1. d.58.8 Viral DNA-binding domain Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1by9 d1by9a_ A:283-291,329-336,337-349,354-362 1jjh d1jjhc_ C:326-333,374-380,382-394,399-406 2q79 d2q79a1 A:283-291,329-336,337-349,354-362 1zzf d1zzfa1 A:1-9,47-53,55-67,72-80 2bop d2bopa_ A:326-333,374-380,382-394,399-406 1f9f d1f9fc_ C:285-294,331-337,339-350,356-365 1jj4 d1jj4a_ A:286-295,330-337,339-350,356-364 1jj4 d1jj4b_ B:286-295,330-337,339-350,356-364 2aye d2ayed1 D:283-291,329-335,337-348,354-362 2ayb d2ayba1 A:282-291,329-335,337-349,354-363 2aye d2ayef1 F:282-291,329-335,337-348,354-363 2ayb d2aybb1 B:282-291,329-335,337-349,354-363 2aye d2ayec1 C:282-291,329-335,337-348,354-363 2aye d2ayeb1 B:282-291,329-335,337-349,354-363 1r8h d1r8hc_ C:282-291,329-335,337-348,354-363 1r8h d1r8hd_ D:282-291,329-335,337-348,354-363 1r8h d1r8he_ E:282-291,329-335,337-348,354-363 1r8h d1r8hf_ F:282-291,329-335,337-348,354-363 1r8h d1r8ha_ A:282-291,329-335,337-348,354-363 2aye d2ayee1 E:282-291,329-335,337-348,354-363 1r8h d1r8hb_ B:282-291,329-335,337-348,354-363 1f9f d1f9fa_ A:285-295,330-337,339-350,356-365 1f9f d1f9fb_ B:285-295,330-337,339-350,356-365 2ayg d2ayga1 A:282-291,329-335,337-348,354-362 1f9f d1f9fd_ D:285-295,330-337,339-351,356-365 2aye d2ayea1 A:282-291,329-335,337-348,354-363 2ayg d2aygb1 B:282-291,329-335,337-348,354-363 1zzf d1zzfb1 B:1-9,47-53,55-67,72-81 1a7g d1a7ge_ E:291-301,336-344,346-358,363-372 1r8p d1r8pa_ A:1-9,47-54,55-67,72-81 1r8p d1r8pb_ B:1-9,47-54,55-67,72-81 1dhm d1dhma_ A:3-12,47-55,57-69,74-82 1dhm d1dhmb_ B:3-12,47-55,57-69,74-82 1jjh d1jjhb_ B:325-333,374-380,382-393,399-410 1jjh d1jjha_ A:326-333,374-380,382-394,399-410 1b3t d1b3tb_ B:504-511,559-567,568-586,593-602 1vhi d1vhib_ B:504-511,559-567,568-586,593-602 1dbd d1dbdb_ B:16-24,63-71,72-84,89-99 1vhi d1vhia_ A:504-511,559-567,568-587,593-602 1b3t d1b3ta_ A:504-511,559-567,568-587,593-602 1dbd d1dbda_ A:16-24,63-71,72-79,89-99 2. d.89.1 Origin of replication-binding domain, RBD-like Origin of replication-binding domain, RBD-like alpha-beta-alpha-beta(2)-alpha-beta-alpha-beta; 3 layers: a/b/a; antiparallel sheet 41325 2tbd d2tbda_ A:29-36,63-71,76-92,93-99 1m55 d1m55a_ A:76-85,86-96,146-157,161-168 1m55 d1m55b_ B:76-85,86-96,146-157,161-168 1tbd d1tbda_ A:29-36,63-72,76-92,93-99 1uut d1uuta_ A:76-85,86-96,146-157,161-168 1uut d1uutb_ B:76-85,86-96,146-157,161-168 1z1d d1z1db1 B:29-36,63-71,76-92,93-99 1rz9 d1rz9e_ E:76-85,86-96,146-158,161-168 2ntc d2ntcb1 B:157-164,191-199,204-216,221-227 1rz9 d1rz9d_ D:76-85,86-96,146-158,161-168 2if9 d2if9b1 B:157-164,191-199,204-216,221-227 1rz9 d1rz9a_ A:76-85,86-96,146-158,161-168 1rz9 d1rz9c_ C:76-85,86-96,146-158,161-168 1rz9 d1rz9b_ B:76-85,86-96,146-158,161-168 2itl d2itla1 A:157-164,191-199,204-217,221-227 2tbd d2tbda_ A:53-62,63-71,100-111,113-119 2itl d2itlb1 B:157-164,191-199,204-217,221-227 2ipr d2iprb1 B:157-164,191-199,204-216,221-227 2ipr d2ipra1 A:157-164,191-199,204-216,221-227 2ntc d2ntca1 A:157-164,191-199,204-217,221-227 2if9 d2if9a1 A:157-164,191-199,204-216,221-227 2fuf d2fufa1 A:157-164,191-199,204-216,221-227 2itl d2itlb1 B:181-190,191-199,228-239,241-247 2itj d2itjb1 B:157-164,191-199,204-214,221-227 2itl d2itla1 A:181-190,191-199,228-239,241-247 2ntc d2ntcb1 B:181-190,191-199,228-239,241-247 1tbd d1tbda_ A:52-62,63-72,100-111,113-120 2ntc d2ntca1 A:181-190,191-199,228-239,241-247 2ipr d2ipra1 A:181-190,191-199,228-239,241-247 2ipr d2iprb1 B:181-190,191-199,228-239,241-247 2fuf d2fufa1 A:181-190,191-199,228-239,241-247 2if9 d2if9b1 B:181-190,191-199,228-239,241-247 2if9 d2if9a1 A:181-190,191-199,228-239,241-247 2itj d2itjb1 B:181-190,191-199,228-239,241-247 2itj d2itja1 A:157-164,191-200,204-217,221-227 1r9w d1r9wa_ A:241-249,279-289,293-306,311-316 2itj d2itja1 A:180-190,191-200,228-239,241-247 1ksx d1ksxa_ A:190-198,227-238,242-255,260-267 1ksx d1ksxe_ E:190-198,227-238,242-255,260-267 1ksx d1ksxi_ I:190-198,227-238,242-255,260-267 1ksx d1ksxm_ M:190-198,227-238,242-255,260-267 1z1d d1z1db1 B:53-62,63-71,100-110,113-120 1ksy d1ksyc_ C:190-198,227-238,242-255,260-267 1ksy d1ksya_ A:190-198,227-238,242-255,260-267 1ksy d1ksyb_ B:190-198,227-238,242-255,260-267 1ksx d1ksxf_ F:190-198,227-238,242-255,260-265 1ksx d1ksxn_ N:190-198,227-238,242-255,260-265 1ksx d1ksxb_ B:190-198,227-238,242-255,260-265 1ksx d1ksxj_ J:190-198,227-238,242-255,260-265 1f08 d1f08b_ B:190-198,227-238,242-255,260-265 1f08 d1f08a_ A:190-198,227-238,242-255,260-265 1l5i d1l5ia_ A:39-52,54-66,96-107,110-115 1uut d1uuta_ A:3-11,86-96,100-121,130-134 1uut d1uutb_ B:2-12,86-96,100-121,130-134 1l2m d1l2ma_ A:39-52,54-66,97-107,110-115 1rz9 d1rz9c_ C:2-11,86-96,100-121,130-134 1rz9 d1rz9b_ B:2-11,86-96,100-121,130-134 1m55 d1m55a_ A:2-11,86-96,100-121,130-134 1rz9 d1rz9d_ D:2-11,86-96,100-121,130-134 1m55 d1m55b_ B:2-11,86-96,100-121,130-134 1rz9 d1rz9e_ E:2-11,86-96,100-121,130-134 1rz9 d1rz9a_ A:2-11,86-96,100-121,130-134 1r9w d1r9wa_ A:265-276,279-289,321-335,337-341 1ksy d1ksyc_ C:214-226,227-238,270-284,286-290 1ksx d1ksxi_ I:214-226,227-238,270-284,286-290 1ksx d1ksxa_ A:214-226,227-238,270-284,286-290 1ksx d1ksxe_ E:214-226,227-238,270-284,286-290 1ksx d1ksxm_ M:214-226,227-238,270-284,286-290 1ksy d1ksya_ A:214-226,227-238,270-284,286-290 1ksy d1ksyb_ B:214-226,227-238,270-284,286-290 1ksx d1ksxj_ J:214-226,227-238,270-284,286-290 1ksx d1ksxb_ B:214-226,227-238,270-284,286-290 1ksx d1ksxf_ F:214-226,227-238,270-284,286-290 1ksx d1ksxn_ N:214-226,227-238,270-284,286-290 1f08 d1f08a_ A:214-226,227-238,270-284,286-290 1f08 d1f08b_ B:214-226,227-238,270-284,286-290 4. c.90.1 Tetrapyrrole methylase Tetrapyrrole methylase consists of two non-similar domains ! Domain 1 has parallel sheet of 5 strands, order 32415 ! Domain 2 has mixed sheet of 5 strands, order 12534; strands 4 & 5 are antiparallel to the rest 1pjs d1pjsa2 A:403-410,416-423,425-434,436-442 1pjq d1pjqb2 B:403-410,416-423,425-434,436-442 2cbf d2cbfa_ A:205-212,218-225,224-236,240-246 1pjq d1pjqa2 A:403-410,416-423,425-434,436-442 1s4d d1s4dg_ G:203-212,218-226,225-236,240-246 1s4d d1s4di_ I:203-212,218-226,225-236,240-246 1s4d d1s4dk_ K:203-212,218-226,225-236,240-246 1pjt d1pjtb2 B:403-410,416-423,425-434,436-442 1pjs d1pjsb2 B:403-410,416-423,425-434,436-442 1s4d d1s4db_ B:205-212,218-225,224-236,240-246 1s4d d1s4de_ E:203-212,218-226,225-236,240-246 1pjt d1pjta2 A:403-410,416-423,425-434,436-442 1s4d d1s4dm_ M:203-212,218-226,225-236,240-246 1cbf d1cbfa_ A:205-212,218-225,224-236,240-246 1s4d d1s4df_ F:205-212,218-225,224-236,240-246 1s4d d1s4dh_ H:205-212,218-225,224-236,240-246 1s4d d1s4dd_ D:205-212,218-225,224-236,240-246 1s4d d1s4da_ A:205-212,218-225,224-236,240-246 1vhv d1vhvb_ B:186-193,199-206,205-213,218-226 1s4d d1s4dj_ J:205-212,218-225,224-236,240-246 1vhv d1vhva_ A:186-193,199-206,205-213,218-226 1s4d d1s4dl_ L:205-212,218-225,227-236,240-246 1vce d1vcea1 A:202-208,214-220,220-227,233-241 2dek d2deka1 A:202-208,214-220,220-227,233-241 1wng d1wnga1 A:202-208,214-220,220-227,233-241 1wng d1wngb1 B:202-208,214-220,220-227,233-241 2dek d2dekb1 B:202-208,214-220,220-227,233-241 1vce d1vceb1 B:202-208,214-220,220-227,233-241 1wyz d1wyzb1 B:193-200,206-213,212-220,225-234 1wyz d1wyza1 A:193-200,206-212,212-220,228-234 1wyz d1wyzd1 D:193-200,206-212,212-220,227-234 1wyz d1wyzc1 C:193-200,206-213,212-220,228-234 1va0 d1va0b1 B:182-188,194-200,200-207,214-220 1v9a d1v9aa1 A:182-188,194-200,200-207,214-220 1v9a d1v9ab1 B:182-188,194-200,200-207,214-220 1va0 d1va0a1 A:182-188,194-200,200-207,214-220 5. d.194.1 CNF1/YfiH-like putative cysteine hydrolases CNF1/YfiH-like putative cysteine hydrolases 4 layers: alpha/beta/beta/alpha; mixed beta sheets 1rw0 d1rw0b_ B:107-115,119-126,133-143,148-155 1xaf d1xafb_ B:107-115,119-126,133-143,148-155 1xaf d1xafa_ A:107-115,119-126,133-143,148-155 1rv9 d1rv9a_ A:118-126,130-137,144-154,159-166 1u05 d1u05a_ A:107-115,119-126,133-143,148-154 1u05 d1u05b_ B:107-115,119-126,133-143,148-154 1rw0 d1rw0a_ A:107-115,119-126,133-143,148-154 1xfj d1xfja_ A:114-123,124-133,140-153,159-164 1t8h d1t8ha_ A:125-134,135-144,151-165,171-176 1hzg d1hzga_ A:866-874,875-885,920-932,932-942 1hq0 d1hq0a_ A:866-874,875-885,920-932,932-942 2f9z d2f9zc1 C:26-36,37-46,60-76,82-92 2f9z d2f9zd1 D:26-36,37-47,60-76,82-92 1hzg d1hzga_ A:866-874,875-885,890-909,932-942 1hq0 d1hq0a_ A:866-874,875-885,890-909,932-942 6. d.58.18 ACT-like regulatory domain linked to a wide range of metabolic enzymes ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1yba d1ybaa3 A:337-346,375-384,386-400,402-410 1ygy d1ygya3 A:454-463,495-503,507-519,518-528 1psd d1psda3 A:337-346,375-384,386-400,402-410 2p9e d2p9ea3 A:337-346,375-384,386-400,402-410 2p9e d2p9eb3 B:337-346,375-384,386-400,402-410 1sc6 d1sc6b3 B:337-346,375-384,386-400,402-410 1yba d1ybab3 B:337-346,375-384,386-400,402-410 1sc6 d1sc6d3 D:337-346,375-384,386-400,402-410 2cdq d2cdqb2 B:340-348,380-387,397-412,412-418 1yba d1ybac3 C:337-346,375-384,386-400,402-410 2p9e d2p9ec3 C:337-346,375-384,386-400,402-410 2cdq d2cdqa2 A:340-348,380-387,397-412,412-418 1sc6 d1sc6a3 A:337-346,375-385,386-400,402-410 1yba d1ybad3 D:337-346,375-384,386-400,402-410 2pa3 d2pa3a3 A:337-346,375-384,386-400,402-410 1sc6 d1sc6c3 C:337-346,375-384,386-400,402-410 2p9c d2p9cb3 B:337-346,375-384,386-400,402-410 2p9e d2p9ed3 D:337-346,375-384,386-400,402-410 2p9g d2p9ga3 A:338-346,375-384,386-400,402-410 1ygy d1ygyb3 B:454-463,494-504,507-519,519-528 2p9g d2p9gb3 B:338-346,375-384,386-400,402-410 2p9c d2p9ca3 A:337-346,375-385,386-400,402-410 2j0x d2j0xa2 A:306-315,347-354,367-378,378-385 2j0x d2j0xb2 B:307-315,347-354,367-378,378-384 1y7p d1y7pa2 A:2-10,46-54,57-69,70-77 2qmw d2qmwb2 B:184-193,229-238,240-254,254-264 2bj1 d2bj1a2 A:53-64,95-106,106-120,122-132 2pc6 d2pc6a2 A:1-11,42-52,53-68,69-77 2bj3 d2bj3a2 A:53-64,95-106,106-121,122-133 2f1f d2f1fa1 A:1-11,42-52,53-68,69-76 2pc6 d2pc6d2 D:1-11,42-52,53-68,71-77 2j0w d2j0wa2 A:307-315,347-355,367-379,378-384 1tdj d1tdja2 A:337-346,376-385,387-403,403-408 2pc6 d2pc6b2 B:1-11,42-52,53-68,69-76 2qmw d2qmwa2 A:184-193,228-238,240-254,254-263 2pc6 d2pc6c2 C:1-10,43-52,53-68,69-76 2bj8 d2bj8a2 A:53-64,95-106,106-120,123-132 1u8s d1u8sa1 A:4-15,44-55,55-74,75-82 2bj3 d2bj3d2 D:53-64,95-106,106-120,122-133 2bj1 d2bj1b2 B:53-64,95-106,106-120,122-132 2hza d2hzab2 B:51-62,93-104,104-118,120-131 2bj7 d2bj7a2 A:53-64,95-106,106-120,123-132 1u8s d1u8sb1 B:4-15,44-55,55-74,75-82 3ced d3cedb1 B:262-274,303-315,317-332,333-341 3bku d3bkud1 D:51-61,93-104,104-118,121-130 3ced d3cedc1 C:262-274,303-315,317-332,333-341 2bj3 d2bj3b2 B:53-64,95-106,106-120,122-132 3ced d3ceda1 A:262-274,303-315,317-332,333-341 2nzc d2nzcb1 B:3-14,44-56,56-70,72-80 2hmf d2hmfa3 A:317-328,358-367,367-382,394-402 1psd d1psdb3 B:338-346,375-384,386-400,402-410 2hzv d2hzvf2 F:51-62,93-104,104-118,120-131 2hmf d2hmfc3 C:317-328,358-367,367-382,394-402 2hmf d2hmfd3 D:317-328,358-367,367-382,394-402 2hmf d2hmfb3 B:317-328,358-367,367-382,394-402 2bj8 d2bj8b2 B:53-64,95-106,106-120,123-132 2nzc d2nzcd1 D:3-14,45-56,56-71,72-80 3bkt d3bktd1 D:51-62,93-104,104-118,121-131 2bj7 d2bj7b2 B:53-64,95-106,106-120,123-132 2bj3 d2bj3c2 C:53-64,95-106,106-120,122-132 2hzv d2hzvb2 B:51-62,93-104,104-118,120-131 1q5y d1q5yd_ D:51-62,93-104,104-118,121-131 2hzv d2hzvh2 H:51-62,93-104,104-118,120-131 2nzc d2nzcc1 C:3-14,45-56,56-71,72-80 2hzv d2hzvd2 D:51-62,93-104,104-118,120-131 2nzc d2nzca1 A:3-14,45-56,56-71,72-80 1q5v d1q5va2 A:51-61,93-104,104-118,120-131 1q5v d1q5vd2 D:51-62,93-104,104-118,121-131 2bj9 d2bj9a2 A:53-64,95-106,106-120,122-132 3bku d3bkub1 B:51-62,93-104,104-119,121-131 1q5v d1q5vc2 C:51-61,93-104,104-118,121-131 1q5y d1q5ya_ A:51-62,93-104,104-118,121-131 1q5v d1q5vb2 B:51-61,93-104,104-118,120-131 3bkf d3bkfa1 A:51-61,93-104,104-119,120-131 1y7p d1y7pb2 B:1-10,44-55,57-69,70-77 1q5y d1q5yb_ B:51-62,93-104,104-119,121-131 2f1f d2f1fb1 B:1-11,42-52,53-68,69-76 1u8s d1u8sb2 B:91-101,140-150,154-170,171-180 3bkt d3bktb1 B:51-62,93-104,104-119,121-131 2qsw d2qswa1 A:268-277,309-320,321-336,337-342 2fgc d2fgca2 A:27-38,69-80,80-95,96-103 2hza d2hzaa2 A:51-61,93-104,104-118,120-131 1zpv d1zpva1 A:-1-10,40-51,55-71,72-79 2hzv d2hzve2 E:51-62,93-104,104-119,121-131 1u8s d1u8sa2 A:91-101,139-150,154-170,171-180 2hzv d2hzva2 A:51-62,93-104,104-119,121-131 3bkt d3bkta1 A:51-62,93-104,104-119,121-131 3bku d3bkuc1 C:51-62,93-103,104-119,121-131 1zpv d1zpvc1 C:-1-10,40-51,55-71,72-79 3bku d3bkua1 A:51-62,93-103,104-119,121-131 2hzv d2hzvc2 C:51-62,93-104,104-119,121-131 1zpv d1zpvb1 B:-1-10,40-51,55-71,72-79 1q5y d1q5yc_ C:51-62,93-103,104-118,121-131 2hzv d2hzvg2 G:51-62,93-104,104-119,121-131 1phz d1phza1 A:33-43,75-85,87-103,106-111 3bkt d3bktc1 C:51-62,93-103,104-118,121-131 3dhw d3dhwc2 C:266-274,306-318,319-334,334-343 3dhx d3dhxb1 B:19-32,61-73,74-89,90-100 2phm d2phma1 A:33-43,75-85,87-103,106-111 2qrr d2qrrb1 B:19-28,60-72,73-88,89-98 3dhw d3dhwg2 G:266-274,306-318,319-334,334-343 2f1f d2f1fa2 A:80-93,118-127,127-139,146-157 2qrr d2qrra1 A:19-29,60-72,73-88,89-98 1y7p d1y7pc2 C:5-10,46-52,61-69,70-76 3dhx d3dhxa1 A:19-32,61-73,74-89,90-100 3dhw d3dhwd2 D:266-275,306-318,319-334,335-343 2bj9 d2bj9b2 B:52-64,95-106,106-120,123-132 3dhw d3dhwh2 H:266-275,306-318,319-334,335-343 2fgc d2fgca1 A:109-122,146-155,155-167,170-184 2pc6 d2pc6d1 D:80-93,118-127,127-139,142-156 2f1f d2f1fb2 B:80-93,118-127,127-139,143-157 2pc6 d2pc6a1 A:80-93,118-127,127-139,142-156 2pc6 d2pc6c1 C:80-93,118-127,127-139,142-156 2pc6 d2pc6b1 B:80-93,118-127,127-139,142-156 2f06 d2f06b2 B:2-11,41-50,51-63,65-78 2f06 d2f06a2 A:2-11,41-50,51-63,65-78 7. d.58.7 RNA-binding domain, RBD Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1koo d1kooa2 A:119-126,157-164,165-176,188-194 1qm9 d1qm9a2 A:120-129,159-166,167-180,188-195 1koh d1koha2 A:119-126,157-164,165-176,188-194 1koh d1kohc2 C:116-126,157-166,165-176,188-194 1ft8 d1ft8a2 A:119-126,157-164,165-176,189-194 1koo d1kooc2 C:118-126,157-166,165-176,189-193 2j0q d2j0qd1 D:71-79,115-122,123-135,144-149 2j0q d2j0qg1 G:71-79,115-122,123-135,144-149 2evz d2evza1 A:13-20,52-60,60-74,81-86 1o0p d1o0pa_ A:376-382,430-437,438-450,459-465 1ft8 d1ft8c2 C:118-126,157-165,165-176,189-194 2jx2 d2jx2a1 A:39-46,73-81,82-96,103-108 2e29 d2e29a1 A:20-27,63-70,70-82,86-90 1wez d1weza_ A:15-22,56-62,64-75,84-91 2bz2 d2bz2a1 A:39-46,73-81,82-96,103-107 1rkj d1rkja2 A:99-107,134-143,145-159,166-173 2cq3 d2cq3a1 A:119-127,161-169,169-183,190-195 1u2f d1u2fa_ A:2-8,48-55,60-68,77-81 1no8 d1no8a_ A:105-111,146-153,154-166,172-181 1whw d1whwa_ A:38-44,80-87,88-102,106-114 1x5o d1x5oa1 A:26-32,67-74,75-89,104-109 1h2v d1h2vz_ Z:40-46,82-89,90-104,111-116 1h6k d1h6kz_ Z:40-46,82-89,90-104,111-116 2cq1 d2cq1a1 A:60-65,94-102,103-118,126-131 1x4e d1x4ea1 A:6-12,48-55,56-71,73-77 1h6k d1h6ky_ Y:40-46,82-89,90-104,111-116 2adb d2adba1 A:182-190,220-229,230-244,252-258 2cq0 d2cq0a1 A:239-245,281-287,289-303,310-315 1h6k d1h6kx_ X:40-46,82-89,90-104,111-116 2cqh d2cqha1 A:4-9,39-44,47-63,69-74 1x4d d1x4da1 A:16-22,53-60,61-76,84-90 2mst d2msta_ A:110-115,151-158,159-170,176-184 1sjr d1sjra_ A:45-53,83-92,93-105,114-121 1h2u d1h2ux_ X:40-46,82-89,90-103,108-116 3sxl d3sxlc2 C:211-217,253-260,261-273,284-289 1h2t d1h2tz_ Z:40-46,82-89,90-104,108-116 3sxl d3sxla2 A:211-217,253-260,261-273,284-289 3sxl d3sxlb2 B:211-217,253-260,261-273,284-289 1h2u d1h2uy_ Y:40-46,82-89,90-103,108-116 1n54 d1n54b_ B:40-46,82-89,90-104,108-116 1fje d1fjeb1 B:14-20,55-62,63-76,83-87 1x4h d1x4ha1 A:16-22,58-65,66-79,93-98 1n52 d1n52b_ B:40-46,82-89,90-104,108-116 1wf2 d1wf2a_ A:16-22,51-58,59-73,80-85 3sxl d3sxlc1 C:125-131,167-174,175-188,193-201 3sxl d3sxlb1 B:125-131,167-174,175-188,193-201 3sxl d3sxla1 A:125-131,167-174,175-188,193-201 2dis d2disa1 A:9-15,53-60,61-75,84-88 1cvj d1cvjd2 D:99-105,139-146,147-161,168-173 2cpf d2cpfa1 A:360-366,405-412,413-427,434-439 1x4f d1x4fa1 A:26-32,62-70,71-86,94-99 1fnx d1fnxh2 H:125-131,164-174,175-187,198-202 1wi8 d1wi8a_ A:95-102,139-145,146-159,166-171 1fxl d1fxla2 A:125-131,167-174,175-187,197-203 1uaw d1uawa_ A:21-27,61-70,72-81,90-95 2u2f d2u2fa_ A:2-8,44-50,52-64,73-79 1sjq d1sjqa_ A:17-23,52-60,61-76,84-89 2cq2 d2cq2a1 A:43-49,81-88,89-103,110-120 1why d1whya_ A:91-97,126-134,135-149,158-163 1fnx d1fnxh1 H:39-45,81-87,89-102,107-115 2cpx d2cpxa1 A:309-315,351-357,359-371,377-385 1u6b d1u6ba_ A:10-16,53-60,61-73,79-87 1g2e d1g2ea2 A:125-131,167-174,175-187,197-203 1wi6 d1wi6a1 A:67-73,102-109,110-123,128-136 1wey d1weya_ A:6-12,46-54,55-67,76-81 1jmt d1jmta_ A:44-50,110-118,119-133,141-145 1up1 d1up1a2 A:105-111,147-154,155-166,175-180 2cpi d2cpia1 A:110-115,157-163,165-179,186-190 2cpy d2cpya1 A:544-550,586-592,594-605,611-620 2cpz d2cpza1 A:401-407,443-449,451-464,469-477 2aym d2ayma1 A:9-15,46-53,54-66,74-81 2adc d2adca1 A:337-343,375-382,383-395,403-409 1b7f d1b7fb2 B:211-217,253-260,261-273,283-289 1b7f d1b7fa2 A:211-217,253-260,261-273,283-289 1l3k d1l3ka2 A:105-111,147-154,155-166,175-180 3cun d3cunb1 B:405-411,448-455,456-468,474-482 1b7f d1b7fb1 B:125-131,167-174,175-187,193-201 1b7f d1b7fa1 A:125-131,167-174,175-187,193-201 1u1k d1u1ka_ A:105-111,147-154,155-166,175-180 1opi d1opia_ A:376-382,431-437,438-451,459-465 1po6 d1po6a2 A:105-111,147-154,155-166,175-180 1cvj d1cvje1 E:11-17,53-60,61-73,79-87 1cvj d1cvjc1 C:11-17,53-60,61-73,82-87 2f9d d2f9db1 B:19-25,58-65,66-78,84-92 2ad9 d2ad9a1 A:59-65,94-102,103-118,127-131 1pgz d1pgza2 A:105-111,147-154,155-166,175-180 1cvj d1cvja1 A:11-17,53-60,61-73,82-87 3bo2 d3bo2a1 A:10-16,53-60,61-73,79-87 1fj7 d1fj7a_ A:18-24,59-66,67-80,87-91 1cvj d1cvjf1 F:11-17,53-60,61-73,82-87 1cvj d1cvja2 A:99-105,139-146,147-159,168-173 2cqp d2cqpa1 A:925-932,968-975,976-988,994-1002 2f9j d2f9jb1 B:19-25,58-65,66-78,84-92 1x5p d1x5pa1 A:16-22,49-57,58-71,76-84 2f9d d2f9da1 A:19-25,58-65,66-78,84-92 2f9j d2f9ja1 A:19-25,58-65,66-78,84-92 1d9a d1d9aa_ A:2-8,42-50,52-64,74-80 1ha1 d1ha1a2 A:104-110,146-153,154-165,174-179 1zzn d1zzna1 A:10-16,53-60,61-73,82-87 2adc d2adca2 A:454-460,492-499,500-512,519-527 1u1n d1u1na_ A:105-111,147-154,155-166,175-180 1x4b d1x4ba1 A:28-34,70-77,78-89,98-103 1cvj d1cvjh1 H:11-17,53-60,61-73,79-87 2b0g d2b0ga1 A:9-15,46-53,54-66,74-81 1u1p d1u1pa_ A:105-111,147-154,155-166,175-180 1u1o d1u1oa_ A:105-111,147-154,155-166,175-180 1wex d1wexa_ A:16-22,51-59,60-75,83-88 1qm9 d1qm9a1 A:5-11,42-48,50-64,71-76 1fxl d1fxla1 A:39-45,81-88,89-101,107-115 1u1r d1u1ra_ A:105-111,147-154,155-166,175-180 1sxl d1sxla_ A:12-20,55-64,64-78,87-91 2cph d2cpha1 A:463-468,505-512,513-528,535-540 1g2e d1g2ea1 A:39-45,81-88,89-101,107-115 1wwh d1wwhc1 C:173-179,208-215,216-227,234-242 2up1 d2up1a2 A:105-111,147-154,155-166,175-180 1u1q d1u1qa_ A:105-111,147-154,155-166,175-180 1u1l d1u1la_ A:105-111,147-154,155-166,175-180 1cvj d1cvjc2 C:99-105,139-146,147-160,165-173 1cvj d1cvjg1 G:11-17,53-60,61-73,79-87 1wg5 d1wg5a_ A:16-22,58-64,66-77,86-91 2ghp d2ghph3 H:210-216,254-261,262-274,279-287 1x4c d1x4ca1 A:16-22,51-58,59-71,80-90 1yty d1ytyb2 B:112-117,152-159,160-171,180-185 2ghp d2ghpd3 D:210-216,254-261,262-274,279-287 1x5t d1x5ta1 A:6-12,49-56,57-70,75-83 1cvj d1cvje2 E:99-105,139-146,147-161,165-173 1zh5 d1zh5b2 B:112-117,152-159,160-171,180-185 2cqi d2cqia1 A:9-15,49-56,57-69,75-83 1cvj d1cvjd1 D:11-17,53-60,61-73,79-87 1a9n d1a9nd_ D:10-16,53-60,61-73,79-87 3bo4 d3bo4a1 A:10-16,53-60,61-73,79-87 1u1m d1u1ma_ A:105-111,147-154,155-166,175-180 1ufw d1ufwa_ A:16-23,59-66,67-78,84-91 1cvj d1cvjb1 B:11-17,53-60,61-73,79-87 1d8z d1d8za_ A:4-10,46-53,54-67,72-80 2k3k d2k3ka1 A:7-13,50-57,58-70,76-84 3bo3 d3bo3a1 A:10-16,53-60,61-73,79-87 1whx d1whxa_ A:222-228,259-265,266-280,287-292 2mss d2mssa_ A:110-115,150-156,159-170,176-184 1zh5 d1zh5a2 A:112-117,152-159,160-171,180-185 2cpd d2cpda1 A:231-237,267-274,275-288,293-301 1whv d1whva_ A:439-447,471-478,480-495,497-501 1x4g d1x4ga1 A:26-33,61-69,70-84,89-96 1wg1 d1wg1a_ A:95-101,129-137,138-150,156-164 1x4a d1x4aa1 A:23-29,62-69,70-83,88-95 1wwh d1wwhd1 D:173-179,208-215,216-227,234-242 2ghp d2ghpa3 A:210-216,254-261,262-273,279-287 3cul d3culb1 B:405-411,448-455,456-468,474-482 2ghp d2ghpe3 E:210-216,254-261,262-273,279-287 1vc5 d1vc5a_ A:10-16,53-60,61-73,79-87 1wwh d1wwhb1 B:173-179,208-215,216-227,234-242 2cqb d2cqba1 A:6-12,48-55,56-68,74-82 1a9n d1a9nb_ B:10-16,53-60,61-73,79-87 1m5p d1m5pf_ F:10-16,53-60,61-73,79-87 1fjc d1fjca_ A:17-23,53-60,62-74,83-88 1x5u d1x5ua1 A:16-22,58-65,66-79,84-92 1wf1 d1wf1a_ A:28-34,63-69,71-85,89-97 2voo d2vooa2 A:112-117,152-159,160-171,180-185 2nz4 d2nz4d1 D:10-16,53-60,61-73,79-87 2dit d2dita1 A:16-22,65-71,73-87,91-99 1oia d1oiaa_ A:10-16,53-60,61-73,82-87 2ghp d2ghpc2 C:41-50,79-88,89-100,106-114 2ghp d2ghpg2 G:41-50,79-88,89-100,106-114 2ghp d2ghpf3 F:210-216,254-261,262-273,279-287 1l3k d1l3ka1 A:15-20,56-63,64-75,84-89 1up1 d1up1a1 A:15-20,56-63,64-75,84-89 2cqd d2cqda1 A:11-17,53-60,61-72,78-86 2ghp d2ghpa2 A:41-49,80-88,89-100,106-114 2dgx d2dgxa1 A:554-561,598-605,606-618,624-632 1s79 d1s79a_ A:112-117,152-158,160-171,178-184 1u6f d1u6fa1 A:43-49,86-92,93-105,111-119 2ghp d2ghpb3 B:210-216,254-261,262-273,279-287 1m5v d1m5vf_ F:10-16,53-60,61-73,82-87 2nz4 d2nz4b1 B:10-16,53-60,61-73,79-87 2ghp d2ghph2 H:41-50,79-88,89-100,106-114 1m5k d1m5kf_ F:10-16,53-60,61-73,79-87 1ha1 d1ha1a1 A:14-19,55-62,63-74,83-88 3beg d3begb1 B:122-128,156-163,164-176,185-195 1wwh d1wwha1 A:173-179,208-215,216-227,235-242 2ghp d2ghpb2 B:41-50,79-88,89-100,106-114 2ghp d2ghpc3 C:210-216,254-261,262-273,279-287 1aud d1auda_ A:9-15,52-59,60-72,78-86 2ghp d2ghpf2 F:41-50,79-88,89-100,106-114 2nz4 d2nz4a1 A:10-16,53-60,61-73,79-87 2vod d2vodb2 B:112-117,152-159,160-171,180-184 1u1q d1u1qa_ A:15-20,56-63,64-75,84-89 2ghp d2ghpg3 G:210-216,254-261,262-273,279-287 2cpj d2cpja1 A:73-79,108-115,117-130,135-143 1m5p d1m5pc_ C:10-16,53-60,61-73,79-87 2ghp d2ghpe2 E:41-50,79-88,89-100,106-114 1m5k d1m5kc_ C:10-16,53-60,61-73,79-87 2ghp d2ghpd2 D:41-50,79-88,89-100,106-114 1m5v d1m5vc_ C:10-16,53-60,61-73,79-87 2cq4 d2cq4a1 A:151-156,192-199,200-211,217-224 1u1r d1u1ra_ A:15-20,56-63,64-75,84-89 2o3d d2o3da1 A:122-127,156-163,164-176,185-195 2von d2vona2 A:112-117,152-159,160-171,180-184 1nu4 d1nu4a_ A:10-16,53-60,61-73,79-87 1oia d1oiab_ B:10-16,53-60,61-73,79-87 1cx0 d1cx0a_ A:10-16,53-60,61-73,79-87 2up1 d2up1a1 A:15-20,56-63,64-75,84-89 1u1o d1u1oa_ A:15-20,56-63,64-75,84-89 1u1l d1u1la_ A:15-20,56-63,64-75,84-89 1x5s d1x5sa1 A:13-19,55-61,63-76,81-89 2ghp d2ghpb1 B:117-123,160-165,167-179,185-193 1fje d1fjeb2 B:100-106,137-143,145-157,163-171 1m5o d1m5of_ F:10-16,53-60,61-73,79-87 1m5o d1m5oc_ C:10-16,53-60,61-73,79-87 2von d2vonb2 B:112-117,152-159,160-171,180-184 1rk8 d1rk8a_ A:72-79,115-122,123-137,141-149 2vod d2voda2 A:112-117,152-159,160-171,180-184 2ghp d2ghpf1 F:117-123,160-165,167-179,185-193 1nu4 d1nu4b_ B:10-16,53-60,61-73,79-87 1urn d1urnb_ B:10-16,53-60,61-73,79-87 1u1k d1u1ka_ A:15-20,56-63,64-75,84-89 2cqc d2cqca1 A:119-124,160-166,168-180,186-193 1u1p d1u1pa_ A:15-20,56-63,64-75,84-89 1u1n d1u1na_ A:15-20,56-63,64-75,84-89 1po6 d1po6a1 A:15-20,56-63,64-75,84-89 1cvj d1cvjg2 G:99-105,139-146,147-159,165-173 1drz d1drza_ A:10-16,53-60,61-73,79-87 1vc0 d1vc0a_ A:10-16,53-60,61-73,79-87 2voo d2voob2 B:112-117,152-159,160-171,180-184 1urn d1urnc_ C:10-16,53-60,61-73,79-87 2nz4 d2nz4c1 C:10-16,53-60,61-73,79-87 1sjf d1sjfa_ A:10-16,53-60,61-73,79-87 1pgz d1pgza1 A:15-20,56-63,64-75,84-89 1vc6 d1vc6a_ A:10-16,53-60,61-73,79-87 1sj3 d1sj3p_ P:10-16,53-60,61-73,79-87 2ghp d2ghpe1 E:117-123,160-166,167-179,185-193 1vby d1vbya_ A:10-16,53-60,61-73,79-87 2oj3 d2oj3a1 A:10-16,53-60,61-73,79-87 2ghp d2ghpa1 A:117-123,160-166,167-179,185-193 1u1m d1u1ma_ A:15-20,56-63,64-75,84-89 1vc7 d1vc7a_ A:10-16,53-60,61-73,79-87 2ghp d2ghpc1 C:117-123,160-166,167-179,185-193 2oih d2oiha1 A:10-16,53-60,61-73,79-87 1urn d1urna_ A:10-16,53-60,61-73,79-87 2ghp d2ghpg1 G:117-123,160-166,167-179,185-193 1vbx d1vbxa_ A:10-16,53-60,61-73,79-87 1sj4 d1sj4p_ P:10-16,53-60,61-73,79-87 2err d2erra1 A:116-123,157-165,166-179,183-191 1wel d1wela1 A:430-436,472-478,480-491,497-505 2ghp d2ghpd1 D:117-123,160-166,167-179,185-193 2ghp d2ghph1 H:117-123,160-166,167-179,185-193 1dz5 d1dz5b_ B:10-15,52-58,60-72,78-86 1dz5 d1dz5a_ A:10-15,52-58,60-72,78-86 2evz d2evza2 A:131-137,170-176,177-189,196-204 3cun d3cuna1 A:305-311,348-355,356-368,374-382 1vbz d1vbza_ A:10-16,53-60,61-73,79-87 3cul d3cula1 A:305-311,348-355,356-368,374-382 1uw4 d1uw4c_ C:51-60,93-102,103-115,124-134 2sxl d2sxla_ A:3-10,46-53,54-67,72-80 1uw4 d1uw4a_ A:51-60,93-102,103-115,124-134 1hl6 d1hl6c_ C:71-79,115-122,123-135,141-149 1wf0 d1wf0a_ A:6-12,43-50,51-61,67-74 1hd0 d1hd0a_ A:98-103,139-146,147-158,167-171 1p27 d1p27b_ B:71-79,115-122,123-135,141-149 2j0s d2j0sd1 D:71-79,115-122,123-135,141-149 1oo0 d1oo0b_ B:71-79,115-122,123-135,141-149 1hd1 d1hd1a_ A:98-103,139-146,147-158,167-172 1rkj d1rkja1 A:14-20,55-61,63-74,83-87 1hl6 d1hl6a_ A:71-79,115-122,123-137,141-149 2hyi d2hyib1 B:71-79,115-122,123-135,141-149 2hyi d2hyih1 H:71-79,115-122,123-135,141-149 1x0f d1x0fa1 A:182-190,224-231,232-243,249-256 2cpe d2cpea1 A:361-367,411-417,419-431,437-445 1wg4 d1wg4a_ A:16-22,51-58,59-71,80-89 1p27 d1p27d_ D:71-79,115-122,123-135,141-149 1p1t d1p1ta_ A:17-22,58-64,66-78,85-92 2cqg d2cqga1 A:106-110,146-153,154-165,170-177 1yty d1ytya2 A:112-117,152-159,160-170,180-185 1wtb d1wtba1 A:182-189,223-231,232-243,249-256 2vop d2vopa2 A:112-117,152-159,160-170,180-185 8. d.58.5 GlnB-like form timeric structures with the orthogonally packed beta-sheets ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1nh7 d1nh7a2 A:212-221,246-255,258-270,270-278 1hwu d1hwuf_ F:1-9,57-66,66-82,88-97 1nh8 d1nh8a2 A:212-221,246-255,255-270,271-278 1hwu d1hwub_ B:1-9,55-66,66-82,88-97 1v3s d1v3sb_ B:1-9,55-66,66-82,88-97 1ul3 d1ul3a_ A:1-9,55-66,66-82,88-97 1v3s d1v3sc_ C:1-9,55-66,66-82,88-97 1vfj d1vfjc_ C:1-9,55-66,66-82,88-97 2pii d2piia_ A:1-9,55-66,66-82,89-96 1v9o d1v9oc_ C:1-9,55-66,66-82,88-97 1pil d1pila_ A:1-9,55-66,66-82,89-96 1hwu d1hwud_ D:1-9,55-66,66-82,88-97 1v9o d1v9oa_ A:1-9,55-66,66-82,88-97 1v3r d1v3ra_ A:1-9,55-66,66-82,88-97 2gnk d2gnka_ A:1-9,55-66,66-82,89-96 1gnk d1gnkb_ B:1-9,55-66,66-82,88-96 1ul3 d1ul3d_ D:1-9,54-66,66-82,88-96 1v99 d1v99d1 D:1-9,49-58,58-73,79-85 1v9b d1v9bb1 B:1-9,49-58,58-73,79-85 1hwu d1hwua_ A:1-9,54-66,66-82,88-97 1v99 d1v99a1 A:1-9,49-58,58-73,79-85 2nuu d2nuuk1 K:1-9,55-66,69-82,88-97 2nuu d2nuug1 G:1-9,55-66,69-82,88-97 2nuu d2nuuj1 J:1-9,55-66,66-82,88-97 2nuu d2nuuh1 H:1-9,55-66,66-82,88-97 1umj d1umjb_ B:1-9,47-58,58-73,79-85 2nuu d2nuul1 L:1-9,55-66,66-82,88-97 1v99 d1v99b1 B:1-9,49-58,61-73,79-85 1v9b d1v9bd1 D:1-9,49-58,61-73,79-85 2nuu d2nuui1 I:1-9,55-66,66-82,88-97 1hwu d1hwue_ E:1-9,57-66,66-82,89-97 1v9b d1v9ba1 A:1-9,49-58,58-73,80-85 1p1l d1p1la_ A:1-10,50-60,59-74,80-86 2zfh d2zfhf1 F:67-76,117-127,126-141,147-153 2zfh d2zfhd1 D:67-76,117-127,126-141,147-153 2ns1 d2ns1b1 B:0-9,55-67,66-82,88-96 2zfh d2zfhc1 C:67-76,117-127,126-141,147-153 1vhf d1vhfa_ A:0-9,49-59,58-73,79-85 1xk8 d1xk8b_ B:44-53,94-104,103-118,124-130 2zfh d2zfhe1 E:67-76,117-127,126-141,147-153 1xk8 d1xk8c_ C:44-53,94-104,103-118,124-130 1xk8 d1xk8e_ E:44-53,94-104,103-118,124-130 1hwu d1hwuc_ C:1-9,57-66,66-83,89-97 1gnk d1gnka_ A:1-9,53-66,66-82,88-96 1kr4 d1kr4a_ A:6-15,55-65,64-79,85-90 2zfh d2zfha1 A:67-76,117-127,126-141,147-153 1ufl d1uflb_ B:1-9,55-66,66-82,89-97 1ul3 d1ul3c_ C:1-9,55-66,66-82,89-97 2zfh d2zfhb1 B:67-76,117-127,126-141,147-153 1osc d1oscc_ C:10-19,60-70,69-84,90-96 1v3r d1v3rc_ C:1-9,55-66,66-82,89-97 1ufl d1uflc_ C:1-9,55-66,66-82,89-97 1v9o d1v9ob_ B:1-9,55-66,66-82,89-97 1vfj d1vfjb_ B:1-9,55-66,66-82,89-97 1ul3 d1ul3b_ B:1-9,55-66,66-82,89-97 1v3s d1v3sa_ A:1-9,55-66,66-82,89-97 1o51 d1o51a_ A:-1-11,61-71,71-86,89-98 1vfj d1vfja_ A:1-9,55-66,66-82,89-97 1v3r d1v3rb_ B:1-9,55-66,66-82,89-97 1o5j d1o5ja_ A:0-9,49-59,58-73,79-84 1j2v d1j2va_ A:1-9,43-58,58-73,79-85 1nza d1nzaa_ A:1-10,51-61,63-76,81-87 1umj d1umja_ A:1-9,43-58,58-73,80-85 1v9b d1v9bf1 F:1-9,43-58,58-73,79-85 1v99 d1v99f1 F:1-9,43-58,58-73,79-85 1v9b d1v9be1 E:1-9,43-58,58-73,79-85 1v99 d1v99c1 C:1-9,43-58,58-73,79-85 1q1k d1q1ka2 A:226-232,264-270,274-285,287-293 1uku d1ukua_ A:1-9,43-58,58-73,80-85 1v99 d1v99e1 E:1-9,43-58,58-73,79-85 1v9b d1v9bc1 C:1-9,43-58,58-73,80-85 2cz4 d2cz4a1 A:2-15,54-63,63-79,84-95 2cz4 d2cz4c1 C:2-15,54-63,63-79,84-95 2cz4 d2cz4b1 B:2-15,54-63,63-79,84-95 1osc d1oscb_ B:10-19,60-70,69-84,90-100 1naq d1naqe_ E:10-19,60-70,69-84,90-100 1osc d1oscd_ D:10-19,60-70,69-84,90-100 1xk8 d1xk8a_ A:44-53,94-104,103-118,124-134 1xk8 d1xk8d_ D:44-53,94-104,103-118,124-134 1xk8 d1xk8f_ F:44-53,94-104,103-118,124-134 1osc d1osca_ A:10-19,60-70,69-84,90-100 1osc d1osce_ E:10-19,60-70,69-85,90-100 1naq d1naqd_ D:10-19,60-70,69-85,90-100 1naq d1naqc_ C:10-19,60-70,69-84,90-100 1h3d d1h3da2 A:226-232,264-270,274-285,289-293 1osc d1oscf_ F:10-19,60-70,69-85,90-100 1naq d1naqa_ A:10-19,55-70,69-85,90-96 1naq d1naqf_ F:10-19,60-70,69-85,90-100 1qy7 d1qy7b_ B:1-9,50-66,66-82,89-97 1qy7 d1qy7c_ C:1-9,50-66,66-82,89-97 1qy7 d1qy7a_ A:1-9,50-66,66-82,89-97 1naq d1naqb_ B:10-19,60-70,69-85,90-100 1v6h d1v6hb_ B:1-10,51-61,60-75,81-91 1v6h d1v6hc_ C:1-10,51-61,60-75,81-91 1v6h d1v6ha_ A:1-10,51-61,60-75,81-91 1ufl d1ufla_ A:1-9,48-66,66-82,88-97 9. d.58.26 GHMP Kinase, C-terminal domain common fold is elaborated with additional secondary structures ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1k47 d1k47e2 E:200-207,297-304,305-320,321-329 1k47 d1k47b2 B:200-207,297-304,305-320,321-329 1k47 d1k47f2 F:200-209,296-304,305-320,321-329 1k47 d1k47a2 A:200-209,296-304,305-320,321-329 1k47 d1k47d2 D:200-209,296-304,305-320,321-329 1k47 d1k47c2 C:200-209,296-304,305-320,321-329 1s4e d1s4ee2 E:181-190,309-317,316-328,338-344 1fwk d1fwkc2 C:170-177,263-270,273-286,287-293 1fwl d1fwlc2 C:170-177,263-270,273-286,287-293 1h74 d1h74c2 C:170-177,263-270,273-286,287-293 1fwk d1fwka2 A:170-177,263-270,273-286,287-293 1h74 d1h74b2 B:170-177,263-270,273-286,287-293 1h74 d1h74a2 A:170-177,263-270,273-286,287-293 1fwl d1fwla2 A:170-177,263-270,273-286,287-293 1s4e d1s4ec2 C:181-190,309-317,316-326,338-344 1h74 d1h74d2 D:170-177,263-270,273-286,287-293 1fwl d1fwlb2 B:170-177,263-270,273-286,287-293 1fwk d1fwkb2 B:170-177,263-270,273-286,287-293 1h73 d1h73a2 A:170-177,263-270,273-286,287-293 1fwl d1fwld2 D:171-177,263-270,273-286,286-292 1fwk d1fwkd2 D:170-177,263-270,273-286,287-293 1h72 d1h72c2 C:170-177,263-270,273-286,287-293 1oj4 d1oj4b2 B:167-175,243-249,250-261,265-273 2r42 d2r42a2 A:230-239,337-344,349-364,365-372 1uek d1ueka2 A:150-159,235-241,243-258,258-266 1oj4 d1oj4a2 A:167-175,243-249,250-261,265-273 1kvk d1kvka2 A:230-239,337-344,349-364,365-372 1fi4 d1fi4a2 A:191-199,305-313,315-328,367-375 1vis d1visa2 A:187-193,280-286,290-302,303-309 1kkh d1kkha2 A:192-198,285-291,295-307,308-314 1wuu d1wuua2 A:217-226,350-358,358-373,375-381 1wuu d1wuub2 B:217-226,350-358,358-373,375-381 1wuu d1wuud2 D:217-226,350-358,358-373,375-381 1wuu d1wuuc2 C:217-226,350-358,358-373,375-381 1s4e d1s4ei2 I:181-190,309-317,316-336,338-344 1s4e d1s4eb2 B:181-190,309-317,316-336,338-345 1s4e d1s4eh2 H:181-190,309-317,316-336,338-344 1s4e d1s4ef2 F:181-190,309-317,316-336,338-344 1s4e d1s4ed2 D:181-190,309-317,316-336,338-344 1s4e d1s4ea2 A:181-190,309-317,316-336,338-344 1pie d1piea2 A:214-222,352-360,360-379,382-387 1mg7 d1mg7b2 B:213-221,307-314,320-336,340-347 1mg7 d1mg7a2 A:213-221,307-314,320-336,340-347 10. c.8.4 PA domain The "swivelling" beta/beta/alpha domain 3 layers: b/b/a; the central sheet is parallel, and the other one is antiparallel; there are some variations in topology ! this domain is thought to be mobile in most multi-domain proteins known to contain it 1cx8 d1cx8d2 D:198-204,207-216,338-349,371-378 2pvv d2pvva2 A:126-133,135-141,298-309,339-347 3bhx d3bhxa2 A:126-133,135-141,298-309,339-347 1cx8 d1cx8e2 E:198-204,211-216,338-349,371-378 2or4 d2or4a2 A:126-133,135-141,298-309,339-347 3bi0 d3bi0a2 A:126-133,135-141,298-309,339-347 3bi1 d3bi1a2 A:126-133,135-141,298-309,339-347 1de4 d1de4c2 C:198-206,207-216,338-349,370-378 2pvw d2pvwa2 A:126-133,135-141,298-309,339-347 1cx8 d1cx8f2 F:198-204,211-216,338-349,371-378 2oot d2oota2 A:126-133,135-141,298-309,339-347 2jbj d2jbja2 A:126-133,135-141,298-309,339-347 2c6c d2c6ca2 A:126-133,135-141,298-309,339-347 2cij d2cija2 A:126-133,135-141,298-309,339-347 1de4 d1de4f2 F:198-205,207-216,338-349,371-378 1cx8 d1cx8c2 C:198-204,212-216,338-349,371-378 2jbk d2jbka2 A:126-133,135-141,298-309,339-347 1cx8 d1cx8b2 B:198-205,211-216,338-349,371-378 2nsu d2nsub2 B:198-205,211-216,338-349,371-378 1de4 d1de4i2 I:198-205,211-216,338-349,371-378 2c6g d2c6ga2 A:126-133,135-141,298-309,340-347 2c6p d2c6pa2 A:126-133,135-141,298-309,342-347 1de4 d1de4i2 I:198-205,207-211,338-349,371-378 11. c.77.1 Isocitrate/Isopropylmalate dehydrogenase-like the constituent families form similar dimers ! Isocitrate/Isopropylmalate dehydrogenase-like consists of two intertwined (sub)domains related by pseudo dyad; duplication ! 