95-103,105-120,121-130 1tpd d1tpdb_ B:95-103,105-120,121-129 1mss d1mssa_ A:95-103,105-120,121-129 1r2r d1r2rb_ B:95-103,105-120,121-130 1tpe d1tpea_ A:95-103,105-120,121-129 1n55 d1n55a_ A:95-103,105-120,121-130 1hti d1htib_ B:95-103,105-120,121-130 1ag1 d1ag1o_ O:95-103,105-120,121-130 1dkw d1dkwa_ A:95-103,105-120,121-129 1amk d1amka_ A:95-103,105-120,121-130 1tti d1ttia_ A:95-103,105-120,121-130 1tpv d1tpva_ A:95-103,105-120,121-130 1tcd d1tcda_ A:96-104,106-121,122-131 1sux d1suxa_ A:96-104,106-121,122-131 1ag1 d1ag1t_ T:95-103,105-120,121-130 5tim d5timb_ B:95-103,105-120,121-130 1ney d1neya_ A:95-103,105-120,121-130 1tpb d1tpb1_ 1:95-103,105-120,121-130 1sq7 d1sq7a_ A:95-103,105-120,121-130 1tpw d1tpwb_ B:95-103,105-120,121-130 1sw7 d1sw7a_ A:95-103,105-120,121-130 1iig d1iigb_ B:395-403,405-420,421-430 1ci1 d1ci1a_ A:96-104,106-121,122-131 1tpv d1tpvb_ B:95-103,105-120,121-130 1mss d1mssb_ B:95-103,105-120,121-130 1tpc d1tpc1_ 1:95-103,105-120,121-130 1tpb d1tpb2_ 2:95-103,105-120,121-130 1tph d1tph2_ 2:95-103,105-120,121-130 6tim d6timb_ B:95-103,105-120,121-130 1tpd d1tpda_ A:95-103,105-120,121-130 1qds d1qdsa_ A:95-103,105-120,121-130 1tph d1tph1_ 1:95-103,105-120,121-130 1sw3 d1sw3a_ A:95-103,105-120,121-130 7tim d7timb_ B:95-103,105-120,121-130 1trd d1trdb_ B:95-103,105-120,121-130 1o5x d1o5xa_ A:95-103,105-120,121-129 1tpc d1tpc2_ 2:95-103,105-120,121-130 1iig d1iiga_ A:95-103,105-120,121-130 1sw3 d1sw3b_ B:95-103,105-120,121-130 1tri d1tria_ A:94-103,105-120,121-130 1ttj d1ttja_ A:95-103,105-120,121-130 1if2 d1if2a_ A:95-103,105-120,121-130 7tim d7tima_ A:95-103,105-120,121-130 1sw0 d1sw0b_ B:95-103,105-120,121-130 4tim d4timb_ B:95-103,105-120,121-130 1tpw d1tpwa_ A:95-103,105-120,121-130 1o5x d1o5xb_ B:95-103,105-120,121-129 1spq d1spqb_ B:95-103,105-120,121-130 1sw0 d1sw0a_ A:95-103,105-120,121-130 1ypi d1ypia_ A:95-103,105-120,121-130 2ypi d2ypia_ A:95-103,105-120,121-130 1nf0 d1nf0b_ B:95-103,105-120,121-130 1iih d1iihb_ B:395-403,405-420,421-430 1spq d1spqa_ A:95-103,105-120,121-130 1trd d1trda_ A:95-103,105-120,121-130 3ypi d3ypia_ A:95-103,105-120,121-130 1ydv d1ydva_ A:95-103,105-120,121-129 1b9b d1b9ba_ A:96-104,106-121,122-131 1woa d1woac_ C:95-103,105-120,121-130 1woa d1woaa_ A:95-103,105-120,121-130 1lyx d1lyxa_ A:95-103,105-120,121-130 2ypi d2ypib_ B:95-103,105-120,121-130 1aw1 d1aw1a_ A:97-105,107-122,123-132 1aw1 d1aw1j_ J:97-105,107-122,123-132 1aw1 d1aw1g_ G:97-105,107-122,123-132 1m6j d1m6ja_ A:102-110,112-127,128-135 1aw1 d1aw1d_ D:97-105,107-122,123-132 1woa d1woab_ B:95-103,105-120,121-130 1tre d1treb_ B:97-105,107-122,123-132 1woa d1woad_ D:95-103,105-120,121-130 1ypi d1ypib_ B:95-103,105-120,121-128 1tre d1trea_ A:97-105,107-122,123-132 1tim d1timb_ B:95-103,105-120,121-130 1aw1 d1aw1b_ B:97-105,107-122,123-132 1aw1 d1aw1k_ K:97-105,107-122,123-132 1wyi d1wyia1 A:95-103,105-120,121-128 1aw1 d1aw1e_ E:97-105,107-122,123-132 1aw1 d1aw1h_ H:97-105,107-122,123-132 1r2r d1r2ra_ A:95-103,105-120,121-128 1tmh d1tmhc_ C:97-105,107-122,123-132 1wyi d1wyib1 B:95-103,105-120,121-128 1i45 d1i45b_ B:95-103,105-120,121-128 1b9b d1b9bb_ B:596-604,606-621,622-631 8tim d8timb_ B:95-103,105-120,121-128 1tmh d1tmha_ A:97-105,107-122,123-132 1i45 d1i45a_ A:95-103,105-120,121-128 2oma d2omab1 B:96-104,106-120,122-129 1ydv d1ydvb_ B:95-103,105-120,121-130 1btm d1btmb_ B:94-102,104-119,120-129 1sux d1suxb_ B:96-104,106-121,122-129 1tmh d1tmhb_ B:97-105,107-122,123-132 1ci1 d1ci1b_ B:96-104,106-121,122-129 1tmh d1tmhd_ D:97-105,107-122,123-132 2btm d2btmb_ B:94-102,104-119,120-129 2btm d2btma_ A:94-102,104-119,120-129 1nf0 d1nf0a_ A:95-103,105-120,121-128 1btm d1btma_ A:94-102,104-119,120-129 1sq7 d1sq7b_ B:95-103,105-120,121-128 1aw2 d1aw2d_ D:97-105,107-122,123-130 1aw2 d1aw2a_ A:97-105,107-122,123-130 1aw2 d1aw2j_ J:97-105,107-122,123-130 1aw2 d1aw2g_ G:97-105,107-122,123-130 1aw2 d1aw2b_ B:97-105,107-122,123-130 1aw2 d1aw2e_ E:97-105,107-122,123-130 1aw2 d1aw2h_ H:97-105,107-122,123-130 1aw2 d1aw2k_ K:97-105,107-122,123-130 1wob d1wobc_ C:95-103,105-120,121-128 1wob d1woba_ A:95-103,105-120,121-128 1m7p d1m7pb_ B:95-103,105-120,121-128 1lzo d1lzoa_ A:95-103,105-120,121-128 1wob d1wobd_ D:95-103,105-120,121-128 1wob d1wobb_ B:95-103,105-120,121-128 1lzo d1lzod_ D:95-103,105-120,121-128 1lzo d1lzob_ B:95-103,105-120,121-128 1m7p d1m7pa_ A:95-103,105-120,121-128 1m7o d1m7oa_ A:95-103,105-120,121-128 1vga d1vgac_ C:95-103,105-120,121-128 1vga d1vgad_ D:95-103,105-120,121-128 1vga d1vgaa_ A:95-103,105-120,121-128 1m7o d1m7ob_ B:95-103,105-120,121-128 1vga d1vgab_ B:95-103,105-120,121-128 1lzo d1lzoc_ C:95-103,105-120,121-128 146. b.2.6 Cytochrome f, large domain Common fold of diphtheria toxin/transcription factors/cytochrome f sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold 1e2z d1e2zc1 C:1-10,19-26,69-77 1e2z d1e2zb1 B:1-10,19-26,70-77 1ewh d1ewha1 A:1-10,19-26,69-77 1ewh d1ewhc1 C:1-10,19-26,69-77 1e2w d1e2wa1 A:1-10,19-26,69-77 1cfm d1cfmc1 C:1-10,19-26,69-77 1ewh d1ewhb1 B:1-10,19-26,69-77 1e2z d1e2za1 A:1-10,19-26,69-77 1cfm d1cfmb1 B:1-10,19-26,69-77 1e2w d1e2wb1 B:1-10,19-26,69-77 1e2v d1e2vb1 B:301-310,319-326,369-377 1cfm d1cfma1 A:1-10,19-26,69-77 1e2v d1e2vc1 C:601-610,619-626,669-677 1q90 d1q90a1 A:1-10,19-26,69-77 1e2v d1e2va1 A:1-10,19-26,69-77 1tu2 d1tu2b1 B:1-10,20-27,70-78 1vf5 d1vf5p1 P:1-10,20-27,70-79 1vf5 d1vf5c1 C:1-10,20-27,70-79 149. c.118.1 GckA/TtuD-like GckA/TtuD-like consists of two non-similar domains ! Domain 1 has parallel sheet of 6 strands, order 321456, Rossmann-like topology ! Domain 2 has mixed sheet of 6 strands, order 126345; strands 5 and 6 are antiparallel to the rest; some similarity to CbiF Domain 2 2b8n d2b8nb1 B:4-23,250-266,304-314 2b8n d2b8na1 A:4-23,250-266,304-314 2b8n d2b8na1 A:4-23,250-266,342-351 2b8n d2b8nb1 B:4-23,250-266,342-351 152. d.58.51 eIF-2-alpha, C-terminal domain Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2aho d2ahob3 B:191-205,238-258,259-264 2qn6 d2qn6b1 B:191-205,235-258,259-264 2qmu d2qmub1 B:191-205,235-258,259-265 1q8k d1q8ka2 A:200-219,242-265,266-272 157. c.96.1 Fe-only hydrogenase Fe-only hydrogenase consist of two intertwined domains; contains partial duplication 1c4a d1c4aa1 A:411-419,419-437,492-498 1c4c d1c4ca1 A:411-419,419-437,492-498 3c8y d3c8ya1 A:411-419,419-437,492-498 1feh d1feha1 A:411-419,419-437,492-498 1hfe d1hfel1 