List of the counted superfamily hits for pattern ID: 127 (enumeration index: query117) of S4

List of the counted superfamily hits for pattern ID: 127 (enumeration index: query117) of S4

SCOP superfamily ID superfamiily description corresponding fold description
c.60.1Phosphoglycerate mutase-like Phosphoglycerate mutase-like core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 324156; strand 5 is antiparallel to the rest
c.133.1RbsD-like RbsD-like 3 layers: a/b/a; mixed beta-sheet of 6 strands, order 251634; strand 6 is antiparallel to the rest
e.25.1Sec1/munc18-like (SM) proteins Sec1/munc18-like (SM) proteins 3 domains: (1 and 2) alpha+beta; (3) mostly alpha, inserted in domain 2
d.320.1YojJ-like YojJ-like alpha-beta-X-beta-alpha-beta(2)-alpha-beta(3); 3 layers: a/b/a; 7-stranded mixed beta-sheet, order 2431567; strands 1 and 3 are parallel to each other
d.154.1DmpA/ArgJ-like convergent similarity to the Ntn amidohydrolases ! DmpA/ArgJ-like duplication of beta(3)-alpha-beta-alpha motif; 4 layers: alpha/beta/beta/alpha
c.56.6LigB-like circular permutation of the common fold, most similar to the PNP fold ! Phosphorylase/hydrolase-like core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops
e.26.1Prismane protein-like Prismane protein-like 3 domains: (1) spectrin repeat-like 3-helical bundle; (2 and 3) alpha/beta: Rossmann-fold topology