3 layers: a/b/a; single mixed beta-sheet of 10 strands, order 213A945867 (A=10); strands from 5 to 9 are antiparallel to the rest 1xco d1xcoe_ E:150-158,159-166,268-284,285-293 1ptm d1ptmb_ B:149-156,157-164,265-278,281-287 1ps6 d1ps6b_ B:149-156,157-164,265-278,281-287 1xco d1xcof_ F:149-158,159-166,268-284,285-294 1vlc d1vlca_ A:99-109,128-136,238-253,259-266 2af4 d2af4d1 D:148-156,165-171,274-290,291-300 2ayq d2ayqa_ A:102-110,128-136,241-256,262-268 1xco d1xcod_ D:149-158,159-166,268-284,285-294 1xco d1xcoa_ A:149-158,159-166,268-284,285-294 1xco d1xcoc_ C:149-158,159-166,268-284,285-294 1xco d1xcob_ B:149-158,159-166,268-284,285-294 2af4 d2af4c1 C:148-156,165-171,274-290,291-300 1ps7 d1ps7a_ A:149-156,157-164,265-278,281-287 2af3 d2af3c1 C:148-156,165-171,274-290,291-300 1qzt d1qztd_ D:148-156,165-171,274-290,291-300 2ayq d2ayqb_ B:102-110,128-136,241-256,262-268 1qzt d1qzta_ A:148-157,165-171,274-290,290-300 1qzt d1qztc_ C:148-157,165-171,274-290,290-300 1qzt d1qztb_ B:148-156,165-171,274-290,291-300 2af3 d2af3d1 D:148-157,165-171,274-290,290-300 1r5j d1r5ja_ A:151-161,162-170,272-288,289-298 1v53 d1v53a1 A:102-110,128-136,241-256,262-268 1td9 d1td9f_ F:149-158,159-166,268-284,285-294 1td9 d1td9a_ A:149-158,159-166,268-284,285-294 1td9 d1td9d_ D:149-158,159-166,268-284,285-294 1td9 d1td9e_ E:149-158,159-166,268-284,285-294 1td9 d1td9b_ B:149-158,159-166,268-284,285-294 1v53 d1v53b1 B:102-110,128-136,241-256,262-268 1ptm d1ptma_ A:149-156,157-164,265-278,281-287 1td9 d1td9c_ C:149-158,159-166,268-284,285-294 1xac d1xaca_ A:98-108,126-134,236-252,257-264 1r5j d1r5jb_ B:151-161,162-170,272-288,289-298 1xad d1xada_ A:98-108,126-134,236-252,257-264 1ps7 d1ps7c_ C:149-156,157-164,269-278,281-287 1osi d1osib_ B:98-108,126-134,236-251,257-264 1r8k d1r8ka_ A:149-156,157-164,265-278,281-287 1osi d1osia_ A:98-108,126-134,236-251,257-264 1osj d1osjb_ B:98-108,126-134,236-251,257-264 1lwd d1lwdb_ B:106-113,126-135,270-286,290-297 1wal d1wala_ A:98-108,126-134,236-251,257-264 1lwd d1lwda_ A:106-113,126-135,270-286,290-297 1osi d1osic_ C:98-108,126-134,236-251,257-264 1ps6 d1ps6a_ A:149-156,157-164,265-278,281-287 1hex d1hexa_ A:98-108,126-134,236-251,257-264 1g2u d1g2ua_ A:98-108,126-134,236-251,257-264 1osi d1osid_ D:98-108,126-134,236-251,257-264 1vmi d1vmia_ A:147-156,161-166,269-285,285-295 1xab d1xaba_ A:98-108,126-134,236-251,257-264 1idm d1idma_ A:96-106,124-132,234-249,255-262 1dr0 d1dr0a_ A:98-108,126-134,236-251,257-264 1r8k d1r8kb_ B:149-156,157-164,265-278,281-287 1gc9 d1gc9a_ A:98-108,126-134,236-251,257-264 1ipd d1ipda_ A:98-108,126-134,236-251,257-264 1xaa d1xaaa_ A:98-108,126-134,236-251,257-264 1t0l d1t0lb_ B:105-112,125-134,270-286,290-297 1t0l d1t0ld_ D:105-112,125-134,270-286,290-297 1t0l d1t0lc_ C:105-112,125-134,270-286,290-297 1t0l d1t0la_ A:105-112,125-134,270-286,290-297 1gc8 d1gc8b_ B:98-108,126-134,236-252,257-264 1ps7 d1ps7d_ D:149-156,157-164,265-278,281-287 2g4o d2g4oc1 C:93-101,115-123,230-246,251-257 1dr8 d1dr8a_ A:97-108,126-134,236-252,257-264 1a05 d1a05a_ A:101-108,128-135,241-257,262-269 1a05 d1a05b_ B:101-108,128-135,241-257,262-269 1osj d1osja_ A:98-108,126-134,236-252,257-264 1ps7 d1ps7b_ B:149-156,157-164,265-278,281-287 1w0d d1w0dc_ C:93-101,115-123,230-246,251-257 2g4o d2g4oa1 A:93-101,115-123,230-246,251-257 2g4o d2g4ob1 B:93-101,115-123,230-246,251-257 1w0d d1w0dd_ D:93-101,115-123,230-246,251-257 2g4o d2g4od1 D:93-101,115-123,230-246,251-257 1w0d d1w0da_ A:93-101,115-123,230-246,251-257 1w0d d1w0db_ B:93-101,115-123,230-246,251-257 1dr0 d1dr0b_ B:98-108,126-134,236-252,257-264 1hqs d1hqsa_ A:116-123,139-146,306-322,327-335 1dpz d1dpza_ A:98-108,126-134,236-252,257-264 1dr8 d1dr8b_ B:98-108,126-134,236-252,257-264 1cnz d1cnzb_ B:105-113,132-140,246-262,267-274 1ika d1ikaa_ A:124-132,148-155,302-318,324-330 1bl5 d1bl5a_ A:125-132,148-155,302-318,324-330 1cnz d1cnza_ A:105-113,132-140,246-262,267-274 1hj6 d1hj6a_ A:125-133,147-155,302-318,323-330 1dpz d1dpzb_ B:98-108,126-134,236-252,257-264 1sjs d1sjsa_ A:125-133,147-155,302-318,324-330 1idc d1idca_ A:125-133,147-155,302-318,324-330 1cm7 d1cm7a_ A:105-113,132-140,246-262,267-274 9icd d9icda_ A:125-133,147-155,302-318,324-330 1cm7 d1cm7b_ B:105-113,132-140,246-262,267-274 1idf d1idfa_ A:125-132,148-155,302-318,324-330 1gro d1groa_ A:125-133,147-155,302-318,324-330 8icd d8icda_ A:125-133,147-155,302-318,324-330 1iso d1isoa_ A:125-132,148-155,302-318,324-330 1pb1 d1pb1a_ A:125-133,147-155,302-318,324-330 5icd d5icda_ A:125-133,147-155,302-318,324-330 1ai3 d1ai3a_ A:125-133,147-155,302-318,324-330 6icd d6icda_ A:125-133,147-155,302-318,324-330 1ai2 d1ai2a_ A:125-133,147-155,302-318,324-330 1grp d1grpa_ A:125-133,147-155,302-318,324-330 3icd d3icda_ A:125-133,147-155,302-318,324-330 7icd d7icda_ A:125-133,147-155,302-318,324-330 1pb3 d1pb3a_ A:125-133,147-155,302-318,324-330 4icd d4icda_ A:125-133,147-155,302-318,324-330 1cw1 d1cw1a_ A:125-133,147-155,302-318,324-330 1ide d1idea_ A:125-133,147-155,302-318,324-330 1cw4 d1cw4a_ A:125-133,147-155,302-318,324-330 1cw7 d1cw7a_ A:125-133,147-155,302-318,324-330 1p8f d1p8fa_ A:125-133,147-155,302-318,324-330 1idd d1idda_ A:125-133,147-155,302-318,324-330 1gc8 d1gc8a_ A:1100-1108,1126-1134,1236-1252,1257-1264 1u7n d1u7nb_ B:120-128,134-140,210-217,283-288 1t09 d1t09b_ B:105-112,125-133,278-285,290-297 1dr8 d1dr8a_ A:97-108,126-134,215-227,257-264 1ipd d1ipda_ A:98-108,126-134,215-227,257-264 1gc8 d1gc8b_ B:98-108,126-134,215-227,257-264 1dr8 d1dr8b_ B:98-108,126-134,215-227,257-264 1hex d1hexa_ A:98-108,126-134,215-227,257-264 1osj d1osjb_ B:98-108,126-134,215-227,257-264 1idm d1idma_ A:96-106,124-132,213-225,255-262 1wal d1wala_ A:98-108,126-134,215-227,257-264 1osi d1osia_ A:98-108,126-134,215-227,257-264 1osi d1osib_ B:98-108,126-134,215-227,257-264 1xad d1xada_ A:98-108,126-134,215-227,257-264 1xac d1xaca_ A:98-108,126-134,215-227,257-264 1j1w d1j1wd_ D:140-147,404-415,543-560,565-572 1j1w d1j1wa_ A:140-147,404-415,543-560,565-572 1gc9 d1gc9a_ A:98-108,126-134,215-227,257-264 1osi d1osid_ D:98-108,126-134,215-227,257-264 1osi d1osic_ C:98-108,126-134,215-227,257-264 1v53 d1v53b1 B:102-110,128-136,220-232,262-268 1dr0 d1dr0a_ A:98-108,126-134,215-227,257-264 1dr0 d1dr0b_ B:98-108,126-134,215-227,257-264 1dpz d1dpzb_ B:98-108,126-134,215-227,257-264 1g2u d1g2ua_ A:98-108,126-134,215-227,257-264 1j1w d1j1wb_ B:140-147,404-415,543-560,565-571 1j1w d1j1wc_ C:140-147,404-415,543-560,565-571 1hqs d1hqsb_ B:116-123,139-146,306-322,328-335 1wpw d1wpwb_ B:91-99,110-118,219-235,240-247 1xaa d1xaaa_ A:98-108,126-134,215-227,257-264 1xab d1xaba_ A:98-108,126-134,215-227,257-264 1itw d1itwd_ D:140-147,404-415,543-560,565-572 1wpw d1wpwa_ A:91-99,110-118,219-235,240-247 1itw d1itwa_ A:140-147,404-415,543-560,565-572 1itw d1itwb_ B:140-147,404-415,543-560,565-572 1itw d1itwc_ C:140-147,404-415,543-560,565-572 1u7n d1u7na_ A:120-128,134-140,225-253,283-288 1u7n d1u7nb_ B:120-128,134-140,225-253,283-288 1vi1 d1vi1b_ B:121-130,132-139,224-254,281-286 1vi1 d1vi1a_ A:121-130,132-139,224-254,281-286 1itw d1itwd_ D:191-203,213-219,418-426,430-440 1itw d1itwb_ B:191-203,213-219,418-426,430-440 12. c.132.1 Bacterial fluorinating enzyme, N-terminal domain Bacterial fluorinating enzyme, N-terminal domain 3 layers: a/b/a; mixed beta-sheet of 6 strands; order: 213546, strand 5 is antiparallel to the rest; topological similarity to the MogA-like family fold 2c5b d2c5bc2 C:85-93,116-122,125-135,134-143 2c4t d2c4tc2 C:85-93,116-122,125-135,134-143 2c4u d2c4ub2 B:85-93,116-123,125-135,134-142 2c4u d2c4ue2 E:85-93,116-123,125-135,134-142 2c5h d2c5hb2 B:85-93,116-123,125-135,134-142 2c4u d2c4ud2 D:85-93,116-123,125-135,134-142 2c5h d2c5ha2 A:85-93,116-123,125-135,134-142 2c5b d2c5bb2 B:85-93,116-123,125-135,134-142 2c5h d2c5hc2 C:85-93,116-123,125-135,134-142 2c5b d2c5ba2 A:85-93,116-123,125-135,134-142 2c4u d2c4ua2 A:85-93,116-123,125-135,134-142 2v7x d2v7xa2 A:85-93,116-123,125-135,134-143 2v7x d2v7xb2 B:85-93,116-123,125-135,134-143 2c4u d2c4uf2 F:85-93,116-123,125-135,134-142 2cc2 d2cc2c2 C:86-93,116-122,125-135,134-142 2v7x d2v7xc2 C:85-93,116-123,125-135,134-142 2c4u d2c4uc2 C:85-93,116-123,125-135,134-142 1rqr d1rqrc2 C:86-93,116-122,125-135,134-142 1rqr d1rqrb2 B:86-93,116-122,125-135,134-142 2v7v d2v7vb2 B:86-93,116-122,125-135,134-142 2v7w d2v7wb2 B:86-93,116-122,125-135,134-142 1rqp d1rqpa2 A:86-93,116-122,125-135,134-142 2v7v d2v7va2 A:86-93,116-122,125-135,134-142 1rqr d1rqra2 A:86-93,116-122,125-135,134-142 2v7w d2v7wc2 C:86-93,116-122,125-135,134-142 2cc2 d2cc2a2 A:86-93,116-122,125-135,134-142 2v7v d2v7vc2 C:86-93,116-122,125-135,134-142 2v7u d2v7ub2 B:86-93,116-122,125-135,134-142 2v7w d2v7wa2 A:86-93,116-122,125-135,134-142 2v7t d2v7tb2 B:86-93,116-122,125-135,134-142 1rqp d1rqpb2 B:86-93,116-122,125-135,134-142 2c2w d2c2wb2 B:86-93,116-122,125-135,134-142 2v7u d2v7ua2 A:86-93,116-122,125-135,134-142 2v7u d2v7uc2 C:86-93,116-122,125-135,134-142 2v7t d2v7tc2 C:86-93,116-122,125-135,134-142 1rqp d1rqpc2 C:86-93,116-122,125-135,134-142 2v7t d2v7ta2 A:86-93,116-122,125-135,134-142 2c4t d2c4tb2 B:86-93,116-122,125-135,134-142 2c2w d2c2wc2 C:86-93,116-122,125-135,134-142 2cc2 d2cc2b2 B:86-93,116-122,125-135,134-142 2c4t d2c4ta2 A:86-93,116-122,125-135,134-142 2c2w d2c2wa2 A:86-93,116-122,125-135,134-142 2cbx d2cbxb2 B:86-93,116-122,125-135,134-142 2cbx d2cbxa2 A:86-93,116-122,125-135,134-142 2cbx d2cbxc2 C:86-93,116-122,125-135,134-142 14. d.30.1 Allophycocyanin linker chain (domain) Allophycocyanin linker chain (domain) beta(2)-alpha-beta; 2 layers: alpha/beta 1b33 d1b33o_ O:2-10,26-33,32-47,48-57 1b33 d1b33n_ N:2-10,26-33,32-47,48-57 15. d.328.1 CorA soluble domain-like CorA soluble domain-like beta(2)-alpha-beta-alpha(2)-beta(4)-alpha(3); 3 layers: a/b/a; mixed beta-sheet, order 2137654; strands 3 and 7 are parallel 2iub d2iubh1 H:27-36,37-45,46-56,58-66 2iub d2iubj1 J:27-36,37-45,46-56,58-66 2iub d2iubb1 B:27-36,37-45,46-56,58-66 2iub d2iuba1 A:27-36,37-45,46-56,58-66 2bbj d2bbjd1 D:27-36,37-44,46-56,59-66 2bbj d2bbjb1 B:27-36,37-45,46-56,58-66 2iub d2iubg1 G:27-36,37-45,46-56,58-66 2hn2 d2hn2a1 A:1027-1036,1037-1045,1046-1056,1058-1066 2hn2 d2hn2c1 C:3027-3036,3037-3045,3046-3056,3058-3066 2hn2 d2hn2e1 E:5027-5036,5037-5045,5046-5056,5058-5066 2iub d2iube1 E:27-36,37-45,46-56,58-66 2hn2 d2hn2b1 B:2027-2036,2037-2045,2046-2056,2058-2066 2hn2 d2hn2d1 D:4027-4036,4037-4045,4046-4056,4058-4066 2iub d2iubd1 D:27-36,37-45,46-56,58-66 2iub d2iubi1 I:27-36,37-45,46-56,58-66 2iub d2iubc1 C:27-36,37-45,46-56,58-66 2bbj d2bbje1 E:27-36,37-45,46-56,58-66 2iub d2iubf1 F:27-36,37-45,46-56,58-66 2bbh d2bbha1 A:27-36,37-45,46-56,59-66 2bbj d2bbja1 A:27-36,37-45,46-56,58-66 2bbj d2bbjf1 F:27-36,37-45,46-56,58-66 17. c.91.1 PEP carboxykinase-like PEP carboxykinase-like contains a P-loop NTP-binding motif; mixed beta-sheet folds into a barrel-like structure with helices packed on one side 1knx d1knxa2 A:139-146,147-154,159-171,172-179 1knx d1knxb2 B:139-146,147-154,159-171,172-179 1kkl d1kklb_ B:140-147,148-155,160-172,173-180 1kkl d1kklc_ C:140-147,148-155,160-172,173-180 1kkl d1kkla_ A:140-147,148-155,160-172,173-180 1kkm d1kkma_ A:140-147,148-155,160-172,173-180 1kkm d1kkmb_ B:140-147,148-155,160-172,173-180 1ko7 d1ko7a2 A:136-143,144-151,156-168,169-176 1kkm d1kkmc_ C:140-147,148-155,160-172,173-180 1ko7 d1ko7b2 B:136-143,144-151,156-168,169-176 1jb1 d1jb1a_ A:140-147,148-155,160-172,173-180 1knx d1knxf2 F:139-146,147-154,156-171,172-178 1knx d1knxe2 E:139-146,147-154,156-171,172-178 1knx d1knxc2 C:139-146,147-154,156-171,172-178 1knx d1knxd2 D:139-146,147-154,156-171,172-178 1oen d1oena1 A:232-239,241-248,253-260,263-269 1xkv d1xkvb1 B:216-223,225-232,237-244,247-253 1j3b d1j3ba1 A:216-223,225-232,237-244,247-253 1xkv d1xkva1 A:216-223,225-232,237-244,247-253 2py7 d2py7x1 X:232-239,241-248,253-260,263-269 1ayl d1ayla1 A:232-239,241-248,253-260,263-269 1aq2 d1aq2a1 A:232-239,241-248,253-260,263-269 1k3d d1k3da1 A:232-239,241-248,253-260,263-269 2pxz d2pxzx1 X:232-239,241-248,253-260,263-269 1os1 d1os1a1 A:232-239,241-248,253-260,263-269 2pc9 d2pc9b1 B:216-223,225-232,237-244,247-253 2olr d2olra1 A:232-239,241-248,253-260,263-269 2olq d2olqa1 A:232-239,241-248,253-260,263-269 2gmv d2gmvb1 B:264-273,275-283,289-296,302-311 1k3c d1k3ca1 A:232-239,241-248,253-260,263-269 1ii2 d1ii2b1 B:205-212,214-221,226-233,236-242 1ii2 d1ii2a1 A:205-212,214-221,226-233,236-242 2gmv d2gmva1 A:264-273,275-284,289-296,302-311 1j3b d1j3bb1 B:216-223,225-232,237-244,247-252 1m51 d1m51a1 A:264-273,275-284,289-296,302-311 1nhx d1nhxa1 A:264-273,275-284,289-296,302-311 1khe d1khea1 A:264-273,275-284,289-296,302-311 2pc9 d2pc9a1 A:216-223,225-232,237-244,247-252 2pc9 d2pc9d1 D:216-223,225-232,237-244,247-252 2pc9 d2pc9c1 C:216-223,225-232,237-244,247-252 1khb d1khba1 A:264-273,275-284,289-296,302-310 1khg d1khga1 A:264-273,275-285,289-296,302-311 1khf d1khfa1 A:264-273,275-285,289-296,302-311 1j3b d1j3bb1 B:216-223,225-232,237-244,252-259 2pc9 d2pc9c1 C:216-223,225-232,237-244,252-259 2pc9 d2pc9a1 A:216-223,225-232,237-244,252-259 2pc9 d2pc9d1 D:216-223,225-232,237-244,252-259 1knx d1knxe2 E:139-146,147-154,156-171,177-186 1knx d1knxc2 C:139-146,147-154,156-171,177-186 1knx d1knxf2 F:139-146,147-154,156-171,177-186 1knx d1knxd2 D:139-146,147-154,156-171,177-186 1khb d1khba1 A:264-273,275-284,289-296,310-319 18. d.185.1 LuxS/MPP-like metallohydrolase Share the same "active site motif" HxxEH located in the first core helix, but differ in one of the zinc-binding residues ! LuxS/MPP-like metallohydrolase core: beta-alpha-beta(2)-alpha(2); 2 layers: alpha/beta 2fge d2fgeb2 B:811-820,864-875,876-887,967-974 1kyo d1kyob1 B:27-37,85-95,97-112,184-191 2fge d2fgea2 A:811-820,864-875,876-887,967-974 1ezv d1ezvb1 B:27-39,85-95,97-112,184-191 1qcr d1qcrb1 B:43-55,103-113,115-130,203-210 1sqv d1sqvb1 B:43-55,103-113,115-130,203-210 1p84 d1p84b1 B:27-39,85-95,97-112,184-191 2ibz d2ibzb1 B:27-39,85-95,97-112,184-191 1pp9 d1pp9b1 B:43-55,103-113,115-130,203-210 1kyo d1kyom1 M:27-39,85-95,97-112,184-191 1hr9 d1hr9e1 E:39-50,98-107,107-125,199-206 3cxh d3cxhm1 M:27-39,85-95,97-112,184-191 3cxh d3cxhb1 B:27-39,85-95,97-112,184-191 1pp9 d1pp9o1 O:43-55,103-113,115-130,203-210 1sqp d1sqpb1 B:43-55,103-113,115-130,203-210 1ntz d1ntzb1 B:43-55,103-113,115-130,203-210 1hr6 d1hr6a1 A:39-50,98-107,107-125,199-206 1hr9 d1hr9a1 A:39-50,98-107,107-125,199-206 1kb9 d1kb9b1 B:27-39,85-95,97-112,184-191 1hr8 d1hr8e1 E:39-50,98-107,107-125,199-206 1hr6 d1hr6e1 E:39-50,98-107,107-125,199-206 1hr9 d1hr9g1 G:39-50,98-107,107-125,199-206 1hr8 d1hr8g1 G:39-50,98-107,107-125,199-206 1hr8 d1hr8c1 C:39-50,98-107,107-125,199-206 3cx5 d3cx5b1 B:27-39,85-95,97-112,184-191 3cx5 d3cx5m1 M:27-39,85-95,97-112,184-191 1hr8 d1hr8a1 A:39-50,98-107,107-125,199-206 1hr9 d1hr9c1 C:39-50,98-107,107-125,199-206 1hr6 d1hr6c1 C:39-50,98-107,107-125,199-206 2fyu d2fyub1 B:43-55,103-113,115-130,203-210 1hr6 d1hr6g1 G:39-50,98-107,107-125,199-206 1sqx d1sqxb1 B:43-55,103-113,115-130,203-210 1ntk d1ntkb1 B:43-53,103-113,115-130,203-210 1sqq d1sqqb1 B:43-55,103-113,115-130,203-210 1sqb d1sqbb1 B:43-55,103-113,115-130,203-210 1hr7 d1hr7a1 A:39-50,98-107,107-125,199-206 1ntm d1ntmb1 B:43-53,103-113,115-130,203-210 1hr7 d1hr7c1 C:39-50,98-107,107-125,199-206 1hr7 d1hr7e1 E:39-50,98-107,107-125,199-206 1hr7 d1hr7g1 G:39-50,98-107,107-125,199-206 1l0n d1l0nb1 B:43-55,103-113,115-130,203-210 2a06 d2a06o1 O:43-55,103-113,115-130,203-210 2a06 d2a06b1 B:43-55,103-113,115-130,203-210 1hr6 d1hr6b1 B:46-58,106-116,118-133,207-215 1l0l d1l0lb1 B:43-55,103-113,115-130,203-210 1be3 d1be3a1 A:33-45,93-103,107-120,194-202 1sqv d1sqva1 A:33-43,93-103,105-120,194-202 1hr8 d1hr8b1 B:46-58,106-116,118-133,207-215 1hr6 d1hr6f1 F:46-58,106-116,118-133,207-215 1hr8 d1hr8f1 F:46-58,106-116,118-133,207-215 1hr8 d1hr8h1 H:46-58,106-116,118-133,207-215 1hr7 d1hr7f1 F:46-58,106-116,118-133,207-215 1hr7 d1hr7b1 B:46-58,106-116,118-133,207-215 1nu1 d1nu1a1 A:33-43,93-103,105-120,194-202 1hr6 d1hr6h1 H:46-58,106-116,118-133,207-215 1hr6 d1hr6d1 D:46-58,106-116,118-133,207-215 1hr7 d1hr7h1 H:46-58,106-116,118-133,207-215 1hr9 d1hr9h1 H:46-58,106-116,118-133,207-215 1hr8 d1hr8d1 D:46-58,106-116,118-133,207-215 1hr7 d1hr7d1 D:46-58,106-116,118-133,207-215 1hr9 d1hr9d1 D:46-58,106-116,118-133,207-215 1hr9 d1hr9b1 B:46-58,106-116,118-133,207-215 3bcc d3bccb1 B:43-55,103-113,112-130,203-210 1bgy d1bgyb1 B:43-53,103-113,115-130,203-210 1bgy d1bgyn1 N:43-53,103-113,115-130,203-210 1bgy d1bgym1 M:33-45,93-103,105-120,194-202 1ppj d1ppjo1 O:43-55,103-113,115-130,203-210 1ppj d1ppjb1 B:43-55,103-113,115-130,203-210 1bgy d1bgya1 A:33-45,93-103,105-120,194-202 1hr9 d1hr9f1 F:46-58,106-116,115-133,207-215 1bcc d1bccb1 B:43-55,103-113,112-130,203-210 1be3 d1be3b1 B:43-53,103-113,115-130,203-210 1sqp d1sqpa1 A:33-45,93-103,105-120,194-202 1qcr d1qcra1 A:33-45,93-103,105-120,194-201 1sqb d1sqba1 A:33-45,93-103,105-120,194-202 1l0n d1l0na1 A:33-45,93-103,105-120,194-202 2fyu d2fyua1 A:33-45,93-103,105-120,194-202 1ntz d1ntza1 A:33-45,93-103,105-120,194-202 1ntm d1ntma1 A:33-45,93-103,105-120,194-202 1ppj d1ppjn1 N:33-45,93-103,105-120,194-202 1pp9 d1pp9n1 N:33-45,93-103,105-120,194-202 1sqx d1sqxa1 A:33-45,93-103,105-120,194-202 3bcc d3bcca1 A:33-45,93-103,105-120,194-202 2bcc d2bccb1 B:43-55,103-113,112-130,203-210 1pp9 d1pp9a1 A:33-45,93-103,105-120,194-202 2a06 d2a06n1 N:33-45,93-103,105-120,194-202 1ppj d1ppja1 A:33-45,93-103,105-120,194-202 2bcc d2bcca1 A:33-45,93-103,105-120,194-202 2a06 d2a06a1 A:33-45,93-103,105-120,194-202 1kb9 d1kb9a1 A:48-59,100-109,112-128,205-212 1bcc d1bcca1 A:33-45,93-103,105-120,194-202 1q2l d1q2la1 A:546-557,600-610,612-627,698-707 2ibz d2ibza1 A:48-59,100-109,112-128,205-213 1q2l d1q2la4 A:65-76,125-134,134-152,230-238 1ezv d1ezva1 A:47-58,99-108,111-127,204-212 1ntk d1ntka1 A:33-45,93-103,105-120,194-202 1sqq d1sqqa1 A:33-45,93-103,105-120,194-202 3cxh d3cxha1 A:47-59,100-110,112-128,205-212 1l0l d1l0la1 A:33-45,93-103,105-120,194-202 2fge d2fgeb4 B:58-67,115-124,125-143,234-242 1kyo d1kyoa1 A:47-58,99-108,111-127,204-212 3cxh d3cxhl1 L:47-59,100-110,109-128,205-213 1p84 d1p84a1 A:48-59,100-109,112-128,205-212 1kyo d1kyol1 L:47-58,99-108,111-129,204-212 2fge d2fgea4 A:58-67,115-124,125-143,234-242 3cx5 d3cx5l1 L:48-59,100-109,112-128,205-212 3cx5 d3cx5a1 A:48-59,100-109,112-128,205-212 1sqq d1sqqb2 B:252-264,318-329,329-350,422-429 2a06 d2a06a2 A:250-262,316-327,327-349,420-427 2a06 d2a06n2 N:250-262,316-327,327-349,420-427 1nu1 d1nu1a2 A:250-262,316-327,327-349,420-426 1sqb d1sqbb2 B:252-264,317-329,329-350,422-428 1sqv d1sqva2 A:250-262,316-327,327-349,420-427 1l0l d1l0lb2 B:252-264,317-329,329-350,422-428 1ntm d1ntma2 A:250-262,316-327,327-349,420-427 2fyu d2fyub2 B:252-264,317-329,329-350,422-428 1pp9 d1pp9a2 A:250-262,316-327,327-349,420-427 1pp9 d1pp9n2 N:250-262,316-327,327-349,420-427 1ntz d1ntza2 A:250-262,316-327,327-349,420-426 1sqp d1sqpa2 A:250-262,316-327,327-349,420-427 1ntk d1ntka2 A:250-262,316-327,327-349,420-427 3bcc d3bccb2 B:251-263,319-330,329-350,422-428 1ppj d1ppja2 A:250-262,316-327,327-349,420-427 1ppj d1ppjn2 N:250-262,316-327,327-349,420-427 1l0n d1l0na2 A:250-262,316-327,327-349,420-426 1bgy d1bgym2 M:250-262,316-327,327-349,420-426 1sqx d1sqxa2 A:250-262,316-327,327-349,420-427 1be3 d1be3a2 A:250-262,316-327,327-349,420-426 1bgy d1bgya2 A:250-262,316-327,327-349,420-426 1l0l d1l0la2 A:250-262,316-327,327-349,420-427 2fyu d2fyua2 A:250-262,316-327,327-349,420-427 1sqq d1sqqa2 A:250-262,316-327,327-349,420-427 1bcc d1bccb2 B:251-263,319-330,329-350,422-428 1sqb d1sqba2 A:250-262,316-327,327-349,420-427 2bcc d2bcca2 A:250-262,316-327,327-349,420-427 1ntk d1ntkb2 B:252-263,319-329,329-350,422-428 1bcc d1bcca2 A:250-262,316-327,327-349,420-427 1qcr d1qcra2 A:250-262,316-327,327-349,420-427 3bcc d3bcca2 A:250-258,316-327,327-349,420-427 1kyo d1kyol2 L:257-268,324-334,338-357,430-437 1sqp d1sqpb2 B:252-261,318-329,329-350,422-428 1qcr d1qcrb2 B:251-263,319-330,329-350,422-428 1q2l d1q2la3 A:288-298,347-358,364-383,454-460 3cxh d3cxha2 A:258-270,323-335,339-358,431-438 1hr9 d1hr9g2 G:256-268,324-336,337-358,442-448 1hr9 d1hr9e2 E:256-268,324-336,337-358,442-448 1hr6 d1hr6a2 A:256-268,324-336,337-358,442-448 1hr6 d1hr6c2 C:256-268,325-336,337-358,442-448 1hr7 d1hr7a2 A:256-268,324-336,337-358,442-448 1hr9 d1hr9c2 C:256-268,324-336,337-358,442-448 1hr9 d1hr9a2 A:256-268,324-336,337-358,442-448 1hr6 d1hr6e2 E:256-268,325-336,337-358,442-448 1hr8 d1hr8e2 E:256-268,324-336,337-358,442-448 1hr8 d1hr8a2 A:256-268,324-336,337-358,442-448 1hr7 d1hr7c2 C:256-268,324-336,337-358,442-448 1hr7 d1hr7e2 E:256-268,324-336,337-358,442-448 1hr6 d1hr6g2 G:256-268,324-336,337-358,442-448 1hr8 d1hr8g2 G:256-268,324-336,337-358,442-448 1hr8 d1hr8c2 C:256-268,324-336,337-358,442-448 1hr7 d1hr7g2 G:256-268,324-336,337-358,442-448 2bcc d2bccb2 B:251-264,317-330,329-350,422-428 1bgy d1bgyb2 B:251-264,317-330,329-350,422-429 3cx5 d3cx5m2 M:236-246,281-292,293-311,351-357 3cx5 d3cx5b2 B:236-246,281-292,293-311,351-357 1be3 d1be3b2 B:251-264,317-330,329-350,422-429 1bgy d1bgyn2 N:251-264,317-330,329-350,422-429 1kb9 d1kb9b2 B:236-246,281-292,293-311,351-357 2ibz d2ibzb2 B:236-246,281-292,293-311,351-357 2fge d2fgeb1 B:573-583,640-652,654-669,757-764 1l0n d1l0nb2 B:251-264,318-330,329-350,422-429 2fge d2fgea1 A:573-583,640-652,654-669,758-764 1ntz d1ntzb2 B:251-264,318-330,329-350,422-429 1sqx d1sqxb2 B:251-264,318-330,329-350,422-429 1ntm d1ntmb2 B:251-264,317-330,329-350,422-429 1ppj d1ppjb2 B:251-264,318-330,329-350,422-428 1ppj d1ppjo2 O:251-264,318-330,329-350,422-428 2a06 d2a06o2 O:251-264,318-330,329-350,422-428 1sqv d1sqvb2 B:251-264,318-330,329-350,422-428 2a06 d2a06b2 B:251-264,318-330,329-350,422-428 1pp9 d1pp9o2 O:251-264,318-330,329-350,422-428 1pp9 d1pp9b2 B:251-264,318-330,329-350,422-428 1ezv d1ezvb2 B:236-247,281-292,293-311,351-357 3cxh d3cxhb2 B:236-247,281-292,293-311,351-357 3cxh d3cxhm2 M:236-247,281-292,293-311,351-357 1p84 d1p84b2 B:236-247,281-292,293-311,351-357 1kyo d1kyom2 M:236-247,281-292,293-311,351-357 1kyo d1kyob2 B:236-247,281-292,293-311,351-357 1hr8 d1hr8b2 B:264-277,331-344,348-366,439-445 1hr8 d1hr8h2 H:264-277,331-344,348-366,439-445 1hr9 d1hr9d2 D:264-277,331-344,348-366,439-445 3cx5 d3cx5a2 A:258-266,325-335,339-358,431-438 1hr9 d1hr9h2 H:264-277,331-344,348-366,439-445 1hr8 d1hr8f2 F:264-277,331-344,348-366,439-445 1hr7 d1hr7b2 B:264-277,331-344,348-366,439-445 2fge d2fgeb3 B:296-307,358-367,369-391,474-485 1hr9 d1hr9f2 F:264-277,331-344,348-366,439-445 3cx5 d3cx5l2 L:258-266,325-335,339-358,431-438 2fge d2fgea3 A:296-306,359-367,369-391,474-485 3cxh d3cxhl2 L:258-266,325-335,339-358,431-438 1ezv d1ezva2 A:257-265,324-334,338-357,430-437 1kb9 d1kb9a2 A:258-266,325-335,339-358,431-438 1kyo d1kyoa2 A:257-265,324-334,338-357,430-437 2ibz d2ibza2 A:258-266,325-335,339-358,431-438 1p84 d1p84a2 A:258-266,325-335,339-358,431-438 2fge d2fgeb3 B:296-307,366-370,369-391,474-485 2fge d2fgea3 A:296-306,366-370,369-391,474-485 1hr6 d1hr6b2 B:264-274,332-344,348-366,439-445 1hr6 d1hr6d2 D:264-274,332-344,348-366,439-445 1hr6 d1hr6h2 H:264-274,332-344,348-366,439-445 1hr6 d1hr6f2 F:264-274,332-344,348-366,439-445 1hr8 d1hr8d2 D:264-274,332-344,348-366,439-445 1q2l d1q2la2 A:754-764,810-821,824-846,918-928 1hr7 d1hr7h2 H:264-274,332-344,348-366,439-445 1hr7 d1hr7d2 D:264-274,332-344,348-366,439-445 1hr7 d1hr7f2 F:264-274,332-344,348-366,439-445 1hr9 d1hr9b2 B:264-273,331-344,348-366,439-445 19. d.256.1 Ta1353-like Ta1353-like core: beta-alpha-beta(2)-alpha-beta-alpha-beta; 3 layers: a/b/a; antiparallel beta-sheet of 5 strands; order: 51423; 1vgg d1vggf_ F:14-22,79-87,91-102,104-113 1vgg d1vggc_ C:14-22,79-87,91-102,104-113 1vgg d1vgga_ A:14-22,79-87,91-102,104-113 1vgg d1vggd_ D:14-22,79-87,91-102,104-113 1vgg d1vggb_ B:14-22,79-87,91-102,104-113 1vgg d1vgge_ E:13-22,79-87,91-102,104-113 1rlh d1rlha_ A:7-15,72-81,83-98,97-105 21. e.8.1 DNA/RNA polymerases "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain ! DNA/RNA polymerases divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members 1mu2 d1mu2b_ B:104-111,185-192,194-211,230-236 1qht d1qhta2 A:398-405,542-548,552-568,577-584 1s0o d1s0ob2 B:1-9,105-112,117-137,139-146 1s0o d1s0oa2 A:1-9,105-112,117-137,139-146 2agq d2agqa2 A:1-9,105-112,117-137,139-146 1ryr d1ryra2 A:1-9,105-112,117-137,139-146 1jx4 d1jx4a2 A:1-9,105-112,117-137,139-146 1k1q d1k1qa2 A:1-9,105-112,118-138,140-147 1n56 d1n56b2 B:1-9,105-112,117-137,139-146 2rdj d2rdja2 A:1-9,105-112,117-137,139-146 2r8i d2r8ia2 A:1-9,105-112,117-137,139-146 2atl d2atlb2 B:1001-1009,1105-1112,1117-1137,1139-1146 2br0 d2br0a2 A:1-9,105-112,117-137,139-146 1rys d1rysa2 A:1-9,105-112,117-137,139-146 1n48 d1n48a2 A:1-9,105-112,117-137,139-146 1s9f d1s9fd2 D:1-9,105-112,117-137,139-146 1rys d1rysb2 B:1-9,105-112,117-137,139-146 2au0 d2au0a2 A:2-9,105-111,117-137,139-146 2jei d2jeia2 A:1-9,105-112,117-137,139-146 1s97 d1s97a2 A:1-9,105-112,117-137,139-146 2ibk d2ibka2 A:1-9,105-112,117-137,139-146 2rdj d2rdjb2 B:1-9,105-112,117-137,139-146 2asd d2asdb2 B:1001-1009,1105-1112,1117-1137,1139-1146 2atl d2atla2 A:1-9,105-112,117-137,139-146 1n56 d1n56a2 A:1-9,105-112,117-137,139-146 2asd d2asda2 A:1-9,105-112,117-137,139-146 2bqu d2bqua2 A:1-9,105-112,117-137,139-146 2agp d2agpa2 A:1-9,105-112,117-137,139-146 2rdi d2rdia2 A:1-9,105-112,117-137,139-146 2asl d2aslb2 B:1001-1009,1105-1112,1117-1137,1139-1146 1s0m d1s0mb2 B:1-9,105-112,117-137,139-146 1s9f d1s9fb2 B:1-9,105-112,117-137,139-146 2va3 d2va3a2 A:1-9,105-112,117-137,139-146 3bq0 d3bq0a2 A:1-9,105-112,118-138,140-147 2imw d2imwp2 P:1-9,105-112,117-137,139-146 1s10 d1s10a2 A:1-9,105-112,117-137,139-146 2uvw d2uvwa2 A:1-9,105-112,117-137,139-146 2c28 d2c28a2 A:1-9,105-112,117-137,139-146 1jxl d1jxla2 A:1-9,105-112,117-137,139-146 2va2 d2va2a2 A:1-9,105-112,117-137,139-146 1s0n d1s0na2 A:1-9,105-112,117-137,139-146 1s97 d1s97c2 C:1-9,105-112,117-137,139-146 2au0 d2au0b2 B:1001-1009,1105-1112,1117-1137,1139-1146 1s97 d1s97b2 B:2-9,105-111,117-137,139-146 2ago d2agoa2 A:1-9,105-112,117-137,139-146 2jeg d2jega2 A:1-9,105-112,117-137,139-146 1s0m d1s0ma2 A:1-9,105-112,117-137,139-146 2uvu d2uvua2 A:1-9,105-112,117-137,139-146 2asj d2asja2 A:1-9,105-112,117-137,139-146 