L:290-298,298-316,371-377 1hfe d1hfem1 M:290-298,298-316,371-377 1feh d1feha1 A:267-290,323-335,346-353 3c8y d3c8ya1 A:267-290,323-335,346-353 1c4c d1c4ca1 A:267-290,323-335,346-353 1c4a d1c4aa1 A:267-289,323-335,346-353 166. d.227.1 OsmC-like OsmC-like swapped dimer of beta(3)-alpha-beta(2)-alpha(2)-beta subunits; mixed beta-sheet; order: 321[4][5][6]; buried helix 2pn2 d2pn2a1 A:41-66,101-115,125-132 2d7v d2d7va1 A:64-89,131-146,154-161 2d7v d2d7vb1 B:64-89,131-146,154-161 2onf d2onfb1 B:41-66,105-120,130-139 2onf d2onfa1 A:41-66,105-120,130-139 1ukk d1ukka_ A:45-70,108-123,133-142 1qwi d1qwib_ B:47-72,110-125,133-143 1ukk d1ukkb_ B:45-70,108-123,133-142 1qwi d1qwid_ D:47-72,110-125,133-143 1qwi d1qwia_ A:47-72,110-125,133-143 1ml8 d1ml8a_ A:35-60,97-114,123-134 1nye d1nyef_ F:1067-1092,1130-1145,1153-1162 1qwi d1qwic_ C:47-72,110-125,133-143 1nye d1nyed_ D:667-692,730-745,753-763 1nye d1nyee_ E:867-892,930-945,953-963 1nye d1nyeb_ B:267-292,330-345,353-362 1nye d1nyec_ C:467-492,530-545,553-563 1nye d1nyea_ A:67-92,130-145,153-162 1n2f d1n2fa_ A:48-73,109-124,135-142 1ml8 d1ml8a_ A:35-60,113-124,123-134 1n2f d1n2fb_ B:48-73,109-124,135-142 170. d.59.1 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e core: beta-alpha-beta-alpha-beta; antiparallel beta-sheet: order 312; some similarity to the ferredoxin-like fold 1yit d1yitw1 W:14-25,38-51,51-56 1yjw d1yjww1 W:14-25,38-51,51-56 1yij d1yijw1 W:14-25,38-51,51-56 1vq4 d1vq4w1 W:14-25,38-51,51-56 1q86 d1q86x_ X:14-25,38-51,51-56 1yjn d1yjnw1 W:14-25,38-51,51-56 1yi2 d1yi2w1 W:14-25,38-51,51-56 1kqs d1kqsv_ V:14-25,38-51,51-56 1kd1 d1kd1x_ X:14-25,38-51,51-56 1q82 d1q82x_ X:14-25,38-51,51-56 1k8a d1k8ax_ X:14-25,38-51,51-56 1m90 d1m90x_ X:14-25,38-51,51-56 2otl d2otlw1 W:14-25,38-51,51-56 1k9m d1k9mx_ X:14-25,38-51,51-56 1jj2 d1jj2v_ V:14-25,38-51,51-56 1kc8 d1kc8x_ X:14-25,38-51,51-56 1k73 d1k73x_ X:14-25,38-51,51-56 1nji d1njix_ X:14-25,38-51,51-56 1xbp d1xbpx1 X:13-24,37-48,50-54 2qov d2qovy1 Y:16-27,40-51,53-58 2qox d2qoxy1 Y:16-27,40-51,53-58 3dll d3dllw1 W:13-24,37-48,50-55 2gyc d2gycx1 X:16-27,40-51,53-58 2qp1 d2qp1y1 Y:16-27,40-51,53-58 2qoz d2qozy1 Y:16-27,40-51,53-58 2gya d2gyax1 X:16-27,40-51,53-58 1q81 d1q81x_ X:14-25,38-49,51-56 1ffk d1ffkt_ T:14-25,38-49,51-56 1q7y d1q7yx_ X:14-25,38-49,51-56 1vq6 d1vq6w1 W:14-25,38-49,51-56 1n8r d1n8rx_ X:14-25,38-49,51-56 1yj9 d1yj9w1 W:14-25,38-49,51-56 1vq7 d1vq7w1 W:14-25,38-49,51-56 1qvg d1qvgv_ V:14-25,38-49,51-56 1vq8 d1vq8w1 W:14-25,38-49,51-56 1vql d1vqlw1 W:14-25,38-49,51-56 1vqm d1vqmw1 W:14-25,38-49,51-56 2otj d2otjw1 W:14-25,38-49,51-56 1vq5 d1vq5w1 W:14-25,38-49,51-56 1m1k d1m1kx_ X:14-25,38-49,51-56 1vqp d1vqpw1 W:14-25,38-49,51-56 1s72 d1s72w_ W:14-25,38-49,51-56 1qvf d1qvfv_ V:14-25,38-49,51-56 1vqn d1vqnw1 W:14-25,38-49,51-56 1vqk d1vqkw1 W:14-25,38-49,51-56 1yhq d1yhqw1 W:14-25,38-49,51-56 1vqo d1vqow1 W:14-25,38-49,51-56 1vq9 d1vq9w1 W:14-25,38-49,51-56 2qbc d2qbcy1 Y:16-27,40-51,53-58 2qba d2qbay1 Y:16-27,40-51,53-58 2j01 d2j0131 3:16-27,40-51,53-59 2j03 d2j0331 3:16-27,40-51,53-59 2zjq d2zjqw1 W:13-24,37-48,50-55 2qbk d2qbky1 Y:16-27,40-51,53-58 2qbi d2qbiy1 Y:16-27,40-51,53-58 2zjr d2zjrw1 W:13-24,37-48,50-55 3cf5 d3cf5w1 W:13-24,37-48,50-55 2qbg d2qbgy1 Y:16-27,40-51,53-58 2qbe d2qbey1 Y:16-27,40-51,53-58 2zjp d2zjpw1 W:13-24,37-48,50-55 3df4 d3df4y1 Y:16-27,40-51,53-58 3df2 d3df2y1 Y:16-27,40-51,53-58 2i2v d2i2vz1 Z:16-27,40-51,53-58 2i2t d2i2tz1 Z:16-27,40-51,53-58 2qam d2qamy1 Y:16-27,40-51,53-58 2qao d2qaoy1 Y:16-27,40-51,53-58 2z4l d2z4ly1 Y:16-27,40-51,53-58 2z4n d2z4ny1 Y:16-27,40-51,53-58 2b66 d2b6631 3:16-27,40-51,53-59 2b9n d2b9n31 3:16-27,40-51,53-59 2b9p d2b9p31 3:16-27,40-51,53-59 1yl3 d1yl3x1 X:16-27,40-51,53-59 171. d.149.1 Nitrile hydratase alpha chain duplication: contains two structural repeats ! Nitrile hydratase alpha chain 4 layers a/b/b/a; inside is a sandwich of two 2-stranded beta-sheets 1ugq d1ugqa_ A:51-66,65-76,92-98 2ahj d2ahja_ A:52-67,66-77,93-99 1ugs d1ugsa_ A:51-66,65-76,92-98 1ugr d1ugra_ A:51-66,65-76,92-98 1ahj d1ahje_ E:53-68,67-78,94-100 1ahj d1ahja_ A:53-68,67-78,94-100 1ahj d1ahjg_ G:53-68,67-78,94-100 1ahj d1ahjc_ C:53-68,67-78,94-100 1ire d1irea_ A:51-66,65-76,92-98 1v29 d1v29a_ A:63-78,77-88,104-110 2ahj d2ahjc_ C:52-67,66-77,93-99 1ugp d1ugpa_ A:51-66,65-76,92-98 2cz0 d2cz0a1 A:52-67,66-77,93-99 2d0q d2d0qa1 A:52-67,66-77,93-99 2cz1 d2cz1a1 A:52-67,66-77,93-99 2cz7 d2cz7a1 A:52-67,66-77,93-99 2cz6 d2cz6a1 A:52-67,66-77,93-99 2cyz d2cyza1 A:52-67,66-77,93-99 2qdy d2qdya1 A:53-68,67-78,94-100 2ahj d2ahja_ A:52-67,66-77,166-172 2cz1 d2cz1a1 A:52-67,66-77,166-172 2cz6 d2cz6a1 A:52-67,66-77,166-172 2cyz d2cyza1 A:52-67,66-77,166-172 2ahj d2ahjc_ C:52-67,66-77,166-172 2cz7 d2cz7a1 A:52-67,66-77,166-172 2cz0 d2cz0a1 A:52-67,66-77,166-172 2qdy d2qdya1 A:53-68,67-78,167-173 1ahj d1ahja_ A:53-68,67-78,167-173 1ahj d1ahje_ E:53-68,67-78,167-173 2d0q d2d0qa1 A:52-67,66-77,166-172 1ahj d1ahjc_ C:53-68,67-78,167-173 1ahj d1ahjg_ G:53-68,67-78,167-173 1ugs d1ugsa_ A:51-66,65-76,166-172 1ugq d1ugqa_ A:51-66,65-76,166-172 1ugp d1ugpa_ A:51-66,65-76,166-172 1ire d1irea_ A:51-66,65-76,166-172 1ugr d1ugra_ A:51-66,65-76,166-172 1v29 d1v29a_ A:63-78,77-88,177-183 1ugq d1ugqa_ A:51-66,75-84,92-98 1ugp d1ugpa_ A:51-66,75-84,92-98 1ire d1irea_ A:51-66,75-84,92-98 1ugs d1ugsa_ A:51-66,75-84,92-98 1ugr d1ugra_ A:51-66,75-84,92-98 1v29 d1v29a_ A:63-78,87-96,104-110 2ahj d2ahja_ A:52-67,76-85,93-99 2d0q d2d0qa1 A:52-67,76-85,93-99 2cz0 d2cz0a1 A:52-67,76-85,93-99 2cz1 d2cz1a1 A:52-67,76-85,93-99 2cz7 d2cz7a1 A:52-67,76-85,93-99 2qdy d2qdya1 A:53-68,77-86,94-100 2cz6 d2cz6a1 A:52-67,76-85,93-99 2cyz d2cyza1 A:52-67,76-85,93-99 2ahj d2ahjc_ C:52-67,76-85,93-99 1ahj d1ahje_ E:53-68,77-86,94-100 1ahj d1ahjg_ G:53-68,77-86,94-100 1ahj d1ahja_ A:53-68,77-86,94-100 1ahj d1ahjc_ C:53-68,77-86,94-100 172. d.58.55 DOPA-like probable biological unit is homodimer; the extra C-terminal strand, adjacent and antiparallel to strand 4, contributes to the dimerisation interface ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2p8i d2p8ia1 A:22-38,67-80,82-90 2p8i d2p8id1 D:22-38,67-80,82-90 2p8i d2p8ic1 C:19-38,67-80,82-90 2nyh d2nyha1 A:19-38,67-80,82-90 2nyh d2nyhb1 B:19-38,67-80,82-90 173. c.56.6 LigB-like circular permutation of the common fold, most similar to the PNP fold ! Phosphorylase/hydrolase-like