2uvv d2uvva2 A:2-9,105-111,117-137,139-146 2j6s d2j6sa2 A:2-9,105-111,117-137,139-146 1s9f d1s9fa2 A:1-9,105-112,117-137,139-146 1s9f d1s9fc2 C:1-9,105-112,117-137,139-146 2bqr d2bqra2 A:1-9,105-112,117-137,139-146 1s97 d1s97d2 D:1-9,105-112,117-137,139-146 2jej d2jeja2 A:1-9,105-112,117-137,139-146 2agp d2agpb2 B:1-9,105-112,117-137,139-146 2j6t d2j6ta2 A:2-9,105-111,117-137,139-146 2va2 d2va2b2 B:1-9,105-112,117-137,139-146 2c22 d2c22a2 A:1-9,105-112,117-137,139-146 1tau d1taua4 A:603-612,785-793,792-810,818-825 2c2e d2c2ea2 A:1-9,105-112,117-137,139-146 2r8g d2r8ga2 A:1-9,105-112,117-137,139-146 2jef d2jefa2 A:1-9,105-112,117-137,139-146 2bq3 d2bq3a2 A:1-9,105-112,117-137,139-146 1t94 d1t94b2 B:102-109,198-204,289-306,308-315 2ktq d2ktqa2 A:603-612,785-793,792-810,818-825 1taq d1taqa4 A:603-612,785-793,792-810,818-825 2asl d2asla2 A:1-9,105-112,117-137,139-146 2j6u d2j6ua2 A:4-12,108-115,120-140,142-149 1ktq d1ktqa2 A:603-612,785-793,792-810,818-825 1qsy d1qsya2 A:603-612,785-793,792-810,818-825 1t94 d1t94a2 A:102-109,198-204,289-306,308-315 2uvr d2uvra2 A:1-9,105-112,117-137,139-146 3ktq d3ktqa2 A:603-612,785-793,792-810,818-825 2v9w d2v9wb2 B:1-9,105-112,117-137,139-146 4ktq d4ktqa2 A:603-612,785-793,792-810,818-825 3bq1 d3bq1a2 A:2-9,105-111,118-138,140-147 2asj d2asjb2 B:1002-1009,1105-1111,1117-1137,1139-1146 2c2r d2c2ra2 A:2-9,105-111,117-137,139-146 3bq2 d3bq2a2 A:1-9,105-112,118-138,140-147 1xhx d1xhxa2 A:281-294,323-329,329-341,344-354 2c2d d2c2da2 A:2-9,105-111,117-137,139-146 1im4 d1im4a_ A:1-9,105-112,118-138,140-148 1tgo d1tgoa2 A:398-406,542-548,552-571,576-584 1k1s d1k1sa2 A:2-9,105-111,118-138,140-147 2r8h d2r8ha2 A:1-9,105-112,117-137,139-146 1tv6 d1tv6b1 B:104-111,185-192,194-213,217-236 1k1q d1k1qb2 B:2-9,105-111,118-138,140-147 1rt3 d1rt3b_ B:104-111,185-192,194-213,231-236 1rev d1revb_ B:104-111,185-192,194-213,231-236 2vwk d2vwka2 A:398-406,542-548,552-571,576-584 2vg5 d2vg5b1 B:1104-1111,1185-1192,1194-1213,1231-1236 2vwj d2vwja2 A:398-405,542-548,552-572,577-584 3drr d3drrb1 B:104-111,185-192,194-213,231-236 2v9w d2v9wa2 A:1-9,105-112,117-137,139-146 1vrt d1vrtb_ B:104-111,185-192,194-213,231-236 3c6t d3c6tb1 B:104-111,185-192,194-213,231-236 3drs d3drsb1 B:104-111,185-192,194-213,231-236 3c6u d3c6ub1 B:104-111,185-192,194-213,231-236 2rf2 d2rf2b1 B:104-111,185-192,194-213,231-236 2zd1 d2zd1b1 B:104-111,185-192,194-213,231-236 1qe1 d1qe1b_ B:104-111,185-192,194-213,231-236 1dlo d1dlob_ B:104-111,185-192,194-213,231-236 2pyj d2pyja2 A:282-291,323-329,329-340,343-354 3drp d3drpb1 B:104-111,185-192,194-213,231-236 1vru d1vrub_ B:104-111,185-192,194-213,231-236 2be2 d2be2b1 B:104-111,185-192,194-214,231-236 2pyj d2pyjb2 B:282-291,323-329,329-340,343-354 3dlk d3dlkb1 B:104-111,185-192,194-213,231-236 1eet d1eetb_ B:1104-1111,1185-1192,1194-1213,1232-1236 2rki d2rkib1 B:104-111,185-192,194-213,232-236 2ze2 d2ze2b1 B:104-111,185-192,194-213,230-236 1qqc d1qqca2 A:398-406,542-548,552-572,576-584 2ban d2banb1 B:104-111,185-192,194-214,232-236 1hqu d1hqub_ B:104-111,185-192,194-214,231-236 1c0u d1c0ub_ B:104-111,185-192,194-213,232-236 2b6a d2b6ab1 B:104-111,185-192,194-213,232-236 1ikx d1ikxb_ B:1104-1111,1185-1192,1194-1213,1232-1236 3bgr d3bgrb1 B:104-111,185-192,194-213,231-236 1hqe d1hqeb_ B:104-111,185-192,195-213,231-236 2i5j d2i5jb1 B:104-111,185-192,194-214,232-236 1bgx d1bgxt4 T:605-612,785-791,796-812,818-825 1d5a d1d5aa2 A:398-407,542-548,552-572,575-584 1s9g d1s9gb_ B:104-111,185-192,194-213,232-236 2b5j d2b5jb1 B:104-111,185-192,194-214,232-236 1iky d1ikyb_ B:1104-1111,1185-1192,1194-1213,1232-1236 1ikv d1ikvb_ B:1104-1111,1185-1192,1194-1213,1232-1236 1ikw d1ikwb_ B:1104-1111,1185-1192,1194-1213,1232-1236 1hpz d1hpzb_ B:104-111,185-192,194-214,231-236 1hnv d1hnvb_ B:104-111,185-192,194-214,232-236 1suq d1suqb_ B:104-111,185-192,194-213,232-236 1wns d1wnsa2 A:398-406,542-548,552-572,576-584 1rt1 d1rt1b1 B:104-111,185-192,194-213,232-236 2vg7 d2vg7b1 B:1104-1111,1185-1192,1194-1212,1232-1236 1dtq d1dtqb_ B:104-111,185-192,194-213,232-236 1rt7 d1rt7b1 B:104-111,185-192,194-213,232-236 1s9e d1s9eb_ B:104-111,185-192,194-213,232-236 1c1c d1c1cb_ B:104-111,185-192,194-213,232-236 1wn7 d1wn7a2 A:398-406,542-548,552-572,576-584 2r8k d2r8kb2 B:25-32,155-161,232-257,259-266 1bqm d1bqmb_ B:104-111,185-192,194-213,232-236 2r8k d2r8ka2 A:25-32,155-161,232-257,259-266 1jlf d1jlfb_ B:104-111,185-192,194-212,232-236 1lwe d1lweb_ B:104-111,185-192,194-213,232-236 2r8j d2r8jb2 B:25-32,155-161,232-257,259-266 1uwb d1uwbb_ B:104-111,185-192,194-214,232-236 2fln d2flna2 A:29-36,126-132,167-192,194-201 2r8j d2r8ja2 A:25-32,155-161,232-257,259-266 1rt2 d1rt2b_ B:104-111,185-192,194-211,232-236 2fll d2flla2 A:29-36,126-132,167-192,194-201 1zet d1zeta2 A:29-36,126-132,167-192,194-201 2alz d2alza2 A:29-36,126-132,167-192,194-201 2dpi d2dpia2 A:29-36,126-132,167-192,194-201 2dpj d2dpja2 A:29-36,126-132,167-192,194-201 1bqn d1bqnb_ B:104-112,185-192,194-214,232-236 1t3n d1t3nb2 B:449-456,546-552,587-612,614-621 1t3n d1t3na2 A:29-36,126-132,167-192,194-201 2flp d2flpa2 A:29-36,126-132,167-192,194-201 1jih d1jiha2 A:25-31,155-161,232-257,260-266 1jih d1jihb2 B:25-31,155-161,232-257,260-266 1dpi d1dpia2 A:698-707,882-890,890-910,915-922 1kln d1klna2 A:698-707,882-890,890-910,915-922 2vg6 d2vg6b1 B:1104-1111,1185-1192,1194-1213,1232-1237 2kzz d2kzza2 A:698-707,882-890,890-910,915-922 1krp d1krpa2 A:698-707,882-890,890-910,915-922 2ex3 d2ex3a2 A:282-290,323-329,329-341,344-354 1d8y d1d8ya2 A:698-707,882-890,890-910,915-922 1ksp d1kspa2 A:698-707,882-890,890-910,915-922 1kfs d1kfsa2 A:698-707,882-890,890-910,915-922 1d9d d1d9da2 A:698-707,882-890,890-910,915-922 1kfd d1kfda2 A:698-707,882-890,890-910,915-922 1xhz d1xhza2 A:240-251,458-464,468-476,482-490 2pyj d2pyja2 A:243-251,458-464,468-475,482-490 1qsl d1qsla2 A:698-707,882-890,890-910,915-922 2kzm d2kzma2 A:698-707,882-890,890-910,915-922 1xi1 d1xi1a2 A:244-251,458-464,468-475,482-490 2ex3 d2ex3i2 I:282-290,323-329,329-341,344-354 2kfn d2kfna2 A:698-707,882-890,890-910,915-922 2kfz d2kfza2 A:698-707,882-890,890-910,915-922 1d9f d1d9fa2 A:698-707,882-890,890-910,915-922 2pyj d2pyjb2 B:243-251,458-464,468-475,482-490 1lv5 d1lv5b2 B:646-655,830-838,840-857,863-870 2hvh d2hvha2 A:646-655,830-838,840-857,863-870 2py5 d2py5b2 B:282-289,323-329,329-340,344-354 2hvi d2hvia2 A:646-655,830-838,840-857,863-870 2hhw d2hhwd2 D:646-655,830-838,840-857,863-870 1lv5 d1lv5a2 A:646-655,830-838,840-857,863-870 2pzs d2pzsa2 A:240-251,458-464,468-475,482-490 1xwl d1xwla2 A:646-655,830-838,840-857,863-870 1q8i d1q8ia2 A:413-421,547-553,558-585,591-600 3cq8 d3cq8a2 A:405-413,623-629,643-659,682-691 2hvi d2hvid2 D:646-655,830-838,840-857,863-870 2hhw d2hhwa2 A:646-655,830-838,840-857,863-870 1n1h d1n1ha_ A:578-587,734-742,749-767,770-775 1njz d1njza2 A:646-655,830-838,840-857,863-870 2hvh d2hvhd2 D:646-655,830-838,840-857,863-870 2py5 d2py5b2 B:243-251,458-464,468-475,482-490 1sl0 d1sl0a2 A:469-477,654-661,662-685,691-698 1nk6 d1nk6a2 A:646-655,830-838,840-857,863-870 1sl0 d1sl0c2 C:469-477,654-661,662-685,691-698 2py5 d2py5a2 A:243-251,458-464,468-475,482-490 2hw3 d2hw3a2 A:646-655,830-838,840-857,863-870 2pzs d2pzsc2 C:240-251,458-464,468-475,482-490 2pyl d2pyla2 A:241-251,458-464,468-475,482-490 1n38 d1n38a_ A:578-587,734-742,749-767,770-775 1nk9 d1nk9a2 A:646-655,830-838,840-857,863-870 2ex3 d2ex3c2 C:240-251,458-464,468-475,482-490 1l3v d1l3va2 A:646-655,830-838,840-857,863-870 1njx d1njxa2 A:646-655,830-838,840-857,863-870 2p5o d2p5od2 D:405-413,623-629,643-658,682-691 1u47 d1u47a2 A:646-655,830-838,840-857,863-870 2p5o d2p5oa2 A:405-413,623-629,643-659,682-691 2hht d2hhta2 A:646-655,830-838,840-857,863-870 2ex3 d2ex3a2 A:240-251,458-464,468-475,482-490 1nk7 d1nk7a2 A:646-655,830-838,840-857,863-870 1njy d1njya2 A:646-655,830-838,840-857,863-870 1u49 d1u49a2 A:646-655,830-838,840-857,863-870 1nk4 d1nk4a2 A:646-655,830-838,840-857,863-870 2hhs d2hhsa2 A:646-655,830-838,840-857,863-870 1nkb d1nkba2 A:646-655,830-838,840-857,863-870 1x9s d1x9sa2 A:469-477,654-661,662-685,691-698 1njw d1njwa2 A:646-655,830-838,840-857,863-870 1u48 d1u48a2 A:646-655,830-838,840-857,863-870 1l3t d1l3ta2 A:646-655,830-838,840-857,863-870 1nkc d1nkca2 A:646-655,830-838,840-857,863-870 1q9x d1q9xb2 B:405-413,623-629,643-659,682-691 1nke d1nkea2 A:646-655,830-838,840-857,863-870 1l5u d1l5ua2 A:646-655,830-838,840-857,863-870 2pzs d2pzsb2 B:243-251,458-464,468-475,482-490 1t7p d1t7pa2 A:469-477,654-661,662-685,691-698 2p5o d2p5ob2 B:405-413,623-629,643-659,682-691 1nk0 d1nk0a2 A:646-655,830-838,840-857,863-870 1nk8 d1nk8a2 A:646-655,830-838,840-857,863-870 2hhq d2hhqa2 A:646-655,830-838,840-857,863-870 2hhu d2hhua2 A:646-655,830-838,840-857,863-870 1ua1 d1ua1a2 A:646-655,830-838,840-857,863-870 3bdp d3bdpa2 A:646-655,830-838,840-857,863-870 1ua0 d1ua0a2 A:646-655,830-838,840-857,863-870 2ex3 d2ex3k2 K:240-251,458-464,468-475,482-490 1tk5 d1tk5a2 A:469-477,654-661,662-685,691-698 1sks d1sksa2 A:469-477,654-661,662-685,691-698 1waj d1waja2 A:405-413,623-629,643-658,682-691 1xhx d1xhxa2 A:240-251,458-464,468-475,482-490 1s5j d1s5ja2 A:508-516,657-663,665-681,683-692 1l3u d1l3ua2 A:646-655,830-838,840-857,863-870 2ex3 d2ex3g2 G:240-251,458-464,468-475,482-490 1n35 d1n35a_ A:578-587,734-742,749-767,770-775 1xc9 d1xc9a2 A:646-655,830-838,840-857,863-870 2bdp d2bdpa2 A:646-655,830-838,840-857,863-870 2hhv d2hhva2 A:646-655,830-838,840-857,863-870 2ex3 d2ex3i2 I:240-251,458-464,468-475,482-490 2ex3 d2ex3e2 E:240-251,458-464,468-475,482-490 1x9m d1x9ma2 A:469-477,654-661,662-685,691-698 1sl1 d1sl1a2 A:469-477,654-661,662-685,691-698 4bdp d4bdpa2 A:646-655,830-838,840-857,863-870 1l3s d1l3sa2 A:646-655,830-838,840-857,863-870 1zyq d1zyqa2 A:469-477,654-661,662-685,691-698 1nk5 d1nk5a2 A:646-655,830-838,840-857,863-870 1tk0 d1tk0a2 A:469-477,654-661,662-685,691-698 1u45 d1u45a2 A:646-655,830-838,840-857,863-870 1sl2 d1sl2a2 A:469-477,654-661,662-685,691-698 1t8e d1t8ea2 A:469-477,654-661,662-685,691-698 1skw d1skwa2 A:469-477,654-661,662-685,691-698 1xr5 d1xr5a_ A:227-235,327-334,338-350,352-356 1tk8 d1tk8a2 A:469-477,654-661,662-685,691-698 1x9w d1x9wa2 A:469-477,654-661,662-685,691-698 2hhx d2hhxa2 A:646-655,830-838,840-857,863-870 1u4b d1u4ba2 A:646-655,830-838,840-857,863-870 1skr d1skra2 A:469-477,654-661,662-685,691-698 2dy4 d2dy4d2 D:405-413,623-629,643-658,682-691 1muk d1muka_ A:578-587,734-742,749-767,770-775 1tkd d1tkda2 A:469-477,654-661,662-685,691-698 1mwh d1mwha_ A:578-587,734-742,749-767,770-775 2atq d2atqa2 A:405-413,623-629,643-659,682-691 2py5 d2py5a2 A:282-289,323-329,329-341,344-354 1qss d1qssa2 A:603-612,785-793,792-812,818-825 5ktq d5ktqa2 A:603-612,785-793,792-812,818-825 1qtm d1qtma2 A:603-612,785-793,792-812,818-825 1jxe d1jxea2 A:603-612,785-793,792-812,818-825 2pzs d2pzsc2 C:282-289,323-329,329-341,344-354 2pzs d2pzsb2 B:282-289,323-329,329-341,344-354 1xi1 d1xi1a2 A:282-289,323-329,329-341,344-354 2pzs d2pzsa2 A:282-289,323-329,329-341,344-354 2ex3 d2ex3g2 G:282-289,323-329,329-341,344-354 2pyl d2pyla2 A:282-289,323-329,329-341,344-354 1khv d1khva_ A:245-252,354-360,367-379,381-385 2oyq d2oyqb2 B:406-413,623-629,643-659,682-690 1khv d1khvb_ B:245-252,354-360,367-379,381-385 1xhz d1xhza2 A:282-289,323-329,329-341,344-354 1ih7 d1ih7a2 A:406-413,623-629,643-659,682-690 1khw d1khwb_ B:245-252,354-360,367-379,381-385 1hi1 d1hi1b_ B:318-326,453-460,462-478,487-491 1hi1 d1hi1c_ C:318-326,453-460,462-478,487-491 1hi1 d1hi1a_ A:318-326,453-460,462-478,487-491 1uvk d1uvke_ E:318-326,453-460,462-478,487-491 1uvk d1uvkc_ C:318-326,453-460,462-478,487-491 1uvk d1uvka_ A:318-326,453-460,462-478,487-491 2dy4 d2dy4b2 B:406-413,623-629,643-658,682-690 2oyq d2oyqc2 C:406-413,623-629,643-658,682-690 1khw d1khwa_ A:245-252,354-360,367-379,381-385 1waf d1wafb2 B:405-413,623-629,643-659,682-691 1uvi d1uvia_ A:318-326,453-460,462-478,487-491 1uvm d1uvmc_ C:318-326,453-460,462-478,487-491 1uvi d1uvic_ C:318-326,453-460,462-478,487-491 2ex3 d2ex3e2 E:282-289,323-329,329-341,344-354 2ex3 d2ex3c2 C:282-289,323-329,329-341,344-354 1hi8 d1hi8a_ A:318-326,453-460,462-478,487-491 1uvm d1uvma_ A:318-326,453-460,462-478,487-491 1hi8 d1hi8b_ B:318-326,453-460,462-478,487-491 2ozs d2ozsa2 A:406-413,623-629,643-659,682-690 1uvj d1uvjc_ C:318-326,453-460,462-478,487-491 1uvl d1uvlc_ C:318-326,453-460,462-478,487-491 1uvl d1uvle_ E:318-326,453-460,462-478,487-491 1uvl d1uvla_ A:318-326,453-460,462-478,487-491 2p5o d2p5oc2 C:406-413,623-629,643-658,682-690 1hht d1hhtp_ P:318-326,453-460,462-478,487-491 1hht d1hhtr_ R:318-326,453-460,462-478,487-491 1hht d1hhtq_ Q:318-326,453-460,462-478,487-491 1q9x d1q9xd2 D:406-413,623-629,643-659,682-690 1uvi d1uvib_ B:318-326,453-460,462-478,487-491 2oyq d2oyqa2 A:406-413,623-629,643-659,682-690 2p5g d2p5ga2 A:406-413,623-629,643-659,682-690 1hhs d1hhsc_ C:318-326,453-460,462-478,487-491 1hhs d1hhsa_ A:318-326,453-460,462-478,487-491 1hhs d1hhsb_ B:318-326,453-460,462-478,487-491 1uvj d1uvja_ A:318-326,453-460,462-478,487-491 1q9x d1q9xa2 A:406-413,623-629,643-659,682-690 1uvm d1uvmb_ B:318-326,453-460,462-478,487-491 2dy4 d2dy4c2 C:406-413,623-629,643-658,682-690 2p5g d2p5gc2 C:406-413,623-629,643-659,682-690 1ig9 d1ig9a2 A:406-413,623-629,643-659,682-690 2pzs d2pzsd2 D:282-289,323-329,329-341,344-354 1q9x d1q9xc2 C:406-413,623-629,643-659,682-690 1uvj d1uvjb_ B:318-326,453-460,462-478,487-491 2p5g d2p5gb2 B:406-413,623-629,643-659,682-690 1q9y d1q9ya2 A:409-416,626-632,646-662,685-693 2ex3 d2ex3k2 K:282-289,323-329,329-341,344-354 2dy4 d2dy4a2 A:406-413,623-629,643-659,682-690 1clq d1clqa2 A:406-413,623-629,643-659,682-690 2p5g d2p5gd2 D:406-413,623-629,643-659,682-690 1waf d1wafa2 A:406-413,623-629,643-658,682-690 2ozm d2ozma2 A:406-413,623-629,643-659,682-690 1hi0 d1hi0r_ R:317-326,453-460,462-478,487-491 1hi0 d1hi0p_ P:317-326,453-460,462-478,487-491 1hi0 d1hi0q_ Q:317-326,453-460,462-478,487-491 2e9z d2e9za1 A:234-242,338-345,349-361,363-367 2oyq d2oyqd2 D:406-413,623-629,643-675,682-690 1wne d1wnea_ A:234-242,338-345,349-361,363-367 1u09 d1u09a_ A:234-242,338-345,349-361,363-367 2d7s d2d7sa1 A:234-242,338-345,349-361,363-367 2e9r d2e9rx1 X:234-242,338-345,349-361,363-367 2ec0 d2ec0d1 D:234-242,338-345,349-361,363-367 2ec0 d2ec0a1 A:234-242,338-345,349-361,363-367 2f8e d2f8ex1 X:234-242,338-345,349-361,363-367 2e9t d2e9td1 D:234-242,338-345,349-361,363-367 2e9t d2e9ta1 A:234-242,338-345,349-361,363-367 2dy4 d2dy4b2 B:406-413,623-629,657-675,682-690 2oyq d2oyqc2 C:406-413,623-629,657-675,682-690 2p5o d2p5oc2 C:406-413,623-629,657-675,682-690 2dy4 d2dy4c2 C:406-413,623-629,657-675,682-690 2p5g d2p5gc2 C:406-413,623-629,658-675,682-690 2p5g d2p5gb2 B:406-413,623-629,658-675,682-690 1q9x d1q9xc2 C:406-413,623-629,658-675,682-690 2p5g d2p5ga2 A:406-413,623-629,658-675,682-690 1ih7 d1ih7a2 A:406-413,623-629,658-675,682-690 1q9x d1q9xd2 D:406-413,623-629,658-675,682-690 1q9x d1q9xa2 A:406-413,623-629,658-675,682-690 1ig9 d1ig9a2 A:406-413,623-629,658-675,682-690 1waf d1wafa2 A:406-413,623-629,657-675,682-690 1q9y d1q9ya2 A:409-416,626-632,661-678,685-693 2oyq d2oyqb2 B:406-413,623-629,658-675,682-690 2oyq d2oyqa2 A:406-413,623-629,658-675,682-690 2ozs d2ozsa2 A:406-413,623-629,658-675,682-690 1clq d1clqa2 A:406-413,623-629,658-675,682-690 2ozm d2ozma2 A:406-413,623-629,658-675,682-690 2dy4 d2dy4a2 A:406-413,623-629,658-675,682-690 1n38 d1n38a_ A:403-409,410-415,594-611,624-631 1n1h d1n1ha_ A:403-409,410-415,594-611,624-631 1n35 d1n35a_ A:403-409,410-415,594-611,624-631 2p5g d2p5gd2 D:406-413,623-629,658-675,682-690 2pzs d2pzsd2 D:289-294,323-329,329-341,344-354 1muk d1muka_ A:403-409,410-415,594-615,624-631 1mwh d1mwha_ A:403-409,410-415,594-615,624-631 1q9x d1q9xb2 B:405-413,623-629,658-675,682-691 2atq d2atqa2 A:405-413,623-629,658-675,682-691 2dy4 d2dy4d2 D:405-413,623-629,657-675,682-691 3cq8 d3cq8a2 A:405-413,623-629,658-675,682-691 2pzs d2pzsc2 C:289-294,323-329,329-341,344-354 1waj d1waja2 A:405-413,623-629,657-675,682-691 2p5o d2p5ob2 B:405-413,623-629,658-675,682-691 2ex3 d2ex3e2 E:289-294,323-329,329-341,344-354 2ex3 d2ex3k2 K:289-294,323-329,329-341,344-354 2ex3 d2ex3g2 G:289-294,323-329,329-341,344-354 2pzs d2pzsa2 A:289-294,323-329,329-341,344-354 2p5o d2p5oa2 A:405-413,623-629,658-675,682-691 1xi1 d1xi1a2 A:289-294,323-329,329-341,344-354 2p5o d2p5od2 D:405-413,623-629,657-675,682-691 2ex3 d2ex3c2 C:289-294,323-329,329-341,344-354 1xhz d1xhza2 A:289-294,323-329,329-341,344-354 2py5 d2py5a2 A:289-294,323-329,329-341,344-354 2pzs d2pzsb2 B:289-294,323-329,329-341,344-354 2pyl d2pyla2 A:289-294,323-329,329-341,344-354 2py5 d2py5b2 B:289-294,323-329,329-340,344-354 1waf d1wafb2 B:405-413,623-629,658-675,682-691 22. c.97.1 Cytidine deaminase-like contains extra C-terminal strand 5, order 21345 ! Cytidine deaminase-like core: alpha-beta(2)-(alpha-beta)2; 3 layers (a/b/a); mixed beta-sheet of 4 strands, order 2134; strand 1 is antiparallel to the rest 1zab d1zabb1 B:38-45,47-53,65-78,81-89 1zab d1zabd1 D:38-45,47-53,65-78,81-89 1zab d1zaba1 A:38-45,47-53,65-78,81-89 2fr6 d2fr6b1 B:38-45,47-53,65-78,81-89 2fr6 d2fr6a1 A:38-45,47-53,65-78,81-89 2fr6 d2fr6d1 D:38-45,47-53,65-78,81-89 2fr5 d2fr5d1 D:38-45,47-53,65-78,81-89 1wn5 d1wn5c1 C:28-36,38-45,54-67,70-79 1wn5 d1wn5a1 A:28-36,38-45,54-67,70-79 1wn5 d1wn5d1 D:28-36,38-45,54-67,70-79 2z3g d2z3gc1 C:28-36,38-45,54-67,70-79 2z3h d2z3hc1 C:28-36,38-45,54-67,70-79 1wn6 d1wn6a1 A:28-36,38-45,54-67,70-79 1wwr d1wwrb1 B:25-32,33-41,52-66,72-79 2b3j d2b3jc1 C:26-33,34-42,53-67,74-80 1wn6 d1wn6b1 B:28-36,38-45,54-67,70-79 2z3h d2z3hd1 D:28-36,38-45,54-67,70-79 1wn5 d1wn5b1 B:28-36,38-45,54-67,70-79 2z3g d2z3gd1 D:28-36,38-45,54-67,70-79 2z3h d2z3ha1 A:28-36,38-45,54-67,70-79 1ctt d1ctta2 A:211-218,220-226,238-251,256-265 2z3g d2z3ga1 A:28-36,38-45,54-67,70-79 2d30 d2d30b1 B:26-33,35-41,53-66,69-78 2d30 d2d30a1 A:26-33,35-41,53-66,69-78 1zab d1zabc1 C:38-45,47-53,65-78,81-89 1aln d1alna2 A:211-218,220-226,238-251,256-265 1jtk d1jtka_ A:26-33,35-41,53-66,69-78 1jtk d1jtkb_ B:26-33,35-41,53-66,69-78 1af2 d1af2a2 A:211-218,220-226,238-251,256-265 2z3h d2z3hb1 B:28-36,38-45,54-67,70-79 2b3j d2b3jd1 D:26-33,34-42,53-67,74-80 1uwz d1uwza_ A:26-33,35-41,53-66,69-78 2z3g d2z3gb1 B:28-36,38-45,54-67,70-79 1ctu d1ctua2 A:211-218,220-226,238-251,256-265 1uwz d1uwzb_ B:26-33,35-41,53-66,69-78 1ux0 d1ux0a_ A:26-33,35-41,53-66,69-78 1ux0 d1ux0b_ B:26-33,35-41,53-66,69-78 2b3j d2b3ja1 A:26-33,34-42,53-67,74-80 1ux1 d1ux1c_ C:26-33,35-41,53-66,69-78 1ux1 d1ux1a_ A:26-33,35-41,53-66,69-78 2b3j d2b3jb1 B:26-33,34-42,53-67,74-80 1ux1 d1ux1b_ B:26-33,35-41,53-66,69-78 1tiy d1tiya_ A:26-33,34-42,53-67,74-80 1ux1 d1ux1d_ D:26-33,35-41,53-66,69-78 1r5t d1r5tb_ B:33-41,43-49,61-74,78-87 1wkq d1wkqb_ B:26-33,34-42,53-67,74-80 1r5t d1r5td_ D:33-41,43-49,61-74,78-87 2b3z d2b3zc2 C:26-33,34-42,49-59,63-71 2hxv d2hxva2 A:26-33,34-42,49-62,68-74 1wkq d1wkqa_ A:26-33,34-42,53-67,74-80 2d5n d2d5nb2 B:26-33,34-42,49-59,65-71 1mq0 d1mq0a_ A:37-45,47-53,65-78,81-90 2fr5 d2fr5a1 A:37-45,47-53,65-78,81-90 1r5t d1r5ta_ A:33-41,43-49,61-74,78-87 1mq0 d1mq0b_ B:37-45,47-53,65-78,81-90 2d5n d2d5nc2 C:26-33,34-42,49-59,63-71 2fr5 d2fr5b1 B:37-45,47-53,65-78,81-90 1wwr d1wwra1 A:25-32,33-41,52-66,73-79 1r5t d1r5tc_ C:33-41,43-49,61-74,78-87 2a8n d2a8nb1 B:26-33,34-42,53-67,74-80 2d5n d2d5nd2 D:26-33,34-42,49-59,65-71 1wwr d1wwrc1 C:25-32,33-41,52-66,73-79 2fr5 d2fr5c1 C:37-45,47-53,65-78,81-90 1tiy d1tiyb_ B:26-33,34-42,53-67,74-80 1wwr d1wwrd1 D:25-32,33-41,52-66,73-79 1vk9 d1vk9a_ A:19-24,26-32,34-47,49-58 2b3z d2b3zd2 D:26-33,34-42,49-59,65-71 2d5n d2d5na2 A:26-33,34-42,49-59,65-71 2a8n d2a8na1 A:26-33,34-42,53-67,74-80 2b3z d2b3zb2 B:26-33,34-42,49-59,65-71 2b3z d2b3za2 A:26-33,34-42,49-59,65-71 1vq2 d1vq2a_ A:24-31,32-40,104-117,123-129 2g84 d2g84a1 A:48-56,57-66,77-91,102-109 2fr6 d2fr6c1 C:37-45,47-53,65-78,81-90 1zcz d1zczb2 B:217-224,225-233,235-248,253-259 1z3a d1z3ab1 B:41-48,49-57,68-82,89-95 1z3a d1z3aa1 A:41-48,49-57,68-82,89-95 1p6o d1p6oa_ A:33-41,42-51,62-72,81-88 1rb7 d1rb7a_ A:33-41,42-51,62-72,81-88 1uaq d1uaqb_ B:33-41,42-51,62-72,81-88 1uaq d1uaqa_ A:33-41,42-51,62-72,81-88 1ysd d1ysdb1 B:233-241,242-251,262-272,281-288 1ox7 d1ox7a_ A:33-41,42-51,62-72,81-88 1ox7 d1ox7b_ B:233-241,242-251,262-272,281-288 1p6o d1p6ob_ B:233-241,242-251,262-272,281-288 1ysb d1ysba1 A:33-41,42-51,62-72,81-88 1ysb d1ysbb1 B:233-241,242-251,262-272,281-288 1rb7 d1rb7b_ B:33-41,42-51,62-72,81-88 1ysd d1ysda1 A:33-41,42-51,62-72,81-88 1pl0 d1pl0b2 B:260-267,268-276,297-311,316-323 1ctu d1ctua1 A:74-80,82-88,102-115,118-125 1pl0 d1pl0d2 D:260-267,268-276,297-311,316-323 1aln d1alna1 A:74-80,82-88,102-115,118-125 1af2 d1af2a1 A:74-80,82-88,102-115,118-125 1ctt d1ctta1 A:74-80,82-88,102-115,118-125 1thz d1thzb2 B:261-268,269-277,298-312,317-324 2pw9 d2pw9d1 D:153-161,162-171,172-187,193-198 1m9n d1m9nb2 B:261-268,269-277,298-312,317-324 1m9n d1m9na2 A:261-268,269-277,298-312,317-324 1g8m d1g8ma2 A:261-268,269-277,298-312,317-324 1zcz d1zcza2 A:217-224,225-233,235-248,254-259 2pw9 d2pw9a1 A:153-161,162-171,172-187,193-198 1g8m d1g8mb2 B:261-268,269-277,298-312,317-324 2pw9 d2pw9c1 C:153-161,162-171,172-187,193-198 1pkx d1pkxb2 B:260-267,268-276,297-311,316-323 2pw9 d2pw9b1 B:153-161,162-171,172-187,193-198 1thz d1thza2 A:261-268,269-277,298-312,317-324 1pkx d1pkxd2 D:260-267,268-276,297-311,316-323 1pkx d1pkxa2 A:260-267,268-276,297-311,316-323 1oz0 d1oz0a2 A:261-268,269-277,298-312,317-324 1p4r d1p4ra2 A:260-267,268-276,297-311,316-323 1m9n d1m9na2 A:432-439,440-448,451-471,535-540 1m9n d1m9nb2 B:432-439,440-448,451-471,535-540 1g8m d1g8ma2 A:432-439,440-448,451-471,535-540 1pkx d1pkxc2 C:260-267,268-276,297-311,316-323 1pl0 d1pl0a2 A:431-438,439-447,450-470,534-539 1oz0 d1oz0b2 B:432-439,440-448,451-471,535-540 1pl0 d1pl0c2 C:431-438,439-447,450-470,534-539 1pkx d1pkxa2 A:431-438,439-447,450-470,534-539 1g8m d1g8mb2 B:432-439,440-448,451-471,535-540 1pkx d1pkxd2 D:431-438,439-447,450-470,534-539 1pkx d1pkxc2 C:431-438,439-447,450-470,534-539 1pkx d1pkxb2 B:431-438,439-447,450-470,534-539 1thz d1thza2 A:432-439,440-448,451-471,535-540 1p4r d1p4rb2 B:431-438,439-447,450-470,534-539 1thz d1thzb2 B:432-439,440-448,451-471,535-540 1pl0 d1pl0d2 D:431-438,439-447,450-470,534-539 1oz0 d1oz0a2 A:432-439,440-448,451-471,535-540 1pl0 d1pl0a2 A:260-267,268-276,297-311,317-323 1zcz d1zcza2 A:356-363,364-372,375-388,394-399 1pl0 d1pl0b2 B:431-438,439-447,450-470,534-539 1p4r d1p4rb2 B:260-267,268-276,297-311,317-323 1p4r d1p4ra2 A:431-438,439-447,450-470,534-539 1zcz d1zczb2 B:356-363,364-372,375-388,394-399 1pl0 d1pl0c2 C:260-267,268-276,297-311,317-322 1oz0 d1oz0b2 B:261-268,269-277,298-312,318-323 23. d.58.10 Acylphosphatase/BLUF domain-like Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1yrx d1yrxa1 A:16-26,59-68,68-82,84-96 1x0p d1x0pc1 C:2003-2013,2046-2055,2055-2069,2071-2083 2byc d2byca1 A:4-14,47-56,56-70,72-84 2byc d2bycb1 B:504-514,547-556,556-570,572-584 1x0p d1x0ph1 H:7003-7013,7046-7055,7055-7070,7071-7083 1ulr d1ulra_ A:2-11,40-48,49-63,67-78 2bun d2buna1 A:16-26,59-68,68-82,84-96 1x0p d1x0pj1 J:9003-9013,9046-9055,9055-9070,9071-9083 1x0p d1x0pa1 A:103-113,146-155,155-170,171-183 1x0p d1x0pi1 I:8003-8013,8046-8055,8055-8070,8071-8083 1x0p d1x0pg1 G:6003-6013,6046-6055,6055-6070,6071-6083 1x0p d1x0pd1 D:3003-3013,3046-3055,3055-3070,3071-3083 1x0p d1x0pe1 E:4003-4013,4046-4055,4055-4070,4071-4083 2acy d2acya_ A:6-16,45-54,54-69,74-86 1x0p d1x0pf1 F:5003-5013,5046-5055,5055-5070,5071-5083 1x0p d1x0pb1 B:1003-1013,1046-1055,1055-1070,1071-1083 1w2i d1w2ia_ A:3-13,42-51,51-65,70-79 1v3z d1v3zb_ B:3-13,42-51,51-65,70-79 1v3z d1v3za_ A:3-13,42-51,51-65,69-79 1yrx d1yrxb1 B:15-26,59-68,68-82,84-97 1yrx d1yrxc1 C:15-26,59-68,68-82,84-97 1urr d1urra_ A:6-16,45-54,54-68,73-86 1w2i d1w2ib_ B:3-13,42-51,51-65,69-79 1aps d1apsa_ A:6-17,44-54,54-68,76-86 1gxu d1gxua_ A:4-16,44-51,53-65,70-83 1gxt d1gxta_ A:4-16,44-51,53-65,70-83 26. d.41.4 Ribosomal protein L16p/L10e alpha/beta-Hammerhead core: beta-BETA-alpha-beta-BETA-beta-alpha; contains a beta-hammerhead motif similar to that in barrel-sandwich hybrids 1q86 d1q86j_ J:43-52,127-137,140-153,156-163 1q81 d1q81j_ J:43-52,127-137,140-153,155-163 1qvg d1qvgh_ H:43-52,127-137,140-153,155-163 1ffk d1ffkf_ F:43-52,116-127,130-144,146-153 1k9m d1k9mj_ J:43-52,127-137,140-154,155-163 1m90 d1m90j_ J:43-52,127-137,140-154,155-163 1k73 d1k73j_ J:43-52,127-137,140-154,155-163 1m1k d1m1kj_ J:43-52,127-137,140-154,155-163 1n8r d1n8rj_ J:43-52,127-137,140-154,155-163 1nji d1njij_ J:43-52,127-137,140-154,155-163 1kc8 d1kc8j_ J:43-52,127-137,140-154,155-163 1kqs d1kqsh_ H:43-52,127-137,140-154,155-163 1qvf d1qvfh_ H:43-52,127-137,140-154,156-163 1kd1 d1kd1j_ J:43-52,127-137,140-154,155-163 1q82 d1q82j_ J:43-52,127-137,140-154,155-163 1k8a d1k8aj_ J:43-52,127-137,140-154,156-163 1jj2 d1jj2h_ H:43-52,127-137,140-154,156-163 3ccj d3ccjh1 H:47-56,132-142,142-158,162-170 1q7y d1q7yj_ J:43-52,127-137,140-154,155-163 1vqm d1vqmh1 H:44-53,129-139,139-155,159-167 1vq4 d1vq4h1 H:44-53,129-139,139-155,159-167 3ccu d3ccuh1 H:47-56,132-142,142-158,162-170 1vqk d1vqkh1 H:44-53,129-139,139-155,159-167 1vq9 d1vq9h1 H:44-53,129-139,139-155,159-167 3cma d3cmah1 H:47-56,132-142,142-158,162-170 3ccm d3ccmh1 H:47-56,132-142,142-158,162-170 1vq6 d1vq6h1 H:44-53,129-139,139-155,159-167 3cpw d3cpwh1 H:44-53,129-139,139-155,159-167 1vs6 d1vs6m1 M:30-37,96-105,108-121,123-129 2qa4 d2qa4h1 H:44-53,129-139,139-157,159-167 3ccq d3ccqh1 H:47-56,132-142,145-161,162-170 2vhn d2vhnm1 M:29-36,96-105,108-121,123-129 1yjn d1yjnh1 H:47-56,132-142,143-160,162-170 2qex d2qexh1 H:44-53,129-139,139-158,159-168 2vhm d2vhmm1 M:30-36,96-104,108-121,123-129 3dll d3dllj1 J:32-38,101-108,111-126,129-135 2j01 d2j01q1 Q:31-38,98-108,110-126,127-133 2j03 d2j03q1 Q:31-38,98-108,110-126,127-133 1vqn d1vqnh1 H:44-53,129-139,139-158,159-167 3cc4 d3cc4h1 H:47-56,132-142,142-161,162-171 1vqo d1vqoh1 H:44-53,129-139,139-158,159-167 2otj d2otjh1 H:44-53,129-139,139-158,159-168 1yj9 d1yj9h1 H:47-56,132-142,142-161,162-171 1vqp d1vqph1 H:44-53,129-139,139-158,159-167 3cd6 d3cd6h1 H:47-56,132-142,142-161,162-171 1vq7 d1vq7h1 H:44-53,129-139,139-158,159-167 3ccs d3ccsh1 H:47-56,132-142,142-161,162-170 2pa2 d2pa2b1 B:48-56,131-140,144-160,161-169 3ccv d3ccvh1 H:47-56,132-142,142-161,162-170 1vq5 d1vq5h1 H:44-53,129-139,139-158,159-167 1vql d1vqlh1 H:44-53,129-139,139-158,159-167 1yhq d1yhqh1 H:47-56,132-142,142-161,162-171 1yi2 d1yi2h1 H:47-56,132-142,142-161,162-170 3cme d3cmeh1 H:47-56,132-142,142-161,162-170 1yit d1yith1 H:47-56,132-142,142-161,162-170 1yjw d1yjwh1 H:47-56,132-142,142-161,162-170 3ccr d3ccrh1 H:47-56,132-142,142-161,162-170 1s72 d1s72h_ H:44-53,129-139,139-158,159-167 2otl d2otlh1 H:44-53,129-139,139-158,159-167 3cc2 d3cc2h1 H:47-56,132-142,142-161,162-171 3ccl d3cclh1 H:47-56,132-142,142-161,162-170 2pa2 d2pa2a1 A:48-56,131-140,144-160,161-169 1yij d1yijh1 H:47-56,132-142,142-161,162-170 2aw4 d2aw4m1 M:30-37,96-105,108-121,124-129 3bbx d3bbxm1 M:30-37,96-105,108-121,124-129 2rdo d2rdom1 M:30-37,96-105,108-121,124-129 1vq8 d1vq8h1 H:44-53,129-139,139-158,159-167 3cc7 d3cc7h1 H:47-56,132-142,142-161,162-171 3cce d3cceh1 H:47-56,132-142,142-161,162-171 2j28 d2j28m1 M:29-37,96-105,108-117,123-130 2awb d2awbm1 M:29-37,96-105,108-117,123-130 2z4n d2z4nm1 M:30-37,98-107,109-124,126-133 2qoz d2qozm1 M:30-37,98-106,109-125,127-133 2qp1 d2qp1m1 M:30-37,98-106,109-125,127-133 2z4l d2z4lm1 M:30-37,98-107,109-124,127-133 2qao d2qaom1 M:30-37,98-106,109-124,126-133 2qov d2qovm1 M:30-37,98-106,109-125,127-133 3df4 d3df4m1 M:30-37,98-103,109-125,126-133 3df2 d3df2m1 M:30-37,98-103,109-125,126-133 2qox d2qoxm1 M:30-37,98-106,109-125,127-133 2qam d2qamm1 M:30-37,98-106,109-124,127-133 2i2t d2i2tm1 M:30-37,98-103,109-125,126-133 2i2v d2i2vm1 M:30-37,98-103,109-125,126-133 2hgu d2hgup1 P:32-38,101-105,109-126,128-133 2qba d2qbam1 M:30-37,98-103,109-125,127-133 1wki d1wkia_ A:31-38,99-107,110-125,127-134 2gyc d2gyck1 K:32-37,97-103,111-125,127-131 2qbi d2qbim1 M:30-37,98-103,109-125,127-133 2qbe d2qbem1 M:30-37,98-103,109-124,126-133 2qbg d2qbgm1 M:30-37,98-103,109-124,126-133 1y69 d1y69k1 K:33-39,103-107,111-127,128-134 2gya d2gyak1 K:31-37,97-106,111-125,127-131 2zjq d2zjqj1 J:32-39,100-104,111-126,128-135 3cf5 d3cf5j1 J:33-39,100-104,111-126,128-134 2hgq d2hgqp1 P:31-38,101-107,111-126,127-134 2zjr d2zjrj1 J:32-39,100-104,111-126,128-135 2zjp d2zjpj1 J:32-39,100-104,111-126,128-135 2qbk d2qbkm1 M:32-37,98-103,109-125,127-131 2qbc d2qbcm1 M:30-37,99-103,109-124,127-133 2hgj d2hgjp1 P:32-38,101-108,111-126,128-133 27. d.58.17 HMA, heavy metal-associated domain Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1fvq d1fvqa_ A:1-10,39-47,51-63,64-72 1k0v d1k0va_ A:1-9,39-47,52-65,66-72 1s6u d1s6ua_ A:2-10,40-48,53-65,67-75 1fd8 d1fd8a_ A:4-12,42-50,52-64,66-73 1fvs d1fvsa_ A:1-10,39-47,51-63,64-72 1s6o d1s6oa_ A:3-11,41-48,53-65,66-74 1fe4 d1fe4b_ B:2-9,37-44,47-59,61-68 1cc8 d1cc8a_ A:4-12,42-50,52-64,66-73 1fe4 d1fe4a_ A:2-9,37-44,47-59,61-68 2ggp d2ggpa1 A:4-12,42-50,52-64,66-73 1cc7 d1cc7a_ A:4-12,42-50,52-64,66-73 1fe0 d1fe0b_ B:2-9,37-44,47-59,61-67 1fee d1feea_ A:3-9,37-44,47-59,61-68 1fee d1feeb_ B:2-9,37-44,47-59,61-67 1tl5 d1tl5a_ A:2-9,37-44,47-59,61-68 2aw0 d2aw0a_ A:2-11,40-48,53-65,66-71 1aw0 d1aw0a_ A:1-11,40-49,53-65,66-72 1fes d1fesa_ A:3-12,42-50,52-64,66-73 1jww d1jwwa_ A:2-11,41-48,53-65,66-74 2ggp d2ggpb1 B:1-9,39-47,51-63,65-72 1mwy d1mwya_ A:3-11,41-49,52-64,66-72 1kqk d1kqka_ A:2-11,40-48,53-65,66-74 1fe0 d1fe0a_ A:2-9,37-44,47-59,61-66 1q8l d1q8la_ A:8-17,46-54,59-71,72-76 1tl4 d1tl4a_ A:2-9,37-44,47-59,61-65 1kvj d1kvja_ A:7-15,46-53,58-70,72-76 1kvi