core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops 2pw6 d2pw6a1 A:191-207,222-230,262-271 1bou d1boub_ B:99-114,161-180,183-191 1bou d1boud_ D:99-114,161-180,183-191 1b4u d1b4ub_ B:99-114,161-180,183-191 1b4u d1b4ud_ D:99-114,161-180,183-191 2pw6 d2pw6a1 A:94-106,148-166,166-173 175. d.365.1 Ava3019-like Ava3019-like alpha(2)-beta-alpha-beta(4); 2 layers, a/b; antiparallel beta-sheet, order: 32145; similarity to the insert domain of Glucose 6-phosphate dehydrogenase-like family (sop_fa 55376) 2q22 d2q22a1 A:10-22,31-50,126-133 2q22 d2q22c1 C:10-22,31-50,126-133 2q22 d2q22b1 B:10-22,31-50,126-133 179. e.39.1 YebC-like YebC-like 3 domains: (1) 3-helical bundle; (2 and 3 ) alpha+beta of different folds: domain 3 has a ferredoxin-like fold and is inserted in domain 2 1kon d1kona_ A:105-121,209-227,228-236 1lfp d1lfpa_ A:105-121,211-229,230-238 1mw7 d1mw7a_ A:101-117,212-230,231-238 181. d.142.1 Glutathione synthetase ATP-binding domain-like ATP-grasp Consists of two subdomains with different alpha+beta folds ! shares functional and structural similarities with the PIPK and protein kinase superfamilies 1vkz d1vkza3 A:85-95,229-251,254-266 1vkz d1vkzb3 B:85-95,229-251,254-266 2pbz d2pbza2 A:89-99,220-243,248-257 2pbz d2pbzc2 C:89-99,220-243,248-257 2pbz d2pbzb2 B:89-99,220-243,248-257 1glv d1glva2 A:123-132,248-266,268-276 2nu8 d2nu8b2 B:4-16,170-192,192-205 2nu8 d2nu8e2 E:4-16,170-192,192-205 2nu7 d2nu7b2 B:4-16,170-192,192-205 2nu7 d2nu7e2 E:4-16,170-192,192-205 2nu6 d2nu6e2 E:4-16,170-192,192-205 1gso d1gsoa3 A:95-105,240-263,266-278 1jkj d1jkjb2 B:4-16,170-192,192-205 1jkj d1jkje2 E:4-16,170-192,192-205 2nu6 d2nu6b2 B:4-16,170-192,192-205 1jll d1jllb2 B:4-16,170-192,192-205 1jll d1jlle2 E:4-16,170-192,192-205 2nua d2nuae2 E:4-16,170-192,192-205 2nu9 d2nu9b2 B:4-16,170-192,192-205 2nu9 d2nu9e2 E:4-16,170-192,192-205 2nua d2nuab2 B:4-16,170-192,192-205 2nu9 d2nu9i2 I:4-16,170-192,192-205 2nu9 d2nu9g2 G:4-16,170-192,192-205 1scu d1scue2 E:4-16,170-192,192-205 1scu d1scub2 B:4-16,170-192,192-205 2pbz d2pbzb2 B:98-110,220-243,248-257 2scu d2scub2 B:4-16,170-192,192-205 1glv d1glva2 A:115-123,248-266,268-276 2pbz d2pbza2 A:98-110,220-243,248-257 2pbz d2pbzc2 C:98-110,220-243,248-257 1aux d1auxb2 B:224-240,350-363,368-378 1aux d1auxa2 A:224-240,350-363,368-378 2scu d2scue2 E:4-16,170-192,192-205 1auv d1auvb2 B:224-240,350-363,368-378 1cqj d1cqje2 E:4-16,170-192,192-205 1kjq d1kjqb3 B:104-114,240-259,261-272 1cqj d1cqjb2 B:4-16,170-192,192-205 1auv d1auva2 A:224-240,350-363,368-378 1jde d1jdea3 A:20-33,298-317,319-328 2r7n d2r7na2 A:124-136,264-287,292-302 1pk8 d1pk8b2 B:224-240,350-363,368-378 1pk8 d1pk8d2 D:224-240,350-363,368-378 1pk8 d1pk8h2 H:224-240,350-363,368-378 1eyz d1eyza3 A:104-114,240-259,261-272 1kjq d1kjqa3 A:104-114,240-259,261-272 1ez1 d1ez1b3 B:104-114,240-259,261-272 1cqi d1cqib2 B:4-16,170-192,192-205 1i7n d1i7na2 A:225-241,351-364,369-379 1kji d1kjib3 B:104-114,240-259,261-272 1kj9 d1kj9a3 A:104-114,240-259,261-272 1cqi d1cqie2 E:4-16,170-192,192-205 1kjj d1kjja3 A:104-114,240-259,261-272 1ez1 d1ez1a3 A:104-114,240-259,261-272 1pk8 d1pk8f2 F:224-240,350-363,368-378 1eyz d1eyzb3 B:104-114,240-259,261-272 1pk8 d1pk8g2 G:224-240,350-363,368-378 2fp4 d2fp4b2 B:4-16,177-199,199-212 1kj9 d1kj9b3 B:104-114,240-259,261-272 1kj8 d1kj8b3 B:104-114,240-259,261-272 1i7n d1i7nb2 B:225-241,351-364,369-379 1ce8 d1ce8e6 E:665-675,802-821,823-834 1pk8 d1pk8a2 A:224-240,350-363,368-378 2fpg d2fpgb2 B:4-16,177-199,199-212 1c30 d1c30c6 C:665-675,802-821,823-834 2r85 d2r85b2 B:91-101,238-261,264-275 1pk8 d1pk8e2 E:224-240,350-363,368-378 1m6v d1m6vc6 C:665-675,802-821,823-834 1kji d1kjia3 A:104-114,240-259,261-272 1kj8 d1kj8a3 A:104-114,240-259,261-272 1m6v d1m6ve6 E:665-675,802-821,823-834 1m6v d1m6vg6 G:665-675,802-821,823-834 1pk8 d1pk8c2 C:224-240,350-363,368-378 1a9x d1a9xc6 C:2665-2675,2802-2821,2823-2834 1kjj d1kjjb3 B:104-114,240-259,261-272 2r85 d2r85a2 A:91-101,238-261,264-275 1a9x d1a9xe6 E:4665-4675,4802-4821,4823-4834 1cs0 d1cs0g6 G:665-675,802-821,823-834 1ce8 d1ce8g6 G:665-675,802-821,823-834 1a9x d1a9xg6 G:6665-6675,6802-6821,6823-6834 1ce8 d1ce8a6 A:665-675,802-821,823-834 1c30 d1c30a6 A:665-675,802-821,823-834 1uc9 d1uc9b2 B:79-89,215-230,232-241 1cs0 d1cs0e6 E:665-675,802-821,823-834 1cs0 d1cs0c6 C:665-675,802-821,823-834 1c30 d1c30g6 G:665-675,802-821,823-834 1jdb d1jdbe6 E:664-674,801-820,822-833 1c3o d1c3oc6 C:665-675,802-821,823-834 1px2 d1px2a2 A:224-240,350-363,368-378 2r7m d2r7ma2 A:124-136,264-287,292-302 1c30 d1c30e6 E:665-675,802-821,823-834 2fpi d2fpib2 B:4-16,177-199,199-212 1px2 d1px2b2 B:224-240,350-363,368-378 1jdb d1jdbk6 K:664-674,801-820,822-833 2r84 d2r84b2 B:91-101,238-261,265-275 1c3o d1c3og6 G:665-675,802-821,823-834 1i7l d1i7lb2 B:225-241,351-364,369-379 1ggo d1ggoa3 A:20-33,298-317,319-328 1i7l d1i7la2 A:225-241,351-364,369-379 1ce8 d1ce8c6 C:665-675,802-821,823-834 1kee d1keec6 C:665-675,802-821,823-834 2r7k d2r7ka2 A:124-136,264-287,292-302 1c3o d1c3oa6 A:665-675,802-821,823-834 2gpw d2gpwb3 B:106-116,249-268,270-281 1bxr d1bxra6 A:665-675,802-821,823-834 2r7n d2r7na2 A:115-125,264-287,292-302 1kee d1keeg6 G:665-675,802-821,823-834 1m6v d1m6va6 A:665-675,802-821,823-834 2r84 d2r84a2 A:91-101,238-261,264-275 2dik d2dika3 A:20-33,298-317,319-328 1a9x d1a9xa6 A:665-675,802-821,823-834 1kee d1keee6 E:665-675,802-821,823-834 2r86 d2r86a2 A:91-101,238-261,264-275 1t36 d1t36e6 E:665-675,802-821,823-834 1cs0 d1cs0a6 A:665-675,802-821,823-834 3eth d3ethb3 B:70-80,199-218,220-231 1jdb d1jdbb6 B:664-674,801-820,822-833 1t36 d1t36c6 C:665-675,802-821,823-834 1c3o d1c3oe6 E:665-675,802-821,823-834 1dik d1dika3 A:20-33,298-317,319-328 1t36 d1t36a6 A:665-675,802-821,823-834 1uc8 d1uc8b2 B:79-89,215-230,232-242 1kc7 d1kc7a3 A:20-33,298-317,319-328 1uc8 d1uc8a2 A:79-89,215-230,232-242 2r7l d2r7la2 A:124-136,264-287,292-302 1bxr d1bxrg6 G:665-675,802-821,823-834 2r84 d2r84b2 B:100-112,238-261,265-275 2r7k d2r7ka2 A:115-125,264-287,292-302 1bxr d1bxre6 E:665-675,802-821,823-834 2r86 d2r86b2 B:91-101,238-261,264-275 1kee d1keea6 A:665-675,802-821,823-834 1jdb d1jdbh6 H:664-674,801-820,822-833 2r7l d2r7la2 A:115-125,264-287,292-302 2r87 d2r87e2 E:100-112,238-261,265-275 2r87 d2r87d2 D:100-112,238-261,265-275 2fpp d2fppb2 B:4-16,177-199,199-212 1b6s d1b6sb3 B:70-80,199-218,220-231 2r87 d2r87c2 C:100-112,238-261,265-275 3eth d3etha3 A:70-80,199-218,220-231 1bxr d1bxrc6 C:665-675,802-821,823-834 1t36 d1t36g6 G:665-675,802-821,823-834 2r87 d2r87f2 F:100-112,238-261,265-275 2vr1 d2vr1a3 A:106-116,249-268,270-281 2r7m d2r7ma2 A:115-125,264-287,292-302 3etj d3etja3 A:70-80,199-218,220-231 2gpw d2gpwa3 A:106-116,249-268,270-281 1b6s d1b6sd3 D:70-80,199-218,220-231 1kbl d1kbla3 A:20-33,298-317,319-328 3etj d3etjb3 B:70-80,199-218,220-231 1uc9 d1uc9a2 A:79-89,215-230,232-242 1b6s d1b6sa3 A:70-80,199-218,220-231 2j9g d2j9ga3 A:106-116,249-268,269-281 1euc d1eucb2 B:4-16,177-199,199-212 2vr1 d2vr1b3 B:106-116,249-268,269-281 1ulz d1ulza3 A:105-115,247-266,269-279 2r87 d2r87a2 A:91-101,238-261,264-275 2gpw d2gpwd3 D:106-116,249-268,269-281 2gpw d2gpwc3 C:106-116,249-268,269-281 1b6s d1b6sc3 C:70-80,199-218,220-231 2r87 d2r87b2 B:91-101,238-261,264-275 1e4e d1e4eb2 B:123-133,265-284,287-297 2j9g d2j9gb3 B:106-116,249-268,269-281 1ehi d1ehia2 A:126-136,276-295,298-308 1bnc d1bncb3 B:106-116,249-268,269-281 1iov d1iova2 A:87-97,230-249,252-262 2gps d2gpsb3 B:106-116,249-268,269-281 2r86 d2r86a2 A:100-112,238-261,264-275 1ulz d1ulza3 A:114-126,247-266,269-279 1eud d1eudb2 B:4-16,177-199,199-212 1dv1 d1dv1a3 A:106-116,249-268,269-281 1dv2 d1dv2b3 B:106-116,249-268,269-281 1e4e d1e4ea2 A:123-133,265-284,287-297 1jdb d1jdbh5 H:118-128,256-275,277-290 1dv1 d1dv1b3 B:106-116,249-268,269-281 1jdb d1jdbe5 E:118-128,256-275,277-290 1m6v d1m6vg5 G:119-129,257-276,278-291 1ehi d1ehib2 B:526-536,676-695,698-708 1c30 d1c30c5 C:119-129,257-276,278-291 1jdb d1jdbk5 K:118-128,256-275,277-290 1b6r d1b6ra3 A:70-80,199-218,220-231 2gps d2gpsa3 A:106-116,249-268,269-281 1cs0 d1cs0e5 E:119-129,257-276,278-291 1bnc d1bnca3 A:106-116,249-268,269-281 1cs0 d1cs0c5 C:119-129,257-276,278-291 2r86 d2r86b2 B:100-112,238-261,264-275 1c3o d1c3oe5 E:119-129,257-276,278-291 1ce8 d1ce8c5 C:119-129,257-276,278-291 1t36 d1t36e5 E:119-129,257-276,278-291 1dv2 d1dv2a3 A:106-116,249-268,269-281 1c3o d1c3oc5 C:119-129,257-276,278-291 1ce8 d1ce8g5 G:119-129,257-276,278-291 1m6v d1m6vc5 C:119-129,257-276,278-291 1ce8 d1ce8a5 A:119-129,257-276,278-291 1c30 d1c30e5 E:119-129,257-276,278-291 1c30 d1c30g5 G:119-129,257-276,278-291 1cs0 d1cs0g5 G:119-129,257-276,278-291 1a9x d1a9xg5 G:6119-6129,6257-6276,6278-6291 1t36 d1t36g5 G:119-129,257-276,278-291 1c3o d1c3og5 G:119-129,257-276,278-291 1m6v d1m6ve5 E:119-129,257-276,278-291 1t36 d1t36c5 C:119-129,257-276,278-291 1c30 d1c30a5 A:119-129,257-276,278-291 1ce8 d1ce8e5 E:119-129,257-276,278-291 1cs0 d1cs0a5 A:119-129,257-276,278-291 1c3o d1c3oa5 A:119-129,257-276,278-291 2dln d2dlna2 A:87-97,230-249,252-262 1a9x d1a9xe5 E:4119-4129,4257-4276,4278-4291 1kee d1keec5 C:119-129,257-276,278-291 1a9x d1a9xc5 C:2119-2129,2257-2276,2278-2291 1kee d1keeg5 G:119-129,257-276,278-291 1bxr d1bxra5 A:119-129,257-276,278-291 1t36 d1t36a5 A:119-129,257-276,278-291 1jdb d1jdbb5 B:118-128,256-275,277-290 2glt d2glta2 A:123-132,248-259,268-276 1kee d1keee5 E:119-129,257-276,278-291 1bxr d1bxrg5 G:119-129,257-276,278-291 1kee d1keea5 A:119-129,257-276,278-291 1gsh d1gsha2 A:123-132,248-259,268-276 1a9x d1a9xa5 A:119-129,257-276,278-291 1gsa d1gsaa2 A:123-132,248-259,268-276 1bxr d1bxrc5 C:119-129,257-276,278-291 1m6v d1m6va5 A:119-129,257-276,278-291 1bxr d1bxre5 E:119-129,257-276,278-291 1iow d1iowa2 A:87-97,230-249,252-262 1w96 d1w96a3 A:185-197,338-357,359-371 1m0t d1m0ta2 A:64-82,315-323,440-453 1m0w d1m0wb2 B:1064-1082,1315-1323,1438-1453 1m0w d1m0wa2 A:54-82,315-323,438-453 1m0t d1m0tb2 B:1054-1082,1315-1323,1438-1453 182. d.329.1 PF0523-like PF0523-like beta-alpha-beta-alpha(3)-beta-alpha-beta-alpha; 3 layers, a/b/a; antiparallel beta-sheet, order 4132; some similarity to the PurM C-terminal domain-like fold (scop_cf 56041) 1zd0 d1zd0a1 A:48-66,72-83,99-107 183. d.193.1 Hsp33 domain Hsp33 domain 3 layers: beta/alpha/beta; buried helix 1vq0 d1vq0a1 A:20-31,33-54,150-162 1vq0 d1vq0b1 B:20-31,33-54,150-162 1vzy d1vzya1 A:21-33,35-57,153-165 1vzy d1vzyb1 B:22-33,35-57,154-165 1hw7 d1hw7a_ A:27-35,40-61,153-164 191. d.58.13 Anticodon-binding domain of PheRS Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2aly d2alyb5 B:706-719,757-776,777-783 1jjc d1jjcb4 B:706-719,757-776,777-784 1pys d1pysb4 B:706-719,757-776,777-783 2akw d2akwb5 B:706-719,757-776,777-781 2amc d2amcb5 B:706-719,757-776,777-781 201. d.103.1 CytB endotoxin-like CytB endotoxin-like core: beta-alpha(2)-beta-alpha(2)-beta(4); 3 layers: a/b/a 1cby d1cbya_ A:50-68,76-87,182-197 1pp6 d1pp6e_ E:4014-4032,4042-4053,4148-4162 1pp6 d1pp6d_ D:3014-3032,3042-3053,3148-3163 1vgf d1vgfa_ A:14-32,42-53,148-162 1pp6 d1pp6c_ C:2014-2032,2042-2054,2148-2162 1vgf d1vgfb_ B:1014-1032,1042-1053,1148-1162 1pp0 d1pp0a_ A:14-32,42-53,148-162 1pp6 d1pp6b_ B:1014-1032,1042-1053,1148-1164 1pp6 d1pp6a_ A:14-32,42-53,148-164 1pp0 d1pp0c_ C:2014-2032,2042-2053,2148-2162 1pp0 d1pp0d_ D:3014-3032,3042-3053,3148-3162 1pp0 d1pp0b_ B:1014-1032,1042-1053,1148-1162 1vcy d1vcya_ A:14-32,42-53,148-162 1pp6 d1pp6c_ C:2014-2032,2042-2054,2057-2070 202. e.28.1 Reovirus inner layer core protein p3 Reovirus inner layer core protein p3 large protein without apparent domain division; has a number of all-alpha regions and one all beta domain near the C-end 2btv d2btva_ A:745-756,755-769,799-808 2btv d2btvb_ B:27-51,333-350,566-571 1uf2 d1uf2b_ B:296-311,349-367,631-637 2btv d2btvb_ B:27-51,333-350,352-357 1uf2 d1uf2a_ A:296-311,349-367,631-637 1uf2 d1uf2b_ B:31-53,245-257,260-264 1uf2 d1uf2b_ B:296-311,349-367,369-375 1uf2 d1uf2a_ A:296-311,349-367,369-375 206. d.128.1 Glutamine synthetase/guanido kinase Glutamine synthetase/guanido kinase duplication: common core consists of two beta-alpha-beta2-alpha repeats 2lgs d2lgsl2 L:188-203,227-250,251-255 2lgs d2lgsa2 A:188-203,227-250,251-255 2lgs d2lgsh2 H:188-203,227-250,251-255 2lgs d2lgsi2 I:188-203,227-250,251-255 2lgs d2lgsk2 K:188-203,227-250,251-255 2lgs d2lgsc2 C:188-203,227-250,251-255 2lgs d2lgsb2 B:188-203,227-250,251-255 2lgs d2lgsd2 D:188-203,227-250,251-255 2lgs d2lgsg2 G:188-203,227-250,251-255 2lgs d2lgse2 E:188-203,227-250,251-255 2lgs d2lgsj2 J:188-203,227-250,251-255 2lgs d2lgsf2 F:188-203,227-250,251-255 1lgr d1lgrk2 K:188-203,227-250,251-255 1lgr d1lgrb2 B:188-203,227-250,251-255 1lgr d1lgri2 I:188-203,227-250,251-255 1lgr d1lgrg2 G:188-203,227-250,251-255 1lgr d1lgrh2 H:188-203,227-250,251-255 1lgr