d1kvia_ A:7-15,46-53,58-70,72-76 1mwz d1mwza_ A:4-12,42-49,51-64,65-70 1cpz d1cpza_ A:1-8,38-45,50-62,63-68 1oq3 d1oq3a_ A:5-14,43-51,56-68,69-73 1opz d1opza_ A:5-14,43-51,56-68,69-73 1jk9 d1jk9b2 B:6-13,43-51,53-65,68-74 1p6t d1p6ta2 A:73-82,111-119,124-136,137-142 1jk9 d1jk9d2 D:6-13,43-51,53-65,68-74 1afj d1afja_ A:1-9,40-49,53-65,68-72 2hqi d2hqia_ A:1-10,40-49,53-65,67-72 1afi d1afia_ A:1-9,40-49,53-65,68-72 1oq6 d1oq6a_ A:5-14,43-51,56-68,69-73 28. d.59.1 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e core: beta-alpha-beta-alpha-beta; antiparallel beta-sheet: order 312; some similarity to the ferredoxin-like fold 1bxy d1bxya_ A:2-10,32-39,40-51,53-60 2j03 d2j0331 3:2-9,32-39,40-51,53-59 2j01 d2j0131 3:2-9,32-39,40-51,53-59 1bxy d1bxyb_ B:2-9,32-38,40-51,53-60 2b66 d2b6631 3:2-9,32-39,40-51,53-59 2b9p d2b9p31 3:2-9,32-39,40-51,53-59 2b9n d2b9n31 3:2-9,32-39,40-51,53-59 1yl3 d1yl3x1 X:2-9,33-39,40-51,53-59 2hgu d2hgu21 2:2-9,33-39,40-51,53-60 2i2v d2i2vz1 Z:2-9,33-39,40-51,53-58 2i2t d2i2tz1 Z:2-9,33-39,40-51,53-58 1yjn d1yjnw1 W:1-7,30-36,38-51,51-56 1yit d1yitw1 W:1-7,30-36,38-51,51-56 1kqs d1kqsv_ V:1-7,30-36,38-51,51-56 1q82 d1q82x_ X:1-7,30-36,38-51,51-56 1yjw d1yjww1 W:1-7,30-36,38-51,51-56 1kd1 d1kd1x_ X:1-7,30-36,38-51,51-56 1q86 d1q86x_ X:1-7,30-36,38-51,51-56 1yij d1yijw1 W:1-7,30-36,38-51,51-56 2hgj d2hgj21 2:2-9,32-39,40-51,53-60 1kc8 d1kc8x_ X:1-7,30-36,38-51,51-56 1yi2 d1yi2w1 W:1-7,30-36,38-51,51-56 1vq4 d1vq4w1 W:1-7,30-36,38-51,51-56 1k8a d1k8ax_ X:1-7,30-36,38-51,51-56 1q81 d1q81x_ X:1-7,30-36,38-49,51-56 1vql d1vqlw1 W:1-8,30-36,38-49,51-56 2otl d2otlw1 W:1-7,30-36,38-51,51-56 1k73 d1k73x_ X:1-7,30-36,38-51,51-56 2hgq d2hgq21 2:2-9,33-39,40-51,53-60 1nji d1njix_ X:1-7,30-36,38-51,51-56 1q7y d1q7yx_ X:1-7,30-36,38-49,51-56 1k9m d1k9mx_ X:1-7,30-36,38-51,51-56 2qoz d2qozy1 Y:2-9,33-39,40-51,53-58 1jj2 d1jj2v_ V:1-7,30-36,38-51,51-56 2qp1 d2qp1y1 Y:2-9,33-39,40-51,53-58 1vq6 d1vq6w1 W:1-7,30-36,38-49,51-56 2otj d2otjw1 W:1-7,30-36,38-49,51-56 1vq7 d1vq7w1 W:1-7,30-36,38-49,51-56 1yj9 d1yj9w1 W:1-7,30-36,38-49,51-56 1m90 d1m90x_ X:1-7,30-36,38-51,51-56 1vqo d1vqow1 W:1-7,30-36,38-49,51-56 1vqm d1vqmw1 W:1-7,30-36,38-49,51-56 1qvg d1qvgv_ V:1-7,30-36,38-49,51-56 1vqp d1vqpw1 W:1-7,30-36,38-49,51-56 1n8r d1n8rx_ X:1-7,30-36,38-49,51-56 1vq5 d1vq5w1 W:1-7,30-36,38-49,51-56 1yhq d1yhqw1 W:1-7,30-36,38-49,51-56 1m1k d1m1kx_ X:1-7,30-36,38-49,51-56 1qvf d1qvfv_ V:1-7,30-36,38-49,51-56 1ffk d1ffkt_ T:1-7,30-36,38-49,51-56 1s72 d1s72w_ W:1-7,30-36,38-49,51-56 1vqn d1vqnw1 W:1-7,30-36,38-49,51-56 1vqk d1vqkw1 W:1-7,30-36,38-49,51-56 1vq8 d1vq8w1 W:1-7,30-36,38-49,51-56 1vq9 d1vq9w1 W:1-7,30-36,38-49,51-56 2qox d2qoxy1 Y:2-9,33-39,40-51,53-58 2qov d2qovy1 Y:2-9,33-39,40-51,53-58 2qba d2qbay1 Y:3-9,33-38,40-51,53-58 2qbc d2qbcy1 Y:3-9,33-38,40-51,53-58 2qam d2qamy1 Y:3-9,33-38,40-51,53-58 2qao d2qaoy1 Y:3-9,33-38,40-51,53-58 2z4n d2z4ny1 Y:3-9,33-38,40-51,53-58 2z4l d2z4ly1 Y:3-9,33-38,40-51,53-58 2qbk d2qbky1 Y:3-9,33-38,40-51,53-58 2qbi d2qbiy1 Y:3-9,33-38,40-51,53-58 2qbg d2qbgy1 Y:3-9,33-38,40-51,53-58 2qbe d2qbey1 Y:3-9,33-38,40-51,53-58 2gya d2gyax1 X:3-9,33-38,40-51,53-58 2gyc d2gycx1 X:3-9,33-38,40-51,53-58 3df2 d3df2y1 Y:3-9,33-38,40-51,53-58 3df4 d3df4y1 Y:3-9,33-38,40-51,53-58 2zjp d2zjpw1 W:1-7,29-34,37-48,50-55 2zjr d2zjrw1 W:1-6,28-34,37-48,50-55 3cf5 d3cf5w1 W:1-7,30-34,37-48,50-55 3dll d3dllw1 W:1-6,30-34,37-48,50-55 2zjq d2zjqw1 W:1-6,30-34,37-48,50-55 1xbp d1xbpx1 X:2-7,28-32,37-48,50-54 29. d.58.11 EF-G C-terminal domain-like Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1n0v d1n0vc4 C:488-496,526-533,534-551,553-562 1fnm d1fnma4 A:408-416,446-454,455-471,473-482 1n0v d1n0vd4 D:488-496,526-533,534-551,553-562 1zm4 d1zm4a4 A:488-496,526-533,534-551,553-562 1zm9 d1zm9a4 A:488-496,526-533,534-551,553-562 1zm2 d1zm2a4 A:488-496,526-533,534-551,553-562 1zm3 d1zm3a4 A:488-496,526-533,534-551,553-562 1zm4 d1zm4e4 E:488-496,526-533,534-551,553-562 1zm4 d1zm4c4 C:488-495,526-533,534-551,554-562 2bm0 d2bm0a4 A:408-415,448-454,455-471,474-482 2npf d2npfb4 B:488-496,526-533,534-551,553-558 1zm9 d1zm9c4 C:488-495,526-533,534-551,554-562 2npf d2npfa4 A:488-496,526-533,534-551,553-558 1zm2 d1zm2c4 C:488-495,526-533,534-551,554-562 1zm3 d1zm3c4 C:488-495,526-533,534-551,554-562 2p8w d2p8wt4 T:488-496,526-533,534-551,553-558 2p8x d2p8xt4 T:488-496,526-533,534-551,553-558 2p8z d2p8zt4 T:488-496,526-533,534-551,553-558 1u2r d1u2ra4 A:488-496,526-533,534-551,553-558 2p8y d2p8yt4 T:488-496,526-533,534-551,553-558 1n0u d1n0ua4 A:488-496,526-533,534-551,553-558 1p9q d1p9qc3 C:162-172,197-207,206-222,224-234 1t95 d1t95a3 A:168-178,203-213,212-228,231-240 2e1r d2e1ra4 A:488-496,526-533,534-551,553-558 2bv3 d2bv3a4 A:408-413,449-454,455-463,476-482 2bm1 d2bm1a4 A:408-415,449-454,455-471,474-482 1zm2 d1zm2e4 E:488-496,526-533,534-551,553-557 2dy1 d2dy1a4 A:382-390,420-428,429-444,446-451 1wdt d1wdta5 A:382-390,420-428,429-444,446-451 2p8w d2p8wt5 T:730-736,765-772,779-789,792-797 2p8z d2p8zt5 T:730-736,765-772,779-789,792-797 2p8x d2p8xt5 T:730-736,765-772,779-789,792-797 2p8y d2p8yt5 T:730-736,765-772,779-789,792-797 1efg d1efga4 A:597-613,640-648,654-664,667-675 1wdt d1wdta4 A:568-584,609-618,624-634,637-649 1elo d1eloa4 A:598-613,639-649,654-664,667-675 2dy1 d2dy1a5 A:568-584,609-618,624-634,637-645 1ktv d1ktva4 A:598-613,639-649,654-664,667-675 2npf d2npfa5 A:720-736,765-774,779-789,791-804 1ktv d1ktvb4 B:598-613,639-649,654-664,667-675 1n0u d1n0ua5 A:720-736,765-774,779-789,792-804 2bv3 d2bv3a5 A:598-613,639-649,654-664,667-675 2bm0 d2bm0a5 A:598-613,639-649,654-664,667-675 1fnm d1fnma5 A:598-613,639-649,654-664,667-675 1u2r d1u2ra5 A:720-736,765-774,779-789,792-800 2npf d2npfb5 B:720-736,765-774,779-789,791-804 2efg d2efga4 A:597-613,639-648,654-664,667-675 2bm1 d2bm1a5 A:597-613,639-648,654-664,667-675 1dar d1dara4 A:597-613,639-649,654-664,667-675 1n0v d1n0vd5 D:720-737,764-774,779-789,792-804 1zm4 d1zm4a5 A:720-737,764-774,779-789,792-804 1n0v d1n0vc5 C:720-737,764-774,779-789,792-804 1zm2 d1zm2a5 A:720-737,764-774,779-789,792-804 2e1r d2e1ra5 A:720-737,764-774,779-789,792-804 1zm4 d1zm4c5 C:720-737,764-774,779-789,792-804 1zm2 d1zm2c5 C:720-737,764-774,779-789,792-804 1zm4 d1zm4e5 E:720-737,764-774,779-789,792-804 1zm3 d1zm3c5 C:720-737,764-774,779-789,792-804 1zm3 d1zm3a5 A:720-737,764-774,779-789,792-804 1zm9 d1zm9e5 E:720-737,764-774,779-789,792-804 1zm3 d1zm3e5 E:720-737,764-774,779-789,792-804 1zm9 d1zm9c5 C:720-737,764-774,779-789,792-804 1zm2 d1zm2e5 E:720-737,764-774,779-789,792-804 1zm9 d1zm9a5 A:720-737,764-774,779-789,792-804 31. d.58.3 Protease propeptides/inhibitors Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2boa d2boab2 B:9-16,51-58,57-72,74-81 2boa d2boaa2 A:9-16,51-58,57-72,74-81 1v5i d1v5ib1 B:3-10,40-49,49-60,63-70 1spb d1spbp_ P:8-15,45-51,52-62,64-71 1scj d1scjb_ B:308-315,345-351,352-362,364-371 1o6x d1o6xa_ A:9-16,49-56,55-70,72-78 1kn6 d1kn6a_ A:6-12,39-45,60-70,71-76 1t1e d1t1ea2 A:39-47,109-117,117-126,155-161 1itp d1itpa_ A:4-11,41-49,50-61,64-72 1pyt d1pyta_ A:9-16,51-58,58-72,74-81 1pba d1pbaa_ A:8-19,48-58,60-72,74-78 1t1e d1t1ea2 A:39-47,109-117,149-156,155-161 32. d.58.23 Probable ACP-binding domain of malonyl-CoA ACP transacylase Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1mla d1mlaa2 A:130-137,165-172,173-187,189-194 1nm2 d1nm2a2 A:135-142,166-173,173-184,189-194 34. d.61.1 LigT-like LigT-like duplication of beta-alpha-beta-alpha-beta motif: antiparallel beta sheet forms barrel (n=6, S=8) similar to the barrel of prokaryotic DNA topoisomerases I and III 1fsi d1fsib_ B:6-16,42-52,52-67,154-161 1jh7 d1jh7a_ A:6-16,42-52,52-67,154-162 1jh6 d1jh6b_ B:6-16,42-52,52-68,154-162 1jh6 d1jh6a_ A:6-16,42-52,52-68,154-162 1fsi d1fsic_ C:6-16,42-52,52-68,154-162 1fsi d1fsia_ A:6-16,42-52,52-68,154-161 2fsq d2fsqa1 A:38-43,85-91,108-123,221-226 2ilx d2ilxa1 A:8-15,70-77,91-100,207-218 1iuh d1iuha_ A:2-8,39-47,49-68,155-166 2ilx d2ilxa1 A:100-113,114-121,123-131,198-205 36. d.58.55 DOPA-like probable biological unit is homodimer; the extra C-terminal strand, adjacent and antiparallel to strand 4, contributes to the dimerisation interface ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2p8i d2p8ib1 B:9-18,56-64,67-80,83-90 2p8i d2p8id1 D:9-18,56-64,67-80,82-90 2nyh d2nyhb1 B:9-18,56-64,67-80,82-90 2nyh d2nyha1 A:9-18,56-64,67-80,82-90 2p8i d2p8ia1 A:9-18,56-64,67-80,82-90 2p8i d2p8ic1 C:9-18,56-64,67-80,82-90 37. b.51.1 ValRS/IleRS/LeuRS editing domain ValRS/IleRS/LeuRS editing domain core: barrel, closed; n=6, S=8; topology is similar to that of the acid proteases barrel 1udz d1udza_ A:245-254,255-261,261-270,274-282 1udz d1udzb_ B:245-254,255-261,261-270,274-281 1jzq d1jzqa2 A:245-254,255-262,261-270,274-282 1ile d1ilea2 A:245-254,255-262,261-270,274-282 1ue0 d1ue0a_ A:247-254,255-261,261-270,274-280 1ue0 d1ue0b_ B:247-254,255-262,261-270,274-280 1jzs d1jzsa2 A:247-254,255-262,261-270,274-280 1qu3 d1qu3a2 A:250-257,259-264,264-276,284-290 1jzq d1jzqa2 A:200-212,221-229,358-374,375-384 1wka d1wkaa1 A:195-205,207-215,313-329,330-337 1h3n d1h3na2 A:225-237,241-248,393-409,410-418 1obc d1obca2 A:225-237,241-248,393-409,410-418 1wk9 d1wk9a1 A:195-205,207-215,313-329,330-337 1jzs d1jzsa2 A:197-212,221-229,358-374,375-387 1obh d1obha2 A:225-237,241-248,393-409,410-418 1ile d1ilea2 A:197-212,221-229,358-374,375-387 1wka d1wkaa1 A:195-205,207-215,216-223,330-337 1wk9 d1wk9a1 A:195-205,207-215,216-223,330-337 1udz d1udzb_ B:203-212,221-229,230-237,375-381 1ue0 d1ue0a_ A:203-212,221-229,230-237,375-381 1udz d1udza_ A:203-212,221-229,230-237,375-381 1ue0 d1ue0b_ B:203-212,221-229,230-237,375-381 1jzq d1jzqa2 A:200-212,221-229,230-237,375-384 1ile d1ilea2 A:197-212,221-229,230-237,375-387 1udz d1udzb_ B:203-212,221-229,358-374,375-381 1jzs d1jzsa2 A:197-212,221-229,230-237,375-387 1ue0 d1ue0a_ A:203-212,221-229,358-374,375-381 1udz d1udza_ A:203-212,221-229,358-374,375-381 1ue0 d1ue0b_ B:203-212,221-229,358-374,375-381 1qu2 d1qu2a2 A:201-211,225-232,366-374,383-399 1ffy d1ffya2 A:201-211,225-232,366-374,383-399 1iyw d1iywa3 A:193-205,206-215,313-329,330-344 1iyw d1iywb3 B:193-205,206-215,313-329,330-344 1ffy d1ffya2 A:201-211,225-232,233-240,383-399 1qu2 d1qu2a2 A:201-211,225-232,233-240,383-399 1qu3 d1qu3a2 A:202-215,225-233,366-379,385-399 1iyw d1iywb3 B:193-205,206-215,216-223,330-344 1iyw d1iywa3 A:193-205,206-215,216-223,330-344 1ivs d1ivsa3 A:194-205,207-215,313-329,330-345 1gax d1gaxa2 A:194-205,206-215,313-329,330-345 1ivs d1ivsb3 B:194-205,206-215,313-329,330-346 1gax d1gaxb2 B:194-205,206-215,313-329,330-346 1ivs d1ivsa3 A:194-205,207-215,216-223,330-345 1gax d1gaxa2 A:194-205,206-215,216-223,330-345 1gax d1gaxb2 B:194-205,206-215,216-223,330-346 1ivs d1ivsb3 B:194-205,206-215,216-223,330-346 38. d.58.44 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains duplication: the N- and C-terminal halves of the whole proteins are structurally similar; each half contains two domains of this fold ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1iwg d1iwga3 A:570-578,623-632,643-659,661-667 1oy6 d1oy6a3 A:570-578,623-632,643-659,661-667 1oye d1oyea3 A:570-578,623-632,643-659,661-667 1oyd d1oyda3 A:570-578,623-632,643-659,661-667 1oy8 d1oy8a3 A:570-578,623-632,643-659,661-667 1oy9 d1oy9a3 A:570-578,623-632,643-659,661-667 1oy8 d1oy8a4 A:678-687,821-832,836-851,854-859 1oy9 d1oy9a4 A:678-687,821-832,836-851,854-859 1oyd d1oyda4 A:678-687,821-832,836-851,854-859 1oye d1oyea4 A:678-687,821-832,836-851,854-859 1iwg d1iwga4 A:678-687,821-833,836-851,854-859 1oy6 d1oy6a4 A:678-687,821-833,836-851,854-859 1oy9 d1oy9a1 A:40-49,86-95,99-115,126-132 1oy8 d1oy8a1 A:40-49,86-95,99-115,126-132 1oye d1oyea1 A:40-49,86-95,99-115,126-132 1iwg d1iwga1 A:40-49,86-95,99-118,126-132 1oyd d1oyda1 A:40-49,86-95,99-115,126-132 1oy6 d1oy6a1 A:40-49,86-95,99-118,126-132 1oy9 d1oy9a2 A:136-145,286-293,298-317,320-329 1oyd d1oyda2 A:136-146,286-293,298-307,319-329 1oy8 d1oy8a2 A:136-146,286-293,298-306,319-329 1oyd d1oyda2 A:136-146,286-293,310-317,319-329 1oye d1oyea2 A:136-146,286-293,298-317,319-329 1oy6 d1oy6a2 A:136-146,286-293,298-317,319-329 1oy8 d1oy8a2 A:136-146,286-293,310-317,319-329 1iwg d1iwga2 A:136-146,288-293,298-317,319-328 40. d.68.2 EPT/RTPC-like IF3-like beta-alpha-beta-alpha-beta(2); 2 layers; mixed sheet 1243, strand 4 is antiparallel to the rest 1eyn d1eyna_ A:1-9,384-391,401-410,412-418 1ybg d1ybgc1 C:1-9,384-391,401-410,412-418 1dlg d1dlga_ A:1-9,383-391,401-410,412-418 1dlg d1dlgb_ B:1-9,384-391,401-410,412-418 1ryw d1rywc_ C:1-9,384-391,401-410,412-418 1naw d1nawa_ A:1-9,383-391,401-410,412-418 1ryw d1rywe_ E:1-9,384-391,401-410,412-418 1naw d1nawb_ B:1-9,384-391,401-410,412-418 1ryw d1rywf_ F:1-9,384-391,401-410,412-418 1ybg d1ybgb1 B:1-9,384-391,401-410,412-418 1ejc d1ejca_ A:1-9,384-391,401-410,412-418 1ryw d1rywg_ G:1-9,384-391,401-410,412-418 1ejd d1ejda_ A:1-9,383-391,401-410,412-418 1ryw d1rywh_ H:1-9,384-391,401-410,412-418 1q3g d1q3gl_ L:1-9,384-391,401-410,412-418 1ybg d1ybga1 A:1-9,384-391,401-410,412-418 1ryw d1rywd_ D:1-9,384-391,401-410,412-418 1ryw d1rywa_ A:1-9,384-391,401-410,412-418 1ejd d1ejdb_ B:1-9,384-391,401-410,412-418 1ybg d1ybgd1 D:1-9,384-391,401-410,412-418 1q3g d1q3gf_ F:1-9,384-391,401-410,412-418 1q3g d1q3gj_ J:1-9,384-391,401-410,412-418 1q3g d1q3gk_ K:1-9,384-391,401-410,412-418 1q3g d1q3gd_ D:1-9,384-391,401-410,412-418 1q3g d1q3gc_ C:1-9,384-391,401-410,412-418 1q3g d1q3gy_ Y:1-9,384-391,401-410,412-418 1q3g d1q3gw_ W:1-9,384-391,401-410,412-418 1q3g d1q3ge_ E:1-9,384-391,401-410,412-418 1q3g d1q3gi_ I:1-9,384-391,401-410,412-418 1q3g d1q3gz_ Z:1-9,384-391,401-410,412-418 1q3g d1q3gx_ X:1-9,384-391,401-410,412-418 1q3g d1q3ga_ A:1-9,384-391,401-410,412-418 1q3g d1q3gh_ H:1-9,384-391,401-410,412-418 1q3g d1q3gb_ B:1-9,384-391,401-410,412-418 1ryw d1rywb_ B:1-9,383-391,401-410,412-418 1uae d1uaea_ A:1-9,384-391,401-410,412-418 1q3g d1q3gg_ G:1-9,384-391,401-410,412-418 1a2n d1a2na_ A:1-9,384-391,401-410,412-418 41. e.51.1 Urocanase Urocanase 3 domains; d1: alpha+beta [alpha(2)-beta(3); mixed sheet: 213]; d2: alpha/beta of the NAD(P)-binding Rossmann-fold superfamily (scop_sf 51735, most similar to scop_fa 51883 and scop_fa 51736); d3: alpha+beta of the glutamine synthetase/guanido kinase fold (scop_cf 55930); d1 and d3 form a single beta-sheet 1x87 d1x87a_ A:354-362,402-408,409-427,431-439 1x87 d1x87b_ B:353-362,402-409,409-427,431-438 1w1u d1w1ub_ B:357-367,407-414,414-432,436-443 1uwk d1uwkb_ B:357-367,407-414,414-432,436-443 1uwk d1uwka_ A:357-367,407-414,414-432,436-443 1w1u d1w1ua_ A:357-367,407-414,414-432,436-443 1uwl d1uwlb_ B:357-367,407-414,414-432,436-443 1uwl d1uwla_ A:357-367,407-414,414-432,436-443 43. d.86.1 eIF4e-like eIF4e-like beta(2)-alpha-beta(2)-alpha-beta(2)-alpha-beta-2; 2 layers: alpha/beta; antiparallel sheet: 21356478 1ztp d1ztpb1 B:125-134,169-178,181-196,199-206 1rf8 d1rf8a_ A:41-50,62-68,70-81,90-98 1ztp d1ztpa1 A:125-134,169-178,181-196,199-205 2q4k d2q4ka1 A:125-134,169-178,181-196,199-205 1ap8 d1ap8a_ A:41-49,62-69,70-81,90-97 1ap8 d1ap8a_ A:111-120,159-169,171-187,193-198 2q4k d2q4kb1 B:125-135,168-178,181-196,199-205 1rf8 d1rf8a_ A:112-120,160-168,171-187,193-199 1ejh d1ejha_ A:109-118,159-169,172-188,195-199 1ej1 d1ej1b_ B:42-50,59-67,68-79,88-96 2v8x d2v8xa1 A:109-118,159-169,172-188,195-199 2v8y d2v8ya1 A:109-118,159-169,172-188,195-199 1ej1 d1ej1b_ B:109-118,159-169,172-188,195-199 1ej4 d1ej4a_ A:109-118,159-169,172-188,195-199 2v8w d2v8wa1 A:42-50,60-67,68-79,88-96 1ejh d1ejhb_ B:109-118,159-169,172-188,195-199 1ipb d1ipba_ A:109-118,159-169,172-188,195-200 1wkw d1wkwa1 A:42-50,60-67,68-79,87-96 2v8x d2v8xe1 E:42-50,60-67,68-79,87-96 1ejh d1ejhd_ D:42-50,60-67,68-79,87-96 1ejh d1ejhb_ B:42-50,60-67,68-79,88-96 2v8w d2v8we1 E:42-50,60-67,68-79,87-96 1ej1 d1ej1a_ A:109-118,159-169,172-188,195-199 1ipc d1ipca_ A:42-50,60-67,68-80,87-96 2v8y d2v8ye1 E:109-118,159-169,172-188,195-200 2v8w d2v8wa1 A:109-118,159-169,172-188,195-199 2v8w d2v8we1 E:109-118,159-169,172-188,195-200 1ejh d1ejhc_ C:109-118,159-169,172-188,195-199 1ejh d1ejhd_ D:109-118,159-169,172-188,195-200 1ipc d1ipca_ A:109-118,159-169,172-188,195-200 1l8b d1l8bb_ B:109-119,159-169,172-188,195-199 1l8b d1l8ba_ A:109-119,159-169,172-188,195-199 2v8x d2v8xe1 E:109-118,159-169,172-188,195-200 1wkw d1wkwa1 A:109-118,159-169,172-188,195-200 2v8y d2v8ye1 E:42-50,60-67,68-79,87-96 1ipb d1ipba_ A:42-50,60-67,68-79,88-96 2v8y d2v8ya1 A:42-50,60-67,68-79,87-96 2v8x d2v8xa1 A:42-50,60-67,68-79,87-96 1l8b d1l8bb_ B:42-49,60-67,68-79,87-96 1ej1 d1ej1a_ A:42-50,60-67,68-79,87-96 1ejh d1ejha_ A:42-50,60-67,68-79,87-96 1ej4 d1ej4a_ A:42-50,60-67,68-80,87-96 1ejh d1ejhc_ C:42-50,60-67,68-79,87-96 1l8b d1l8ba_ A:42-50,60-67,68-79,87-96 44. d.58.38 Urease metallochaperone UreE, C-terminal domain Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1ear d1eara2 A:75-83,108-114,115-126,127-135 1eb0 d1eb0a2 A:75-83,108-114,115-126,127-135 1gmw d1gmwc2 C:71-79,104-110,111-122,124-131 1gmu d1gmud2 D:70-79,104-110,111-122,124-131 1gmu d1gmuc2 C:70-79,104-110,111-122,125-131 1gmw d1gmwa2 A:71-79,104-110,111-122,124-131 1gmv d1gmva2 A:70-79,104-110,111-122,124-131 1gmw d1gmwb2 B:70-79,104-110,111-122,124-131 1gmw d1gmwd2 D:70-79,104-110,111-122,124-131 1gmu d1gmub2 B:70-79,104-110,111-122,124-131 1gmu d1gmua2 A:70-79,104-110,111-122,125-131 1gmv d1gmvb2 B:70-78,104-110,111-122,124-131 45. d.94.1 HPr-like HPr-like beta-alpha-beta(2)-alpha-beta-alpha; 2 layers: a/b; antiparallel sheet 1423 1rzr d1rzry_ Y:31-38,39-44,46-54,59-67 2ak7 d2ak7a1 A:31-38,39-44,46-54,58-67 1mo1 d1mo1c_ C:31-38,39-44,46-54,58-67 1mo1 d1mo1a_ A:31-38,39-44,46-54,58-67 2jel d2jelp_ P:31-38,39-44,46-54,59-67 1mo1 d1mo1d_ D:31-38,39-44,46-54,58-67 1mo1 d1mo1b_ B:31-38,39-44,46-54,58-67 1mu4 d1mu4a_ A:31-38,39-44,46-54,58-67 2ak7 d2ak7b1 B:31-38,39-44,46-54,58-67 1zvv d1zvvw1 W:31-38,39-44,46-54,59-67 1kkm d1kkmi_ I:31-38,39-44,46-54,57-67 1mu4 d1mu4b_ B:31-38,39-44,46-54,58-67 1kkl d1kklh_ H:31-38,39-44,46-54,57-67 2oen d2oenl1 L:31-38,39-44,46-54,59-67 2hpr d2hpra_ A:31-38,39-44,46-54,57-67 1kkm d1kkmj_ J:31-38,39-44,46-54,58-67 1opd d1opda_ A:31-38,39-44,46-54,58-67 1vrc d1vrcc1 C:231-238,239-244,246-254,257-267 1vrc d1vrcd1 D:231-238,239-244,246-254,257-267 1poh d1poha_ A:31-38,39-44,46-54,57-67 1ggr d1ggrb_ B:331-338,339-344,346-354,357-367 2nzu d2nzul1 L:31-38,39-44,46-54,59-67 1kkm d1kkmh_ H:31-38,39-44,46-54,58-67 1j6t d1j6tb_ B:331-338,339-344,346-354,357-367 1zvv d1zvvp1 P:31-38,39-44,46-54,57-67 1kkl d1kkli_ I:31-38,39-44,46-54,57-67 1pch d1pcha_ A:31-38,39-44,46-54,58-67 1cm3 d1cm3a_ A:31-38,39-44,46-54,58-67 1sph d1sphb_ B:31-38,39-44,46-54,58-67 1rzr d1rzrt_ T:31-38,39-44,46-54,57-67 1hdn d1hdna_ A:30-38,39-44,46-54,59-68 1kkl d1kklj_ J:31-38,39-44,46-54,57-67 1zvv d1zvvj1 J:31-38,39-44,46-54,59-67 1fu0 d1fu0a_ A:31-38,39-44,46-54,57-67 1rzr d1rzrs_ S:31-38,39-44,46-54,57-67 1cm2 d1cm2a_ A:31-38,39-44,46-54,57-67 1fu0 d1fu0b_ B:131-138,139-144,146-154,158-167 1sph d1spha_ A:30-38,39-44,46-54,58-68 1qr5 d1qr5a_ A:31-38,39-44,47-54,56-67 1ptf d1ptfa_ A:31-38,39-44,46-54,57-67 3eze d3ezeb_ B:331-338,339-344,346-354,357-367 3eza d3ezab_ B:31-38,39-44,46-54,57-67 3ezb d3ezbb_ B:331-338,339-344,346-354,357-367 1rzr d1rzrl_ L:31-38,39-44,46-54,57-67 2nzv d2nzvl1 L:31-38,39-44,46-54,57-67 1ka5 d1ka5a_ A:31-38,39-44,46-54,57-67 1pfh d1pfha_ A:33-38,39-44,46-54,57-66 2hid d2hida_ A:31-38,39-44,46-54,57-67 1jem d1jema_ A:31-38,39-44,46-54,57-67 46. b.45.1 FMN-binding split barrel related to the ferredoxin reductase-like FAD-binding domain ! Split barrel-like barrel; n=6, S=10; greek-key 1rz1 d1rz1b_ B:17-25,26-34,54-64,64-71 1rz1 d1rz1g_ G:17-25,26-34,54-64,64-71 1rz1 d1rz1c_ C:17-25,26-34,54-64,64-71 1rz1 d1rz1f_ F:17-25,26-34,54-64,64-71 1rz1 d1rz1d_ D:17-25,26-34,54-64,64-71 1rz0 d1rz0f_ F:17-25,26-34,54-64,64-71 1rz0 d1rz0b_ B:17-25,26-34,54-64,64-71 1rz1 d1rz1h_ H:17-25,26-34,54-64,64-71 1rz1 d1rz1a_ A:17-25,26-34,54-64,64-71 1rz0 d1rz0c_ C:17-25,26-34,54-64,64-71 1rz0 d1rz0a_ A:17-25,26-34,54-64,64-71 1rz1 d1rz1e_ E:17-25,26-34,54-64,64-71 1rz0 d1rz0g_ G:17-25,26-34,54-64,64-71 1rz0 d1rz0h_ H:17-25,26-34,54-64,64-71 1rz0 d1rz0d_ D:17-25,26-34,54-64,64-71 1rz0 d1rz0e_ E:17-25,26-34,54-64,64-71 1usc d1usca_ A:21-29,30-38,58-68,68-75 1usf d1usfa_ A:21-29,30-38,58-68,68-75 1usc d1uscb_ B:21-29,30-38,58-68,68-75 1usf d1usfb_ B:21-29,30-38,58-68,68-75 1wgb d1wgba_ A:17-25,26-34,54-64,64-71 1yoa d1yoaa1 A:17-25,26-34,54-64,64-71 1eje d1ejea_ A:29-37,39-47,67-77,77-84 2hq7 d2hq7a1 A:18-27,29-39,54-65,65-73 1y30 d1y30a1 A:18-27,29-37,55-65,65-73 1xxo d1xxob_ B:18-27,29-37,55-65,65-73 1w9a d1w9ab_ B:18-27,29-37,55-65,65-73 2arz d2arzb1 B:17-25,31-39,55-65,65-73 2arz d2arza1 A:17-25,31-39,55-65,65-73 2aq6 d2aq6a1 A:18-27,29-37,55-65,65-73 1i0s d1i0sb_ B:13-21,22-30,50-60,60-68 1jnw d1jnwa_ A:51-60,62-71,87-97,97-106 1axj d1axja_ A:13-23,24-33,51-62,62-71 1i0s d1i0sa_ A:13-21,22-30,50-60,60-68 1i0r d1i0rb_ B:13-21,22-30,50-60,60-68 1i0r d1i0ra_ A:13-21,22-30,50-60,60-68 1rfe d1rfea_ A:25-33,35-43,59-69,69-78 2nr4 d2nr4a1 A:28-38,40-50,63-73,73-80 2hq7 d2hq7b1 B:18-27,29-39,54-65,65-75 1wli d1wlia1 A:13-23,24-34,51-62,62-71 2nr4 d2nr4b1 B:28-38,40-50,63-73,73-79 2i02 d2i02b1 B:23-31,33-41,60-70,70-80 2asf d2asfa1 A:23-31,33-39,59-69,69-78 1wv4 d1wv4a_ A:51-60,62-72,87-97,97-106 1g79 d1g79a_ A:51-60,62-72,87-97,97-106 2hti d2htia1 A:26-34,35-43,59-69,69-78 1dnl d1dnla_ A:51-60,62-72,87-97,97-106 2fhq d2fhqa1 A:18-27,29-38,55-65,65-74 2fhq d2fhqb1 B:18-27,29-38,55-65,65-74 1wli d1wlib1 B:13-23,24-34,51-62,62-71 2a2j d2a2ja1 A:61-70,71-80,96-106,106-116 1wlk d1wlkc1 C:14-23,24-33,51-62,62-72 2a2j d2a2jb1 B:61-70,71-80,96-106,106-116 2i02 d2i02a1 A:22-31,33-42,60-70,70-80 1nrg d1nrga_ A:79-88,90-99,115-125,125-135 1wlk d1wlkd1 D:13-23,24-34,51-62,62-72 1w9a d1w9aa_ A:18-27,29-35,55-65,65-73 1wlk d1wlkb1 B:13-23,24-34,51-62,62-72 1flm d1flmb_ B:13-23,24-34,51-62,62-72 1xhn d1xhnd1 D:31-42,46-55,75-85,85-93 1xhn d1xhna1 A:31-42,46-55,75-85,85-93 1xhn d1xhnc1 C:31-42,46-55,75-85,85-93 2hq9 d2hq9a1 A:19-28,29-37,52-62,62-72 1y30 d1y30b1 B:18-27,29-35,55-65,65-73 1wv4 d1wv4b_ B:51-60,62-72,87-97,97-107 2iml d2imlc1 C:10-22,24-38,50-60,60-67 2aq6 d2aq6b1 B:18-27,29-35,55-65,65-73 1xxo d1xxoa_ A:18-27,29-35,55-65,65-73 2iml d2imlb1 B:10-22,24-38,50-60,60-67 1flm d1flma_ A:13-23,24-34,51-62,62-72 1xhn d1xhnb1 B:31-42,46-55,75-85,85-93 2iml d2imla1 A:10-22,24-38,50-60,60-67 2iml d2imld1 D:10-22,24-38,50-60,60-67 1t9m d1t9ma_ A:49-58,60-69,85-95,95-105 1t9m d1t9mb_ B:49-58,60-69,85-95,95-105 1wlk d1wlka1 A:13-23,24-34,51-62,62-72 1g78 d1g78a_ A:51-60,62-72,87-97,97-107 1g76 d1g76a_ A:51-60,62-72,87-97,97-107 1g77 d1g77a_ A:51-60,62-72,87-97,97-107 1ty9 d1ty9b_ B:57-66,68-78,93-103,103-113 2hq9 d2hq9b1 B:19-28,29-37,52-62,62-73 2ptf d2ptfa1 A:30-43,45-51,70-80,80-87 1ty9 d1ty9a_ A:57-66,68-78,93-103,103-113 2ptf d2ptfb1 B:30-43,45-51,70-80,80-87 2fur d2fura1 A:32-41,42-51,66-75,75-91 2fur d2furb1 B:32-41,42-51,66-75,75-91 1vl7 d1vl7a_ A:19-28,30-43,55-65,65-73 2idb d2idbc1 C:162-167,174-178,197-211,214-222 2idb d2idba1 A:162-167,174-178,197-211,214-222 2idb d2idbb1 B:162-167,174-178,197-211,214-222 2fg9 d2fg9a1 A:21-29,31-39,54-65,65-81 1ci0 d1ci0b_ B:56-66,67-76,94-104,104-114 1ci0 d1ci0a_ A:56-66,67-76,94-104,104-114 48. d.250.1 Folate-binding domain some topological similarity to Formylmethanofuran:tetrahydromethanopterin formyltransferase ! Folate-binding domain duplication: consists of two beta(2)-alpha-beta(3)-alpha subdomains swapped with the first strands 1nrk d1nrka2 A:26-35,80-88,87-103,106-112 1vlo d1vloa2 A:51-59,107-115,114-130,134-139 1vly d1vlya2 A:26-35,81-88,87-103,106-112 1wor d1wora2 A:50-59,105-113,112-128,131-138 1wos d1wosa2 A:50-59,105-113,112-128,131-138 1woo d1wooa2 A:50-59,105-113,112-128,131-138 1wop d1wopa2 A:50-59,105-113,112-128,131-138 1pj6 d1pj6a4 A:509-516,561-567,569-587,591-598 1pj7 d1pj7a4 A:509-516,561-567,569-587,591-598 1pj5 d1pj5a4 A:509-516,561-567,569-587,591-598 1v5v d1v5va2 A:54-63,109-117,119-139,141-148 1v5v d1v5vb2 B:54-63,109-117,116-138,141-148 49. d.142.2 DNA ligase/mRNA capping enzyme, catalytic domain has a circularly permuted topology ! ATP-grasp Consists of two subdomains with different alpha+beta folds ! shares functional and structural similarities with the PIPK and protein kinase superfamilies 1dgs d1dgsa3 A:109-117,254-260,260-275,282-290 1v9p d1v9pa3 A:111-120,257-263,263-278,284-293 1dgs d1dgsb3 B:2109-2117,2254-2260,2260-2278,2282-2290 1b04 d1b04a_ A:108-116,252-256,257-272,278-287 1a0i d1a0ia2 A:28-34,194-199,200-215,218-223 1v9p d1v9pb3 B:2111-2120,2257-2263,2263-2281,2284-2293 1ta8 d1ta8a_ A:114-122,258-262,263-278,284-293 1b04 d1b04b_ B:108-116,252-256,257-272,278-287 1s68 d1s68a_ A:29-35,151-157,157-164,205-211 1tae d1taea_ A:114-122,258-262,263-278,284-293 1tae d1taec_ C:114-122,258-262,263-278,284-293 1tae d1taeb_ B:114-122,258-262,263-278,284-293 1tae d1taed_ D:114-122,258-262,263-278,284-293 1p8l d1p8la2 A:21-27,139-143,144-159,162-167 1xdn d1xdna_ A:80-87,245-250,250-257,284-290 2q2u d2q2ua2 A:20-28,139-144,144-159,160-167 2q2u d2q2uc2 C:20-28,139-144,144-159,160-167 2q2u d2q2ub2 B:20-28,139-144,144-159,160-167 2q2u d2q2ud2 D:20-28,139-144,144-159,160-167 2q2t d2q2ta2 A:20-28,139-144,144-159,160-167 1fvi d1fvia2 A:20-28,139-144,144-159,160-167 50. d.344.1 PriA/YqbF domain associated with known or presumed DNA-binding domains; this superfamily also includes the C-terminal domain of PriA (PDB entry 1zt2) GINS/PriA/YqbF domain beta(4)-alpha-beta; 3-stranded antiparallel beta-sheet (strands 4,1 and 5) are covered on the same side by the helix and beta hairpin of strands 2 and 3; similarity to the L9 N-domain-like fold (scop_cf 55657) and the PsaD fold (scop_sf 64243) 2out d2outa2 A:7-14,30-38,38-49,51-56 2q9q d2q9qd2 D:31-38,62-69,69-77,83-87 2q9q d2q9qh2 H:31-38,62-69,69-77,83-87 2eho d2ehoh2 H:31-38,62-69,69-77,83-87 2e9x d2e9xg2 G:31-38,62-69,69-77,83-87 2eho d2ehol2 L:31-38,62-69,69-77,83-87 2e9x d2e9xc2 C:1031-1038,1062-1069,1069-1077,1083-1087 2eho d2ehod2 D:31-38,62-69,69-77,83-87 2q9q d2q9qe2 E:14-20,39-45,45-56,57-61 2eho d2ehoc2 C:14-20,39-45,45-56,57-61 2eho d2ehok2 K:14-20,39-45,45-56,57-61 2e9x d2e9xb2 B:14-20,39-45,45-56,57-61 2q9q d2q9qa2 A:14-20,39-45,45-56,57-61 2e9x d2e9xf2 F:14-20,41-45,45-56,57-61 2e9x d2e9xh2 H:169-177,200-208,207-218,219-223 2e9x d2e9xd2 D:169-177,200-208,211-218,219-223 51. c.117.1 Amidase signature (AS) enzymes Amidase signature (AS) enzymes possible duplication: the topologies of N- and C-terminal halves are similar; 3 layers: a/b/a; single mixed beta-sheet of 10 strands, order 213549A867 (A=10); strands from 5 to 9 are antiparallel to the rest 2g5h d2g5ha1 A:188-193,211-218,219-231,436-447 2dqn d2dqna1 A:188-193,211-218,219-231,436-447 2g5i d2g5ia1 A:188-195,211-218,219-231,435-447 2f2a d2f2aa1 A:188-195,211-218,219-231,435-447 2df4 d2df4a1 A:188-193,211-218,219-231,436-447 1m22 d1m22b_ B:236-243,259-266,267-279,480-492 1m22 d1m22a_ A:236-243,259-266,267-279,480-492 1mt5 d1mt5e_ E:251-256,278-285,286-299,502-512 1m21 d1m21a_ A:236-241,259-266,267-279,481-492 1m21 d1m21b_ B:236-241,259-266,267-279,481-492 1mt5 d1mt5j_ J:251-256,278-285,286-299,502-512 1mt5 d1mt5m_ M:251-256,278-285,286-299,502-512 1mt5 d1mt5b_ B:251-256,278-285,286-299,502-512 1mt5 d1mt5d_ D:251-256,278-285,286-299,502-513 2gi3 d2gi3a1 A:175-180,198-205,206-218,420-431 1mt5 d1mt5n_ N:251-256,278-285,286-299,502-512 1mt5 d1mt5i_ I:251-256,278-285,286-299,502-513 1mt5 d1mt5h_ H:251-256,278-285,286-299,502-513 1mt5 d1mt5a_ A:251-256,278-285,286-299,502-513 1mt5 d1mt5o_ O:251-256,278-285,286-299,502-513 1mt5 d1mt5f_ F:251-256,278-285,286-299,502-513 1mt5 d1mt5g_ G:251-256,278-285,286-299,502-513 1mt5 d1mt5k_ K:251-256,278-285,286-299,502-513 1mt5 d1mt5p_ P:251-256,278-285,286-299,502-513 1o9n d1o9nb_ B:165-170,188-195,196-209,370-381 1o9p d1o9pb_ B:165-170,188-195,196-209,370-381 1mt5 d1mt5c_ C:251-256,278-285,286-299,502-513 1ocl d1oclb_ B:165-170,188-195,196-209,370-381 1o9q d1o9qb_ B:165-170,188-195,196-209,370-381 1och d1ochb_ B:165-170,188-195,196-209,370-381 1o9o d1o9ob_ B:165-170,188-195,196-209,370-381 1ocm d1ocma_ A:165-170,188-195,196-209,370-381 1obj d1obja_ A:165-170,188-195,196-209,370-381 1o9o d1o9oa_ A:165-171,188-195,196-209,369-381 1ocm d1ocmb_ B:165-170,188-195,196-209,370-381 1obj d1objb_ B:165-170,188-195,196-209,370-381 1o9n d1o9na_ A:165-170,188-195,196-209,370-381 1ock d1ocka_ A:165-170,188-195,196-209,370-381 1mt5 d1mt5l_ L:251-256,278-285,286-299,502-513 1obl d1oblb_ B:165-171,188-195,196-209,369-381 1o9p d1o9pa_ A:165-171,188-195,196-209,369-381 1obk d1obka_ A:165-171,188-195,196-209,369-381 1och d1ocha_ A:165-171,188-195,196-209,369-381 1ocl d1ocla_ A:165-171,188-195,196-209,369-381 1obi d1obia_ A:165-171,188-195,196-209,369-381 1ock d1ockb_ B:165-170,188-195,196-209,370-381 1o9q d1o9qa_ A:165-171,188-195,196-209,369-381 1obi d1obib_ B:165-171,188-195,196-209,369-381 1obl d1obla_ A:165-170,188-195,196-209,370-381 1obk d1obkb_ B:165-170,188-195,196-209,370-381 53. d.382.1 PSTPO5379-like PSTPO5379-like complex fold; consists of two alpha+beta subdomains, one is inserted in the other 2pif d2pifa1 A:91-97,98-105,106-115,246-252 2pif d2pifb1 B:91-97,98-105,106-115,246-252 2pif d2pifa1 A:38-47,116-123,232-244,246-252 2pif d2pifb1 B:37-47,116-123,232-244,246-252 2pif d2pifb1 B:37-47,116-123,232-244,256-260 54. d.142.1 Glutathione synthetase ATP-binding domain-like ATP-grasp Consists of two subdomains with different alpha+beta folds ! shares functional and structural similarities with the PIPK and protein kinase superfamilies 1scu d1scue2 E:42-48,59-64,65-77,95-101 1cqi d1cqie2 E:42-48,59-64,65-77,95-101 1cqi d1cqib2 B:42-48,59-64,65-77,95-101 1m6v d1m6vc5 C:164-171,178-184,184-200,203-209 1kj8 d1kj8b3 B:151-157,164-169,170-182,191-197 2scu d2scue2 E:42-48,59-64,65-77,95-101 1kjq d1kjqb3 B:150-157,164-170,170-184,191-197 2nu9 d2nu9g2 G:42-48,59-64,65-77,95-101 2nu9 d2nu9e2 E:42-48,59-64,65-77,95-101 2nu9 d2nu9b2 B:42-48,59-64,65-77,95-101 2scu d2scub2 B:42-48,59-64,65-77,95-101 1scu d1scub2 B:42-48,59-64,65-77,95-101 2nu9 d2nu9i2 I:42-48,59-64,65-77,95-101 1m6v d1m6ve5 E:164-171,178-184,184-200,203-209 1kjj d1kjjb3 B:151-157,164-169,170-183,191-197 1kjj d1kjja3 A:150-157,164-170,170-184,191-197 1cs0 d1cs0c5 C:164-171,178-184,184-200,203-209 1c3o d1c3oe5 E:164-171,178-184,184-200,203-209 1cqj d1cqje2 E:42-48,59-64,65-77,95-101 1kj8 d1kj8a3 A:150-157,164-170,170-184,191-197 1cqj d1cqjb2 B:42-48,59-64,65-77,95-101 1jdb d1jdbe5 E:163-170,177-183,183-199,202-208 1t36 d1t36c5 C:164-171,178-184,184-200,203-209 1kj9 d1kj9a3 A:150-157,164-170,170-184,191-197 1a9x d1a9xe5 E:4164-4171,4178-4184,4184-4200,4203-4209 2nu6 d2nu6e2 E:42-48,59-64,65-77,95-101 1c30 d1c30g5 G:164-171,178-184,184-200,203-209 2nu6 d2nu6b2 B:42-48,59-64,65-77,95-101 1m6v d1m6vg5 G:164-171,178-184,184-200,203-209 1kee d1keec5 C:164-171,178-184,184-200,203-209 1t36 d1t36g5 G:164-171,178-184,184-200,203-209 1c3o d1c3oc5 C:164-171,178-184,184-200,203-209 2nua d2nuab2 B:42-48,59-64,65-77,95-101 2nua d2nuae2 E:42-48,59-64,65-77,95-101 1t36 d1t36a5 A:164-171,178-184,184-200,203-209 1c30 d1c30a5 A:164-171,178-184,184-200,203-209 1jll d1jlle2 E:42-48,59-64,65-77,95-101 1jkj d1jkjb2 B:42-48,59-64,65-77,95-101 1c3o d1c3oa5 A:164-171,178-184,184-200,203-209 1jll d1jllb2 B:42-48,59-64,65-77,95-101 2nu7 d2nu7e2 E:42-48,59-64,65-77,95-101 1c3o d1c3og5 G:164-171,178-184,184-200,203-209 1ce8 d1ce8a5 A:164-171,178-184,184-200,203-209 1kee d1keee5 E:164-171,178-184,184-200,203-209 2nu8 d2nu8e2 E:42-48,59-64,65-77,95-101 2nu7 d2nu7b2 B:42-48,59-64,65-77,95-101 1bxr d1bxrg5 G:164-171,178-184,184-200,203-209 1a9x d1a9xg5 G:6164-6171,6178-6184,6184-6200,6203-6209 1jkj d1jkje2 E:42-48,59-64,65-77,95-101 1kee d1keeg5 G:164-171,178-184,184-200,203-209 2nu8 d2nu8b2 B:42-48,59-64,65-77,95-101 1a9x d1a9xa5 A:164-171,178-184,184-200,203-209 1cs0 d1cs0g5 G:164-171,178-184,184-200,203-209 1m6v d1m6va5 A:164-171,178-184,184-200,203-209 1bxr d1bxrc5 C:164-171,178-184,184-200,203-209 1ce8 d1ce8g5 G:164-171,178-184,184-200,203-209 1kee d1keea5 A:164-171,178-184,184-200,203-209 2r85 d2r85a2 A:127-134,141-147,147-160,169-175 1jdb d1jdbh5 H:163-170,177-183,183-199,202-208 1w96 d1w96a3 A:247-255,261-267,267-283,285-292 1jdb d1jdbk5 K:163-170,177-183,183-199,202-208 1cs0 d1cs0a5 A:164-171,178-184,184-200,203-209 1w96 d1w96b3 B:247-255,261-267,267-283,285-292 1a9x d1a9xc5 C:2164-2171,2178-2184,2184-2200,2203-2209 1vkz d1vkzb3 B:130-137,144-150,150-164,173-178 1jde d1jdea3 A:88-95,104-110,199-217,235-242 1w96 d1w96c3 C:247-255,261-267,267-283,285-292 2fpi d2fpib2 B:42-48,66-71,72-85,102-108 2r87 d2r87f2 F:127-134,141-147,147-160,169-175 1eud d1eudb2 B:42-48,66-71,72-84,102-108 1dik d1dika3 A:88-95,104-110,199-217,235-242 1euc d1eucb2 B:42-48,66-71,72-84,102-108 2r87 d2r87b2 B:127-134,141-147,147-160,169-175 1bxr d1bxra5 A:164-171,178-184,184-200,203-209 1vkz d1vkza3 A:130-137,144-150,150-164,173-178 2fpp d2fppb2 B:42-48,66-71,72-84,102-108 2fpg d2fpgb2 B:42-48,66-71,72-85,102-108 1kbl d1kbla3 A:88-95,104-110,199-217,235-242 2dik d2dika3 A:88-95,104-110,199-217,235-242 1kc7 d1kc7a3 A:88-95,104-110,199-217,235-242 2fp4 d2fp4b2 B:42-48,66-71,72-85,102-108 2r82 d2r82a3 A:88-95,104-110,199-217,235-242 1ggo d1ggoa3 A:88-95,104-110,199-217,235-242 1kbl d1kbla3 A:250-259,266-275,277-284,319-328 1auv d1auva2 A:264-271,278-284,284-299,300-307 2gpw d2gpwb3 B:154-161,168-174,174-191,197-203 1auv d1auvb2 B:264-271,278-284,284-299,300-307 2r87 d2r87a2 A:128-134,141-146,147-160,169-175 1kc7 d1kc7a3 A:250-259,266-275,277-284,319-328 1kji d1kjia3 A:150-157,164-170,170-185,191-197 1ce8 d1ce8c6 C:710-716,724-730,730-741,750-755 1kjq d1kjqa3 A:150-157,164-170,170-185,191-197 1m6v d1m6vg6 G:710-716,724-730,730-741,750-755 1ce8 d1ce8g6 G:710-716,724-730,730-741,750-755 1cs0 d1cs0g6 G:710-716,724-730,730-741,750-755 1kee d1keec6 C:710-716,724-730,730-741,750-755 2j9g d2j9ga3 A:154-161,168-174,174-190,197-203 1px2 d1px2b2 B:264-271,278-284,284-299,300-307 1kee d1keeg6 G:710-716,724-730,730-741,750-755 1pk8 d1pk8b2 B:264-271,278-284,284-299,300-307 1i7l d1i7la2 A:265-272,279-285,285-300,301-308 1i7n d1i7na2 A:265-272,279-285,285-300,301-308 2r82 d2r82a3 A:250-259,266-275,277-284,319-328 1ez1 d1ez1a3 A:150-157,164-170,170-185,191-197 1c3o d1c3og6 G:710-716,724-730,730-741,750-755 1aux d1auxb2 B:264-271,278-284,284-299,300-307 1a9x d1a9xa6 A:710-716,724-730,730-741,750-755 1pk8 d1pk8f2 F:264-271,278-284,284-299,300-307 1pk8 d1pk8g2 G:264-271,278-284,284-299,300-307 1c30 d1c30a6 A:710-716,724-730,730-741,750-755 1eyz d1eyza3 A:150-157,164-170,170-185,191-197 1aux d1auxa2 A:264-271,278-284,284-299,300-307 1pk8 d1pk8c2 C:264-271,278-284,284-299,300-307 1pk8 d1pk8h2 H:264-271,278-284,284-299,300-307 1i7l d1i7lb2 B:265-272,279-285,285-300,301-308 1m6v d1m6ve6 E:710-716,724-730,730-741,750-755 1cs0 d1cs0a6 A:710-716,724-730,730-741,750-755 1ce8 d1ce8e5 E:164-171,179-184,184-200,203-209 1ce8 d1ce8e6 E:710-716,724-730,730-741,750-755 2r87 d2r87e2 E:128-134,141-146,147-160,169-175 1kee d1keee6 E:710-716,724-730,730-741,750-755 1kee d1keea6 A:710-716,724-730,730-741,750-755 1ce8 d1ce8c5 C:165-171,178-183,184-200,203-209 1c30 d1c30c6 C:710-716,724-730,730-741,750-755 1pk8 d1pk8a2 A:264-271,278-284,284-299,300-307 1a9x d1a9xc6 C:2710-2716,2724-2730,2730-2741,2750-2755 1c3o d1c3oa6 A:710-716,724-730,730-741,750-755 1pk8 d1pk8d2 D:264-271,278-284,284-299,300-307 1c30 d1c30e6 E:710-716,724-730,730-741,750-755 1pk8 d1pk8e2 E:264-271,278-284,284-299,300-307 1c3o d1c3oc6 C:710-716,724-730,730-741,750-755 1gso d1gsoa3 A:140-146,154-160,160-173,183-189 1i7n d1i7nb2 B:265-272,279-285,285-300,301-308 1a9x d1a9xg6 G:6710-6716,6724-6730,6730-6741,6750-6755 1c30 d1c30c5 C:165-171,178-183,184-200,203-209 1cs0 d1cs0c6 C:710-716,724-730,730-741,750-755 1c3o d1c3oe6 E:710-716,724-730,730-741,750-755 2r87 d2r87c2 C:128-134,141-146,147-160,169-175 1px2 d1px2a2 A:264-271,278-284,284-299,300-307 1t36 d1t36e5 E:165-171,178-183,184-200,203-209 1t36 d1t36a6 A:710-716,724-730,730-741,750-755 1w93 d1w93a3 A:247-254,261-267,267-283,286-292 1t36 d1t36e6 E:710-716,724-730,730-741,750-755 1c30 d1c30g6 G:710-716,724-730,730-741,750-755 1a9x d1a9xe6 E:4710-4716,4724-4730,4730-4741,4750-4755 2r87 d2r87d2 D:128-134,141-146,147-160,169-175 1jdb d1jdbb5 B:164-170,177-182,183-199,202-208 1cs0 d1cs0e6 E:710-716,724-730,730-741,750-755 2dln d2dlna2 A:139-146,153-159,159-175,176-182 1cs0 d1cs0e5 E:165-171,178-183,184-200,203-209 1jde d1jdea3 A:251-259,263-275,277-285,319-328 1iow d1iowa2 A:139-146,153-159,159-175,176-182 2vr1 d2vr1a3 A:154-161,168-174,174-194,197-203 1gsa d1gsaa2 A:155-161,169-175,179-189,194-200 1dv2 d1dv2a3 A:154-161,168-174,174-194,197-203 1t36 d1t36g6 G:710-716,724-730,730-741,750-755 1c30 d1c30e5 E:165-171,179-183,184-200,203-209 2gpw d2gpwa3 A:154-161,169-174,174-193,197-203 1dik d1dika3 A:251-259,266-275,277-285,319-328 1dv1 d1dv1b3 B:154-159,169-174,174-187,199-203 1dv2 d1dv2b3 B:155-161,168-173,174-194,197-203 2gps d2gpsb3 B:154-161,168-174,177-194,197-203 2gpw d2gpwc3 C:154-161,168-174,177-194,197-203 2gpw d2gpwd3 D:154-161,168-174,177-194,197-203 2r84 d2r84a2 A:127-133,141-147,147-160,170-175 1kji d1kjib3 B:151-157,164-169,170-187,191-197 1ulz d1ulza3 A:152-160,167-172,172-191,193-201 1vbh d1vbha3 A:93-100,110-115,202-220,238-245 1iov d1iova2 A:139-146,153-159,159-175,176-182 1glv d1glva2 A:155-161,170-175,177-189,194-200 1b6s d1b6sb3 B:116-122,130-135,135-143,149-155 1bxr d1bxre5 E:165-171,179-183,184-200,203-209 1ggo d1ggoa3 A:250-259,263-275,277-285,319-328 1gsh d1gsha2 A:155-161,170-175,177-189,194-200 2glt d2glta2 A:155-161,170-175,177-189,194-200 1vbg d1vbga3 A:93-100,110-115,202-220,238-245 2r85 d2r85b2 B:128-133,141-146,147-160,170-175 1ehi d1ehib2 B:576-582,589-594,595-611,611-618 3etj d3etja3 A:116-122,130-135,135-143,149-155 2dik d2dika3 A:250-259,266-275,277-285,319-328 2gps d2gpsa3 A:154-161,169-174,174-194,197-203 2r86 d2r86b2 B:128-133,141-146,147-159,170-175 2r7k d2r7ka2 A:152-157,165-170,171-186,196-201 2r7m d2r7ma2 A:152-157,165-170,171-186,196-201 1ehi d1ehia2 A:176-182,189-194,195-211,212-218 1b6s d1b6sd3 D:116-122,130-135,135-143,149-155 3eth d3etha3 A:116-122,130-135,135-143,149-155 1jdb d1jdbk6 K:709-715,723-729,729-740,748-754 1b6r d1b6ra3 A:116-122,130-135,135-143,149-155 3eth d3ethb3 B:116-122,130-135,135-143,149-155 1b6s d1b6sc3 C:116-122,130-135,135-143,149-155 1m6v d1m6va6 A:710-716,725-730,730-741,750-755 1t36 d1t36c6 C:710-716,725-730,730-741,750-755 1b6s d1b6sa3 A:116-122,130-135,135-143,149-155 2r86 d2r86a2 A:128-133,142-146,147-160,170-175 1m6v d1m6vc6 C:710-716,725-730,730-741,750-755 1ce8 d1ce8a6 A:710-716,725-730,730-741,750-755 1m0w d1m0wb2 B:1377-1384,1390-1395,1394-1405,1411-1417 1e4e d1e4ea2 A:166-173,180-186,186-202,202-209 2r7l d2r7la2 A:152-157,165-170,171-186,197-201 2r84 d2r84b2 B:128-132,142-146,147-156,171-175 1e4e d1e4eb2 B:166-173,180-186,186-202,202-209 2r7n d2r7na2 A:152-156,166-170,171-186,197-201 1m0w d1m0wa2 A:377-384,391-395,394-405,411-417 1ez1 d1ez1b3 B:151-157,164-169,173-185,191-197 1jdb d1jdbe6 E:709-714,724-729,729-740,749-754 1bxr d1bxrc6 C:710-717,725-730,737-746,749-755 1jdb d1jdbh6 H:709-714,724-729,729-740,749-754 1uc9 d1uc9a2 A:124-129,139-144,144-154,165-171 1jdb d1jdbb6 B:709-714,724-729,729-740,749-754 1kj9 d1kj9b3 B:151-157,164-169,173-185,191-197 1uc9 d1uc9b2 B:124-129,139-144,144-152,165-171 1eyz d1eyzb3 B:151-157,164-169,173-185,191-197 1bxr d1bxra6 A:711-717,725-729,737-746,749-755 1bxr d1bxrg6 G:711-717,725-729,737-746,749-755 1bxr d1bxre6 E:711-717,725-729,737-746,749-755 1jde d1jdea3 A:88-95,104-110,125-145,235-242 1kc7 d1kc7a3 A:88-95,104-110,125-146,235-242 1kbl d1kbla3 A:88-95,104-110,125-146,235-242 2dik d2dika3 A:88-95,104-110,125-145,235-242 1ggo d1ggoa3 A:88-95,104-110,125-145,235-242 1dik d1dika3 A:88-95,104-110,125-145,235-242 2fpi d2fpib2 B:55-61,62-66,72-85,86-90 2fpg d2fpgb2 B:55-61,62-66,72-85,86-90 2io9 d2io9b3 B:313-323,324-333,338-354,578-589 2io8 d2io8a3 A:313-323,324-333,338-354,578-589 2ioa d2ioaa3 A:313-323,324-333,337-354,578-589 2ioa d2ioab3 B:313-323,324-333,337-354,578-589 55. d.58.4 Dimeric alpha+beta barrel dimerizes through the beta-sheet; forms beta-sheet barrel, closed (n=8, S=12); dimers may assemble in higher oligomers ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1y0h d1y0ha_ A:4-13,52-61,61-71,89-99 1s7i d1s7ia_ A:7-16,82-92,94-105,111-118 1i1g d1i1ga2 A:63-73,101-109,110-125,127-136 2e1c d2e1ca2 A:86-96,124-132,133-147,149-158 2od4 d2od4a1 A:8-17,54-63,64-87,86-96 1ri7 d1ri7a2 A:86-96,124-132,133-147,149-158 2d3q d2d3qa1 A:22-32,118-126,127-143,145-156 2cyy d2cyya2 A:66-76,104-112,113-127,129-138 2q3p d2q3pa1 A:10-19,64-72,73-83,97-106 1mwq d1mwqa_ A:1-10,55-65,67-78,85-98 1mli d1mlii_ I:1-10,51-58,60-71,76-86 1mli d1mlig_ G:1-10,51-58,60-71,76-86 1mli d1mlih_ H:1-10,51-58,60-71,76-86 1mli d1mlif_ F:1-10,51-58,60-71,76-86 1mli d1mlib_ B:1-10,51-58,60-71,76-86 1mli d1mlie_ E:1-10,51-58,60-71,76-86 1mli d1mlic_ C:1-10,51-58,60-71,76-86 1mli d1mlid_ D:1-10,51-58,60-71,76-86 1mli d1mlia_ A:1-10,51-58,60-71,76-86 1mli d1mlij_ J:1-10,51-58,60-71,76-86 2od4 d2od4b1 B:7-17,54-64,64-76,86-96 2omo d2omoa1 A:0-11,48-57,58-68,86-94 1q4r d1q4ra_ A:10-20,64-72,73-83,96-106 1mwq d1mwqb_ B:1-10,55-65,67-78,85-98 2omo d2omob1 B:0-11,48-57,58-68,86-94 2omo d2omoh1 H:0-11,48-57,58-68,86-94 1i1g d1i1gb2 B:63-73,101-109,110-126,127-136 2cfx d2cfxg2 G:64-74,102-110,111-126,125-137 2d3q d2d3qb1 B:22-32,118-126,127-143,145-156 2cfx d2cfxd2 D:64-74,102-110,111-126,125-137 2hag d2haga1 A:19-29,101-109,110-126,128-139 1si9 d1si9b_ B:8-17,64-72,73-83,97-107 2cg4 d2cg4a2 A:67-76,106-114,115-131,133-143 2iiz d2iiza1 A:19-29,101-109,110-126,128-139 2omo d2omod1 D:-1-11,48-57,58-68,86-94 2gvk d2gvka1 A:22-32,107-115,116-132,134-145 2pgc d2pgcc1 C:113-122,162-170,171-185,195-206 2pgc d2pgce1 E:113-122,162-170,171-185,195-206 2pd1 d2pd1b1 B:3-13,48-57,58-68,86-94 2pgc d2pgcb1 B:113-122,162-170,171-185,195-206 2pgc d2pgca1 A:113-122,162-170,171-185,195-206 1t0t d1t0ty_ Y:139-149,196-204,205-220,225-237 1t0t d1t0tx_ X:139-149,196-204,205-220,225-237 2cfx d2cfxa2 A:64-74,102-110,111-126,125-137 1tr0 d1tr0c_ C:8-17,64-72,73-83,97-108 2cfx d2cfxh2 H:64-74,102-110,111-126,125-137 1tr0 d1tr0t_ T:8-17,64-72,73-83,97-108 1t0t d1t0tv_ V:139-149,196-204,205-220,225-237 1tr0 d1tr0r_ R:8-17,64-72,73-83,97-108 1tr0 d1tr0d_ D:8-17,64-72,73-83,97-108 2pgc d2pgcd1 D:113-122,162-170,171-185,195-206 1tr0 d1tr0f_ F:8-17,64-72,73-83,97-108 1tr0 d1tr0l_ L:8-17,64-72,73-83,97-108 1t0t d1t0tw_ W:139-149,196-204,205-220,225-237 1tr0 d1tr0o_ O:8-17,64-72,73-83,97-108 1tr0 d1tr0u_ U:8-17,64-72,73-83,97-108 1tr0 d1tr0x_ X:8-17,64-72,73-83,97-108 2cfx d2cfxe2 E:64-74,102-110,111-126,125-137 2od4 d2od4b1 B:7-17,54-64,75-86,86-96 1t0t d1t0tz_ Z:139-149,196-204,205-220,225-237 1tr0 d1tr0g_ G:8-17,64-72,73-83,97-108 1tr0 d1tr0w_ W:8-17,64-72,73-83,97-108 2cfx d2cfxf2 F:64-74,102-110,111-126,125-137 1tr0 d1tr0v_ V:8-17,64-72,73-83,97-108 1tr0 d1tr0b_ B:8-17,64-72,73-83,97-108 1tr0 d1tr0e_ E:8-17,64-72,73-83,97-108 1tr0 d1tr0a_ A:8-17,64-72,73-83,97-108 1tr0 d1tr0s_ S:8-17,64-72,73-83,97-108 2omo d2omoc1 C:0-11,48-57,58-68,86-94 1tr0 d1tr0y_ Y:8-17,64-72,73-83,97-108 2ftr d2ftrb1 B:6-16,58-68,69-79,96-105 1tr0 d1tr0j_ J:8-17,64-72,73-83,97-108 1tr0 d1tr0n_ N:8-17,64-72,73-83,97-108 1tr0 d1tr0m_ M:8-17,64-72,73-83,97-108 1y0h d1y0hb_ B:5-13,52-60,61-71,89-99 1tr0 d1tr0i_ I:8-17,64-72,73-83,97-108 1tr0 d1tr0h_ H:8-17,64-72,73-83,97-108 2cfx d2cfxb2 B:64-74,102-110,111-126,125-137 1tr0 d1tr0p_ P:8-17,64-72,73-83,97-108 2pd1 d2pd1a1 A:3-13,48-57,58-68,86-94 1si9 d1si9a_ A:8-17,64-72,73-83,97-108 1tr0 d1tr0k_ K:8-17,64-72,73-83,97-108 2asy d2asyb1 B:2-11,48-57,58-78,81-85 2cfx d2cfxc2 C:64-74,102-110,111-126,125-137 2op5 d2op5f1 F:8-17,61-70,71-91,99-109 2pd1 d2pd1d1 D:3-13,48-57,58-68,86-94 2asy d2asya1 A:2-11,48-57,58-78,81-85 2omo d2omog1 G:0-11,48-57,58-68,86-95 1vdh d1vdhd_ D:140-150,197-205,206-221,226-238 1vdh d1vdha_ A:140-150,197-205,206-221,226-238 2fiu d2fiub1 B:2-12,52-61,61-71,85-95 1vdh d1vdhc_ C:140-150,197-205,206-221,226-238 1vdh d1vdhb_ B:140-150,197-205,206-221,226-238 1vdh d1vdhe_ E:140-150,197-205,206-221,226-238 2fiu d2fiub1 B:2-12,52-61,71-85,85-95 1q53 d1q53b_ B:11-20,64-70,73-83,96-106 1q53 d1q53a_ A:11-20,64-71,73-83,96-106 2op5 d2op5c1 C:8-17,61-70,71-87,98-109 2hiq d2hiqa1 A:9-18,54-64,65-84,88-96 2ftr d2ftra1 A:5-16,58-67,69-79,96-106 1si9 d1si9c_ C:8-18,64-72,73-83,96-108 2ftr d2ftrb1 B:6-16,58-68,79-94,96-105 2hiq d2hiqb1 B:9-18,54-64,65-84,88-96 1t0t d1t0tw_ W:7-21,69-77,78-93,97-111 1q53 d1q53b_ B:11-20,64-70,83-97,96-106 2op5 d2op5b1 B:8-18,61-70,71-91,98-109 2op5 d2op5a1 A:8-17,61-70,71-87,99-109 1r6y d1r6ya_ A:1-11,58-67,68-78,91-101 1t0t d1t0tz_ Z:7-21,69-77,78-93,97-111 1t0t d1t0ty_ Y:7-21,69-77,78-93,97-111 1t0t d1t0tx_ X:7-21,69-77,78-93,97-111 1t0t d1t0tv_ V:7-21,69-77,78-93,97-111 2pd1 d2pd1c1 C:3-13,48-57,58-68,88-94 1rjj d1rjjb_ B:4-14,57-65,66-77,90-101 1rjj d1rjja_ A:4-14,57-65,66-77,90-101 2go8 d2go8a1 A:11-22,57-66,67-78,93-104 1tuv d1tuva_ A:1-11,58-67,68-78,91-101 2cg4 d2cg4b2 B:67-77,106-114,115-131,132-143 2fiu d2fiua1 A:2-13,52-61,71-85,84-95 1xbw d1xbwa_ A:2-12,49-59,60-70,90-102 2fiu d2fiua1 A:2-13,52-61,61-71,84-95 1wd6 d1wd6a_ A:2-11,47-57,58-77,81-89 2ifx d2ifxb1 B:1-10,62-70,81-95,96-105 1vqy d1vqye1 E:1-10,49-58,59-73,87-98 1q53 d1q53a_ A:11-20,64-71,83-97,96-106 2pgc d2pgca1 A:4-15,55-63,64-78,89-101 1xbw d1xbwd_ D:2-12,49-59,60-70,90-102 2op5 d2op5e1 E:8-18,61-70,71-91,98-109 2op5 d2op5d1 D:8-18,61-70,71-87,98-109 1vqy d1vqyc1 C:1-10,49-58,59-73,87-98 2pgc d2pgcc1 C:4-15,55-63,64-78,89-101 1vqy d1vqyb1 B:1-10,49-58,59-73,87-98 2pgc d2pgcd1 D:4-15,53-63,64-78,89-101 2od6 d2od6c1 C:4-14,58-68,68-86,96-109 2pgc d2pgcb1 B:4-15,53-63,64-78,89-101 1vqy d1vqyh1 H:1-10,49-58,59-73,87-98 1vqy d1vqya1 A:1-10,49-58,59-73,87-98 1vqy d1vqyd1 D:1-10,49-58,59-73,87-98 2pgc d2pgce1 E:4-15,53-63,64-78,89-101 2od6 d2od6d1 D:4-14,58-68,68-87,96-109 1iuj d1iuja_ A:1-9,49-57,58-68,90-101 2q3p d2q3pa1 A:10-19,64-72,83-97,97-106 1q4r d1q4ra_ A:10-20,64-72,83-97,96-106 2hag d2haga1 A:176-188,251-262,263-277,289-302 2omo d2omof1 F:1-11,48-57,58-68,86-94 1x7v d1x7va_ A:4-14,51-60,61-71,84-94 1si9 d1si9b_ B:8-17,64-72,83-97,97-107 2od6 d2od6b1 B:4-14,58-68,68-87,96-109 1vqy d1vqyf1 F:1-10,49-58,59-74,87-98 1vqy d1vqyg1 G:1-10,49-58,59-74,87-98 1iuj d1iujb_ B:1-9,49-57,58-68,90-101 1tr0 d1tr0y_ Y:8-17,64-72,83-97,97-108 2od6 d2od6a1 A:4-14,58-68,68-87,96-109 1rjj d1rjja_ A:4-14,57-65,76-91,90-101 1rjj d1rjjb_ B:4-14,57-65,76-91,90-101 1tr0 d1tr0a_ A:8-17,64-72,83-97,97-108 1tr0 d1tr0h_ H:8-17,64-72,83-97,97-108 1tr0 d1tr0j_ J:8-17,64-72,83-97,97-108 1tr0 d1tr0n_ N:8-17,64-72,83-97,97-108 1tr0 d1tr0x_ X:8-17,64-72,83-97,97-108 1tr0 d1tr0e_ E:8-17,64-72,83-97,97-108 1tr0 d1tr0w_ W:8-17,64-72,83-97,97-108 1q8b d1q8ba_ A:12-23,61-70,71-82,92-104 1tr0 d1tr0d_ D:8-17,64-72,83-97,97-108 1tr0 d1tr0u_ U:8-17,64-72,83-97,97-108 2iiz d2iiza1 A:176-188,251-262,263-277,289-302 2d3q d2d3qb1 B:214-226,352-361,362-378,419-432 1tr0 d1tr0t_ T:8-17,64-72,83-97,97-108 1tr0 d1tr0f_ F:8-17,64-72,83-97,97-108 1tr0 d1tr0b_ B:8-17,64-72,83-97,97-108 1tr0 d1tr0m_ M:8-17,64-72,83-97,97-108 1tr0 d1tr0k_ K:8-17,64-72,83-97,97-108 1tr0 d1tr0g_ G:8-17,64-72,83-97,97-108 1tr0 d1tr0c_ C:8-17,64-72,83-97,97-108 2ftr d2ftra1 A:5-16,58-67,79-94,96-106 1sqe d1sqea_ A:17-27,64-74,75-85,107-119 1vdh d1vdhd_ D:9-25,73-81,82-96,101-117 2pgc d2pgce1 E:113-122,162-170,185-195,195-206 1vdh d1vdha_ A:9-25,73-81,82-96,101-117 1vdh d1vdhb_ B:9-25,73-81,82-96,101-117 1vdh d1vdhc_ C:9-25,73-81,82-96,101-117 2pgc d2pgca1 A:113-122,162-170,185-196,195-206 2pgc d2pgcd1 D:113-122,162-170,185-196,195-206 1tz0 d1tz0b_ B:3-15,50-62,62-72,90-102 2pgc d2pgcb1 B:113-122,162-170,185-195,195-206 2pgc d2pgcc1 C:113-122,162-170,185-195,195-206 2omo d2omoe1 E:1-11,48-57,58-68,86-95 1xbw d1xbwc_ C:2-13,48-59,60-70,90-102 2cb2 d2cb2a1 A:4-15,70-81,82-94,112-120 1vdh d1vdhe_ E:9-25,73-81,82-96,101-117 1x8d d1x8dd1 D:1-10,49-59,60-70,93-97 2zdp d2zdpb1 B:0-12,47-59,59-69,91-103 1vqs d1vqse_ E:1-11,49-58,59-74,86-96 1x7v d1x7vc_ C:4-14,51-60,61-71,84-96 2zdp d2zdpa1 A:0-12,47-59,59-69,91-103 1x7v d1x7vb_ B:4-14,51-60,61-71,84-96 1xbw d1xbwb_ B:2-13,48-59,60-69,90-102 1tz0 d1tz0c_ C:3-15,50-61,62-72,90-102 2ifx d2ifxb1 B:1-10,62-70,71-81,96-105 2cb2 d2cb2a1 A:159-169,245-255,256-271,284-299 1sqe d1sqeb_ B:17-28,63-74,75-85,107-119 2pd1 d2pd1b1 B:3-13,48-57,68-78,86-94 2ap6 d2ap6a1 A:1-11,49-58,59-74,86-98 2ap6 d2ap6e1 E:1-11,49-58,59-74,86-98 2ap6 d2ap6h1 H:1-11,49-58,59-74,86-98 2ap6 d2ap6d1 D:1-11,49-58,59-74,86-98 2ap6 d2ap6f1 F:1-11,49-58,59-74,86-98 2ap6 d2ap6g1 G:1-11,49-58,59-74,86-98 2ap6 d2ap6b1 B:1-11,49-58,59-74,86-98 2ap6 d2ap6c1 C:1-11,49-58,59-74,86-98 1vqs d1vqsc_ C:1-11,49-58,59-74,86-98 1tz0 d1tz0a_ A:3-15,50-62,62-72,90-102 1vqs d1vqsb_ B:1-11,49-58,59-74,86-98 1vqs d1vqsa_ A:1-11,49-58,59-74,86-98 2op5 d2op5c1 C:8-17,61-70,87-99,98-109 1vqs d1vqsd_ D:1-11,49-58,59-74,86-98 2pd1 d2pd1d1 D:3-13,48-57,68-78,86-94 2pd1 d2pd1a1 A:3-13,48-57,68-78,86-94 1vqy d1vqyb1 B:1-10,49-58,79-88,87-98 1vqy d1vqyd1 D:1-10,49-58,79-88,87-98 1vqy d1vqye1 E:1-10,49-58,79-88,87-98 1r6y d1r6ya_ A:1-11,58-67,78-89,91-101 1vqy d1vqyf1 F:1-10,49-58,79-88,87-98 1tuv d1tuva_ A:1-11,58-67,78-89,91-101 2od6 d2od6c1 C:4-14,58-68,86-96,96-109 1vqy d1vqyc1 C:1-10,49-58,79-88,87-98 1vqy d1vqya1 A:1-10,49-58,79-88,87-98 2pgc d2pgcc1 C:4-15,55-63,78-88,89-101 1vqy d1vqyg1 G:1-10,49-58,79-88,87-98 1xbw d1xbwa_ A:2-12,49-59,70-80,90-102 1vqy d1vqyh1 H:1-10,49-58,79-88,87-98 2gvk d2gvka1 A:183-195,255-267,268-282,294-307 2od6 d2od6a1 A:4-14,58-68,86-97,96-109 2pgc d2pgca1 A:4-15,55-63,78-88,89-101 2pgc d2pgcb1 B:4-15,53-63,78-88,89-101 2ifx d2ifxa1 A:1-10,62-70,71-81,100-105 2pgc d2pgce1 E:4-15,53-63,78-88,89-101 2pgc d2pgcd1 D:4-15,53-63,78-88,89-101 2ap6 d2ap6e1 E:1-11,49-58,73-87,86-98 2ap6 d2ap6h1 H:1-11,49-58,73-87,86-98 2ap6 d2ap6b1 B:1-11,49-58,73-87,86-98 2ap6 d2ap6d1 D:1-11,49-58,73-87,86-98 2ap6 d2ap6g1 G:1-11,49-58,73-87,86-98 2ap6 d2ap6f1 F:1-11,49-58,73-87,86-98 2ap6 d2ap6c1 C:1-11,49-58,73-87,86-98 2ap6 d2ap6a1 A:1-11,49-58,73-87,86-98 2op5 d2op5d1 D:8-18,61-70,86-98,98-109 2cb2 d2cb2a1 A:159-169,245-255,270-284,284-299 2d3q d2d3qa1 A:214-226,352-361,365-378,419-432 2okq d2okqa1 A:2-13,63-74,75-89,106-117 2okq d2okqb1 B:2-13,63-74,75-90,106-117 1lq9 d1lq9b_ B:10-21,57-67,68-80,99-112 1n5v d1n5vb_ B:10-21,57-67,68-80,99-112 1n5t d1n5tb_ B:10-21,57-67,68-80,99-112 1n5s d1n5sb_ B:10-21,57-67,68-80,99-112 1n5q d1n5qb_ B:10-21,57-67,68-80,99-112 1n5q d1n5qa_ A:10-21,57-67,68-80,99-112 1lq9 d1lq9a_ A:10-21,57-67,68-80,99-112 1n5t d1n5ta_ A:10-21,57-67,68-80,99-112 1n5v d1n5va_ A:10-21,57-67,68-80,99-112 1n5s d1n5sa_ A:10-21,57-67,68-80,99-112 56. d.58.62 Ribosomal protein L10-like consists of globular N-terminal domain, structurally similar to NDK, and the L7/L12-binding C-terminal alpha-helical tail Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1zav d1zava1 A:21-28,82-88,91-107,112-119 1zax d1zaxa1 A:21-28,82-88,91-107,112-119 1zaw d1zawa1 A:21-28,82-88,91-107,114-119 57. d.308.1 THUMP domain-like predicted RNA-binding function ! THUMP domain contains mixed 8-stranded beta-sheet, folded into a half-barrel and covered with 4 helices on the outside; order 32148756; strands 5, 6 and 7 are parallel 1rki d1rkia1 A:2-10,40-47,47-58,63-71 1vbk d1vbkb2 B:2-8,49-55,57-69,72-82 1vbk d1vbka2 A:2-8,49-55,57-69,71-82 1rki d1rkib1 B:2-11,39-47,47-58,64-71 2c5s d2c5sa2 A:4-11,48-55,58-69,71-83 58. a.294.1 Tex N-terminal region-like Tex N-terminal region-like multihelical; irregular array of long and short helices; can be divided into several subdomains 3bzc d3bzca3 A:192-199,213-219,223-234,238-245 2oce d2ocea3 A:192-199,214-219,223-237,238-245 3bzk d3bzka3 A:192-199,214-219,223-237,238-245 59. d.139.1 PurM C-terminal domain-like PurM C-terminal domain-like 3 layers: alpha/beta/alpha; partial topological similarity to the ferredoxin-like fold 2hry d2hrya3 A:171-180,283-290,290-305,306-316 2hs3 d2hs3a3 A:171-180,283-290,290-305,306-316 3d54 d3d54a3 A:173-180,283-290,290-305,307-316 3d54 d3d54e3 E:173-180,283-290,290-305,307-316 1cli d1clid2 D:3177-3186,3301-3309,3309-3324,3326-3335 3d54 d3d54i3 I:173-180,283-290,290-305,307-316 1cli d1clib2 B:1177-1186,1301-1309,1309-1324,1326-1335 1cli d1clic2 C:2177-2186,2301-2309,2309-2324,2326-2336 1vk3 d1vk3a3 A:171-180,283-290,290-305,307-316 1cli d1clia2 A:177-186,301-309,309-324,326-336 1t3t d1t3ta6 A:432-440,549-556,556-571,573-582 2z1f d2z1fa2 A:163-171,275-281,281-295,299-307 2hs4 d2hs4a3 A:171-180,283-290,290-305,307-316 2hs0 d2hs0a3 A:171-180,283-290,290-305,307-316 2hru d2hrua3 A:171-180,283-290,290-305,307-316 2z1e d2z1ea2 A:163-171,275-281,281-295,299-308 1t3t d1t3ta7 A:823-832,924-933,932-947,951-960 2zod d2zodb2 B:162-170,295-303,309-318,321-328 2zod d2zoda2 A:162-170,295-303,309-318,321-328 2zau d2zaub2 B:162-170,295-303,309-318,321-328 2yye d2yyeb2 B:162-170,295-303,309-318,321-328 2zau d2zauc2 C:162-170,295-303,309-318,321-328 2zau d2zaua2 A:162-170,295-303,309-318,321-328 60. d.285.1 DNA-binding domain of intron-encoded endonucleases DNA-binding domain of intron-encoded endonucleases beta(2)-alpha(2)-beta; 2 layers; 3-stranded antiparallel beta-sheet, order 213; HTH motif; also includes the extra N-terminal, DNA minor groove-binding helix 1u3e d1u3em2 M:121-128,130-137,137-146,165-171 1t2t d1t2ta_ A:203-208,209-214,214-223,239-243 1i3j d1i3ja_ A:203-208,209-214,214-223,239-243 1t2t d1t2ta_ A:203-208,209-214,225-236,239-243 1i3j d1i3ja_ A:203-208,209-214,225-235,239-243 61. d.226.1 GIY-YIG endonuclease GIY-YIG endonuclease beta(2)-alpha(2)-beta-alpha-(beta); strand 4 is very short; 3 layers; antiparallel (mixed) beta-sheet; order 312(4) 1ln0 d1ln0b_ B:2-12,13-23,23-38,55-63 1ln0 d1ln0a_ A:3-12,13-22,23-38,55-63 1mk0 d1mk0a_ A:2-12,13-23,23-38,55-64 1ln0 d1ln0b_ B:2-12,13-23,42-53,55-63 1ln0 d1ln0a_ A:3-12,13-22,42-53,55-63 1mk0 d1mk0a_ A:2-12,13-23,42-53,55-64 62. c.103.1 MTH938-like MTH938-like core: 3 layers, b+a/b/a ; the central mixed sheet of 5 strands: order 21534; strand 2 is antiparallel to the rest 2fi9 d2fi9a1 A:35-41,42-47,55-66,119-126 2cyj d2cyja1 A:20-26,28-33,49-60,109-116 1ihn d1ihnb_ B:29-35,37-42,58-69,112-120 1ihn d1ihna_ A:29-35,37-42,58-69,112-120 2ab1 d2ab1b1 B:24-30,31-36,50-61,113-120 2ab1 d2ab1a1 A:24-30,31-36,50-61,113-120 2q4q d2q4qa1 A:24-30,31-36,50-61,113-120 2fvt d2fvta1 A:33-39,40-45,58-65,118-126 2q4q d2q4qb1 B:24-30,31-35,50-61,113-120 63. d.15.2 CAD & PB1 domains contain extra helix; similar heterodimerization modes; possibly related to the ubiquitin-like superfamily ! beta-Grasp (ubiquitin-like) core: beta(2)-alpha-beta(2); mixed beta-sheet 2143 1pqs d1pqsa_ A:816-821,823-828,830-845,847-854 1wmh d1wmhb_ B:57-64,66-71,73-83,87-94 1oey d1oeyl_ L:282-290,292-297,299-310,323-329 2o2v d2o2vb1 B:81-88,89-94,96-111,115-122 2c60 d2c60a1 A:81-88,89-94,96-111,115-122 1tz1 d1tz1a1 A:816-821,823-828,829-845,847-853 1oey d1oeym_ M:282-290,292-297,299-311,323-329 1oey d1oeyj_ J:282-290,292-297,299-310,323-329 1wmh d1wmha_ A:57-64,66-71,73-88,91-98 1q1o d1q1oa_ A:815-821,823-829,830-845,847-853 1wi0 d1wi0a_ A:59-65,67-73,74-96,101-107 2bkf d2bkfa1 A:43-51,53-58,60-75,76-85 1ip9 d1ip9a_ A:49-56,59-64,66-77,78-85 1oey d1oeyk_ K:282-290,292-297,299-313,323-329 1wj6 d1wj6a_ A:52-61,63-68,70-85,86-97 1f2r d1f2ri_ I:59-65,66-70,72-80,81-89 1f2r d1f2rc_ C:46-53,54-59,59-67,68-77 2npt d2nptb1 B:79-87,88-93,95-109,114-122 2npt d2nptc1 C:58-65,67-73,74-96,101-108 2npt d2npta1 A:58-65,67-73,74-96,101-108 2npt d2nptd1 D:79-87,88-93,95-110,114-122 2cu1 d2cu1a1 A:44-52,53-58,60-75,79-87 1ibx d1ibxb_ B:59-65,66-70,72-80,81-89 1vd2 d1vd2a_ A:56-64,66-71,73-88,91-99 65. d.58.24 CheY-binding domain of CheA Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1fwp d1fwpa_ A:1-8,35-42,46-59,62-66 1a0o d1a0ob_ B:159-166,193-200,204-216,220-226 1u0s d1u0sa_ A:176-185,227-236,238-250,252-260 1ffw d1ffwb_ B:159-166,193-200,204-216,220-226 1ffg d1ffgd_ D:159-166,193-200,204-216,220-226 1ffw d1ffwd_ D:159-166,193-200,204-216,220-226 1ffs d1ffsd_ D:159-166,193-200,204-216,220-226 1ffs d1ffsb_ B:159-166,193-200,204-216,220-226 1ffg d1ffgb_ B:159-166,193-200,204-216,220-226 1a0o d1a0of_ F:159-166,193-200,204-216,220-225 1a0o d1a0od_ D:160-166,193-199,204-216,220-225 1a0o d1a0oh_ H:160-166,193-199,204-216,220-225 1eay d1eayd_ D:159-167,193-199,204-216,221-226 1eay d1eayc_ C:160-167,193-199,204-217,221-225 66. d.58.6 Nucleoside diphosphate kinase, NDK Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 3bbf d3bbfd1 D:5-12,72-80,82-92,116-120 3bbb d3bbbc1 C:5-12,72-80,82-92,116-120 3bbb d3bbbe1 E:5-12,72-80,82-92,116-120 2az3 d2az3e1 E:6-13,73-81,83-93,117-121 3bbb d3bbbb1 B:5-12,72-80,82-92,116-120 3bbb d3bbbf1 F:5-12,72-80,82-92,116-120 1u8w d1u8wb_ B:2-9,69-77,79-89,113-117 2az3 d2az3i1 I:6-13,73-81,83-93,117-121 1u8w d1u8we_ E:2-9,69-77,79-89,113-117 1nue d1nueb_ B:5-12,72-80,82-92,116-120 1nue d1nued_ D:5-12,72-80,82-92,116-120 2az3 d2az3d1 D:6-13,73-81,83-93,117-121 3bbf d3bbfc1 C:5-12,72-80,82-92,116-120 2az3 d2az3a1 A:6-13,73-81,83-93,117-121 1pku d1pkuc1 C:5-12,72-80,82-92,116-120 1jxv d1jxvb_ B:4-12,72-81,82-92,116-120 1nue d1nuef_ F:5-12,72-80,82-92,116-120 1hiy d1hiyb_ B:209-216,276-285,286-296,320-324 1jxv d1jxve_ E:4-12,72-81,82-92,116-120 1xiq d1xiqc_ C:2-9,69-77,79-89,113-117 1pku d1pkue1 E:5-12,72-80,82-92,116-120 1jxv d1jxva_ A:4-12,72-81,82-92,116-120 2az1 d2az1a1 A:6-13,73-81,83-93,117-121 1nue d1nuee_ E:4-12,72-81,82-92,116-120 1xiq d1xiqd_ D:2-9,69-77,79-89,113-117 1xiq d1xiqe_ E:2-9,69-77,79-89,113-117 1bhn d1bhnf_ F:5-12,72-80,82-92,116-120 1nue d1nuea_ A:4-12,72-81,82-92,116-120 1jxv d1jxvf_ F:4-12,72-81,82-92,116-120 1jxv d1jxvc_ C:4-12,72-81,82-92,116-120 1s59 d1s59b_ B:84-91,151-159,161-171,195-199 1nue d1nuec_ C:4-12,72-81,82-92,116-120 1xiq d1xiqa_ A:2-9,69-77,79-89,113-117 1s59 d1s59e_ E:84-91,151-159,161-171,195-199 1xiq d1xiqb_ B:2-9,69-77,79-89,113-117 2az1 d2az1d1 D:6-13,73-81,83-93,117-121 1jxv d1jxvd_ D:4-12,72-81,82-92,116-120 1pku d1pkua1 A:5-12,72-80,82-92,116-120 1pku d1pkub1 B:4-12,72-81,82-92,116-120 2az1 d2az1e1 E:6-13,73-81,83-93,117-121 2az3 d2az3f1 F:6-13,73-81,83-93,117-121 1xqi d1xqib1 B:16-23,116-124,126-136,170-174 1pku d1pkud1 D:4-12,72-81,82-92,116-120 1u8w d1u8wc_ C:2-9,69-77,79-89,113-117 1wkl d1wkla1 A:2-9,69-77,79-89,113-117 1u8w d1u8wa_ A:1-9,69-78,79-89,113-117 1u8w d1u8wd_ D:1-9,69-78,79-89,113-117 1s59 d1s59c_ C:83-91,151-160,161-171,195-199 1wkk d1wkka1 A:2-9,69-77,79-89,113-117 1wkk d1wkkb1 B:2-9,69-77,79-89,113-117 1u8w d1u8wf_ F:1-9,69-78,79-89,113-117 1s57 d1s57e_ E:84-91,151-159,161-171,195-199 3bbf d3bbfb1 B:4-12,72-81,82-92,116-120 1s59 d1s59f_ F:83-91,151-160,161-171,195-199 1wkj d1wkja1 A:2-9,69-77,79-89,113-117 1nhk d1nhkr_ R:3-11,71-80,81-91,115-119 1s59 d1s59a_ A:83-91,151-160,161-171,195-199 1s57 d1s57b_ B:84-91,151-159,161-171,195-199 1wkj d1wkjb1 B:2-9,69-77,79-89,113-117 1nlk d1nlkr_ R:3-11,71-80,81-91,115-119 1xqi d1xqic1 C:16-23,116-124,126-136,170-174 1nsq d1nsqa_ A:4-13,73-82,83-93,117-121 1xqi d1xqia1 A:16-23,116-124,126-136,170-174 2az3 d2az3h1 H:5-13,73-82,83-93,117-121 1pku d1pkuk1 K:4-12,72-81,82-92,116-120 1wkl d1wklb1 