d1lgre2 E:188-203,227-250,251-255 1lgr d1lgra2 A:188-203,227-250,251-255 1lgr d1lgrc2 C:188-203,227-250,251-255 1lgr d1lgrf2 F:188-203,227-250,251-255 1lgr d1lgrl2 L:188-203,227-250,251-255 1lgr d1lgrj2 J:188-203,227-250,251-255 1lgr d1lgrd2 D:188-203,227-250,251-255 2gls d2glsi2 I:188-203,227-250,251-255 2gls d2glsb2 B:188-203,227-250,251-255 2gls d2glsc2 C:188-203,227-250,251-255 2gls d2glsl2 L:188-203,227-250,251-255 2gls d2glsf2 F:188-203,227-250,251-255 2gls d2glse2 E:188-203,227-250,251-255 2gls d2glsa2 A:188-203,227-250,251-255 2gls d2glsh2 H:188-203,227-250,251-255 2gls d2glsj2 J:188-203,227-250,251-255 2gls d2glsg2 G:188-203,227-250,251-255 2gls d2glsk2 K:188-203,227-250,251-255 2gls d2glsd2 D:188-203,227-250,251-255 1hto d1htoc2 C:188-203,227-250,251-255 1hto d1htor2 R:188-203,227-250,251-255 1hto d1htow2 W:188-203,227-250,251-255 1hto d1hton2 N:188-203,227-250,251-255 1hto d1htol2 L:188-203,227-250,251-255 1hto d1htoo2 O:188-203,227-250,251-255 1hto d1htod2 D:188-203,227-250,251-255 1hto d1htob2 B:188-203,227-250,251-255 1hto d1htok2 K:188-203,227-250,251-255 1hto d1htoh2 H:188-203,227-250,251-255 1hto d1htos2 S:188-203,227-250,251-255 1hto d1htog2 G:188-203,227-250,251-255 1hto d1htox2 X:188-203,227-250,251-255 1hto d1htov2 V:188-203,227-250,251-255 1hto d1htoi2 I:188-203,227-250,251-255 1hto d1htoa2 A:188-203,227-250,251-255 1hto d1htom2 M:188-203,227-250,251-255 1hto d1htop2 P:188-203,227-250,251-255 1hto d1htou2 U:188-203,227-250,251-255 1hto d1htot2 T:188-203,227-250,251-255 1hto d1htoj2 J:188-203,227-250,251-255 1hto d1htof2 F:188-203,227-250,251-255 1hto d1htoe2 E:188-203,227-250,251-255 1hto d1htoq2 Q:188-203,227-250,251-255 1fpy d1fpyf2 F:188-203,227-250,251-255 1fpy d1fpyb2 B:188-203,227-250,251-255 1fpy d1fpyi2 I:188-203,227-250,251-255 1fpy d1fpya2 A:188-203,227-250,251-255 1fpy d1fpye2 E:188-203,227-250,251-255 1fpy d1fpyj2 J:188-203,227-250,251-255 1fpy d1fpyl2 L:188-203,227-250,251-255 1fpy d1fpyc2 C:188-203,227-250,251-255 1fpy d1fpyk2 K:188-203,227-250,251-255 1fpy d1fpyd2 D:188-203,227-250,251-255 1fpy d1fpyh2 H:188-203,227-250,251-255 1fpy d1fpyg2 G:188-203,227-250,251-255 1htq d1htqd2 D:188-203,227-250,251-255 1htq d1htqi2 I:188-203,227-250,251-255 1htq d1htql2 L:188-203,227-250,251-255 1htq d1htqx2 X:188-203,227-250,251-255 1htq d1htqj2 J:188-203,227-250,251-255 1htq d1htqo2 O:188-203,227-250,251-255 1htq d1htqv2 V:188-203,227-250,251-255 1htq d1htqs2 S:188-203,227-250,251-255 1htq d1htqc2 C:188-203,227-250,251-255 1htq d1htqw2 W:188-203,227-250,251-255 1htq d1htqh2 H:188-203,227-250,251-255 1htq d1htqn2 N:188-203,227-250,251-255 1htq d1htqq2 Q:188-203,227-250,251-255 1htq d1htqe2 E:188-203,227-250,251-255 1htq d1htqg2 G:188-203,227-250,251-255 1htq d1htqr2 R:188-203,227-250,251-255 1htq d1htqu2 U:188-203,227-250,251-255 1htq d1htqf2 F:188-203,227-250,251-255 1htq d1htqt2 T:188-203,227-250,251-255 1htq d1htqm2 M:188-203,227-250,251-255 1htq d1htqk2 K:188-203,227-250,251-255 1htq d1htqp2 P:188-203,227-250,251-255 1htq d1htqa2 A:188-203,227-250,251-255 1htq d1htqb2 B:188-203,227-250,251-255 1tt4 d1tt4b_ B:33-45,68-91,92-96 2bvc d2bvca2 A:195-210,234-257,258-262 2bvc d2bvce2 E:195-210,234-257,258-262 2bvc d2bvcf2 F:195-210,234-257,258-262 1f1h d1f1hk2 K:186-203,227-250,251-255 1f1h d1f1hh2 H:186-203,227-250,251-255 1f1h d1f1hi2 I:186-203,227-250,251-255 1f1h d1f1ha2 A:186-203,227-250,251-255 1f1h d1f1he2 E:186-203,227-250,251-255 1f1h d1f1hc2 C:186-203,227-250,251-255 1f1h d1f1hb2 B:186-203,227-250,251-255 1f1h d1f1hf2 F:186-203,227-250,251-255 1f1h d1f1hj2 J:186-203,227-250,251-255 1f1h d1f1hg2 G:186-203,227-250,251-255 1f1h d1f1hl2 L:186-203,227-250,251-255 1f1h d1f1hd2 D:186-203,227-250,251-255 1f52 d1f52j2 J:186-203,227-250,251-255 1f52 d1f52d2 D:186-203,227-250,251-255 1f52 d1f52b2 B:186-203,227-250,251-255 1f52 d1f52c2 C:186-203,227-250,251-255 1f52 d1f52a2 A:186-203,227-250,251-255 1f52 d1f52f2 F:186-203,227-250,251-255 1f52 d1f52l2 L:186-203,227-250,251-255 1f52 d1f52e2 E:186-203,227-250,251-255 1f52 d1f52g2 G:186-203,227-250,251-255 1f52 d1f52h2 H:186-203,227-250,251-255 1f52 d1f52k2 K:186-203,227-250,251-255 1f52 d1f52i2 I:186-203,227-250,251-255 209. d.377.1 Rv2827c C-terminal domain-like Rv2827c C-terminal domain-like multihelical array flanked by two three-stranded mixed beta-sheets 1zel d1zelb2 B:224-239,240-251,278-283 1zel d1zela2 A:224-239,240-251,278-283 210. d.225.1 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains duplication: the N- and C-terminal halves of the whole proteins are structurally similar ! Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Intertwined pseudo hexamer of an alpha+beta motif 1iwg d1iwga5 A:199-212,242-249,756-765 1oyd d1oyda5 A:199-212,242-249,756-765 1oy8 d1oy8a6 A:189-197,742-756,789-794 1oy6 d1oy6a5 A:199-212,242-249,756-765 1oye d1oyea5 A:199-212,242-249,756-765 1oy8 d1oy8a5 A:199-212,242-249,756-765 1oy9 d1oy9a5 A:199-212,242-249,756-765 1iwg d1iwga6 A:189-197,742-756,789-794 1oy9 d1oy9a6 A:189-197,742-756,789-794 1oyd d1oyda6 A:189-197,742-756,789-794 1oye d1oyea6 A:189-197,742-756,789-794 1oy6 d1oy6a6 A:189-197,742-756,789-794 1oy9 d1oy9a6 A:742-756,782-790,796-801 1oyd d1oyda6 A:742-756,782-790,796-801 1oye d1oyea6 A:742-756,782-790,796-801 216. d.316.1 MK0786-like probable biological unit is a teramer; all subunit interfaces are provided by helices ! MK0786-like alpha(2)-beta(4); 2 layers: a/b; antiparallel beta-sheet, order 1234 (meander) 2i52 d2i52a1 A:12-33,41-57,58-67 2iec d2iecd1 D:12-33,38-56,58-67 2iec d2iecc1 C:12-33,38-56,58-67 2i52 d2i52f1 F:12-33,38-57,58-67 2i52 d2i52b1 B:12-33,38-57,58-67 2iec d2ieca1 A:12-33,38-57,58-67 2i52 d2i52d1 D:12-33,38-57,58-67 2iec d2iecb1 B:12-33,38-57,58-67 2i52 d2i52e1 E:12-33,38-57,58-67 2i52 d2i52c1 C:12-33,38-57,58-67 220. c.1.24 Pyridoxine 5'-phosphate synthase TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 1ixq d1ixqa_ A:155-162,164-186,187-193 1ixq d1ixqb_ B:155-162,164-186,187-193 1ho1 d1ho1c_ C:155-162,164-186,187-193 1ixp d1ixpd_ D:155-162,164-186,187-193 1ho1 d1ho1a_ A:155-162,164-186,187-193 1ho1 d1ho1d_ D:155-162,164-186,187-193 1ixq d1ixqc_ C:155-162,164-186,187-193 1ho1 d1ho1d_ D:155-162,196-207,210-215 1ixo d1ixod_ D:155-162,196-207,209-215 1ixp d1ixpc_ C:155-162,196-207,210-215 1ho1 d1ho1c_ C:155-162,196-207,210-215 1m5w d1m5wg_ G:155-162,196-207,209-215 1ho1 d1ho1b_ B:155-162,196-207,210-215 