B:2-9,69-77,79-89,113-117 1pku d1pkui1 I:5-12,72-80,82-92,116-120 1ndk d1ndka_ A:8-16,76-85,86-96,120-124 2az3 d2az3b1 B:6-13,73-81,83-93,117-121 2nck d2nckr_ R:3-11,71-80,81-91,115-119 1s59 d1s59d_ D:83-91,151-160,161-171,195-199 1pku d1pkuj1 J:4-12,72-81,82-92,116-120 2az1 d2az1c1 C:6-13,73-81,83-93,117-121 1pku d1pkuh1 H:4-12,72-81,82-92,116-120 1s57 d1s57c_ C:84-91,151-159,161-171,195-199 2az3 d2az3g1 G:6-13,73-81,83-93,117-121 2az3 d2az3c1 C:6-13,73-81,83-93,117-121 1s57 d1s57a_ A:83-91,151-160,161-171,195-199 1b4s d1b4sa_ A:7-16,76-85,86-96,120-124 1bhn d1bhnb_ B:4-12,72-81,82-92,116-120 2cwk d2cwkb1 B:7-15,75-84,85-95,122-126 1pku d1pkul1 L:4-12,72-81,82-92,116-120 2dxf d2dxfa1 A:7-15,75-84,85-95,122-126 1pku d1pkuf1 F:4-12,72-81,82-92,116-120 1s57 d1s57f_ F:83-91,151-160,161-171,195-199 1xiq d1xiqf_ F:1-9,69-78,79-89,113-117 1f3f d1f3fa_ A:7-16,76-85,86-96,120-124 1k44 d1k44d_ D:2-10,70-79,80-90,115-119 1s57 d1s57d_ D:83-91,151-160,161-171,195-199 1b99 d1b99f_ F:7-16,76-85,86-96,120-124 2dxe d2dxea1 A:7-15,75-84,85-95,122-126 1w7w d1w7we_ E:2-11,71-80,81-91,115-119 1w7w d1w7wc_ C:2-11,71-80,81-91,115-119 1w7w d1w7wa_ A:2-11,71-80,81-91,115-119 1be4 d1be4a_ A:3-12,72-81,82-92,116-120 1leo d1leoa_ A:7-16,76-85,86-96,120-124 1k44 d1k44a_ A:2-10,70-79,80-90,115-119 1ndl d1ndlc_ C:4-13,73-82,83-93,117-121 1k44 d1k44e_ E:2-10,70-79,80-90,115-119 1nsk d1nskt_ T:4-12,72-81,82-92,116-120 1k44 d1k44b_ B:2-10,70-79,80-90,115-119 1nsk d1nsko_ O:4-12,72-81,82-92,116-120 1ndl d1ndla_ A:4-13,73-82,83-93,117-121 1ndp d1ndpa_ A:7-16,76-85,86-96,120-124 1b99 d1b99d_ D:7-16,76-85,86-96,120-124 1ndl d1ndlb_ B:4-13,73-82,83-93,117-121 1k44 d1k44c_ C:2-10,70-79,80-90,115-119 1w7w d1w7wd_ D:2-11,71-80,81-91,115-119 1w7w d1w7wb_ B:2-11,71-80,81-91,115-119 1w7w d1w7wf_ F:2-11,71-80,81-91,115-119 3bbb d3bbba1 A:3-12,72-81,82-92,116-120 1b99 d1b99c_ C:7-16,76-85,86-96,120-124 1pku d1pkug1 G:4-12,72-81,82-92,116-120 1nsk d1nskn_ N:4-12,72-81,82-92,116-120 1k44 d1k44f_ F:2-10,70-79,80-90,115-119 3bbb d3bbbd1 D:3-12,72-81,82-92,116-120 1nsk d1nsku_ U:4-12,72-81,82-92,116-120 1b99 d1b99b_ B:7-16,76-85,86-96,120-124 1be4 d1be4c_ C:3-12,72-81,82-92,116-120 1nsk d1nskl_ L:4-12,72-81,82-92,116-120 1nsq d1nsqc_ C:4-13,73-82,83-93,117-121 1nsk d1nskr_ R:4-12,72-81,82-92,116-120 1bhn d1bhne_ E:3-12,72-81,82-92,116-120 1bux d1buxb_ B:7-16,76-85,86-96,120-124 1bhn d1bhnd_ D:5-12,72-80,82-92,116-120 1b99 d1b99a_ A:7-16,76-85,86-96,120-124 1b99 d1b99e_ E:7-16,76-85,86-96,120-124 1ndc d1ndca_ A:7-16,76-85,86-96,120-124 2hvd d2hvdb1 B:3-12,72-81,82-92,116-120 1s5z d1s5ze1 E:7-16,76-85,86-96,120-124 1f3f d1f3fb_ B:7-16,76-85,86-96,120-124 1kdn d1kdna_ A:7-16,76-85,86-96,120-124 2bef d2befa_ A:7-16,76-85,86-96,120-124 3bbf d3bbfe1 E:3-12,72-81,82-92,116-120 1nsq d1nsqb_ B:4-13,73-82,83-93,117-121 1npk d1npka_ A:7-16,76-85,86-96,120-124 1lwx d1lwxb_ B:7-16,76-85,86-96,120-124 1s5z d1s5za1 A:7-16,76-85,86-96,120-124 1mn7 d1mn7b_ B:7-16,76-85,86-96,120-124 3bbf d3bbfa1 A:3-12,72-81,82-92,116-120 1be4 d1be4b_ B:3-12,72-81,82-92,116-120 1mn9 d1mn9a_ A:7-16,76-85,86-96,120-124 1ncl d1ncla_ A:7-16,76-85,86-96,120-124 1ndp d1ndpb_ B:7-16,76-85,86-96,120-124 1f3f d1f3fc_ C:7-16,76-85,86-96,120-124 1f6t d1f6ta_ A:7-16,76-85,86-96,120-124 1b4s d1b4sb_ B:7-16,76-85,86-96,120-124 1mn9 d1mn9b_ B:7-16,76-85,86-96,120-124 3bbf d3bbff1 F:3-12,72-81,82-92,116-120 1mn7 d1mn7a_ A:7-16,76-85,86-96,120-124 1bux d1buxa_ A:7-16,76-85,86-96,120-124 2az1 d2az1f1 F:4-13,73-82,83-93,117-121 1s5z d1s5zc1 C:7-16,76-85,86-96,120-124 1kdn d1kdnb_ B:7-16,76-85,86-96,120-124 1nsp d1nspa_ A:7-16,76-85,86-96,120-124 1bhn d1bhnc_ C:3-12,72-81,82-92,116-120 1bux d1buxc_ C:7-16,76-85,86-96,120-124 1hiy d1hiya_ A:7-16,76-85,86-96,120-124 1hhq d1hhqa_ A:7-16,76-85,86-96,120-124 1s5z d1s5zb1 B:7-16,76-85,86-96,120-124 2b8q d2b8qe1 E:1-9,69-79,80-90,110-114 1ucn d1ucnc_ C:3-12,72-81,82-92,116-120 2b8q d2b8qc1 C:1-9,69-79,80-90,110-114 1zs6 d1zs6b1 B:20-29,89-98,99-109,133-137 1ehw d1ehwb_ B:3-12,72-81,82-92,116-120 2b8p d2b8pb1 B:1-9,69-79,80-90,110-114 1zs6 d1zs6a1 A:20-29,89-98,99-109,133-137 2bef d2befb_ B:7-16,76-85,86-96,120-124 1zs6 d1zs6d1 D:20-29,89-98,99-109,133-137 2b8q d2b8qd1 D:1-9,69-79,80-90,110-114 1s5z d1s5zf1 F:7-16,76-85,86-96,120-124 1s5z d1s5zd1 D:7-16,76-85,86-96,120-124 1hlw d1hlwa_ A:7-16,76-85,86-96,120-124 2hvd d2hvdc1 C:3-12,72-81,82-92,116-120 2az1 d2az1b1 B:4-13,73-82,83-93,117-121 1f6t d1f6tb_ B:7-16,76-85,86-96,120-124 1nb2 d1nb2a_ A:2-10,70-79,80-90,114-118 1b4s d1b4sc_ C:7-16,76-85,86-96,120-124 1ucn d1ucnb_ B:3-12,72-81,82-92,116-120 1lwx d1lwxc_ C:7-16,76-85,86-96,120-124 2b8q d2b8qf1 F:1-9,69-79,80-90,110-114 2bef d2befc_ C:7-16,76-85,86-96,120-124 1f6t d1f6tc_ C:7-16,76-85,86-96,120-124 1kdn d1kdnc_ C:7-16,76-85,86-96,120-124 2b8q d2b8qb1 B:1-9,69-79,80-90,110-114 1hiy d1hiyc_ C:407-416,476-485,486-496,520-524 1ehw d1ehwa_ A:3-12,72-81,82-92,116-120 2b8p d2b8pa1 A:1-9,69-79,80-90,110-114 1mn9 d1mn9c_ C:7-16,76-85,86-96,120-124 1lwx d1lwxa_ A:7-16,76-85,86-96,120-124 1ucn d1ucna_ A:3-12,72-81,82-92,116-120 1bhn d1bhna_ A:3-12,72-81,82-92,116-120 2hvd d2hvda1 A:3-12,72-81,82-92,116-120 1nhk d1nhkl_ L:2-11,71-81,81-91,115-119 2nck d2nckl_ L:2-11,71-81,81-91,115-119 2dy9 d2dy9b1 B:6-15,75-85,85-95,122-126 2dy9 d2dy9a1 A:6-15,75-85,85-95,122-126 1nlk d1nlkl_ L:2-11,71-81,81-91,115-119 2dya d2dyab1 B:6-15,75-85,85-95,122-126 2dya d2dyaa1 A:6-15,75-85,85-95,122-126 2dxd d2dxda1 A:6-15,75-85,85-95,122-126 2dxf d2dxfb1 B:6-15,75-85,85-95,122-126 2dxd d2dxdb1 B:6-15,75-85,85-95,122-126 2dxe d2dxeb1 B:6-15,75-85,85-95,122-126 2cwk d2cwka1 A:6-15,75-85,85-95,122-126 2b8q d2b8qa1 A:0-9,69-80,80-90,110-114 67. d.58.58 TTP0101/SSO1404-like contains extra C-terminal beta-strand that integrates into the beta-sheet of the other subunit in the homodimer, a probable biological unit of this superfamily ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2i0x d2i0xa1 A:1-9,31-37,38-54,58-66 1zpw d1zpwx1 X:3-12,35-42,42-57,62-69 2ivy d2ivya1 A:3-12,35-41,42-58,67-75 2i8e d2i8ea1 A:3-12,35-41,42-59,67-75 68. d.58.28 Peptide methionine sulfoxide reductase common fold is elaborated with additional secondary structures ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1fva d1fvab_ B:63-71,111-122,127-140,156-161 1fvg d1fvga_ A:63-71,111-122,127-140,156-161 1nwa d1nwaa_ A:4-12,48-59,64-77,93-99 1ff3 d1ff3b_ B:42-50,90-101,106-119,135-141 1fva d1fvaa_ A:63-71,111-122,127-140,156-161 1ff3 d1ff3c_ C:42-50,90-101,106-119,135-141 1ff3 d1ff3a_ A:42-50,90-101,106-119,135-141 2gt3 d2gt3a1 A:42-50,90-101,106-119,135-140 69. d.58.29 Nucleotide cyclase common fold is elaborated with additional secondary structures ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2gvd d2gvda1 A:389-398,440-447,452-466,482-491 1fx4 d1fx4a_ A:887-896,937-944,945-963,1008-1017 1fx2 d1fx2a_ A:899-908,949-956,957-975,1020-1029 2gvz d2gvza1 A:388-398,440-447,454-471,482-491 1cju d1cjub_ B:883-892,942-949,966-991,996-1004 1w25 d1w25a3 A:320-329,370-378,380-399,412-420 2v0n d2v0nb3 B:320-329,370-378,380-399,412-420 2v0n d2v0na3 A:320-329,370-378,380-399,412-420 1cjk d1cjka_ A:389-398,440-447,452-478,482-491 1w25 d1w25b3 B:320-329,370-378,380-399,412-420 2gvd d2gvdb1 B:883-892,942-949,964-991,996-1003 1cs4 d1cs4a_ A:389-398,440-447,454-478,482-491 1cul d1cula_ A:389-398,440-447,452-478,482-491 2gvz d2gvzb1 B:884-892,942-949,964-991,996-1003 1u0h d1u0hb_ B:883-892,942-949,964-991,996-1003 1tl7 d1tl7a_ A:389-398,440-447,454-478,482-491 1u0h d1u0ha_ A:389-398,440-447,454-478,482-491 1azs d1azsb_ B:883-892,942-949,964-991,996-1004 1tl7 d1tl7b_ B:883-892,942-949,966-991,996-1003 1cs4 d1cs4b_ B:883-892,942-949,964-991,996-1004 1cjv d1cjva_ A:389-398,440-447,454-478,482-491 1cjt d1cjtb_ B:883-892,942-949,964-991,996-1004 1ab8 d1ab8b_ B:883-892,942-949,965-991,996-1004 1cjv d1cjvb_ B:883-892,942-949,964-991,996-1004 1cul d1culb_ B:883-892,942-949,963-991,996-1004 1cjt d1cjta_ A:389-398,440-447,454-478,482-491 1cju d1cjua_ A:389-398,440-447,454-478,482-491 1wc6 d1wc6c_ C:1010-1019,1061-1068,1074-1104,1115-1124 1wc6 d1wc6a_ A:1010-1019,1061-1068,1074-1104,1115-1124 1ab8 d1ab8a_ A:883-892,942-949,965-991,996-1003 1wc6 d1wc6b_ B:1010-1019,1061-1068,1074-1104,1115-1124 1wc1 d1wc1b_ B:1010-1019,1061-1068,1074-1104,1115-1124 1wc5 d1wc5a_ A:1010-1019,1061-1068,1074-1104,1115-1124 1wc5 d1wc5c_ C:1010-1019,1061-1068,1074-1104,1115-1124 1cjk d1cjkb_ B:883-892,942-949,964-991,996-1004 1wc1 d1wc1a_ A:1010-1019,1061-1068,1074-1104,1115-1124 1wc5 d1wc5b_ B:1010-1019,1061-1068,1074-1104,1115-1124 1wc5 d1wc5d_ D:1010-1019,1061-1068,1074-1104,1115-1123 1wc3 d1wc3a_ A:1010-1020,1061-1068,1074-1104,1114-1124 1wc0 d1wc0a_ A:1010-1020,1061-1068,1074-1104,1114-1124 1wc0 d1wc0b_ B:1010-1020,1061-1068,1074-1104,1114-1124 1wc3 d1wc3b_ B:1010-1020,1061-1068,1074-1104,1114-1124 1wc4 d1wc4a_ A:1009-1020,1061-1068,1074-1104,1114-1124 1azs d1azsa_ A:388-399,440-447,454-478,481-491 1wc4 d1wc4b_ B:1007-1020,1061-1068,1074-1104,1114-1124 2gvd d2gvda1 A:389-398,440-447,465-478,482-491 1wc1 d1wc1c_ C:1005-1019,1061-1068,1074-1104,1115-1124 71. c.94.1 Periplasmic binding protein-like II Similar in architecture to the superfamily I but partly differs in topology ! Periplasmic binding protein-like II consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication ! mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest 1ixc d1ixca2 A:164-171,238-244,243-250,253-260 1ixc d1ixcb2 B:164-171,238-244,243-250,253-260 1iz1 d1iz1a2 A:164-171,238-244,243-250,253-260 1jw1 d1jw1a1 A:73-85,253-259,263-279,304-310 1rkm d1rkma_ A:270-278,410-418,422-431,478-485 1z7m d1z7mh1 H:92-99,151-158,160-167,168-177 1z7n d1z7nf1 F:92-99,151-158,160-167,168-177 1z7n d1z7nh1 H:92-99,151-158,160-167,168-177 1iz1 d1iz1q2 Q:164-171,238-244,243-250,253-260 1z7n d1z7ng1 G:91-99,151-158,160-167,168-178 1ve4 d1ve4a1 A:93-101,149-156,158-165,166-176 1h43 d1h43a_ A:74-82,253-258,263-279,304-310 1b0l d1b0la1 A:74-82,253-258,263-279,304-310 1ryx d1ryxa1 A:74-82,250-255,259-275,304-310 1z7m d1z7me1 E:92-99,151-158,160-167,168-177 1z7m d1z7mg1 G:92-99,151-158,160-167,168-177 2a5s d2a5sa1 A:136-142,210-215,215-226,230-236 1n76 d1n76a1 A:74-82,253-258,263-279,304-310 1lfi d1lfia1 A:74-82,253-258,263-279,304-310 1z7m d1z7mf1 F:92-99,151-158,160-167,168-177 1nft d1nfta_ A:74-82,250-255,257-275,304-310 1wod d1woda_ A:85-91,166-170,170-178,179-186 1b7z d1b7za2 A:407-416,595-600,603-619,644-650 1amf d1amfa_ A:85-91,166-170,170-178,179-186 3e3k d3e3ka1 A:246-254,391-399,398-414,463-470 1dot d1dota1 A:74-82,250-255,259-275,304-310 1lcf d1lcfa1 A:73-82,253-259,263-279,304-310 1iq7 d1iq7a_ A:407-415,592-597,600-616,641-647 1h45 d1h45a_ A:73-82,253-259,263-279,304-310 1tfa d1tfaa_ A:74-82,250-255,257-275,304-310 1utb d1utba_ A:171-177,241-246,246-254,258-264 1sqy d1sqya1 A:74-82,253-258,263-279,304-310 1n84 d1n84a_ A:77-85,248-254,259-275,299-305 1qjm d1qjma1 A:73-82,253-259,263-279,304-310 1lct d1lcta_ A:73-82,253-259,263-279,304-310 1d4n d1d4na_ A:77-85,248-254,259-275,299-305 1bka d1bkaa1 A:74-82,253-258,263-279,304-310 2d3i d2d3ia1 A:74-82,250-255,257-275,304-310 1b7z d1b7za1 A:73-82,253-259,263-279,304-310 1uth d1utha_ A:171-177,241-246,246-254,258-264 1uth d1uthb_ B:171-177,241-246,246-254,258-264 1iej d1ieja_ A:74-82,250-255,257-275,304-310 1f9b d1f9ba1 A:73-82,253-259,263-279,304-310 1fck d1fcka1 A:73-82,253-259,263-279,304-310 1nnt d1nnta_ A:74-82,250-255,257-275,304-310 1n7w d1n7wa_ A:77-85,249-254,259-275,299-305 1blf d1blfa1 A:73-82,253-259,263-279,304-310 1utb d1utbb_ B:171-177,241-246,246-254,258-264 1b1x d1b1xa1 A:73-82,253-259,263-279,304-310 1hse d1hsea_ A:73-82,253-259,263-279,304-310 1n04 d1n04a1 A:74-82,250-255,257-275,304-310 1i6q d1i6qa1 A:73-82,253-259,263-279,304-310 1h44 d1h44a_ A:73-82,253-259,263-279,304-310 1oqg d1oqga_ A:77-85,248-254,259-275,299-305 1n7x d1n7xa_ A:76-85,248-255,259-275,299-305 1qjm d1qjma2 A:407-415,595-600,603-619,645-650 2esn d2esnd2 D:176-182,246-251,251-259,263-268 1b3e d1b3ea_ A:76-85,248-255,259-275,299-305 1lfg d1lfga1 A:73-82,253-259,263-279,304-310 1dtz d1dtza1 A:73-82,253-259,263-279,304-310 1i6b d1i6ba1 A:73-82,253-259,263-279,304-310 1bp5 d1bp5b_ B:76-85,249-255,259-275,299-305 1lfg d1lfga2 A:407-415,597-602,605-621,647-652 1aiv d1aiva2 A:407-415,592-597,600-616,641-647 2bjj d2bjjx1 X:74-83,254-260,264-280,305-311 1fqe d1fqea_ A:77-85,249-254,259-275,299-305 1jqf d1jqfa_ A:77-85,249-254,259-275,299-305 1ovt d1ovta1 A:74-82,250-255,257-275,304-310 1lfh d1lfha2 A:407-415,597-602,605-621,647-652 3cr9 d3cr9a1 A:73-82,253-259,263-279,304-310 1ryo d1ryoa_ A:77-85,249-254,259-275,299-305 1cb6 d1cb6a2 A:1407-1415,1597-1602,1605-1621,1647-1652 1dtz d1dtza2 A:407-416,595-600,603-619,644-650 1a8e d1a8ea_ A:76-85,248-255,259-275,299-305 2esn d2esnc2 C:176-182,246-251,251-259,263-268 1vfd d1vfda_ A:73-82,253-259,263-279,304-310 1eh3 d1eh3a_ A:73-82,253-259,263-279,304-310 1i6q d1i6qa2 A:407-416,595-600,603-619,644-650 1ce2 d1ce2a1 A:73-82,253-259,263-279,304-310 1n76 d1n76a2 A:407-415,596-602,605-621,647-652 2esn d2esna2 A:176-182,246-251,251-259,263-268 1oqh d1oqha_ A:77-85,249-254,259-275,299-305 1b0l d1b0la2 A:407-415,597-602,605-621,647-652 3e3k d3e3kc1 C:246-254,391-399,398-414,463-470 2hav d2hava1 A:404-412,585-590,590-609,635-641 1d3k d1d3ka_ A:76-85,248-255,259-275,299-305 1bka d1bkaa2 A:407-415,597-602,605-621,647-652 2bjj d2bjjx2 X:408-416,598-603,606-622,648-653 2esn d2esnb2 B:176-182,246-251,251-259,263-268 1lgb d1lgbc_ C:95-100,205-209,210-219,226-232 1dsn d1dsna_ A:73-82,253-259,263-279,304-310 1lcf d1lcfa2 A:407-415,597-602,605-621,647-652 1vfe d1vfea_ A:73-82,253-259,263-279,304-310 1sqy d1sqya2 A:407-415,597-602,605-621,647-652 1tfd d1tfda_ A:77-85,249-254,259-275,299-304 1lfi d1lfia2 A:407-415,597-602,605-621,647-652 2hav d2havb1 B:404-412,585-590,591-609,635-641 1aiv d1aiva1 A:74-82,250-255,257-275,305-310 1bp5 d1bp5a_ A:76-85,249-255,259-275,299-305 1fck d1fcka2 A:407-415,597-602,605-621,647-652 1a8f d1a8fa_ A:76-85,248-255,259-275,299-305 1ryx d1ryxa2 A:407-415,592-597,600-616,642-647 1bp5 d1bp5c_ C:76-85,249-255,259-275,299-305 1h76 d1h76a1 A:75-84,253-259,263-279,303-309 1n04 d1n04a2 A:407-415,591-597,597-616,641-647 1dot d1dota2 A:407-415,592-597,600-616,641-647 1dtg d1dtga_ A:76-85,248-255,259-275,299-305 1jw1 d1jw1a1 A:91-100,205-211,210-219,226-232 2hau d2haub1 B:425-434,529-535,534-542,578-583 1biy d1biya1 A:73-82,253-259,263-279,304-310 1bp5 d1bp5d_ D:76-85,249-255,259-275,299-305 1z7n d1z7ne1 E:92-99,151-158,160-167,168-172 1jnf d1jnfa1 A:76-85,249-255,259-275,299-305 1jw1 d1jw1a2 A:432-441,539-544,544-552,568-574 1fqf d1fqfa_ A:76-85,249-255,259-275,299-305 1elj d1elja_ A:117-124,223-228,228-239,241-246 1i6b d1i6ba2 A:407-415,595-600,600-619,646-650 1btj d1btjb_ B:76-85,248-255,259-275,299-305 2i6e d2i6eh1 H:92-98,149-155,154-167,184-189 1btj d1btja_ A:76-85,248-255,259-275,299-305 1aov d1aova2 A:407-415,592-597,600-616,642-647 1vr5 d1vr5b1 B:272-283,428-433,441-451,505-515 1xt8 d1xt8a1 A:111-117,172-177,177-189,190-195 1eu8 d1eu8a_ A:125-130,252-257,257-266,275-279 1vr5 d1vr5a1 A:272-283,428-433,441-451,505-515 2onr d2onra1 A:115-120,231-236,236-244,245-249 1jvy d1jvya_ A:105-112,257-268,286-298,300-304 2i6e d2i6eb1 B:92-98,149-155,154-167,184-189 2ons d2onsa1 A:115-120,231-236,236-244,245-249 2i6e d2i6ee1 E:92-98,149-155,154-167,184-189 1cb6 d1cb6a1 A:1090-1100,1205-1211,1210-1219,1246-1252 2onk d2onkj1 J:115-120,231-236,236-244,245-249 2i6e d2i6ef1 F:92-98,149-155,154-167,184-189 2i6e d2i6ed1 D:92-98,149-155,154-167,184-189 2i6e d2i6ea1 A:92-98,149-155,154-167,184-189 2i6e d2i6eg1 G:92-98,149-155,154-167,184-189 1aov d1aova1 A:74-85,250-255,259-275,305-310 1r1n d1r1ng_ G:103-109,188-193,193-205,210-215 1gvc d1gvca_ A:95-103,207-213,212-221,226-232 2i6e d2i6ec1 C:92-98,149-155,154-167,184-189 2d3i d2d3ia2 A:407-415,592-597,597-616,641-647 1lfh d1lfha1 A:90-100,205-210,210-219,246-252 2hau d2haua1 A:404-412,585-590,590-609,636-641 1xc1 d1xc1f_ F:103-109,188-193,193-205,210-215 1o7t d1o7tg_ G:103-109,188-193,193-205,210-215 2hau d2haub1 B:425-434,529-535,534-542,558-564 1sbp d1sbpa_ A:97-103,187-192,192-205,207-212 2onk d2onke1 E:115-120,231-236,236-244,245-249 1n04 d1n04a1 A:90-100,204-210,209-218,243-249 1z7n d1z7ne1 E:92-99,151-158,160-167,172-177 1xc1 d1xc1g_ G:103-109,188-193,193-205,210-215 1biy d1biya1 A:90-100,205-211,210-219,246-252 1biy d1biya2 A:407-415,595-600,601-619,645-650 1ovt d1ovta2 A:407-415,592-597,597-616,641-647 2ozz d2ozza1 A:96-103,154-160,162-170,170-175 1xt8 d1xt8b1 B:111-117,172-177,177-189,190-195 1b7z d1b7za1 A:90-100,205-211,210-219,246-252 2alu d2alua1 A:407-415,595-600,600-619,646-650 2dp8 d2dp8a1 A:407-415,595-600,600-619,646-650 1h76 d1h76a2 A:408-416,594-599,599-618,644-650 1bp5 d1bp5a_ A:93-103,201-207,206-215,242-248 2dqv d2dqva1 A:407-415,595-600,600-619,646-650 1nnt d1nnta_ A:90-100,204-210,209-218,243-249 2dsf d2dsfa1 A:407-415,595-600,600-619,646-650 1qjm d1qjma1 A:90-100,205-211,210-219,246-252 2dxy d2dxya1 A:407-415,595-600,600-619,646-650 1iej d1ieja_ A:90-100,204-210,209-218,243-249 1sdx d1sdx.1 A:407-415,595-600,600-619,645-650 2r71 d2r71a1 A:407-415,595-600,600-619,645-650 1b1x d1b1xa2 A:407-416,594-600,600-619,644-650 2fa7 d2fa7a1 A:407-415,595-600,600-619,645-650 2dwi d2dwia1 A:407-415,595-600,600-619,646-650 2r9j d2r9ja1 A:407-415,595-600,600-619,646-650 1xc1 d1xc1d_ D:103-109,188-193,193-205,210-215 1h76 d1h76a1 A:92-102,205-211,210-218,246-252 1ce2 d1ce2a2 A:407-415,595-600,600-619,645-650 2e0s d2e0sa1 A:407-415,595-600,600-619,646-650 3cr9 d3cr9a1 A:90-100,205-211,210-219,246-252 3ci8 d3ci8a1 A:407-415,595-600,600-619,646-650 3e9x d3e9xa1 A:407-415,595-600,600-619,646-650 2e1s d2e1sa1 A:407-415,595-600,600-619,646-650 1bp5 d1bp5c_ C:93-103,201-207,206-215,242-248 1bp5 d1bp5d_ D:93-103,201-207,206-215,242-248 2g93 d2g93a1 A:407-415,595-600,600-619,646-650 2qje d2qjea1 A:407-415,595-600,600-619,646-650 1n04 d1n04a2 A:429-439,536-542,541-551,585-591 2h4i d2h4ia1 A:407-415,595-600,600-619,646-650 1nkx d1nkxa_ A:407-415,595-600,600-619,645-650 1fqf d1fqfa_ A:93-103,201-207,206-215,242-248 3crb d3crba1 A:407-415,595-600,600-619,646-650 1hsl d1hslb_ B:92-98,156-161,161-173,177-181 1uiv d1uivb_ B:1246-1254,1391-1399,1402-1414,1463-1471 2o1l d2o1la1 A:407-415,595-600,600-619,645-650 2e1s d2e1sa1 A:432-441,539-545,544-552,568-574 2dwj d2dwja1 A:407-415,595-600,600-619,646-650 2doj d2doja1 A:407-415,595-600,600-619,645-650 2qmw d2qmwa1 A:84-89,138-145,144-152,154-161 2p1s d2p1sa1 A:407-415,595-600,600-619,646-650 1iud d1iuda_ A:113-119,223-228,228-239,241-246 1xc1 d1xc1a_ A:103-109,188-193,193-205,210-215 1aov d1aova2 A:430-439,536-542,541-551,565-571 2czl d2czla1 A:83-88,139-144,144-151,156-161 1jnf d1jnfa2 A:404-412,582-587,587-606,633-637 1hpb d1hpbp_ P:91-98,156-161,161-173,177-181 2dwa d2dwaa1 A:407-415,595-600,600-619,646-650 2dyx d2dyxa1 A:407-415,595-600,600-619,646-650 1r1n d1r1nh_ H:103-109,188-193,193-205,210-215 1l5t d1l5ta_ A:90-100,205-211,210-219,246-252 1b7u d1b7ua2 A:432-441,539-544,544-552,588-593 2zmb d2zmba1 A:407-415,595-600,600-619,646-650 1r1n d1r1nd_ D:103-109,188-193,193-205,210-215 1qvs d1qvsa_ A:103-109,188-193,193-205,210-215 1qw0 d1qw0a_ A:103-109,188-193,193-205,210-215 1a8f d1a8fa_ A:93-103,201-207,206-215,242-248 2nxo d2nxob1 B:85-91,144-150,149-160,166-170 1iiw d1iiwa_ A:92-102,157-162,162-174,177-181 2ays d2aysa1 A:407-415,595-600,600-619,645-650 1o7t d1o7te_ E:103-109,188-193,193-205,210-215 2ocu d2ocua1 A:407-415,595-600,600-619,645-650 1nh8 d1nh8a1 A:89-98,150-157,159-166,166-170 3cfl d3cfla1 A:407-415,595-600,600-619,646-650 1dtg d1dtga_ A:93-103,201-207,206-215,242-248 1aov d1aova2 A:430-439,536-542,541-551,585-590 1b1x d1b1xa1 A:90-100,205-211,210-219,246-252 3e3k d3e3ka1 A:246-254,391-399,416-425,463-470 1dot d1dota1 A:90-100,204-210,209-218,243-249 2ds9 d2ds9a1 A:407-415,595-600,600-619,646-650 1vfd d1vfda_ A:90-100,205-211,210-219,246-252 1jnf d1jnfa2 A:424-433,526-532,531-539,555-561 1oqg d1oqga_ A:93-103,201-207,206-215,242-248 1f9b d1f9ba1 A:90-100,205-211,210-219,246-252 3cr9 d3cr9a2 A:407-416,595-600,600-619,644-650 1uiv d1uiva_ A:246-254,391-399,416-425,463-471 1fqe d1fqea_ A:93-103,201-207,206-215,242-248 1r1n d1r1na_ A:103-109,188-193,193-205,210-215 1blf d1blfa1 A:90-100,205-211,210-219,246-252 2dwh d2dwha1 A:407-415,595-600,600-619,646-650 1ryo d1ryoa_ A:93-103,201-207,206-215,242-248 2dxr d2dxra1 A:407-415,595-600,600-619,645-650 1f9b d1f9ba2 A:407-416,594-600,600-619,644-650 2thi d2thia_ A:115-121,234-239,239-247,252-257 2dvc d2dvca1 A:407-415,595-600,600-619,645-650 1oqh d1oqha_ A:93-103,201-207,206-215,242-248 2dqv d2dqva1 A:432-441,539-544,544-552,568-574 1aov d1aova1 A:93-100,204-210,209-218,223-229 1jqf d1jqfa_ A:93-103,201-207,206-215,242-248 1bp5 d1bp5b_ B:93-102,201-207,206-215,242-248 2d3i d2d3ia1 A:90-100,204-210,209-218,243-249 1ovt d1ovta1 A:90-100,204-210,209-218,243-249 1usy d1usyg_ G:86-94,143-150,152-159,159-164 2nuv d2nuva1 A:407-415,595-600,600-619,645-650 2hav d2havb1 B:425-434,529-535,534-544,558-564 1ce2 d1ce2a1 A:90-100,205-211,210-219,246-252 2e1s d2e1sa1 A:432-441,539-545,544-552,588-593 2thi d2thib_ B:115-121,234-239,239-247,252-257 1nnf d1nnfa_ A:103-109,188-193,193-205,210-215 1btj d1btjb_ B:93-103,201-207,206-215,242-248 2dp8 d2dp8a1 A:432-441,539-544,544-552,568-574 3dp8 d3dp8a1 A:246-254,391-399,416-425,463-470 2dvc d2dvca1 A:432-441,539-545,544-552,568-574 2hca d2hcaa1 A:407-415,595-600,600-619,645-650 1l5t d1l5tb_ B:90-100,205-211,210-219,246-252 2nwj d2nwja1 A:407-415,595-600,600-619,645-650 1b3e d1b3ea_ A:93-103,201-207,206-215,242-248 3crb d3crba1 A:432-441,539-544,544-552,568-574 2hau d2haub1 B:404-412,585-590,590-609,635-640 2ds9 d2ds9a1 A:432-441,539-544,544-552,568-574 1uiv d1uiva_ A:246-254,391-399,402-414,463-471 1r1n d1r1ne_ E:103-109,188-193,193-205,210-215 1uiv d1uivb_ B:1246-1254,1391-1399,1416-1425,1463-1471 1yae d1yaec1 C:534-544,732-738,738-750,751-755 1blf d1blfa2 A:407-415,595-600,600-619,645-650 1d4n d1d4na_ A:93-103,201-207,206-215,242-248 2o51 d2o51a1 A:407-415,595-600,600-619,645-650 1a7l d1a7lc_ C:113-119,223-228,228-239,241-246 1d3k d1d3ka_ A:93-103,201-207,206-215,242-248 3dp8 d3dp8a1 A:246-254,391-399,402-414,463-470 1h44 d1h44a_ A:90-100,205-211,210-219,246-252 1a8e d1a8ea_ A:93-103,201-207,206-215,242-248 1a7l d1a7la_ A:113-119,223-228,228-239,241-246 3dp8 d3dp8b1 B:246-254,391-398,416-425,463-471 1n7w d1n7wa_ A:93-103,201-207,206-215,242-248 2b65 d2b65a1 A:407-415,595-600,600-619,646-650 1n7x d1n7xa_ A:93-103,201-207,206-215,242-248 2dvc d2dvca1 A:432-441,539-545,544-552,588-593 1dot d1dota2 A:430-439,536-542,541-549,565-571 1dtz d1dtza1 A:90-100,205-211,210-219,246-252 1r1n d1r1ni_ I:103-109,188-193,193-205,210-215 2px1 d2px1a1 A:407-415,595-600,600-619,645-650 3e9x d3e9xa1 A:432-441,539-544,544-552,568-574 2nxo d2nxoc1 C:74-80,182-191,198-220,245-249 1hsl d1hsla_ A:93-98,156-160,161-173,177-181 2q8j d2q8ja1 A:407-415,595-600,600-619,645-650 1lst d1lsta_ A:91-98,156-161,161-173,177-181 1yae d1yaee1 E:535-544,732-738,738-750,751-755 1biy d1biya2 A:432-441,539-545,544-552,568-574 1a7l d1a7lb_ B:113-119,223-228,228-239,241-246 2px1 d2px1a1 A:432-441,539-544,544-552,568-574 3ci8 d3ci8a1 A:432-441,539-544,544-552,568-574 2ocu d2ocua1 A:432-441,539-544,544-552,568-574 1mh4 d1mh4a2 A:113-119,223-228,228-239,241-246 2doj d2doja1 A:432-441,539-544,544-552,568-574 1dtz d1dtza2 A:432-440,539-545,544-552,588-593 1mg1 d1mg1a1 A:114-120,224-229,229-240,242-247 1jnf d1jnfa2 A:424-433,526-532,531-539,575-580 2fa7 d2fa7a1 A:432-441,539-544,544-552,568-574 2qmw d2qmwb1 B:84-89,138-145,144-152,154-159 1n84 d1n84a_ A:93-103,201-207,206-215,242-248 2nuv d2nuva1 A:432-441,539-544,544-552,568-574 1eh3 d1eh3a_ A:90-100,205-211,210-219,246-252 1lfh d1lfha2 A:434-443,541-547,546-554,590-595 1nft d1nfta_ A:89-100,204-210,209-218,243-249 1lfh d1lfha2 A:434-443,541-547,546-554,570-576 1laf d1lafe_ E:91-98,156-161,161-173,177-181 1zbm d1zbma1 A:82-87,137-142,143-153,154-159 2dwi d2dwia1 A:432-441,539-544,544-552,568-574 1mdp d1mdp2_ 2:113-119,223-228,228-239,241-246 1nl5 d1nl5a_ A:113-119,223-228,228-239,241-246 1ytv d1ytvb1 B:127-133,237-242,242-253,255-260 2nxo d2nxod1 D:74-80,182-191,199-220,245-249 1sdx d1sdx.1 A:432-441,539-544,544-552,568-574 1r6z d1r6zz2 Z:112-118,222-227,227-238,240-245 1ce2 d1ce2a2 A:432-441,539-544,544-552,568-574 1i6b d1i6ba2 A:432-441,539-545,544-552,568-574 2dwj d2dwja1 A:432-441,539-544,544-552,568-574 1anf d1anfa_ A:113-119,223-228,228-239,241-246 1cb6 d1cb6a2 A:1434-1443,1541-1547,1546-1554,1570-1576 2e0s d2e0sa1 A:432-441,539-544,544-552,568-574 2dxr d2dxra1 A:432-441,539-544,544-552,568-574 1b7u d1b7ua2 A:407-416,595-600,600-619,644-650 2alu d2alua1 A:432-441,539-544,544-552,568-574 2nwj d2nwja1 A:432-441,539-544,544-552,568-574 1gv8 d1gv8a_ A:94-103,207-213,212-221,226-232 2hca d2hcaa1 A:432-441,539-544,544-552,568-574 2r9j d2r9ja1 A:432-441,539-544,544-552,568-574 3dp8 d3dp8c1 C:246-254,391-399,416-425,463-470 1ovb d1ovba_ A:94-103,201-207,206-215,222-228 2cmo d2cmob1 B:107-117,187-193,193-204,207-211 1r6z d1r6zp2 P:112-118,222-227,227-238,240-245 1r6z d1r6za2 A:112-118,222-227,227-238,240-245 1nmu d1nmua_ A:113-119,223-228,228-239,241-246 1usy d1usyf_ F:86-94,143-150,152-159,159-163 1usy d1usyf_ F:86-94,143-150,152-159,163-169 2ays d2aysa1 A:432-441,539-544,544-552,568-574 2dwa d2dwaa1 A:432-441,539-544,544-552,568-574 2g93 d2g93a1 A:432-441,539-544,544-552,568-574 1iq7 d1iq7a_ A:428-439,536-542,541-549,585-591 1fqc d1fqca_ A:113-119,223-228,228-239,241-246 1tfa d1tfaa_ A:89-100,204-210,209-218,243-249 2dxy d2dxya1 A:432-441,539-544,544-552,568-574 2q8j d2q8ja1 A:432-441,539-544,544-552,568-574 1hsj d1hsja2 A:113-119,223-228,228-239,241-246 1h45 d1h45a_ A:90-100,205-211,210-219,246-252 1hsj d1hsjb2 B:113-119,223-228,228-239,241-246 2r71 d2r71a1 A:432-441,539-544,544-552,568-574 2o1l d2o1la1 A:432-441,539-544,544-552,568-574 2b65 d2b65a1 A:432-441,539-544,544-552,568-574 2dsf d2dsfa1 A:432-441,539-544,544-552,588-593 1ryx d1ryxa2 A:431-439,536-542,541-551,565-571 1lct d1lcta_ A:90-100,205-211,210-219,246-252 1n3w d1n3wa_ A:113-119,223-228,228-239,241-246 2dyx d2dyxa1 A:432-441,539-544,544-552,568-574 2qje d2qjea1 A:432-441,539-544,544-552,568-574 2h4i d2h4ia1 A:432-441,539-544,544-552,568-574 1lag d1lage_ E:91-98,156-161,161-173,177-181 3mbp d3mbpa_ A:113-119,223-228,228-239,241-246 1mdp d1mdp1_ 1:113-119,223-228,228-239,241-246 1ytv d1ytva1 A:127-133,237-242,242-253,255-260 2p1s d2p1sa1 A:432-441,539-544,544-552,568-574 1mpb d1mpba_ A:113-119,223-228,228-239,241-246 1r1n d1r1nb_ B:103-109,188-193,193-205,210-215 1h43 d1h43a_ A:90-100,205-211,210-219,246-252 1i6q d1i6qa1 A:90-100,205-211,210-219,246-252 1nkx d1nkxa_ A:432-441,539-544,544-552,568-574 1lah d1lahe_ E:91-98,156-161,161-173,177-181 2dsf d2dsfa1 A:432-441,539-544,544-552,568-574 1fqd d1fqda_ A:113-119,223-228,228-239,241-246 2r6g d2r6ge1 E:113-119,223-228,228-239,241-246 1fck d1fcka2 A:434-443,541-547,546-554,570-576 2dwh d2dwha1 A:432-441,539-544,544-552,568-574 1lcf d1lcfa1 A:90-100,205-211,210-219,246-252 1jnf d1jnfa1 A:93-103,201-207,206-215,242-248 1mh3 d1mh3a2 A:113-119,223-228,228-239,241-246 1jvx d1jvxa_ A:113-119,223-228,228-239,241-246 2hav d2havb1 B:425-434,529-535,534-544,578-583 4mbp d4mbpa_ A:113-119,223-228,228-239,241-246 1hse d1hsea_ A:90-100,205-211,210-219,246-252 1lfi d1lfia1 A:90-100,205-211,210-219,246-252 2zmb d2zmba1 A:432-441,539-544,544-552,568-574 2nxo d2nxoa1 A:74-80,182-191,198-220,245-249 2o51 d2o51a1 A:432-441,539-544,544-552,568-574 1lax d1laxa_ A:113-119,223-228,228-239,241-246 1dsn d1dsna_ A:90-100,205-211,210-218,246-252 2bjj d2bjjx2 X:435-444,542-548,547-555,571-577 3cfl d3cfla1 A:432-441,539-544,544-552,568-574 1bka d1bkaa1 A:90-100,205-211,210-219,246-252 1mdq d1mdqa_ A:113-119,223-228,228-239,241-246 1blf d1blfa2 A:432-441,539-544,544-554,568-574 1h76 d1h76a2 A:430-439,538-544,543-551,567-573 1mqj d1mqja_ A:107-117,187-193,193-203,207-211 3csb d3csba2 A:113-119,223-228,228-239,241-246 1jvy d1jvya_ A:113-119,223-228,228-239,241-246 2nxo d2nxob1 B:74-80,182-191,198-220,245-249 1lax d1laxc_ C:113-119,223-228,228-239,241-246 1fck d1fcka1 A:90-100,205-211,210-219,246-252 2lao d2laoa_ A:91-98,156-161,161-173,177-181 1i6q d1i6qa2 A:432-441,539-545,544-554,568-574 1nmu d1nmuc_ C:113-119,223-228,228-239,241-246 1lfg d1lfga1 A:90-100,205-211,210-219,246-252 2al5 d2al5b1 B:107-117,187-193,193-203,207-211 1zlq d1zlqb1 B:247-254,391-398,416-425,463-470 1btj d1btja_ A:93-102,201-207,206-215,242-248 1mpd d1mpda_ A:113-119,223-228,228-239,241-246 1sqy d1sqya1 A:90-100,205-211,210-219,246-252 2al5 d2al5a1 A:107-117,187-193,193-203,207-211 1b0l d1b0la1 A:90-100,205-211,210-219,246-252 1n76 d1n76a2 A:434-443,541-547,546-554,570-576 1y1m d1y1mb1 B:142-152,219-224,224-236,237-241 1vfe d1vfea_ A:90-100,205-211,210-219,246-252 1lcf d1lcfa2 A:434-443,541-547,546-554,570-576 1dmb d1dmba_ A:113-119,223-228,228-239,241-246 2a5t d2a5ta1 A:139-152,219-224,224-236,244-251 1zlq d1zlqa1 A:247-254,391-398,416-425,463-470 1r1n d1r1nc_ C:103-109,188-193,193-205,210-215 1pb7 d1pb7a_ A:139-152,219-224,224-236,244-251 1dot d1dota2 A:430-439,536-542,541-549,585-590 1n76 d1n76a1 A:90-100,205-211,210-219,246-252 1yae d1yaeb1 B:534-544,732-738,738-750,751-755 1p1o d1p1oa_ A:107-117,187-193,193-203,207-211 2bjj d2bjjx1 X:91-101,206-212,211-220,247-253 1svx d1svxb_ B:113-119,223-228,228-239,241-246 1t0k d1t0ka_ A:113-119,223-228,228-239,241-246 1mxw d1mxwa_ A:107-117,187-193,193-203,207-211 1bka d1bkaa2 A:434-443,541-547,546-554,570-576 1zkb d1zkba1 A:113-119,223-228,228-239,241-246 1ez9 d1ez9a_ A:113-119,223-228,228-239,241-246 1lls d1llsa_ A:113-119,223-228,228-239,241-246 1pb8 d1pb8a_ A:139-152,219-224,224-236,244-251 1m5d d1m5da_ A:107-117,187-193,193-203,207-211 1p1n d1p1na_ A:107-117,187-193,193-203,207-211 1mm7 d1mm7b_ B:107-117,187-193,193-203,207-211 1m5c d1m5ca_ A:107-117,187-193,193-203,207-211 1omp d1ompa_ A:113-119,223-228,228-239,241-246 1biy d1biya1 A:90-100,205-211,210-219,226-232 1syh d1syha1 A:104-114,184-190,190-200,204-208 1bp5 d1bp5a_ A:93-103,201-207,206-215,222-228 1ftj d1ftjc_ C:107-117,187-193,193-203,207-211 1mm6 d1mm6a_ A:107-117,187-193,193-203,207-211 1zjl d1zjla1 A:113-119,223-228,228-239,241-246 2hau d2haua1 A:425-434,529-535,534-544,558-564 1ftl d1ftlb_ B:107-117,187-193,193-203,207-211 1jw5 d1jw5a_ A:113-119,223-228,228-239,241-246 1jw4 d1jw4a_ A:113-119,223-228,228-239,241-246 1ziu d1ziua1 A:113-119,223-228,228-239,241-246 1mxw d1mxwc_ C:107-117,187-193,193-204,207-211 3bbr d3bbrb1 B:107-117,187-193,193-203,207-211 1mqd d1mqda_ A:104-114,184-190,190-200,204-208 1fqb d1fqba_ A:113-119,223-228,228-239,241-246 1my3 d1my3a_ A:107-117,187-193,193-203,207-211 1mm7 d1mm7a_ A:107-117,187-193,193-203,207-211 1my4 d1my4a_ A:107-117,187-193,193-203,207-211 1f9b d1f9ba2 A:432-441,539-545,544-552,568-574 1my2 d1my2b_ B:107-117,187-193,193-203,207-211 1mxu d1mxua_ A:107-117,187-193,193-203,207-211 1tfd d1tfda_ A:93-103,201-207,206-215,242-248 3cr9 d3cr9a2 A:432-441,539-545,544-552,568-574 1b0l d1b0la2 A:434-443,541-547,546-554,570-576 1ez9 d1ez9b_ B:1113-1119,1223-1228,1228-1239,1241-1246 3bbr d3bbra1 A:107-117,187-193,193-204,207-211 1sqy d1sqya2 A:434-443,541-547,546-554,570-576 1peb d1peba_ A:113-119,223-228,228-239,241-246 1mpc d1mpca_ A:113-119,223-228,228-239,241-246 1lb8 d1lb8b_ B:107-117,187-193,193-203,207-211 1ms7 d1ms7a_ A:104-114,184-190,190-200,204-208 3b7d d3b7dd1 D:107-117,187-193,193-203,207-211 3b7d d3b7df1 F:107-117,187-193,193-203,207-211 1n0t d1n0td_ D:107-117,187-193,193-204,207-211 1lfg d1lfga2 A:434-443,541-547,546-554,570-576 3b7d d3b7db1 B:107-117,187-193,193-203,207-211 1lfi d1lfia2 A:434-443,541-547,546-554,570-576 2hau d2haua1 A:425-434,529-535,534-544,578-583 3b7d d3b7dh1 H:107-117,187-193,193-203,207-211 3dp8 d3dp8c1 C:246-254,391-399,402-411,463-470 1qjm d1qjma2 A:432-441,539-545,544-552,568-574 2d3i d2d3ia2 A:429-439,536-542,541-551,585-591 2hav d2hava1 A:425-434,529-535,534-544,558-564 1s50 d1s50a1 A:107-117,185-191,191-203,204-208 1dtz d1dtza2 A:432-440,539-545,544-552,569-574 3bfu d3bfub1 B:107-117,187-193,193-204,207-211 1mqd d1mqdc_ C:104-114,184-190,190-201,204-208 1mqd d1mqdd_ D:104-114,184-190,190-201,204-208 1fqf d1fqfa_ A:93-103,201-207,206-215,222-228 1xhy d1xhya1 A:104-114,184-190,190-201,204-208 1b7z d1b7za1 A:90-100,205-211,210-219,226-232 1usy d1usyg_ G:86-94,143-150,152-159,164-169 1n3x d1n3xa_ A:113-119,223-228,228-239,241-246 1n04 d1n04a2 A:429-439,536-542,541-551,565-570 3bki d3bkic1 C:107-117,187-193,193-203,207-211 3bki d3bkib1 B:107-117,187-193,193-204,207-211 1lb8 d1lb8a_ A:107-117,187-193,193-203,207-211 3cr9 d3cr9a1 A:90-100,205-211,210-219,226-232 1syi d1syib1 B:104-114,184-190,190-201,204-208 1btj d1btjb_ B:93-103,201-207,206-215,222-228 1wvj d1wvja1 A:107-117,187-193,193-203,207-211 1b7u d1b7ua2 A:432-441,539-544,544-552,568-574 2f36 d2f36b1 B:106-116,184-190,190-202,203-207 1syi d1syia1 A:104-114,184-190,190-201,204-208 1urg d1urga_ A:143-149,248-253,253-264,266-271 1tt1 d1tt1b1 B:107-117,185-191,191-203,204-208 1m5e d1m5eb_ B:107-117,187-193,193-203,207-211 1p1w d1p1wa_ A:107-117,187-193,193-204,207-211 2onr d2onra1 A:106-113,283-290,308-319,326-330 1m5e d1m5ea_ A:107-117,187-193,193-203,207-211 1zmg d1zmga1 A:113-119,223-228,228-239,241-246 1urs d1ursb_ B:143-149,248-253,253-264,266-271 1b1x d1b1xa2 A:432-441,539-545,544-554,568-574 1cb6 d1cb6a1 A:1090-1100,1205-1211,1210-1219,1226-1232 2ons d2onsa1 A:106-113,283-290,308-319,326-330 1lfh d1lfha1 A:90-100,205-210,210-219,226-232 1b1x d1b1xa1 A:90-100,205-211,210-219,226-232 1urd d1urdb_ B:143-149,248-253,253-264,266-271 1jqf d1jqfa_ A:93-103,201-207,206-215,222-228 1lbc d1lbca_ A:107-117,187-193,193-204,207-211 1oqg d1oqga_ A:93-103,201-207,206-215,222-228 1n0t d1n0tc_ C:107-117,187-193,193-204,207-211 1b7z d1b7za2 A:432-441,539-545,544-552,568-574 1f9b d1f9ba1 A:90-100,205-211,210-219,226-232 1urs d1ursa_ A:143-149,248-253,253-264,266-271 1oqh d1oqha_ A:93-103,201-207,206-215,222-228 1aiv d1aiva2 A:431-439,536-542,541-551,565-571 1vfd d1vfda_ A:90-100,205-211,210-219,226-232 1urd d1urda_ A:143-149,248-253,253-264,266-271 1m5f d1m5fb_ B:107-117,187-193,193-204,207-211 3b7d d3b7dg1 G:107-117,187-193,193-204,207-211 3b7d d3b7da1 A:107-117,187-193,193-204,207-211 1bp5 d1bp5d_ D:93-103,201-207,206-215,222-228 1ce2 d1ce2a1 A:90-100,205-211,210-219,226-232 1fqe d1fqea_ A:93-103,201-207,206-215,222-228 1p99 d1p99a_ A:121-125,202-207,207-215,222-226 1ryo d1ryoa_ A:93-103,201-207,206-215,222-228 1bp5 d1bp5c_ C:93-103,201-207,206-215,222-228 1a8f d1a8fa_ A:93-103,201-207,206-215,222-228 2hav d2hava1 A:425-434,529-535,534-544,578-583 1p99 d1p99a_ A:109-119,237-244,249-261,276-280 1dtg d1dtga_ A:93-103,201-207,206-215,222-228 1m5f d1m5fc_ C:107-117,187-193,193-204,207-211 1iiw d1iiwa_ A:92-102,157-162,162-174,184-191 1m5f d1m5fa_ A:107-117,187-193,193-204,207-211 1h76 d1h76a1 A:92-102,205-211,210-218,226-232 1m5e d1m5ec_ C:107-117,187-193,193-204,207-211 1ovt d1ovta2 A:430-439,536-542,541-551,565-570 1n7w d1n7wa_ A:93-103,201-207,206-215,222-228 1iej d1ieja_ A:90-100,204-210,209-218,223-229 1a8e d1a8ea_ A:93-103,201-207,206-215,222-228 1n7x d1n7xa_ A:93-103,201-207,206-215,222-228 1ovt d1ovta2 A:430-439,536-542,541-551,585-590 1d3k d1d3ka_ A:93-103,201-207,206-215,222-228 1lct d1lcta_ A:90-100,205-211,210-219,226-232 1xs5 d1xs5a_ A:89-94,170-175,175-183,190-194 1n84 d1n84a_ A:93-103,201-207,206-215,222-228 1n04 d1n04a1 A:90-100,204-210,209-218,223-229 1pda d1pdaa1 A:105-110,165-170,170-178,184-188 2nxo d2nxoa1 A:85-91,145-150,149-160,166-170 1tt1 d1tt1a1 A:104-117,185-191,191-203,211-218 1n76 d1n76a1 A:90-100,205-211,210-219,226-232 1s7y d1s7ya1 A:107-117,185-191,191-203,204-208 1qjm d1qjma1 A:90-100,205-211,210-219,226-232 1d4n d1d4na_ A:93-103,201-207,206-215,222-228 1blf d1blfa1 A:90-100,205-211,210-219,226-232 1fck d1fcka1 A:90-100,205-211,210-219,226-232 1a99 d1a99b_ B:138-143,239-244,244-259,264-268 1gtk d1gtka1 A:105-110,165-170,170-178,184-188 1a99 d1a99d_ D:138-143,239-244,244-259,264-268 1l5t d1l5tb_ B:90-100,205-211,210-219,226-232 1a99 d1a99c_ C:138-143,239-244,244-259,264-268 1sd3 d1sd3a1 A:104-117,185-191,191-203,211-218 1a99 d1a99a_ A:138-143,239-244,244-259,264-268 1s7y d1s7yb1 B:104-117,185-191,191-203,211-218 3dp8 d3dp8b1 B:246-254,391-398,402-411,463-471 1l5t d1l5ta_ A:90-100,205-211,210-219,226-232 2f36 d2f36c1 C:106-116,184-190,190-202,203-207 1b3e d1b3ea_ A:93-103,201-207,206-215,222-228 1bka d1bkaa1 A:90-100,205-211,210-219,226-232 1sqy d1sqya1 A:90-100,205-211,210-219,226-232 1dtz d1dtza1 A:90-100,205-211,210-219,226-232 1h44 d1h44a_ A:90-100,205-211,210-219,226-232 1lfi d1lfia1 A:90-100,205-211,210-219,226-232 1h43 d1h43a_ A:90-100,205-211,210-219,226-232 1h45 d1h45a_ A:90-100,205-211,210-219,226-232 1bp5 d1bp5b_ B:93-102,201-207,206-215,223-228 1lcf d1lcfa1 A:90-100,205-211,210-219,226-232 1txf d1txfa1 A:106-116,184-190,190-202,203-207 1nnt d1nnta_ A:90-100,204-210,209-218,223-229 1eh3 d1eh3a_ A:90-100,205-211,210-219,226-232 2d3i d2d3ia1 A:90-100,204-210,209-218,223-229 2bjj d2bjjx1 X:91-101,206-212,211-220,227-233 1dot d1dota1 A:90-100,204-210,209-218,223-229 1lfg d1lfga1 A:90-100,205-211,210-219,226-232 1ovt d1ovta1 A:90-100,204-210,209-218,223-229 1ycj d1ycja1 A:534-544,732-738,738-750,751-755 2ypn d2ypna1 A:105-110,165-170,170-178,183-188 1gvc d1gvca_ A:95-103,207-213,212-221,246-250 1i6q d1i6qa1 A:90-100,205-211,210-219,226-232 1uiu d1uiua_ A:247-254,391-398,402-414,463-470 1hse d1hsea_ A:90-100,205-211,210-219,226-232 2h25 d2h25a1 A:114-118,223-227,228-236,242-246 1y20 d1y20a1 A:140-152,219-224,224-236,237-241 1pb9 d1pb9a_ A:140-152,219-224,224-236,237-241 2nvu d2nvub2 B:1114-1120,1224-1229,1229-1240,1242-1247 1b0l d1b0la1 A:90-100,205-211,210-219,226-232 1jnf d1jnfa1 A:93-103,201-207,206-215,222-228 1dsn d1dsna_ A:90-100,205-211,210-218,226-232 1mxw d1mxwb_ B:104-117,187-193,193-203,214-221 1nh7 d1nh7a1 A:87-98,150-156,158-166,166-170 1mxv d1mxvb_ B:104-117,187-193,193-203,214-221 1nnp d1nnpb_ B:101-114,184-190,190-200,211-218 1mxx d1mxxb_ B:104-117,187-193,193-203,214-221 1us4 d1us4a_ A:105-119,182-189,192-202,203-207 1vfe d1vfea_ A:90-100,205-211,210-219,226-232 1btj d1btja_ A:93-102,201-207,206-215,223-228 1mxy d1mxyb_ B:104-117,187-193,193-203,214-221 1tfd d1tfda_ A:93-103,201-207,206-215,222-228 1y4t d1y4td_ D:107-112,195-200,200-210,222-226 1mxv d1mxva_ A:104-117,187-193,193-203,214-221 1uiu d1uiua_ A:247-254,391-398,416-426,463-470 1y9u d1y9ua_ A:107-112,192-197,197-208,220-224 1mxx d1mxxa_ A:104-117,187-193,193-203,214-221 1my2 d1my2c_ C:104-117,187-193,193-203,214-221 2ows d2owsa1 A:107-112,192-197,197-208,220-224 1my1 d1my1c_ C:104-117,187-193,193-203,214-221 1nnk d1nnka_ A:101-114,184-190,190-200,211-218 1my2 d1my2a_ A:104-117,187-193,193-203,214-221 1my0 d1my0b_ B:104-117,187-193,193-203,214-221 1sd3 d1sd3b1 B:104-116,185-191,191-203,211-218 1my0 d1my0a_ A:104-117,187-193,193-203,214-221 1mxz d1mxza_ A:104-117,187-193,193-203,214-221 1my1 d1my1a_ A:104-117,187-193,193-203,214-221 1mqg d1mqga_ A:99-117,187-193,193-204,214-221 1ms7 d1ms7b_ B:101-114,184-190,190-200,211-218 1my0 d1my0c_ C:104-117,187-193,193-203,214-221 1y4t d1y4ta_ A:107-112,195-200,200-210,222-226 1us5 d1us5a_ A:105-119,182-189,192-203,203-207 3e3k d3e3kc1 C:246-254,391-399,416-426,463-470 1mxz d1mxzb_ B:104-117,187-193,193-203,214-221 1my1 d1my1b_ B:104-117,187-193,193-203,214-221 1wdn d1wdna_ A:83-96,152-157,157-170,172-176 1mxz d1mxzc_ C:104-117,187-193,193-203,214-221 2al4 d2al4e1 E:104-117,187-193,193-203,214-221 2al4 d2al4b1 B:104-117,187-193,193-203,214-221 1lbc d1lbcc_ C:104-117,187-193,193-203,214-221 2f36 d2f36d1 D:103-115,184-190,190-202,210-217 1s9t d1s9ta1 A:104-116,185-191,191-203,211-218 2al4 d2al4a1 A:104-117,187-193,193-203,214-221 2al4 d2al4d1 D:104-117,187-193,193-203,214-221 1lbc d1lbcb_ B:104-117,187-193,193-203,214-221 1s9t d1s9tb1 B:104-116,185-191,191-203,211-218 1nnp d1nnpa_ A:101-114,184-190,190-200,211-218 1oib d1oibb_ B:79-85,189-195,195-203,205-212 2d3i d2d3ia2 A:429-439,536-542,541-551,565-571 1y1m d1y1ma1 A:135-152,219-224,224-236,244-251 1i6b d1i6ba1 A:90-100,205-211,212-219,226-232 1uiu d1uiub_ B:1247-1254,1391-1397,1416-1426,1463-1470 1iit d1iita_ A:84-102,157-162,162-174,177-181 1aiv d1aiva2 A:431-439,536-542,541-551,585-589 1pb7 d1pb7a_ A:139-152,219-224,224-236,237-241 1ii5 d1ii5a_ A:84-102,157-162,162-174,177-181 3e3k d3e3kb1 B:246-254,391-397,416-426,463-471 1b3h d1b3ha_ A:270-278,410-418,422-431,478-492 1dpe d1dpea_ A:262-270,399-407,411-421,471-486 1pb8 d1pb8a_ A:139-152,219-224,224-236,237-241 1b6h d1b6ha_ A:270-278,410-418,422-431,478-492 1b5h d1b5ha_ A:270-278,410-418,422-431,478-492 1b40 d1b40a_ A:270-278,410-418,422-431,478-492 2a5t d2a5ta1 A:139-152,219-224,224-236,237-241 1fw0 d1fw0a_ A:100-117,187-193,193-203,214-221 1b05 d1b05a_ A:270-278,410-418,422-431,478-492 1ryx d1ryxa1 A:90-100,204-210,211-218,223-229 1y1z d1y1za1 A:139-152,219-224,224-236,237-241 1b3l d1b3la_ A:270-278,410-418,422-431,478-492 1b46 d1b46a_ A:270-278,410-418,422-431,478-492 1b1h d1b1ha_ A:270-278,410-418,422-431,478-492 2anj d2anja1 A:100-117,187-193,193-203,214-221 2p2a d2p2ab1 B:100-114,184-191,190-200,211-218 1b3l d1b3lc_ C:270-278,410-418,422-431,478-492 1nft d1nfta_ A:89-100,204-210,209-218,223-229 1mqh d1mqha_ A:100-117,187-193,193-204,214-221 1mm6 d1mm6b_ B:103-117,187-193,193-203,214-221 1si0 d1si0a_ A:95-108,191-197,206-217,216-220 1q35 d1q35a_ A:95-108,191-197,206-217,216-220 1ftk d1ftka_ A:116-128,203-209,209-219,230-237 1lbb d1lbba_ A:100-117,187-193,193-203,214-221 1iq7 d1iq7a_ A:428-439,536-542,541-549,565-571 2aix d2aixa1 A:100-114,184-190,190-201,211-218 1si1 d1si1a_ A:95-108,191-197,206-217,216-220 1tfa d1tfaa_ A:89-100,204-210,209-218,223-229 1mqg d1mqgb_ B:103-117,187-193,193-204,214-221 2onr d2onra1 A:106-113,283-290,295-308,326-330 1my4 d1my4c_ C:104-117,187-193,193-204,207-211 2ons d2onsa1 A:106-113,283-290,295-308,326-330 1gr2 d1gr2a_ A:116-128,203-209,209-220,230-237 1tt1 d1tt1a1 A:104-117,185-191,191-203,204-208 1mxx d1mxxc_ C:104-117,187-193,193-204,207-211 1my3 d1my3c_ C:104-117,187-193,193-204,207-211 1mxv d1mxvc_ C:104-117,187-193,193-204,207-211 1mxw d1mxwb_ B:104-117,187-193,193-203,207-211 1p1u d1p1ua_ A:104-117,187-193,193-204,207-211 1mxv d1mxvb_ B:104-117,187-193,193-203,207-211 1mxx d1mxxb_ B:104-117,187-193,193-203,207-211 1mxu d1mxuc_ C:104-117,187-193,193-204,207-211 1mxy d1mxyb_ B:104-117,187-193,193-203,207-211 1mxu d1mxub_ B:104-117,187-193,193-204,207-211 1sd3 d1sd3a1 A:104-117,185-191,191-203,204-208 1nnp d1nnpb_ B:101-114,184-190,190-200,204-208 1mqi d1mqia_ A:104-117,187-193,193-204,207-211 1my4 d1my4b_ B:104-117,187-193,193-204,207-211 1my3 d1my3b_ B:104-117,187-193,193-203,207-211 1mxy d1mxyc_ C:104-117,187-193,193-204,207-211 1mxy d1mxya_ A:104-117,187-193,193-204,207-211 1mxx d1mxxa_ A:104-117,187-193,193-203,207-211 1my0 d1my0b_ B:104-117,187-193,193-203,207-211 1my2 d1my2c_ C:104-117,187-193,193-203,207-211 1mm7 d1mm7c_ C:104-117,187-193,193-203,207-211 1ftl d1ftla_ A:100-117,187-193,193-203,214-221 1mxv d1mxva_ A:104-117,187-193,193-203,207-211 1my2 d1my2a_ A:104-117,187-193,193-203,207-211 1s7y d1s7yb1 B:104-117,185-191,191-203,204-208 1dpp d1dppe_ E:262-270,399-407,411-421,471-486 1dpp d1dppa_ A:262-270,399-407,411-421,471-486 1dpp d1dppc_ C:262-270,399-407,411-421,471-486 1dpp d1dppg_ G:262-270,399-407,411-421,471-486 1my0 d1my0a_ A:104-117,187-193,193-203,207-211 1mxz d1mxza_ A:104-117,187-193,193-203,207-211 1my1 d1my1a_ A:104-117,187-193,193-203,207-211 1ftm d1ftma_ A:104-117,187-193,193-203,207-211 1mxz d1mxzb_ B:104-117,187-193,193-203,207-211 1p1q d1p1qb_ B:104-117,187-193,193-204,207-211 1my1 d1my1b_ B:104-117,187-193,193-203,207-211 1lb9 d1lb9b_ B:100-117,187-193,193-203,214-221 1ms7 d1ms7b_ B:101-114,184-190,190-200,204-208 1m5b d1m5bb_ B:104-117,187-193,193-204,207-211 1my1 d1my1c_ C:104-117,187-193,193-203,207-211 1lb9 d1lb9a_ A:100-117,187-193,193-203,214-221 3bfu d3bfud1 D:104-117,187-193,193-204,207-211 1my0 d1my0c_ C:104-117,187-193,193-203,207-211 1nnk d1nnka_ A:101-114,184-190,190-200,204-208 1ms7 d1ms7c_ C:101-114,184-190,190-201,204-208 1ftm d1ftmb_ B:104-117,187-193,193-203,207-211 1ftj d1ftjb_ B:104-117,187-193,193-203,207-211 3bfu d3bfuc1 C:104-117,187-193,193-204,207-211 2al4 d2al4e1 E:104-117,187-193,193-203,207-211 2al4 d2al4b1 B:104-117,187-193,193-203,207-211 1ftj d1ftja_ A:104-117,187-193,193-203,207-211 1p1q d1p1qc_ C:104-117,187-193,193-204,207-211 1mxz d1mxzc_ C:104-117,187-193,193-203,207-211 1p1q d1p1qa_ A:104-117,187-193,193-204,207-211 1ftm d1ftmc_ C:104-117,187-193,193-203,207-211 3bfu d3bfua1 A:104-117,187-193,193-204,207-211 1m5b d1m5ba_ A:104-117,187-193,193-204,207-211 1ycj d1ycjb1 B:531-544,732-738,738-750,751-755 2p2a d2p2aa1 A:101-114,184-190,190-201,204-208 1m5b d1m5bc_ C:104-117,187-193,193-204,207-211 1lbc d1lbcc_ C:104-117,187-193,193-203,207-211 1mqd d1mqdb_ B:101-114,184-190,190-201,204-208 1jw1 d1jw1a1 A:91-100,205-211,220-227,226-232 2al4 d2al4a1 A:104-117,187-193,193-203,207-211 2al4 d2al4d1 D:104-117,187-193,193-203,207-211 3b7d d3b7dc1 C:100-117,187-193,193-204,214-221 3b7d d3b7de1 E:100-117,187-193,193-204,214-221 2al4 d2al4c1 C:104-117,187-193,193-203,207-211 1ola d1olaa_ A:270-278,410-418,422-431,479-492 1jev d1jeva_ A:270-278,410-418,422-431,479-492 2al4 d2al4f1 F:104-117,187-193,193-203,207-211 1xs5 d1xs5a_ A:81-88,201-208,225-237,240-244 1p1w d1p1wb_ B:104-117,187-193,193-203,207-211 1b32 d1b32a_ A:270-278,410-418,422-431,479-492 1lbc d1lbcb_ B:104-117,187-193,193-203,207-211 1nnp d1nnpa_ A:101-114,184-190,190-200,204-208 1qkb d1qkba_ A:270-278,410-418,422-431,479-492 2f36 d2f36a1 A:103-116,184-190,190-202,203-207 1bp5 d1bp5a_ A:93-103,201-207,216-223,222-228 1b5j d1b5ja_ A:270-278,410-418,422-431,479-492 1b0h d1b0ha_ A:270-278,410-418,422-431,479-492 1b5i d1b5ia_ A:270-278,410-418,422-431,479-492 1b3f d1b3fa_ A:270-278,410-418,422-431,479-492 1b4h d1b4ha_ A:270-278,410-418,422-431,479-492 1jet d1jeta_ A:270-278,410-418,422-431,479-492 1b9j d1b9ja_ A:270-278,410-418,422-431,479-492 1b2h d1b2ha_ A:270-278,410-418,422-431,479-492 1b4z d1b4za_ A:270-278,410-418,422-431,479-492 1b7h d1b7ha_ A:270-278,410-418,422-431,479-492 1b58 d1b58a_ A:270-278,410-418,422-431,479-492 1poy d1poy3_ 3:126-140,224-229,229-240,242-246 2olb d2olba_ A:270-278,410-418,422-431,479-492 1b51 d1b51a_ A:270-278,410-418,422-431,479-492 1olc d1olca_ A:270-278,410-418,422-431,479-492 1qka d1qkaa_ A:270-278,410-418,422-431,479-492 1n0t d1n0ta_ A:100-117,187-193,193-204,214-221 2a5t d2a5tb1 B:125-142,210-215,215-226,230-234 1b52 d1b52a_ A:270-278,410-418,422-431,479-492 1b3g d1b3ga_ A:270-278,410-418,422-431,479-492 1p1u d1p1ub_ B:100-117,187-193,193-204,214-221 1poy d1poy2_ 2:126-140,224-229,229-240,242-246 1poy d1poy1_ 1:126-140,224-229,229-240,242-246 2cmo d2cmoa1 A:100-117,187-193,193-204,214-221 1jeu d1jeua_ A:270-278,410-418,422-431,479-492 1poy d1poy4_ 4:126-140,224-229,229-240,242-246 2rkm d2rkma_ A:270-278,410-418,422-431,479-492 1pc3 d1pc3a_ A:96-113,220-227,226-237,238-246 3cr9 d3cr9a1 A:90-100,205-211,220-227,226-232 1pot d1pota_ A:126-140,224-229,229-240,242-246 1d9y d1d9ya_ A:95-109,188-194,193-205,210-215 1oqg d1oqga_ A:93-103,201-207,216-223,222-228 1fqf d1fqfa_ A:93-103,201-207,216-223,222-228 1pc3 d1pc3b_ B:96-112,220-227,226-237,238-246 1mqg d1mqga_ A:99-117,187-193,193-204,207-211 1jqf d1jqfa_ A:93-103,201-207,216-223,222-228 1ryo d1ryoa_ A:93-103,201-207,216-223,222-228 1xvx d1xvxa_ A:98-111,191-197,208-215,214-218 1oqh d1oqha_ A:93-103,201-207,216-223,222-228 1fqe d1fqea_ A:93-103,201-207,216-223,222-228 1dtg d1dtga_ A:93-103,201-207,216-223,222-228 1n84 d1n84a_ A:93-103,201-207,216-223,222-228 1iz1 d1iz1p2 P:154-171,238-244,243-250,253-260 1a8f d1a8fa_ A:93-103,201-207,216-223,222-228 1bp5 d1bp5d_ D:93-103,201-207,216-223,222-228 1bp5 d1bp5b_ B:93-102,201-207,216-223,223-228 1d3k d1d3ka_ A:93-103,201-207,216-223,222-228 1b3e d1b3ea_ A:93-103,201-207,216-223,222-228 1xc1 d1xc1e_ E:95-109,188-194,193-205,210-215 1mrp d1mrpa_ A:95-109,188-194,193-205,210-215 1i6q d1i6qa1 A:90-100,205-211,220-227,226-232 3thi d3thia_ A:107-121,234-239,239-247,252-257 1vfd d1vfda_ A:90-100,205-211,220-227,226-232 1dtz d1dtza1 A:90-100,205-211,220-227,226-232 1pbq d1pbqa_ A:135-152,219-224,224-236,237-241 1n7w d1n7wa_ A:93-103,201-207,216-223,222-228 1d4n d1d4na_ A:93-103,201-207,216-223,222-228 1n7x d1n7xa_ A:93-103,201-207,216-223,222-228 1ce2 d1ce2a1 A:90-100,205-211,220-227,226-232 1l5t d1l5tb_ B:90-100,205-211,220-227,226-232 1lcf d1lcfa1 A:90-100,205-211,220-227,226-232 1i6b d1i6ba1 A:90-100,205-211,220-227,226-232 1fqa d1fqaa_ A:105-119,223-228,228-239,241-246 1a8e d1a8ea_ A:93-103,201-207,216-223,222-228 1xc1 d1xc1b_ B:95-109,188-194,193-205,210-215 1xc1 d1xc1i_ I:95-109,188-194,193-205,210-215 1blf d1blfa1 A:90-100,205-211,220-227,226-232 1xc1 d1xc1h_ H:95-109,188-194,193-205,210-215 1l5t d1l5ta_ A:90-100,205-211,220-227,226-232 1ggg d1gggb_ B:79-96,152-157,157-170,172-176 1xc1 d1xc1c_ C:95-109,188-194,193-205,210-215 1iz1 d1iz1b2 B:154-171,238-244,243-250,253-260 4thi d4thia_ A:107-121,234-239,239-247,252-257 1h43 d1h43a_ A:90-100,205-211,220-227,226-232 1o7t d1o7ta_ A:95-109,188-194,193-205,210-215 1r1n d1r1nf_ F:95-109,188-194,193-205,210-215 1o7t d1o7tc_ C:95-109,188-194,193-205,210-215 1qjm d1qjma1 A:90-100,205-211,220-227,226-232 1lct d1lcta_ A:90-100,205-211,220-227,226-232 1o7t d1o7td_ D:95-109,188-194,193-205,210-215 2p2a d2p2ab1 B:100-114,184-191,190-200,204-208 1pbq d1pbqb_ B:135-152,219-224,224-236,237-241 1dsn d1dsna_ A:90-100,205-211,220-227,226-232 1o7t d1o7tf_ F:95-109,188-194,193-205,210-215 1biy d1biya1 A:90-100,205-211,220-227,226-232 1ggg d1ggga_ A:79-96,152-157,157-170,172-176 1d9v d1d9va_ A:95-109,188-194,193-205,210-215 1o7t d1o7ti_ I:95-109,188-194,193-205,210-215 1o7t d1o7th_ H:95-109,188-194,193-205,210-215 1sqy d1sqya1 A:90-100,205-211,220-227,226-232 1y1m d1y1ma1 A:135-152,219-224,224-236,237-241 1vfe d1vfea_ A:90-100,205-211,220-227,226-232 1us4 d1us4a_ A:105-119,182-189,192-202,238-254 1mm6 d1mm6b_ B:103-117,187-193,193-203,207-211 2aix d2aixa1 A:100-114,184-190,190-201,204-208 1o7t d1o7tb_ B:95-109,188-194,193-205,210-215 1si1 d1si1a_ A:95-108,191-197,196-207,216-220 1fw0 d1fw0a_ A:100-117,187-193,193-203,207-211 1hse d1hsea_ A:90-100,205-211,220-227,226-232 1b0l d1b0la1 A:90-100,205-211,220-227,226-232 1tfd d1tfda_ A:93-103,201-207,216-223,222-228 3dp8 d3dp8a1 A:246-254,391-399,443-462,463-470 3e3k d3e3ka1 A:246-254,391-399,443-462,463-470 1jw1 d1jw1a2 A:409-415,595-599,600-612,646-650 1us5 d1us5a_ A:105-119,182-189,192-203,238-254 2anj d2anja1 A:100-117,187-193,193-203,207-211 2owt d2owta1 A:98-112,192-198,211-221,220-224 3dp8 d3dp8b1 B:246-254,391-398,443-462,463-471 1mqg d1mqgb_ B:103-117,187-193,193-204,207-211 1mqh d1mqha_ A:100-117,187-193,193-204,207-211 1uiv d1uivb_ B:1246-1254,1391-1399,1443-1462,1463-1471 1uiu d1uiub_ B:1247-1254,1391-1397,1443-1462,1463-1470 1lbb d1lbba_ A:100-117,187-193,193-203,207-211 3e3k d3e3kb1 B:246-254,391-397,443-462,463-471 1zlq d1zlqa1 A:247-254,391-398,443-462,463-470 1vr5 d1vr5b1 B:272-283,428-433,485-504,505-515 1vr5 d1vr5a1 A:272-283,428-433,485-504,505-515 1ftl d1ftla_ A:100-117,187-193,193-203,207-211 1lb9 d1lb9a_ A:100-117,187-193,193-203,207-211 3b7d d3b7dc1 C:100-117,187-193,193-204,207-211 3b7d d3b7de1 E:100-117,187-193,193-204,207-211 1fto d1ftoa_ A:100-117,187-193,193-203,207-211 1lb9 d1lb9b_ B:100-117,187-193,193-203,207-211 1n0t d1n0ta_ A:100-117,187-193,193-204,207-211 1p1u d1p1ub_ B:100-117,187-193,193-204,207-211 1jw1 d1jw1a1 A:73-85,86-90,210-219,304-310 2cmo d2cmoa1 A:100-117,187-193,193-204,207-211 1fto d1ftob_ B:100-117,187-193,193-204,207-211 3bki d3bkid1 D:100-117,187-193,193-204,207-211 3bki d3bkip1 P:100-117,187-193,193-204,207-211 1n0t d1n0tb_ B:100-117,187-193,193-204,207-211 1p99 d1p99a_ A:109-119,237-244,261-273,276-280 72. d.193.1 Hsp33 domain Hsp33 domain 3 layers: beta/alpha/beta; buried helix 1vzy d1vzyb1 B:2-10,13-21,210-220,223-230 1vzy d1vzya1 A:2-10,13-21,210-220,223-231 1vq0 d1vq0a1 A:0-8,11-19,206-216,222-226 1vq0 d1vq0b1 B:0-8,11-19,206-216,222-226 76. b.62.1 Cyclophilin-like Cyclophilin-like barrel, closed; n=8, S=10; complex topology 1qoi d1qoia_ A:10-20,22-32,147-157,168-177 1mzw d1mzwa_ A:10-20,22-32,147-157,168-177 1qng d1qnga_ A:4-14,16-26,142-153,162-171 1iip d1iipa2 A:15-25,27-37,155-165,175-184 1m9x d1m9xf_ F:3-13,14-25,135-146,155-165 1e3b d1e3ba_ A:3-13,14-25,142-153,162-171 2igv d2igva1 A:3-13,14-25,142-153,162-171 1m9e d1m9eb_ B:3-13,14-25,135-146,155-164 2r99 d2r99a1 A:139-149,150-161,271-282,291-300 1zmf d1zmfa1 A:139-149,150-161,271-282,291-300 1m63 d1m63c_ C:3-13,14-25,135-146,155-164 1m9y d1m9yf_ F:3-13,14-25,135-146,155-165 1m9x d1m9xb_ B:3-13,14-25,135-146,155-165 1m9c d1m9cb_ B:3-13,14-25,135-146,155-165 1ak4 d1ak4a_ A:3-13,14-25,135-146,155-164 1awv d1awve_ E:1003-1013,1014-1025,1135-1146,1155-1165 2alf d2alfa1 A:3-13,14-25,135-146,155-164 1awr d1awrd_ D:1003-1013,1014-1025,1135-1146,1155-1165 1awq d1awqa_ A:1003-1013,1014-1025,1135-1146,1155-1165 1ak4 d1ak4b_ B:3-13,14-25,135-146,155-165 1ihg d1ihga2 A:15-25,27-37,155-165,175-184 2igw d2igwa1 A:3-13,14-25,142-153,162-171 1m9e d1m9ea_ A:3-13,14-25,135-146,155-164 1m9y d1m9ye_ E:3-13,14-25,135-146,155-164 1awr d1awrc_ C:1003-1013,1014-1025,1135-1146,1155-1165 1xo7 d1xo7b_ B:4-15,16-27,136-146,157-166 1m9y d1m9ya_ A:3-13,14-25,135-146,155-164 1m9f d1m9fb_ B:3-13,14-25,135-146,155-165 2bit d2bitx1 X:3-13,14-25,135-146,155-165 1c5f d1c5fg_ G:6-16,17-28,146-156,167-176 1cwo d1cwoa_ A:3-13,14-25,135-146,155-165 1m9c d1m9ca_ A:3-13,14-25,135-146,155-164 1m9d d1m9db_ B:3-13,14-25,135-146,155-164 1cwc d1cwca_ A:3-13,14-25,135-146,155-165 1mik d1mika_ A:3-13,14-25,135-146,155-165 1nmk d1nmka_ A:3-13,14-25,135-146,155-164 1cwb d1cwba_ A:3-13,14-25,135-146,155-165 1m9x d1m9xe_ E:3-13,14-25,135-146,155-164 1cwm d1cwma_ A:3-13,14-25,135-146,155-165 1m9f d1m9fa_ A:3-13,14-25,135-146,155-164 1bck d1bcka_ A:3-13,14-25,135-146,155-165 1awr d1awre_ E:1003-1013,1014-1025,1135-1146,1155-1165 1m9x d1m9xa_ A:3-13,14-25,135-146,155-164 2rma d2rmaq_ Q:3-13,14-25,135-146,155-165 1cwi d1cwia_ A:3-13,14-25,135-146,155-165 1awt d1awte_ E:1003-1013,1014-1025,1135-1146,1155-1165 1cwl d1cwla_ A:3-13,14-25,135-146,155-165 1c5f d1c5fe_ E:6-16,17-28,146-156,167-176 1c5f d1c5fc_ C:6-16,17-28,146-156,167-176 1cwa d1cwaa_ A:3-13,14-25,135-146,155-165 1awu d1awua_ A:1003-1013,1014-1025,1135-1146,1155-1165 2rmc d2rmcc_ C:37-47,48-59,169-179,190-200 1cwf d1cwfa_ A:3-13,14-25,135-146,155-165 1cwj d1cwja_ A:3-13,14-25,135-146,155-165 1cwk d1cwka_ A:3-13,14-25,135-146,155-165 2rma d2rmas_ S:3-13,14-25,135-146,155-165 2rma d2rmai_ I:3-13,14-25,135-146,155-165 1c5f d1c5fo_ O:6-16,17-28,146-156,167-176 1zkf d1zkfb1 B:3-13,14-25,135-146,155-165 1awt d1awtd_ D:1003-1013,1014-1025,1135-1146,1155-1165 1xq7 d1xq7c_ C:4-15,16-27,136-146,157-166 2rma d2rmao_ O:3-13,14-25,135-146,155-165 1ynd d1ynda1 A:3-13,14-25,135-146,155-165 1ynd d1yndb1 B:3-13,14-25,135-146,155-165 1mf8 d1mf8c_ C:3-13,14-25,135-146,155-164 2rmb d2rmbo_ O:3-13,14-25,135-146,155-165 1awv d1awvc_ C:1003-1013,1014-1025,1135-1146,1155-1165 1awr d1awra_ A:1003-1013,1014-1025,1135-1146,1155-1165 1awt d1awta_ A:1003-1013,1014-1025,1135-1146,1155-1165 2rmb d2rmbs_ S:3-13,14-25,135-146,155-165 1vbt d1vbtb_ B:3-13,14-25,135-146,155-165 2rmb d2rmbq_ Q:3-13,14-25,135-146,155-165 2rma d2rmaa_ A:3-13,14-25,135-146,155-165 1zkc d1zkca1 A:278-287,288-298,300-314,426-436 1awr d1awrb_ B:1003-1013,1014-1025,1135-1146,1155-1165 2cyh d2cyha_ A:3-13,14-25,135-146,155-165 1zkf d1zkfa1 A:3-13,14-25,135-146,155-165 1z81 d1z81a1 A:40-50,51-62,176-189,201-210 1xo7 d1xo7a_ A:4-15,16-27,136-146,157-166 4cyh d4cyha_ A:3-13,14-25,135-146,155-165 1rmh d1rmhb_ B:3-13,14-25,135-146,155-165 5cyh d5cyha_ A:3-13,14-25,135-146,155-165 1awv d1awvd_ D:1003-1013,1014-1025,1135-1146,1155-1165 3cyh d3cyha_ A:3-13,14-25,135-146,155-165 1xo7 d1xo7c_ C:4-15,16-27,136-146,157-166 1vbt d1vbta_ A:3-13,14-25,135-146,155-165 1xo7 d1xo7d_ D:4-15,16-27,136-146,157-166 1c5f d1c5fm_ M:6-16,17-28,146-156,167-176 1zkc d1zkcb1 B:278-287,288-298,300-314,426-436 1rmh d1rmha_ A:3-13,14-25,135-146,155-165 2oju d2ojub1 B:5-14,15-23,27-41,153-163 2rma d2rmae_ E:3-13,14-25,135-146,155-165 2rma d2rmag_ G:3-13,14-25,135-146,155-165 1h0p d1h0pa_ A:23-37,38-49,53-66,180-191 2rmb d2rmbi_ I:3-13,14-25,135-146,155-165 1vbs d1vbsa_ A:3-13,14-25,135-146,155-165 2rmb d2rmbc_ C:3-13,14-25,135-146,155-165 1w74 d1w74b_ B:13-22,24-31,35-48,174-182 2rma d2rmac_ C:3-13,14-25,135-146,155-165 1w74 d1w74a_ A:13-22,24-31,35-48,174-182 1xq7 d1xq7a_ A:2-15,16-27,31-44,157-166 1xq7 d1xq7b_ B:2-15,16-27,136-146,157-166 1awv d1awva_ A:1003-1013,1014-1025,1135-1146,1155-1165 2rma d2rmam_ M:3-13,14-25,135-146,155-165 1m63 d1m63g_ G:3-13,14-25,135-146,155-165 2rmb d2rmbm_ M:3-13,14-25,135-146,155-165 1xq7 d1xq7a_ A:2-15,16-27,136-146,157-166 1xq7 d1xq7b_ B:2-15,16-27,31-44,157-166 1a33 d1a33a_ A:5-16,17-29,32-45,167-176 1awv d1awvb_ B:1003-1013,1014-1025,1135-1146,1155-1165 1awt d1awtf_ F:1003-1013,1014-1025,1135-1146,1155-1165 2c3b d2c3ba1 A:3-11,18-28,137-151,163-171 1a58 d1a58a_ A:5-16,17-29,32-45,167-176 1e8k d1e8ka_ A:2-13,14-26,142-153,162-172 1e8k d1e8ka_ A:2-13,14-26,29-42,162-172 1m9d d1m9da_ A:2-13,14-26,29-42,155-164 2rmc d2rmca_ A:33-47,48-59,63-76,190-200 1h0p d1h0pa_ A:23-37,38-49,159-169,180-191 2rmc d2rmcg_ G:33-47,48-59,63-76,190-200 1vai d1vaib_ B:3-12,13-21,25-39,157-165 2esl d2esle1 E:33-47,48-59,63-76,190-201 1m9d d1m9da_ A:2-13,14-26,135-146,155-164 1awv d1awvf_ F:1003-1013,1014-1025,1135-1146,1155-1165 1c5f d1c5fi_ I:5-16,17-29,32-45,167-176 2esl d2esle1 E:33-47,48-59,169-179,190-201 1a33 d1a33a_ A:5-16,17-29,146-156,167-176 2rmc d2rmce_ E:33-47,48-59,63-76,190-200 1cyn d1cyna_ A:8-21,22-33,37-50,164-174 2rmc d2rmcg_ G:33-47,48-59,169-179,190-200 2rmc d2rmca_ A:33-47,48-59,169-179,190-200 1c5f d1c5fk_ K:5-16,17-29,32-45,167-176 1c5f d1c5fi_ I:5-16,17-29,146-156,167-176 1c5f d1c5fa_ A:5-16,17-29,32-45,167-176 2rmc d2rmce_ E:33-47,48-59,169-179,190-200 3cys d3cysa_ A:4-13,14-25,135-146,155-165 1c5f d1c5fk_ K:5-16,17-29,146-156,167-176 1a58 d1a58a_ A:5-16,17-29,146-156,167-176 1v9t d1v9ta_ A:4-12,13-21,25-39,157-165 1c5f d1c5fa_ A:5-16,17-29,146-156,167-176 1v9t d1v9tb_ B:4-12,13-21,25-39,157-165 2esl d2eslc1 C:33-47,48-59,63-76,190-200 1cyn d1cyna_ A:8-21,22-33,143-153,164-174 1qnh d1qnha_ A:3-14,15-27,30-43,162-170 2esl d2eslc1 C:33-47,48-59,169-179,190-200 1oca d1ocaa_ A:3-13,14-25,29-42,155-165 1awt d1awtb_ B:1002-1013,1014-1026,1029-1042,1155-1165 2fu0 d2fu0a1 A:6-13,14-22,26-40,151-159 3cys d3cysa_ A:95-101,111-117,119-127,126-132 1oca d1ocaa_ A:3-13,14-25,135-147,155-165 1dyw d1dywa_ A:2-13,14-27,142-153,162-172 1awt d1awtb_ B:1002-1013,1014-1026,1135-1146,1155-1165 1c5f d1c5fg_ G:6-16,17-28,32-45,167-176 2a2n d2a2nc1 C:492-499,500-508,512-526,638-646 2cfe d2cfea1 A:3-11,12-23,133-145,153-162 1dyw d1dywa_ A:2-13,14-27,29-42,162-172 2z6w d2z6wa1 A:3-13,14-25,135-147,155-165 1w8l d1w8la_ A:3-13,14-25,135-147,155-165 2biu d2biux1 X:3-13,14-25,135-147,155-165 2a2n d2a2na1 A:492-499,500-508,512-526,638-646 2z6w d2z6wb1 B:3-13,14-25,135-147,156-165 1w8m d1w8ma_ A:3-13,14-25,135-147,155-165 1z81 d1z81a1 A:137-143,153-159,161-169,169-175 1w8v d1w8va_ A:3-13,14-25,135-147,155-165 