1ixq d1ixqc_ C:155-162,196-207,210-215 1m5w d1m5wf_ F:155-162,196-207,210-215 1m5w d1m5wd_ D:155-162,196-207,209-215 1ixp d1ixpa_ A:155-162,196-207,210-215 1m5w d1m5we_ E:155-162,196-207,209-215 1ixq d1ixqd_ D:155-162,196-207,210-215 1m5w d1m5wh_ H:155-162,196-207,209-215 1ixp d1ixpb_ B:155-162,196-207,210-215 1m5w d1m5wb_ B:155-162,196-207,210-215 1m5w d1m5wg_ G:10-21,26-38,40-46 1ixn d1ixnb_ B:10-21,26-38,40-46 1ixq d1ixqd_ D:10-21,26-38,40-46 1m5w d1m5wd_ D:10-21,26-38,40-46 1ho1 d1ho1a_ A:10-21,26-38,40-46 1ixp d1ixpa_ A:10-21,26-38,40-46 1ixq d1ixqb_ B:10-21,26-38,40-46 1ixn d1ixnd_ D:10-21,26-38,40-46 1ixo d1ixob_ B:10-21,26-38,40-46 1ixp d1ixpd_ D:10-21,26-38,40-46 1ho1 d1ho1d_ D:10-21,26-38,40-46 1ho1 d1ho1b_ B:10-21,26-38,40-46 1ixq d1ixqa_ A:10-21,26-38,40-46 1ho1 d1ho1c_ C:10-21,26-38,40-46 1ixo d1ixoc_ C:10-21,26-38,40-46 1ixp d1ixpc_ C:10-21,26-38,40-46 1ixo d1ixod_ D:10-21,26-38,40-46 1ixq d1ixqc_ C:10-21,26-38,40-46 1ixn d1ixnc_ C:10-21,26-38,40-46 1ixo d1ixoa_ A:10-21,26-38,40-46 1ixn d1ixna_ A:10-21,26-38,40-46 1ixp d1ixpb_ B:10-21,26-38,40-46 1m5w d1m5wb_ B:10-21,26-38,40-46 1m5w d1m5wa_ A:10-21,26-38,40-46 1m5w d1m5we_ E:10-21,26-38,40-46 1m5w d1m5wh_ H:10-21,26-38,40-46 1ho4 d1ho4d_ D:10-21,26-38,40-46 1m5w d1m5wc_ C:10-21,26-38,40-46 1m5w d1m5wf_ F:10-21,26-38,40-46 1ho4 d1ho4b_ B:10-21,26-38,40-46 1ho4 d1ho4c_ C:10-21,26-38,40-46 1ho4 d1ho4a_ A:10-21,26-38,40-46 224. d.154.1 DmpA/ArgJ-like convergent similarity to the Ntn amidohydrolases ! DmpA/ArgJ-like duplication of beta(3)-alpha-beta-alpha motif; 4 layers: alpha/beta/beta/alpha 1vz8 d1vz8c_ C:289-299,302-314,323-329 1vz7 d1vz7d_ D:289-299,302-314,323-329 1vz8 d1vz8d_ D:289-299,302-314,323-329 1vz8 d1vz8a_ A:289-299,302-314,323-329 1vz8 d1vz8b_ B:289-299,302-314,323-329 1vz6 d1vz6b_ B:289-299,302-314,323-329 1vz6 d1vz6a_ A:289-299,302-314,323-329 1vz7 d1vz7c_ C:289-299,302-314,323-329 1vz7 d1vz7a_ A:289-299,302-314,323-329 1vz7 d1vz7b_ B:289-299,302-314,323-329 226. d.58.12 eEF-1beta-like Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1ijf d1ijfb_ B:1135-1147,1180-1192,1194-1206 1f60 d1f60b_ B:1135-1147,1180-1192,1194-1206 2b7c d2b7cb1 B:1135-1147,1180-1192,1194-1206 1g7c d1g7cb_ B:1135-1147,1180-1192,1194-1206 2b7b d2b7bb1 B:1135-1147,1180-1192,1194-1206 1ije d1ijeb_ B:1135-1147,1180-1192,1194-1206 234. c.1.20 tRNA-guanine transglycosylase TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 1iq8 d1iq8a1 A:196-204,233-244,246-251 1it8 d1it8a1 A:196-204,233-244,246-251 1j2b d1j2bb2 B:196-204,233-244,246-251 1j2b d1j2ba2 A:196-204,233-244,246-251 1it8 d1it8a1 A:97-105,138-160,163-169 1it8 d1it8b1 B:97-105,138-160,163-169 2qzr d2qzra1 A:103-112,164-190,196-203 1j2b d1j2bb2 B:97-105,138-160,163-169 1j2b d1j2ba2 A:97-105,138-160,163-169 1s39 d1s39a_ A:103-111,164-190,196-203 1s38 d1s38a_ A:103-111,164-190,196-203 1q66 d1q66a_ A:103-111,164-190,196-203 1q65 d1q65a_ A:103-111,164-190,196-203 1p0e d1p0ea_ A:103-112,164-190,196-203 1q2s d1q2sb_ B:103-112,164-190,196-203 1n2v d1n2va_ A:103-112,164-190,196-203 1q2s d1q2sd_ D:103-112,164-190,196-203 1ozm d1ozma_ A:103-112,164-190,196-203 1q2s d1q2sa_ A:104-112,164-190,196-203 1wkd d1wkda_ A:103-112,164-190,196-203 1ozq d1ozqa_ A:103-112,164-190,196-203 1q2s d1q2sc_ C:104-112,164-190,196-203 1q2r d1q2rc_ C:104-112,164-190,196-203 1wke d1wkea_ A:103-112,164-190,196-203 1q2r d1q2ra_ A:104-112,164-190,196-203 1k4g d1k4ga_ A:103-112,164-190,196-203 1y5x d1y5xa1 A:103-112,164-190,196-203 1q2r d1q2rb_ B:104-112,164-190,196-203 1q2r d1q2rd_ D:104-112,164-190,196-203 1q4w d1q4wa_ A:103-112,164-190,196-203 2bbf d2bbfa1 A:104-111,164-190,196-203 1p0b d1p0ba_ A:104-112,164-190,196-203 2pwu d2pwua1 A:104-112,164-190,196-203 2qii d2qiia1 A:104-112,164-190,196-203 1y5x d1y5xd1 D:1103-1113,1164-1190,1196-1203 237. d.280.1 Sulfolobus fructose-1,6-bisphosphatase-like Sulfolobus fructose-1,6-bisphosphatase-like 4 layers: a/b/b/a; antiparallel beta sheets; similarities to ferredoxin-like fold (scop_cf 54861) in the N-terminal part (1-120) and to the Bacterial S-adenosylmethionine decarboxylase subunit (scop_fa 997656) in the C-terminal part (121-340) 1umg d1umga_ A:135-149,247-258,290-301 1umg d1umga_ A:135-149,247-258,267-276 238. d.52.7 Ribosome-binding factor A, RbfA possible distant homologue of the type I KH domain lacking the KH motif ! Alpha-lytic protease prodomain-like core: alpha-beta(2)-(alpha)-beta; 2 layers: alpha/beta 1pa4 d1pa4a_ A:7-25,55-82,87-92 2e7g d2e7ga1 A:86-111,159-171,177-182 2r1c d2r1ca1 A:5-24,55-66,83-89 1jos d1josa_ A:7-28,74-87,92-98 2r1c d2r1ca1 A:5-24,65-78,83-89 2dyj d2dyjb1 B:4-24,65-78,83-90 2dyj d2dyja1 A:4-24,65-78,83-90 1kkg d1kkga_ A:7-28,75-88,94-102 1kkg d1kkga_ A:7-28,61-76,94-102 2e7g d2e7ga1 A:86-111,145-160,177-182 240. d.52.9 Cation efflux protein cytoplasmic domain-like Alpha-lytic protease prodomain-like core: alpha-beta(2)-(alpha)-beta; 2 layers: alpha/beta 3byp d3bypa1 A:8-24,55-75,76-86 3byp d3bypb1 B:8-24,55-75,76-86 3byr d3byra1 A:8-24,55-75,76-86 245. d.58.47 Hypothetical protein VC0424 Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1nxi d1nxia_ A:49-64,93-112,113-121 256. d.43.2 Band 7/SPFH domain beta(2)-alpha(3)-beta ! EF-Ts domain-like beta(2)-alpha(n)-beta; 2 layers a/b; antiparallel sheet: 123 1win d1wina_ A:60-84,91-111,111-124 257. c.1.22 UROD/MetE-like TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 1u1j d1u1ja2 A:560-569,575-598,600-607 1u1h d1u1ha2 A:560-569,575-598,600-607 1u1u d1u1ua2 A:560-569,575-598,600-607 1u22 d1u22a2 A:560-569,575-598,600-607 1u1h d1u1ha2 A:560-569,616-636,642-649 1jpi d1jpia_ A:157-168,225-252,256-263 1jph d1jpha_ A:157-168,225-252,256-263 1uro d1uroa_ A:157-168,225-252,256-263 1jpk d1jpka_ A:157-168,225-252,256-263 1r3r d1r3ra_ A:157-168,225-252,256-263 1r3y d1r3ya_ A:157-168,225-252,256-263 1r3s d1r3sa_ A:157-168,225-252,256-263 1r3w d1r3wa_ A:157-168,225-252,256-263 1r3v d1r3va_ A:157-168,225-252,256-263 1r3t d1r3ta_ A:157-168,225-252,256-263 1r3q d1r3qa_ A:157-168,225-252,256-263 258. d.259.1 Hypothetical protein HI1480 Hypothetical protein HI1480 beta-alpha(4)-beta-alpha-beta; segregated alpha-helical and beta-sheet subdomains; dimeric beta-sheet barrel: n=6, S=10 1mw5 d1mw5a_ A:3-13,130-141,143-153 1mw5 d1mw5b_ B:3-13,130-141,143-153 266. d.58.59 Rnp2-like contains extra C-terminal helix Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2czv d2czvd1 D:30-47,76-88,95-104 2av5 d2av5a1 A:30-47,74-87,92-104 2av5 d2av5c1 C:30-47,74-87,92-104 2av5 d2av5e1 E:30-47,74-87,92-104 2av5 d2av5d1 D:30-47,74-87,92-104 2av5 d2av5b1 B:30-47,74-87,92-104 267. d.161.1 ADC synthase the active site is formed by additional structures inserted into the core structure ! ADC synthase duplication: contains four repeats of alpha-beta(2)-beta motif arranged in a 4 layer core structure: alpha/beta/beta/alpha; orthogonally packed beta-sheets 2fn1 d2fn1b1 B:171-189,353-366,398-409 2fn0 d2fn0b1 B:171-189,353-366,398-409 2g5f d2g5fc1 C:186-201,366-376,412-423 2g5f d2g5fb1 B:186-201,366-378,412-423 2fn0 d2fn0a1 A:171-189,353-366,398-409 2g5f d2g5fd1 D:186-201,366-376,412-423 2i6y d2i6ya1 A:186-201,366-378,412-423 2g5f d2g5fa1 A:186-201,366-378,412-423 3bzm d3bzma1 A:168-186,349-361,394-405 1i7q d1i7qa_ A:241-259,430-443,476-487 2eua d2euaa1 A:168-186,349-361,394-405 1i7q d1i7qc_ C:241-259,430-443,476-487 3bzn d3bzna1 A:168-186,349-361,394-405 1i1q d1i1qa_ A:241-259,430-443,476-487 2eua d2euab1 B:168-187,349-361,394-405 270. e.10.1 Prokaryotic type I DNA topoisomerase duplication: the protein chain passing through the domains 2-4 makes two structural repeats ! The active site is formed by the toprim and "winged helix" domains (domains 1 and 4); these two domains are also found in the type II topoisomerase (DNA gyrase A) and in the alpha subunit of topoisomerase IV ! Prokaryotic type I DNA topoisomerase 4 domains: (1) Toprim alpha/beta; (2&4) "winged helix"-like; (3) barrel: n=6, S=8 1i7d d1i7da_ A:196-216,492-503,540-545 1ecl d1ecla_ A:194-214,478-490,509-514 1d6m d1d6ma_ A:196-216,492-503,540-545 1cy0 d1cy0a_ A:194-214,478-490,509-514 1mw9 d1mw9x_ X:194-214,478-490,509-514 1cy2 d1cy2a_ A:194-214,478-490,509-514 1mw8 d1mw8x_ X:194-214,478-490,509-514 1cy1 d1cy1a_ A:194-214,478-490,509-514 1cy4 d1cy4a_ A:194-214,478-490,509-514 1cy7 d1cy7a_ A:194-214,478-490,509-514 1cy8 d1cy8a_ A:194-214,478-490,509-514 272. e.66.1 Api92-like Api92-like 2 domains; d1: [alpha+beta with similarity to ferredoxin-like fold]; d2: [6 helices, bundle, one buried central helix], inserted into d1 2ijr d2ijra1 A:14-27,234-246,247-257 276. d.359.1 BH3703-like BH3703-like alpha-beta(3)-alpha-beta(2)-alpha(2); antiparallel beta-sheet, order:32145; duplication: two alpha-beta(2) structural repeats are arranged with pseudo twofold symmetry 2ia1 d2ia1a1 A:0-21,66-93,97-105 2ia1 d2ia1b1 B:0-21,66-93,97-105 277. a.8.3 Families 57/38 glycoside transferase middle domain immunoglobulin/albumin-binding domain-like 3 helices; bundle, closed, left-handed twist; up-and-down; mirror topology to the spectrin-like fold 3bui d3buia1 A:422-447,453-470,956-966 3bup d3bupa1 A:422-447,453-470,956-966 1tqu d1tqua1 A:422-447,453-470,956-966 3d4y d3d4ya1 A:422-447,453-470,956-966 3czn d3czna1 A:422-447,453-470,956-966 3d52 d3d52a1 A:422-447,453-470,956-966 3d51 d3d51a1 A:422-447,453-470,956-966 2f7r d2f7ra1 A:422-447,453-470,956-966 3d4z d3d4za1 A:422-447,453-470,956-966 3czs d3czsa1 A:422-447,453-470,956-966 3bvw d3bvwa1 A:422-447,453-470,956-966 3buq d3buqa1 A:422-447,453-470,956-966 3bub d3buba1 A:422-447,453-470,956-966 2f1a d2f1aa1 A:422-447,453-470,956-966 3bvu d3bvua1 A:422-447,453-470,956-966 3bvt d3bvta1 A:422-447,453-470,956-966 1hty d1htya1 A:422-447,453-470,956-966 1hxk d1hxka1 A:422-447,453-470,956-966 1r34 d1r34a1 A:422-447,453-470,956-966 3bvx d3bvxa1 A:422-447,453-470,956-966 2fyv d2fyva1 A:422-447,453-470,956-966 2f7p d2f7pa1 A:422-447,453-470,956-966 2f7q d2f7qa1 A:422-447,453-470,956-966 1tqt d1tqta1 A:422-447,453-470,956-966 3ddg d3ddga1 A:422-447,453-470,956-966 3bud d3buda1 A:422-447,453-470,956-966 1qx1 d1qx1a1 A:422-447,453-470,956-966 1r33 d1r33a1 A:422-447,453-470,956-966 2alw d2alwa1 A:422-447,453-470,956-966 3cv5 d3cv5a1 A:422-447,453-470,956-966 3ddf d3ddfa1 A:422-447,453-470,956-966 2f18 d2f18a1 A:422-447,453-470,956-966 1tqw d1tqwa1 A:422-447,453-470,956-966 3blb d3blba1 A:422-447,453-470,956-966 2ow6 d2ow6a1 A:422-447,453-470,956-966 1tqv d1tqva1 A:422-447,453-470,956-966 1tqs d1tqsa1 A:422-447,453-470,956-966 1qwn d1qwna1 A:422-447,453-470,956-966 1qwu d1qwua1 A:422-447,453-470,956-966 3d50 d3d50a1 A:422-447,453-470,956-966 1hww d1hwwa1 A:422-447,453-470,956-966 2f7o d2f7oa1 A:422-447,453-470,956-966 2ow7 d2ow7a1 A:422-447,453-470,956-966 3bvv d3bvva1 A:422-447,453-470,956-966 1ps3 d1ps3a1 A:422-447,453-470,956-966 2f1b d2f1ba1 A:422-447,453-470,956-966 282. d.58.20 NAD-binding domain of HMG-CoA reductase Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1dq8 d1dq8b1 B:598-612,656-676,678-684 1dq8 d1dq8a1 A:598-612,656-676,678-684 1hw9 d1hw9d1 D:598-612,656-676,678-684 1dq8 d1dq8d1 D:598-612,656-676,678-684 1dq9 d1dq9b1 B:598-612,656-676,678-684 1dq9 d1dq9a1 A:598-612,656-676,678-684 1dq9 d1dq9c1 C:598-612,656-676,678-684 1dqa d1dqac1 C:598-612,656-676,678-684 1dq9 d1dq9d1 D:598-612,656-676,678-684 1hw8 d1hw8d1 D:598-612,656-676,678-684 1dqa d1dqab1 B:598-612,656-676,678-684 1dqa d1dqad1 D:598-612,656-676,678-684 1hwl d1hwld1 D:598-612,656-676,678-684 1hwi d1hwic1 C:598-612,656-676,678-684 1hw9 d1hw9a1 A:598-612,656-676,678-684 1hw9 d1hw9c1 C:598-612,656-676,678-684 1hwk d1hwkd1 D:598-612,656-676,678-684 1hw9 d1hw9b1 B:598-612,656-676,678-684 1dq8 d1dq8c1 C:598-612,656-676,678-684 1hwi d1hwid1 D:598-612,656-676,678-684 1hwk d1hwkc1 C:598-612,656-676,678-684 1hwj d1hwjc1 C:598-612,656-676,678-684 1hwl d1hwlc1 C:598-612,656-676,678-684 1hwj d1hwjd1 D:598-612,656-676,678-684 1hwi d1hwib1 B:598-612,656-676,678-684 1hwl d1hwla1 A:598-612,656-676,678-684 1hwl d1hwlb1 B:598-612,656-676,678-684 1hw8 d1hw8c1 C:598-612,656-676,678-684 1dqa d1dqaa1 A:598-612,656-676,678-684 1hwk d1hwka1 A:598-612,656-676,678-684 1hw8 d1hw8a1 A:598-612,656-676,678-684 1hwk d1hwkb1 B:598-612,656-676,678-684 1hwj d1hwja1 A:598-612,656-676,678-684 1hw8 d1hw8b1 B:598-612,656-676,678-684 1hwi d1hwia1 A:598-612,656-676,678-684 1hwj d1hwjb1 B:598-612,656-676,678-684 285. c.1.33 EAL domain-like variant of the beta/alpha-barrel fold with strand 1 being antiparallel to the rest ! TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 2bas d2basb1 B:46-53,57-80,84-89 2bas d2basa1 A:46-53,57-80,84-89 293. e.2.1 Replication terminator protein (Tus) Replication terminator protein (Tus) contains a cluster of helices and a beta-sandwich 1ecr d1ecra_ A:5-32,103-133,256-264 2i06 d2i06a1 A:5-32,103-133,259-265 2ewj d2ewja1 A:5-32,103-133,256-265 2i05 d2i05a1 A:5-32,103-133,256-265 295. d.137.1 Monooxygenase (hydroxylase) regulatory protein duplication: consists of two beta-alpha-(beta)-beta(2) motifs; some topological similarity to the ferredoxin-like fold ! Monooxygenase (hydroxylase) regulatory protein corner-like structure formed by two sheets and filled in with 2-3 helices 2bf5 d2bf5a1 A:19-35,59-68,92-98 2bf2 d2bf2b1 B:19-35,59-68,92-98 2mob d2moba_ A:87-96,98-109,113-119 2bf2 d2bf2a1 A:19-35,59-68,92-98 2bf5 d2bf5b1 B:20-35,59-68,92-98 1ckv d1ckva_ A:45-64,88-97,121-127 1g11 d1g11a_ A:60-69,72-80,85-91 296. d.67.1 ThrRS/AlaRS common domain putative editing domain found in the N-terminal part of ThrRS, the C-terminal of AlaRS, and as a stand-alone protein; probable circular permutation of LuxS ( RRF/tRNA synthetase additional domain-like core: alpha-beta(2)-alpha-beta(2); 2 layers: alpha/beta 1nyr d1nyrb3 B:66-90,115-133,193-203 1v4p d1v4pc_ C:3-24,51-69,128-140 1wxo d1wxoc1 C:3-24,51-69,128-140 1wxo d1wxob1 B:3-24,51-69,128-140 1v4p d1v4pb_ B:3-24,51-69,129-140 1wnu d1wnub1 B:3-24,51-69,129-140 1wnu d1wnua1 A:3-24,51-69,129-140 1wxo d1wxoa1 A:3-24,51-69,129-140 1v7o d1v7oa_ A:3-24,51-69,129-140 1v7o d1v7ob_ B:3-24,51-69,129-140 1v4p d1v4pa_ A:3-24,51-69,129-140 1nyr d1nyra3 A:66-90,115-133,194-205 2e1b d2e1ba2 A:88-114,139-158,195-205 1qf6 d1qf6a3 A:64-88,113-131,195-206 1tje d1tjea2 A:64-88,113-131,195-206 1tke d1tkea2 A:64-88,113-131,195-206 1nyq d1nyqb3 B:66-88,115-133,193-204 1tkg d1tkga2 A:64-88,113-131,195-206 1tky d1tkya2 A:64-88,113-131,195-206 1nyq d1nyqa3 A:66-89,115-133,194-204 306. a.118.4 Lipovitellin-phosvitin complex, superhelical domain alpha-alpha superhelix multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix 1lsh d1lsha1 A:576-593,613-620,623-635 1lsh d1lsha1 A:543-558,595-610,623-635 1lsh d1lsha1 A:301-318,322-340,814-837 308. d.373.1 gpW/gp25-like Contains phage tail lysozyme gpW/gp25-like alpha(2)-beta(3); similar to one structural repeat of the Creatinase/aminopeptidase family and the C-terminal subdomain of PanC 2ia7 d2ia7a1 A:28-44,67-87,117-129 2ia7 d2ia7a1 A:28-44,67-87,88-98 309. d.338.1 Oxysterol-binding protein-like Oxysterol-binding protein-like core: large meander beta-sheet of 12 strands wrapped around the N-terminal (distorted) alpha-hairpin; some similarity to transmembrane beta-barrel proteins 1zi7 d1zi7b1 B:49-60,76-98,175-190 1zi7 d1zi7c1 C:49-60,76-99,175-190 1zi7 d1zi7a1 A:49-60,76-99,176-190 1zhz d1zhza1 A:49-60,76-105,175-190 1zht d1zhta1 A:49-60,76-105,175-190 1zhy d1zhya1 A:49-60,76-105,175-190 1zhx d1zhxa1 A:49-60,76-105,175-190 1zhw d1zhwa1 A:49-60,76-105,175-190 310. a.102.2 Seven-hairpin glycosidases alpha/alpha toroid multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies 2ri8 d2ri8b1 B:2347-2369,2388-2396,2397-2401 2ri9 d2ri9b1 B:2347-2369,2388-2396,2397-2401 1kre d1kreb_ B:347-369,388-396,397-401 1kkt d1kktb_ B:347-369,388-396,397-401 1krf d1krfb_ B:347-369,388-396,397-401 1kkt d1kkta_ A:347-369,388-396,397-401 1krf d1krfa_ A:347-369,388-396,397-401 1kre d1krea_ A:347-369,388-396,397-401 2ri8 d2ri8a1 A:1347-1369,1388-1396,1397-1401 2ri9 d2ri9a1 A:1347-1369,1388-1396,1397-1401 1hcu d1hcud_ D:325-347,372-380,381-385 1hcu d1hcua_ A:325-346,372-380,381-385 1hcu d1hcuc_ C:325-346,372-380,381-385 1hcu d1hcub_ B:325-346,372-380,381-385 315. d.252.1 CheC-like CheC-like duplication: tandem repeat of two intertwined alpha-beta-(X)-beta(2) motifs 1xko d1xkoa_ A:2-22,82-105,110-122 2f9z d2f9zb1 B:4-31,103-130,165-174 2f9z d2f9za1 A:4-31,103-130,163-175 1xkr d1xkra_ A:4-31,103-130,163-175 331. a.250.1 IpaD-like IpaD-like 6 helices; bundle, up-and-down; can be divided into two four-helical bundles sharing two helices (3 and 6), which are twice longer than the rest 2jaa d2jaab1 B:148-178,191-210,242-249 2j0n d2j0na1 A:146-179,191-210,242-249 2j0n d2j0nb1 B:133-179,191-210,242-249 2jaa d2jaaa1 A:130-177,192-210,242-249 2j0o d2j0oa1 A:130-178,192-209,242-249 2j0o d2j0ob1 B:130-178,192-209,242-249 335. d.58.50 Hypothetical protein TT1725 Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1j27 d1j27a_ A:18-38,63-82,84-98 336. d.363.1 NMB0513-like NMB0513-like alpha(3)-beta(2)-alpha-beta(2); some similarity to the "winged helix" DNA-binding domain fold 2o5h d2o5ha1 A:16-28,30-43,64-70 339. e.57.1 Vacuolar ATP synthase subunit C Vacuolar ATP synthase subunit C 2 alpha+beta (sub)domains [each has a ferredoxin-like fold; scop_cf 54861], connected with 3-helical bundle; duplication: two repeats of beta-alpha-beta-[alpha coiled-coil]-beta-alpha-beta motif 1u7l d1u7la_ A:57-90,263-320,386-392 340. d.58.60 Bacterial polysaccharide co-polymerase-like Decorated common fold with extra helical regions, which facilitate oligomerization Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 3b8p d3b8pb1 B:87-113,140-186,276-280 3b8p d3b8pc1 C:87-113,140-195,276-280 3b8p d3b8pd1 D:87-113,140-196,276-280 3b8o d3b8oa1 A:96-111,168-230,305-312 3b8o d3b8oe1 E:96-111,168-230,305-313 3b8o d3b8od1 D:96-111,168-230,305-312 3b8o d3b8og1 G:96-111,168-230,305-312 3b8o d3b8ob1 B:96-111,168-230,305-312 3b8o d3b8oh1 H:96-111,168-230,305-312 3b8p d3b8pe1 E:87-113,140-202,276-280 3b8o d3b8oc1 C:96-111,168-230,305-312 3b8o d3b8of1 F:96-111,168-230,305-312 3b8p d3b8pa1 A:87-113,140-203,276-280 3b8m d3b8ma1 A:99-114,180-251,320-324 3b8n d3b8nf1 F:99-114,180-251,320-324 3b8n d3b8nc1 C:99-114,180-251,320-324 3b8n d3b8nb1 B:99-114,180-251,320-324 3b8m d3b8mc1 C:99-114,180-251,320-324 3b8n d3b8nd1 D:99-114,180-251,320-324 3b8n d3b8ni1 I:99-114,180-251,320-324 3b8n d3b8nh1 H:99-114,180-251,320-324 3b8n d3b8ne1 E:99-114,180-251,320-324 3b8n d3b8ng1 G:99-114,180-251,320-324 3b8n d3b8na1 A:99-114,180-251,320-324 3b8m d3b8mb1 B:99-114,180-251,320-324 345. f.5.1 Outer membrane efflux proteins (OEP) Outer membrane efflux proteins (OEP) subunit fold contains tandem repeat of alpha-beta hairpin-alpha(2) motif ! trimeric fold contains barrel (n=12, S=18) formed by beta-hairpins, two from each subunit, and a bundle of helices with a channel running through it 1ek9 d1ek9b_ B:77-147,150-187,419-425 1ek9 d1ek9a_ A:77-147,150-187,419-425 1ek9 d1ek9c_ C:77-147,150-187,419-425 1tqq d1tqqb_ B:77-147,150-187,419-425 1tqq d1tqqa_ A:77-147,150-187,419-425 1tqq d1tqqc_ C:77-147,150-187,419-425