2esl d2eslb1 B:32-47,48-59,63-76,190-200 2esl d2esld1 D:32-47,48-59,63-76,190-200 2a2n d2a2nb1 B:492-499,500-508,512-526,638-646 1awt d1awtc_ C:1003-1013,1014-1025,1135-1147,1155-1165 1m9y d1m9yb_ B:3-13,14-25,135-147,155-165 1z81 d1z81a1 A:40-50,51-62,66-79,201-210 1vdn d1vdna1 A:2-11,12-23,133-145,153-162 2z6w d2z6wb1 B:3-13,14-25,29-42,156-165 2esl d2esla1 A:32-47,48-59,63-76,190-200 1awu d1awua_ A:1003-1013,1014-1025,1029-1042,1155-1165 1xwn d1xwna1 A:12-19,20-28,32-46,157-165 1c5f d1c5fe_ E:6-16,17-28,32-45,167-176 1qnh d1qnhb_ B:4-14,15-26,30-43,162-170 1awv d1awvf_ F:1003-1013,1014-1025,1029-1042,1155-1165 1m9d d1m9db_ B:3-13,14-25,29-42,155-164 1ist d1ista_ A:2-11,12-23,133-145,153-162 5cyh d5cyha_ A:3-13,14-25,29-42,155-165 1m9y d1m9yf_ F:3-13,14-25,29-42,155-165 1awr d1awrf_ F:1003-1013,1014-1025,1135-1147,1155-1165 1w8l d1w8la_ A:3-13,14-25,29-42,155-165 1awv d1awvd_ D:1003-1013,1014-1025,1029-1042,1155-1165 2cpl d2cpla_ A:3-13,14-25,135-147,155-165 2cyh d2cyha_ A:3-13,14-25,29-42,155-165 1e3b d1e3ba_ A:3-13,14-25,29-42,162-171 2rmb d2rmba_ A:3-13,14-25,29-42,155-165 2alf d2alfa1 A:3-13,14-25,29-42,155-164 1cwo d1cwoa_ A:3-13,14-25,29-42,155-165 1cwc d1cwca_ A:3-13,14-25,29-42,155-165 1qnh d1qnhb_ B:4-14,15-26,142-154,162-170 2rma d2rmai_ I:3-13,14-25,29-42,155-165 2rmb d2rmbc_ C:3-13,14-25,29-42,155-165 2oju d2ojua1 A:7-14,15-23,27-41,153-162 1m9c d1m9ca_ A:3-13,14-25,29-42,155-164 3cyh d3cyha_ A:3-13,14-25,29-42,155-165 1m9y d1m9ya_ A:3-13,14-25,29-42,155-164 1m63 d1m63c_ C:3-13,14-25,29-42,155-164 2rma d2rmao_ O:3-13,14-25,29-42,155-165 1m9x d1m9xe_ E:3-13,14-25,29-42,155-164 1ak4 d1ak4a_ A:3-13,14-25,29-42,155-164 1m9e d1m9eb_ B:3-13,14-25,29-42,155-164 1cwh d1cwha_ A:3-13,14-25,29-42,155-165 2rmb d2rmbe_ E:3-13,14-25,29-42,155-165 2rma d2rmaa_ A:3-13,14-25,29-42,155-165 1c5f d1c5fm_ M:6-16,17-28,32-45,167-176 1bck d1bcka_ A:3-13,14-25,29-42,155-165 1ynd d1yndb1 B:3-13,14-25,29-42,155-165 1m9x d1m9xf_ F:3-13,14-25,29-42,155-165 2igv d2igva1 A:3-13,14-25,29-42,162-171 1rmh d1rmha_ A:3-13,14-25,29-42,155-165 1w8m d1w8ma_ A:3-13,14-25,29-42,155-165 2rma d2rmak_ K:3-13,14-25,29-42,155-165 1m9f d1m9fa_ A:3-13,14-25,29-42,155-164 2rma d2rmas_ S:3-13,14-25,29-42,155-165 4cyh d4cyha_ A:3-13,14-25,29-42,155-165 2cpl d2cpla_ A:3-13,14-25,29-42,155-165 1cwm d1cwma_ A:3-13,14-25,29-42,155-165 1awv d1awva_ A:1003-1013,1014-1025,1029-1042,1155-1165 1mik d1mika_ A:3-13,14-25,29-42,155-165 1fgl d1fgla_ A:3-13,14-25,29-42,155-165 2biu d2biux1 X:3-13,14-25,29-42,155-165 1ihg d1ihga2 A:15-25,27-37,41-54,175-184 1mf8 d1mf8c_ C:3-13,14-25,29-42,155-164 1ist d1istb_ B:2-11,12-23,133-145,153-162 2rma d2rmaq_ Q:3-13,14-25,29-42,155-165 1m9x d1m9xa_ A:3-13,14-25,29-42,155-164 1ynd d1ynda1 A:3-13,14-25,29-42,155-165 1m9y d1m9ye_ E:3-13,14-25,29-42,155-164 2rma d2rmac_ C:3-13,14-25,29-42,155-165 1aws d1awsa_ A:1003-1013,1014-1025,1135-1147,1155-1165 1c5f d1c5fo_ O:6-16,17-28,32-45,167-176 2rmb d2rmbo_ O:3-13,14-25,29-42,155-165 1zkf d1zkfa1 A:3-13,14-25,29-42,155-165 1cwh d1cwha_ A:3-13,14-25,135-147,155-165 2esl d2eslf1 F:32-47,48-59,63-76,190-200 2rmb d2rmbi_ I:3-13,14-25,29-42,155-165 1m9e d1m9ea_ A:3-13,14-25,29-42,155-164 1awv d1awve_ E:1003-1013,1014-1025,1029-1042,1155-1165 1cwa d1cwaa_ A:3-13,14-25,29-42,155-165 2igw d2igwa1 A:3-13,14-25,29-42,162-171 1cwl d1cwla_ A:3-13,14-25,29-42,155-165 2esl d2esld1 D:32-47,48-59,169-179,190-200 1w8v d1w8va_ A:3-13,14-25,29-42,155-165 2rma d2rmae_ E:3-13,14-25,29-42,155-165 1ak4 d1ak4b_ B:3-13,14-25,29-42,155-165 1zkf d1zkfb1 B:3-13,14-25,29-42,155-165 1nmk d1nmka_ A:3-13,14-25,29-42,155-164 1m9y d1m9yb_ B:3-13,14-25,29-42,155-165 1cwk d1cwka_ A:3-13,14-25,29-42,155-165 2z6w d2z6wa1 A:3-13,14-25,29-42,155-165 1awq d1awqa_ A:1003-1013,1014-1025,1029-1042,1155-1165 1iip d1iipa2 A:15-25,27-37,41-54,175-184 2rma d2rmag_ G:3-13,14-25,29-42,155-165 1cwi d1cwia_ A:3-13,14-25,29-42,155-165 1cwb d1cwba_ A:3-13,14-25,29-42,155-165 1fgl d1fgla_ A:3-13,14-25,135-147,155-165 2rmb d2rmbe_ E:3-13,14-25,135-147,155-165 2rmb d2rmbm_ M:3-13,14-25,29-42,155-165 2esl d2eslb1 B:32-47,48-59,169-179,190-200 1cwf d1cwfa_ A:3-13,14-25,29-42,155-165 2r99 d2r99a1 A:139-149,150-161,165-178,291-300 2rma d2rmak_ K:3-13,14-25,135-147,155-165 2bit d2bitx1 X:3-13,14-25,29-42,155-165 1zmf d1zmfa1 A:139-149,150-161,165-178,291-300 2rmb d2rmbk_ K:3-13,14-25,135-147,155-165 1m9f d1m9fb_ B:3-13,14-25,29-42,155-165 2rma d2rmam_ M:3-13,14-25,29-42,155-165 1xo7 d1xo7b_ B:4-15,16-27,31-44,157-166 1awr d1awrd_ D:1003-1013,1014-1025,1029-1042,1155-1165 1m9c d1m9cb_ B:3-13,14-25,29-42,155-165 1qng d1qnga_ A:4-14,16-26,30-43,162-171 1vbs d1vbsa_ A:3-13,14-25,29-42,155-165 1mzw d1mzwa_ A:10-20,22-32,36-49,168-177 1xo7 d1xo7a_ A:4-15,16-27,31-44,157-166 1qoi d1qoia_ A:10-20,22-32,36-49,168-177 1c5f d1c5fc_ C:6-16,17-28,32-45,167-176 1m9x d1m9xb_ B:3-13,14-25,29-42,155-165 1vbt d1vbtb_ B:3-13,14-25,29-42,155-165 1awr d1awra_ A:1003-1013,1014-1025,1029-1042,1155-1165 2rmb d2rmbk_ K:3-13,14-25,29-42,155-165 2rmb d2rmbs_ S:3-13,14-25,29-42,155-165 1j2a d1j2aa_ A:4-12,13-21,25-39,156-165 1awv d1awvc_ C:1003-1013,1014-1025,1029-1042,1155-1165 1awr d1awrc_ C:1003-1013,1014-1025,1029-1042,1155-1165 1cwj d1cwja_ A:3-13,14-25,29-42,155-165 1rmh d1rmhb_ B:3-13,14-25,29-42,155-165 1m63 d1m63g_ G:3-13,14-25,29-42,155-165 1xo7 d1xo7d_ D:4-15,16-27,31-44,157-166 1awv d1awvb_ B:1003-1013,1014-1025,1029-1042,1155-1165 1nmk d1nmkb_ B:3-13,14-25,29-42,155-165 1vbt d1vbta_ A:3-13,14-25,29-42,155-165 1awr d1awrf_ F:1003-1013,1014-1025,1029-1042,1155-1165 1nmk d1nmkb_ B:3-13,14-25,135-147,155-165 2rmb d2rmbg_ G:3-13,14-25,29-42,155-165 1awr d1awre_ E:1003-1013,1014-1025,1029-1042,1155-1165 2rmc d2rmcc_ C:37-47,48-59,63-76,190-200 1xo7 d1xo7c_ C:4-15,16-27,31-44,157-166 2rmb d2rmbq_ Q:3-13,14-25,29-42,155-165 1xq7 d1xq7c_ C:4-15,16-27,31-44,157-166 2esl d2esla1 A:32-47,48-59,169-179,190-200 2ok3 d2ok3a1 A:1-8,9-17,21-35,147-155 2rmb d2rmbg_ G:3-13,14-25,135-147,155-165 1awt d1awtf_ F:1003-1013,1014-1025,1029-1042,1155-1165 2rmb d2rmba_ A:3-13,14-25,135-147,155-165 1awr d1awrb_ B:1003-1013,1014-1025,1029-1042,1155-1165 1awt d1awte_ E:1003-1013,1014-1025,1029-1042,1155-1165 2esl d2eslf1 F:32-47,48-59,169-179,190-200 1awt d1awtd_ D:1003-1013,1014-1025,1029-1042,1155-1165 1aws d1awsa_ A:1003-1013,1014-1025,1029-1042,1155-1165 1awt d1awtc_ C:1003-1013,1014-1025,1029-1042,1155-1165 2b71 d2b71a1 A:39-46,48-55,59-73,184-191 1awt d1awta_ A:1003-1013,1014-1025,1029-1042,1155-1165 2nul d2nula_ A:1-7,8-16,129-139,155-163 2c3b d2c3bb1 B:3-11,18-28,137-152,163-171 1vai d1vaia_ A:5-12,13-21,25-39,157-165 1lop d1lopa_ A:1-7,8-16,129-139,155-163 1xyh d1xyha1 A:1-8,9-17,21-35,147-155 1qnh d1qnha_ A:3-14,15-27,142-154,162-170 2oju d2ojua1 A:7-14,15-23,130-140,153-162 2ok3 d2ok3a1 A:1-8,9-17,124-134,147-155 1w74 d1w74b_ B:13-22,24-31,149-162,174-182 1w74 d1w74a_ A:13-22,24-31,149-162,174-182 2a2n d2a2nb1 B:492-499,500-508,615-625,638-646 1vdn d1vdna1 A:2-11,12-23,27-40,153-162 1ist d1istb_ B:2-11,12-23,27-40,153-162 1vai d1vaia_ A:5-12,13-21,131-141,157-165 1vai d1vaib_ B:3-12,13-21,131-141,157-165 1v9t d1v9ta_ A:4-12,13-21,131-141,157-165 1xyh d1xyha1 A:1-8,9-17,124-134,147-155 1v9t d1v9tb_ B:4-12,13-21,131-141,157-165 1ist d1ista_ A:2-11,12-23,27-40,153-162 2a2n d2a2na1 A:492-499,500-508,615-625,638-646 2b71 d2b71a1 A:39-46,48-55,162-172,184-191 2a2n d2a2nc1 C:492-499,500-508,615-625,638-646 2nul d2nula_ A:1-7,8-16,20-34,155-163 3cys d3cysa_ A:4-13,14-25,29-42,155-165 2fu0 d2fu0a1 A:6-13,14-22,129-139,151-159 1lop d1lopa_ A:1-7,8-16,20-34,155-163 2oju d2ojub1 B:5-14,15-23,130-140,153-163 1clh d1clha_ A:5-12,13-20,131-142,157-166 1clh d1clha_ A:5-12,13-20,25-38,157-166 1j2a d1j2aa_ A:4-12,13-21,131-141,156-165 2cfe d2cfea1 A:3-11,12-23,27-40,153-162 1zkc d1zkcb1 B:278-287,288-298,403-414,426-436 1zkc d1zkca1 A:278-287,288-298,403-414,426-436 2c3b d2c3bb1 B:3-11,18-28,32-45,163-171 2c3b d2c3ba1 A:3-11,18-28,32-45,163-171 1xwn d1xwna1 A:12-19,20-28,133-146,157-165 77. c.143.1 CofD-like CofD-like 3 layers: a/b/a, parallel beta-sheet of 7 strands, order 3214567; topological similarity to the CobT-like fold (scop_cf 52732) 2hzb d2hzba1 A:131-137,139-144,144-152,154-161 2hzb d2hzbc1 C:131-137,139-144,144-152,154-161 2hzb d2hzbd1 D:131-137,139-144,144-152,154-161 2hzb d2hzbb1 B:131-137,139-144,144-152,154-161 78. e.24.1 Ribosomal protein L1 Ribosomal protein L1 2 domains: (1) alpha+beta; (2) alpha/beta (interrupts domain 1) 2v47 d2v47c1 C:40-47,173-178,187-201,207-215 1zho d1zhoa1 A:39-48,169-178,181-200,208-217 1zho d1zhog1 G:39-48,169-178,181-200,208-217 1u63 d1u63c1 C:24-33,158-167,170-190,195-204 2hw8 d2hw8a1 A:39-48,169-178,181-200,208-217 1mzp d1mzpa_ A:28-37,163-172,175-195,199-208 1dwu d1dwub_ B:24-33,158-167,170-190,195-204 1yl3 d1yl3c1 C:39-48,169-178,181-200,208-216 1dwu d1dwua_ A:24-33,158-167,170-190,195-204 1zho d1zhoe1 E:39-48,169-178,181-200,208-217 1ad2 d1ad2a_ A:39-48,169-178,181-200,208-217 1cjs d1cjsa_ A:24-33,158-167,170-190,195-204 1i2a d1i2aa_ A:24-33,158-167,170-190,195-204 1zho d1zhoc1 C:39-48,169-178,181-200,208-217 1u63 d1u63a1 A:24-33,158-167,170-189,195-204 2hgq d2hgqc1 C:40-48,169-174,181-200,208-217 2hgu d2hguc1 C:40-48,169-174,181-200,208-217 2om7 d2om7k1 K:40-45,174-178,183-201,210-215 2j03 d2j03c1 C:40-45,174-178,183-201,210-215 2j01 d2j01c1 C:40-45,174-178,183-201,210-215 2hgj d2hgjc1 C:40-48,169-174,181-200,208-217 1vsp d1vspa1 A:40-49,173-179,182-201,209-218 1vsa d1vsaa1 A:40-49,175-179,182-201,209-218 79. d.58.20 NAD-binding domain of HMG-CoA reductase Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1qay d1qaya1 A:111-120,169-181,197-206,207-215 1qay d1qayb1 B:611-620,669-681,697-706,707-715 1r7i d1r7ib1 B:611-620,669-681,697-706,707-715 1t02 d1t02a1 A:111-120,169-181,197-206,207-215 1t02 d1t02b1 B:111-120,169-181,197-206,207-215 1r7i d1r7ia1 A:111-120,169-181,197-206,207-215 1qax d1qaxb1 B:611-620,669-681,697-706,707-715 1qax d1qaxa1 A:111-120,169-181,197-206,207-215 1r31 d1r31b1 B:611-620,669-681,697-706,707-715 1qay d1qayb1 B:611-620,669-681,686-698,707-715 1qay d1qaya1 A:111-120,169-181,186-198,207-215 1t02 d1t02a1 A:111-120,169-181,186-198,207-215 1qax d1qaxb1 B:611-620,669-681,686-698,707-715 1qax d1qaxa1 A:111-120,169-181,186-198,207-215 1t02 d1t02b1 B:111-120,169-181,186-198,207-215 1r31 d1r31b1 B:611-620,669-681,686-698,707-715 1r7i d1r7ib1 B:611-620,669-681,686-698,707-715 1r7i d1r7ia1 A:111-120,169-181,186-198,207-215 1r31 d1r31a1 A:110-120,169-181,197-206,207-215 1r31 d1r31a1 A:110-120,169-181,186-198,207-215 1dq9 d1dq9b1 B:578-596,641-650,656-676,678-684 1dq9 d1dq9a1 A:578-596,641-650,656-676,678-684 1dq9 d1dq9c1 C:578-596,641-650,656-676,678-684 1dq9 d1dq9d1 D:578-596,641-650,656-676,678-684 1hw9 d1hw9b1 B:578-596,641-650,656-676,678-684 1hw9 d1hw9a1 A:578-596,641-650,656-676,678-684 1hw9 d1hw9c1 C:578-596,641-650,656-676,678-684 1hwl d1hwlc1 C:578-596,641-650,656-676,678-684 1hwl d1hwlb1 B:578-596,641-650,656-676,678-684 1dq8 d1dq8c1 C:578-596,641-650,656-676,678-684 1hwl d1hwla1 A:578-596,641-650,656-676,678-684 1hwj d1hwjc1 C:578-596,641-651,656-676,678-684 1dq8 d1dq8a1 A:578-596,641-651,656-676,678-684 1hwk d1hwkb1 B:578-596,641-650,656-676,678-684 1hwj d1hwja1 A:578-596,641-650,656-676,678-684 1hwk d1hwka1 A:578-596,641-650,656-676,678-684 1hwj d1hwjb1 B:578-596,641-650,656-676,678-684 1dqa d1dqac1 C:578-596,641-652,656-676,678-684 1dqa d1dqad1 D:578-596,641-652,656-676,678-684 1dqa d1dqaa1 A:578-596,641-652,656-676,678-684 1dq8 d1dq8d1 D:578-596,641-652,656-676,678-684 1hwk d1hwkd1 D:578-596,641-652,656-676,678-684 1hw9 d1hw9d1 D:578-596,641-652,656-676,678-684 1hw8 d1hw8c1 C:578-596,641-652,656-676,678-684 1dqa d1dqab1 B:578-596,641-652,656-676,678-684 1dq8 d1dq8b1 B:578-596,641-652,656-676,678-684 1hw8 d1hw8a1 A:578-596,641-652,656-676,678-684 1hwl d1hwld1 D:578-596,641-652,656-676,678-684 1hw8 d1hw8d1 D:578-596,641-652,656-676,678-684 1hwk d1hwkc1 C:578-596,641-652,656-676,678-684 1hwi d1hwic1 C:578-596,641-652,656-676,678-684 1hwi d1hwid1 D:578-596,641-652,656-676,678-684 1hwi d1hwib1 B:578-596,641-652,656-676,678-684 1hw8 d1hw8b1 B:578-596,641-652,656-676,678-684 1hwi d1hwia1 A:578-596,641-652,656-676,678-684 1hwj d1hwjd1 D:578-596,641-652,656-676,678-684 80. d.346.1 SARS Nsp1-like SARS Nsp1-like complex alpha+beta fold; contains mixed beta-sheet barrel, n=6, S=10 2gdt d2gdta1 A:55-63,74-82,83-90,91-99 2hsx d2hsxa1 A:55-63,74-82,83-90,91-99 83. e.57.1 Vacuolar ATP synthase subunit C Vacuolar ATP synthase subunit C 2 alpha+beta (sub)domains [each has a ferredoxin-like fold; scop_cf 54861], connected with 3-helical bundle; duplication: two repeats of beta-alpha-beta-[alpha coiled-coil]-beta-alpha-beta motif 1u7l d1u7la_ A:9-18,324-332,333-349,386-392 87. d.264.1 Prim-pol domain Prim-pol domain consists of two alpha+beta domains 2atz d2atza1 A:73-80,111-118,123-143,145-150 1zt2 d1zt2a1 A:281-288,304-310,310-321,322-329 1g71 d1g71b_ B:36-41,47-52,55-67,69-75 1g71 d1g71a_ A:36-41,47-52,55-67,69-75 1v33 d1v33a_ A:36-41,47-52,55-67,68-75 2atz d2atza1 A:14-20,37-45,46-56,59-64 1v34 d1v34a_ A:36-41,47-52,55-67,68-75 1zt2 d1zt2a1 A:37-42,48-53,56-69,70-78 89. d.272.1 Dystroglycan, domain 2 Dystroglycan, domain 2 beta-alpha-beta-X-beta(2)-alpha(2)-beta; antiparallel beta-sheet, order 24153; topological similarity to the ferredoxin-like fold (scop_cf 54861) 1u2c d1u2ca2 A:185-195,252-263,271-282,291-301 91. d.265.1 Pseudouridine synthase the active site is the most conserved structural region of the superfamily and is located between the subdomains ! Pseudouridine synthase consists of two alpha+beta subdomains with some similarity to the ferredoxin-like fold 1vio d1viob1 B:129-138,172-179,184-194,195-206 1vio d1vioa1 A:129-138,172-179,184-194,195-206 1ze1 d1ze1c2 C:64-74,157-166,170-183,185-197 1r3f d1r3fa2 A:72-83,166-176,179-192,194-206 1ksl d1ksla4 A:129-138,172-179,184-194,195-206 1ksv d1ksva4 A:129-138,172-179,184-194,195-206 1ksk d1kska4 A:129-138,172-179,184-194,195-206 1k8w d1k8wa5 A:72-83,166-176,179-192,194-206 1ze1 d1ze1b2 B:64-74,157-166,170-183,185-197 2nr0 d2nr0a1 A:9-21,62-75,79-91,94-103 1ze1 d1ze1a2 A:64-74,157-166,170-183,185-197 1r3e d1r3ea2 A:72-83,166-176,179-192,194-206 1zl3 d1zl3a2 A:72-83,166-176,179-192,194-206 1ze2 d1ze2a2 A:63-74,157-167,170-183,185-197 2ab4 d2ab4a2 A:63-74,157-167,170-183,185-197 2nre d2nrea1 A:114-124,188-198,202-217,244-252 2nqp d2nqpd1 D:113-125,188-198,202-217,244-252 2nqp d2nqpc1 C:113-125,188-197,202-217,244-252 2nqp d2nqpb1 B:113-125,188-197,202-217,244-252 2ey4 d2ey4b2 B:109-121,169-179,182-195,196-209 1ze1 d1ze1d2 D:64-74,157-166,170-183,185-197 2nqp d2nqpa1 A:113-125,188-197,202-217,244-252 2nr0 d2nr0b1 B:9-21,66-75,79-92,94-103 2nr0 d2nr0d1 D:113-125,188-197,202-217,244-252 2rfk d2rfka2 A:109-121,169-179,182-195,196-209 1dj0 d1dj0b_ B:113-125,188-197,202-217,244-252 2hvy d2hvya2 A:109-121,169-179,182-195,196-209 2nr0 d2nr0b1 B:113-125,188-197,202-217,244-252 2nr0 d2nr0c1 C:9-21,66-75,79-91,94-103 2ey4 d2ey4a2 A:109-121,169-179,182-195,196-209 2nr0 d2nr0a1 A:113-125,188-197,202-217,244-252 1dj0 d1dj0a_ A:113-125,188-197,202-217,245-252 2nr0 d2nr0c1 C:113-125,188-197,202-217,244-252 2nqp d2nqpc1 C:9-21,64-75,79-92,94-103 2nqp d2nqpa1 A:9-21,64-75,79-92,94-103 2nqp d2nqpd1 D:9-21,64-75,79-92,94-103 2nqp d2nqpb1 B:9-21,64-75,79-92,94-103 2apo d2apoa2 A:106-117,165-174,178-191,192-205 2nre d2nrea1 A:9-21,68-72,79-92,94-103 1dj0 d1dj0b_ B:9-21,66-75,79-92,94-103 2nr0 d2nr0d1 D:9-21,66-75,79-91,94-103 1dj0 d1dj0a_ A:9-21,68-75,79-92,94-103 1sgv d1sgva2 A:67-77,163-174,178-191,193-205 2nr0 d2nr0b1 B:9-21,62-66,79-92,94-103 1sb7 d1sb7b_ B:221-228,232-237,240-251,252-261 2nr0 d2nr0c1 C:9-21,62-66,79-91,94-103 2nre d2nrea1 A:9-21,62-67,79-92,94-103 1szw d1szwa_ A:221-228,232-237,240-251,252-261 1szw d1szwb_ B:221-228,232-237,240-251,252-261 2nr0 d2nr0d1 D:9-21,62-66,79-91,94-103 1si7 d1si7a_ A:221-228,232-237,240-251,252-262 1sb7 d1sb7a_ A:221-228,232-237,240-251,252-262 1sgv d1sgvb2 B:66-77,163-175,178-191,193-205 1dj0 d1dj0b_ B:9-21,62-66,79-92,94-103 1v9k d1v9ka_ A:172-182,228-238,242-252,281-293 1v9f d1v9fa_ A:167-178,220-230,234-244,278-290 1v9k d1v9kb_ B:172-182,228-238,242-252,281-293 1prz d1prza_ A:167-178,220-230,234-244,278-290 1qyu d1qyua_ A:167-178,220-230,234-244,278-290 92. d.45.1 ClpS-like ClpS-like beta-alpha(2)-beta-alpha-beta; 2 layers, alpha/beta 1rqu d1rqua2 A:53-62,91-99,99-114,114-120 1rqu d1rqub2 B:53-62,91-99,99-114,114-120 1rqv d1rqvb2 B:52-62,91-99,99-114,114-120 2zjq d2zjq51 5:56-65,93-101,101-116,116-122 1rqs d1rqsa_ A:53-62,91-97,99-114,114-120 1mg9 d1mg9a_ A:27-34,69-77,77-96,100-106 1mbv d1mbvb_ B:27-34,69-77,77-96,99-106 1rqv d1rqva2 A:52-62,91-99,99-114,114-120 1lzw d1lzwa_ A:12-19,54-62,62-81,85-91 1dd4 d1dd4a2 A:58-67,100-107,107-122,122-128 1r6q d1r6qc1 C:27-34,69-77,77-96,100-106 1mbu d1mbuc_ C:27-34,69-77,77-96,100-106 1mbx d1mbxc_ C:27-34,69-77,77-96,100-106 1mbu d1mbud_ D:27-34,69-77,77-96,100-106 1dd3 d1dd3b2 B:58-67,100-107,107-122,122-128 1r6o d1r6oc1 C:27-34,69-77,77-96,100-106 1r6q d1r6qd1 D:27-34,69-77,77-96,100-106 1r6o d1r6od1 D:27-34,69-77,77-96,100-106 1mbx d1mbxd_ D:27-34,69-77,77-96,100-106 1dd3 d1dd3a2 A:58-67,100-107,107-122,122-128 2bcw d2bcwb1 B:54-61,90-97,99-114,115-120 1ctf d1ctfa_ A:54-61,90-97,99-114,115-120 1yl3 d1yl3i2 I:58-67,102-107,107-122,122-128 1yl3 d1yl3j2 J:58-67,102-107,107-122,122-128 2gya d2gya52 5:54-62,92-97,99-114,114-120 2gyc d2gyc52 5:54-62,92-97,99-114,114-119 1dd4 d1dd4b2 B:60-67,100-107,107-122,122-128 93. d.280.1 Sulfolobus fructose-1,6-bisphosphatase-like Sulfolobus fructose-1,6-bisphosphatase-like 4 layers: a/b/b/a; antiparallel beta sheets; similarities to ferredoxin-like fold (scop_cf 54861) in the N-terminal part (1-120) and to the Bacterial S-adenosylmethionine decarboxylase subunit (scop_fa 997656) in the C-terminal part (121-340) 1umg d1umga_ A:165-174,175-183,186-197,199-209 1umg d1umga_ A:124-133,234-241,247-258,290-301 1umg d1umga_ A:3-12,53-62,67-89,111-119 96. d.58.59 Rnp2-like contains extra C-terminal helix Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2czv d2czvd1 D:15-25,65-74,76-88,95-104 2czv d2czvc1 C:15-25,65-74,76-88,95-104 2av5 d2av5c1 C:15-25,65-74,74-87,92-104 2av5 d2av5a1 A:15-25,65-74,74-87,92-104 2av5 d2av5d1 D:15-25,65-74,74-87,92-104 2av5 d2av5e1 E:15-25,65-74,74-87,92-104 2av5 d2av5b1 B:15-25,65-74,74-87,92-104 97. d.156.1 S-adenosylmethionine decarboxylase S-adenosylmethionine decarboxylase duplication of beta-alpha-beta(4)-alpha-beta-alpha-beta(2) motif; 4 layers a/b/b/a; antiparallel beta-sheets: order 23451687 1vr7 d1vr7a1 A:4-14,73-84,88-101,103-113 1mhm d1mhm.1 A:182-190,255-265,272-285,287-296 1tlu d1tlub_ B:4-14,73-84,88-101,103-113 1tlu d1tlua_ A:4-14,73-83,88-101,103-113 1tmi d1tmib_ B:4-14,73-83,88-101,103-113 1tmi d1tmia_ A:4-14,73-83,88-101,103-113 1vr7 d1vr7b1 B:4-14,73-83,88-101,103-113 1msv d1msvb_ B:11-20,75-82,86-103,105-116 1jl0 d1jl0a_ A:11-20,75-82,86-103,105-116 1jl0 d1jl0b_ B:11-20,75-82,86-103,105-116 1msv d1msva_ A:11-20,75-82,86-103,105-116 1i79 d1i79.1 A:174-183,249-258,263-276,278-287 1i7b d1i7b.1 A:174-183,249-258,263-276,278-287 1i72 d1i72.1 A:174-183,249-258,263-276,278-287 1jl0 d1jl0b_ B:174-183,249-258,263-276,278-287 1jl0 d1jl0a_ A:174-183,249-258,263-276,278-287 1jen d1jen.3 A:174-183,249-258,263-276,278-287 1jen d1jen.4 C:174-183,249-258,263-276,278-287 1msv d1msvb_ B:174-183,249-258,263-276,278-287 1msv d1msva_ A:174-183,249-258,263-276,278-287 1i7m d1i7m.2 C:1174-1183,1249-1258,1263-1276,1278-1288 1i7m d1i7m.1 A:174-183,249-258,263-276,278-288 1i7c d1i7c.1 A:174-183,249-258,263-276,278-288 98. d.58.2 Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2air d2airh1 H:14-23,53-63,67-79,81-87 2fzk d2fzkd1 D:13-20,54-63,67-75,81-88 1q95 d1q95h1 H:14-20,54-63,67-79,81-88 1r0c d1r0cb1 B:14-23,55-63,67-79,81-87 1i5o d1i5ob1 B:13-20,54-63,67-79,81-88 1r0c d1r0ch1 H:14-22,55-63,67-79,81-87 1i5o d1i5od1 D:13-23,54-63,67-79,81-89 1q95 d1q95i1 I:15-23,55-63,72-79,81-85 3at1 d3at1d1 D:13-23,55-63,67-75,81-89 2fzc d2fzcb1 B:13-23,54-63,67-79,81-89 2qgf d2qgfb1 B:13-20,54-63,67-79,81-89 8atc d8atcd1 D:13-23,54-63,67-79,81-89 1xjw d1xjwb1 B:13-23,54-63,67-79,81-88 6at1 d6at1d1 D:13-23,54-63,67-79,81-89 6at1 d6at1b1 B:13-23,55-63,67-79,81-88 1d09 d1d09b1 B:13-23,54-63,67-79,81-88 1r0b d1r0bi1 I:13-23,55-63,67-79,81-88 1tu0 d1tu0d1 D:13-23,54-63,67-79,81-89 2ipo d2ipob1 B:13-20,54-63,67-79,81-88 1tug d1tugd1 D:13-23,54-63,67-79,81-89 2qgf d2qgfd1 D:13-20,54-63,67-79,81-88 1r0b d1r0bj1 J:13-20,55-63,67-79,81-88 2qg9 d2qg9b1 B:14-20,54-63,67-79,81-88 1ezz d1ezzd1 D:13-20,54-63,67-75,81-88 2ipo d2ipod1 D:13-23,54-63,67-79,81-89 5at1 d5at1b1 B:13-23,55-63,67-79,81-88 2air d2airb1 B:15-23,55-63,67-79,81-87 1tth d1tthd1 D:13-23,54-63,67-79,81-89 1sku d1skud1 D:13-20,55-62,67-79,81-88 7at1 d7at1b1 B:13-23,54-63,67-79,81-88 1rac d1racd1 D:13-23,54-63,67-75,81-89 1rae d1raed1 D:13-23,54-63,67-75,81-89 5at1 d5at1d1 D:13-23,54-63,67-79,81-89 7at1 d7at1d1 D:13-20,54-63,67-79,81-88 1r0b d1r0bg1 G:13-22,54-63,67-79,81-88 1f1b d1f1bb1 B:14-23,54-63,67-79,81-88 2hse d2hsed1 D:13-23,54-63,70-79,81-88 4at1 d4at1b1 B:13-23,54-63,67-79,81-88 1raf d1rafd1 D:13-23,54-63,67-75,81-89 1rab d1rabd1 D:13-23,54-63,67-75,81-89 1rad d1radd1 D:13-23,54-63,67-75,81-89 1acm d1acmd1 D:13-23,54-63,67-79,81-88 1raf d1rafb1 B:13-23,54-63,67-79,81-88 3at1 d3at1b1 B:13-23,55-63,67-79,81-88 1raa d1raad1 D:13-23,54-63,67-75,81-89 1at1 d1at1d1 D:13-23,54-63,67-79,81-88 2at1 d2at1b1 B:13-23,54-63,67-79,81-88 2at1 d2at1d1 D:13-23,54-63,67-79,81-88 2fzc d2fzcd1 D:13-23,54-62,67-79,81-88 8at1 d8at1d1 D:13-23,54-63,67-79,81-88 1rag d1ragd1 D:13-23,54-63,67-75,81-89 1q95 d1q95k1 K:13-23,54-63,70-79,81-88 1tth d1tthb1 B:13-23,54-63,67-79,81-88 1tu0 d1tu0b1 B:13-23,54-63,67-79,81-88 8atc d8atcb1 B:13-23,54-63,67-79,81-88 2fzk d2fzkb1 B:14-20,54-62,67-79,81-87 2a0f d2a0fd1 D:13-20,54-63,67-75,81-88 1at1 d1at1b1 B:13-23,54-63,67-79,81-88 1q95 d1q95g1 G:13-23,53-63,67-79,81-89 8at1 d8at1b1 B:13-23,54-63,67-79,81-88 1nbe d1nbeb1 B:13-23,54-63,67-79,81-88 2h3e d2h3eb1 B:13-23,54-63,67-79,81-88 1r0b d1r0bk1 K:13-22,54-63,67-79,81-88 1rad d1radb1 B:13-23,54-63,67-75,81-88 4at1 d4at1d1 D:13-23,54-63,67-79,81-88 2hse d2hseb1 B:13-22,54-63,67-79,81-88 1za1 d1za1d1 D:13-23,54-63,67-79,81-88 1pg5 d1pg5b1 B:16-26,58-67,71-83,85-92 1rae d1raeb1 B:13-22,54-63,67-79,81-88 2be9 d2be9b1 B:16-26,58-67,71-83,85-92 2h3e d2h3ed1 D:13-23,54-63,67-79,81-88 2a0f d2a0fb1 B:14-22,54-62,67-75,81-88 1acm d1acmb1 B:13-22,54-63,67-79,81-88 1za1 d1za1b1 B:13-22,54-63,67-79,81-88 2fzg d2fzgb1 B:13-23,54-63,67-79,81-88 2qg9 d2qg9d1 D:13-23,54-63,67-79,81-88 1xjw d1xjwd1 D:13-23,54-63,67-79,81-88 1q95 d1q95j1 J:13-23,54-63,67-79,81-88 2fzg d2fzgd1 D:13-23,54-63,67-79,81-88 1nbe d1nbed1 D:13-23,54-63,67-79,81-88 1f1b d1f1bd1 D:13-22,54-63,67-79,81-88 1rag d1ragb1 B:13-23,54-63,67-75,81-88 1rab d1rabb1 B:13-22,54-63,67-75,81-88 1rai d1raib1 B:13-23,54-63,67-75,81-88 1rah d1rahb1 B:13-23,54-63,67-75,81-88 1rai d1raid1 D:13-23,54-63,67-75,81-88 1rah d1rahd1 D:13-23,54-63,67-75,81-88 1q95 d1q95l1 L:15-22,53-61,66-75,80-86 1ezz d1ezzb1 B:13-22,55-63,67-79,81-88 1raa d1raab1 B:13-22,54-63,67-75,81-88 1tug d1tugb1 B:13-23,53-63,67-79,81-88 3d7s d3d7sb1 B:16-20,55-63,67-75,81-88 1rac d1racb1 B:13-22,54-63,67-75,81-88 1d09 d1d09d1 D:13-22,52-63,67-79,81-88 9atc d9atcb1 B:15-22,54-62,67-79,81-88 1r0b d1r0bh1 H:13-23,54-62,67-75,81-88 3d7s d3d7sd1 D:15-23,55-62,67-75,81-88 1sku d1skub1 B:14-18,54-63,67-79,82-88 102. d.58.14 Ribosomal protein S6 Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1i96 d1i96f_ F:2-11,56-68,68-83,84-93 1i95 d1i95f_ F:2-11,56-68,68-83,84-93 1i97 d1i97f_ F:1-11,56-68,71-82,84-93 3d5a d3d5af1 F:1-12,56-68,68-83,84-93 3d5c d3d5cf1 F:1-12,56-68,68-83,84-93 2i2u d2i2uf1 F:2-12,55-66,67-82,83-92 2j02 d2j02f1 F:1-11,56-68,68-83,84-93 2j00 d2j00f1 F:1-11,56-68,68-83,84-93 1qjh d1qjha_ A:1-12,56-68,68-83,84-93 2uxd d2uxdf1 F:2-11,56-68,68-83,84-93 1g1x d1g1xf_ F:1-11,57-68,68-83,84-93 2uub d2uubf1 F:1-11,56-68,69-83,84-93 2i2p d2i2pf1 F:2-12,55-66,67-82,83-92 2j5a d2j5aa1 A:7-18,62-74,75-90,91-100 2hhh d2hhhf1 F:1-11,56-68,69-83,84-93 2uuc d2uucf1 F:1-11,56-68,69-83,84-93 1cqm d1cqma_ A:1-12,56-68,68-83,84-93 2hgr d2hgri1 I:1-12,56-68,69-83,84-93 1cqm d1cqmb_ B:1-12,56-68,68-83,84-93 2uua d2uuaf1 F:1-11,56-68,69-83,84-93 2qou d2qouf1 F:2-12,55-66,67-82,83-92 2qow d2qowf1 F:2-12,55-66,67-82,83-92 2qoy d2qoyf1 F:2-12,55-66,67-82,83-92 2qan d2qanf1 F:1-12,55-67,67-82,83-92 2aw7 d2aw7f1 F:1-12,55-67,67-82,83-91 2qp0 d2qp0f1 F:2-12,55-66,67-82,83-92 2uu9 d2uu9f1 F:1-11,56-68,69-83,84-93 1cqn d1cqnb_ B:1-12,56-68,68-83,84-93 1ris d1risa_ A:1-12,56-68,68-83,84-93 1hnx d1hnxf_ F:1-11,56-68,69-83,84-93 1vs7 d1vs7f1 F:1-12,55-67,67-82,83-91 2b9o d2b9of1 F:1-11,56-68,68-83,84-93 2b9m d2b9mf1 F:1-11,56-68,68-83,84-93 2b64 d2b64f1 F:1-11,56-68,68-83,84-93 1i94 d1i94f_ F:1-11,56-68,69-83,84-93 1yl4 d1yl4i1 I:1-12,56-68,68-83,84-93 3df3 d3df3f1 F:1-12,55-67,67-82,83-92 2v46 d2v46f1 F:1-12,56-68,68-83,84-93 2qbb d2qbbf1 F:2-12,55-66,67-82,83-92 2qbf d2qbff1 F:1-11,55-67,67-82,83-92 2qbd d2qbdf1 F:1-11,55-67,67-82,83-92 2qb9 d2qb9f1 F:2-12,55-66,67-82,83-92 2v48 d2v48f1 F:1-12,56-68,68-83,84-93 2qal d2qalf1 F:1-11,55-67,67-82,83-92 3df1 d3df1f1 F:1-12,55-67,67-82,83-92 2qbj d2qbjf1 F:1-12,55-67,67-82,83-92 1xnr d1xnrf_ F:1-12,56-68,68-83,84-93 2qbh d2qbhf1 F:1-12,55-67,67-82,83-92 2vqe d2vqef1 F:1-12,56-68,68-83,84-93 2hgp d2hgpi1 I:1-12,56-68,69-83,84-93 2hgi d2hgii1 I:1-12,56-68,68-83,84-93 1xnq d1xnqf_ F:1-11,56-68,68-83,84-93 2vqf d2vqff1 F:1-12,56-68,68-83,84-93 1j5e d1j5ef_ F:1-11,56-68,68-83,84-93 1lou d1loua_ A:1-11,56-68,68-83,84-93 1hnz d1hnzf_ F:1-11,56-68,68-83,84-93 1vmb d1vmba_ A:6-17,62-74,77-89,90-99 2z4m d2z4mf1 F:1-12,55-67,67-82,83-92 1g1x d1g1xa_ A:1-11,56-68,68-83,84-93 1fjg d1fjgf_ F:1-11,56-68,68-83,84-93 1hnw d1hnwf_ F:1-11,56-68,68-83,84-93 1cqn d1cqna_ A:1-12,56-68,68-82,84-93 2e5l d2e5lf1 F:1-12,56-68,68-83,84-93 1vs5 d1vs5f1 F:2-12,55-66,67-82,83-92 2z4k d2z4kf1 F:1-11,55-67,67-82,83-92 1xmq d1xmqf_ F:1-11,56-68,68-83,84-93 1n36 d1n36f_ F:1-11,56-68,69-83,84-93 1hr0 d1hr0f_ F:1-11,56-68,69-83,84-93 1xmo d1xmof_ F:1-11,56-68,68-83,84-93 2uxc d2uxcf1 F:1-11,56-68,69-83,84-93 2uxb d2uxbf1 F:1-11,56-68,69-83,84-93 2f4v d2f4vf1 F:1-11,56-68,68-82,84-93 2bvz d2bvza1 A:1-11,56-68,69-83,84-93 2vhp d2vhpf1 F:1-12,55-67,67-82,83-92 2avy d2avyf1 F:2-12,55-66,67-82,83-92 2bxj d2bxja1 A:1-11,56-68,68-82,84-93 2vho d2vhof1 F:1-12,55-67,67-82,83-92 1n34 d1n34f_ F:1-11,56-68,69-83,84-93 2bxj d2bxjb1 B:1-11,56-68,68-83,84-93 1n32 d1n32f_ F:1-12,56-68,69-83,84-93 1n33 d1n33f_ F:1-11,56-68,69-83,84-93 2qnh d2qnhg1 G:1-11,56-68,68-83,84-93 103. d.357.1 NosL/MerB-like NosL/MerB-like unusual fold; comprises two structural repeats of beta(2)-alpha-beta motifs, forming separate beta-sheets; probable duplication 2hpu d2hpua1 A:35-42,46-50,51-64,66-76 1s6l d1s6la2 A:140-147,161-167,167-179,183-188 2hq3 d2hq3a1 A:35-42,46-50,51-63,66-76 2hpu d2hpua1 A:97-104,114-118,119-130,130-137 2hq3 d2hq3a1 A:97-104,114-118,119-130,131-137 104. d.58.39 Glutamyl tRNA-reductase catalytic, N-terminal domain common fold is elaborated with additional secondary structures ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1gpj d1gpja3 A:3-11,49-57,58-70,73-78 105. d.58.56 CcmK-like contains extra C-terminal helix; forms compact hexameric 'tiles' of hexagonal shape ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2a10 d2a10c1 C:5-14,42-50,51-69,74-82 2a10 d2a10b1 B:5-14,42-51,51-70,73-81 2a10 d2a10f1 F:5-14,42-51,51-70,73-81 2a10 d2a10d1 D:5-14,42-51,51-70,73-81 2a10 d2a10e1 E:5-14,42-51,51-70,73-81 2ewh d2ewha1 A:7-16,44-52,53-71,74-83 2a18 d2a18a1 A:5-14,42-51,51-70,73-81 2a18 d2a18b1 B:5-14,42-51,51-70,73-81 2a18 d2a18c1 C:5-14,42-51,51-70,73-82 2a10 d2a10a1 A:5-14,42-50,51-70,74-82 2g13 d2g13a1 A:6-16,44-53,53-72,74-83 2a1b d2a1bh1 H:3-12,40-48,49-68,71-80 2a1b d2a1bc1 C:3-12,40-48,49-68,71-80 2a1b d2a1bj1 J:3-12,40-48,49-68,71-80 2a1b d2a1bd1 D:3-12,40-48,49-68,71-80 2a1b d2a1be1 E:3-12,40-48,49-68,71-80 2a1b d2a1bg1 G:3-12,40-48,49-68,71-80 2a1b d2a1bi1 I:3-12,40-48,49-68,71-80 2a1b d2a1bk1 K:3-12,40-48,49-68,71-80 2a1b d2a1bb1 B:3-12,40-48,49-68,71-80 2a1b d2a1ba1 A:3-12,40-48,49-68,71-80 2a1b d2a1bf1 F:3-12,40-48,49-68,71-80 2a1b d2a1bl1 L:3-12,40-48,49-68,71-80 107. d.58.32 FAD-linked oxidases, C-terminal domain duplication: contains two subdomains of this fold ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2vao d2vaob1 B:275-284,350-359,360-379,380-385 2vao d2vaoa1 A:275-284,350-359,360-379,380-385 1f0x d1f0xb1 B:1275-1284,1389-1398,1397-1415,1417-1422 1f0x d1f0xa1 A:275-284,389-398,397-415,417-422 1ahu d1ahub1 B:275-284,350-359,360-379,380-385 1ahu d1ahua1 A:275-284,350-359,360-379,380-385 1e8f d1e8fa1 A:275-284,350-359,360-379,380-385 1e8f d1e8fb1 B:275-284,350-359,360-379,380-385 1vao d1vaob1 B:275-284,350-359,360-379,380-385 1vao d1vaoa1 A:275-284,350-359,360-379,380-385 1ahv d1ahvb1 B:275-284,350-359,360-379,380-386 1ahv d1ahva1 A:275-284,350-359,360-379,380-386 1diq d1diqb1 B:244-253,320-329,330-349,351-356 1diq d1diqa1 A:244-253,320-329,330-349,351-356 1ahz d1ahzb1 B:275-284,350-359,360-379,380-386 1ahz d1ahza1 A:275-284,350-359,360-379,380-386 1e0y d1e0ya1 A:275-284,350-359,360-379,380-385 1qlt d1qltb1 B:275-284,350-359,360-379,380-385 1qlt d1qlta1 A:275-284,350-359,360-379,380-385 1e8h d1e8hb1 B:275-284,350-359,360-379,380-385 1e8h d1e8ha1 A:275-284,350-359,360-379,380-385 1qlu d1qlua1 A:275-284,350-359,360-379,380-385 1e0y d1e0yb1 B:275-284,350-359,360-379,380-385 1e8g d1e8gb1 B:275-284,350-359,360-379,380-385 1w1s d1w1sa1 A:248-257,325-336,344-358,363-370 1wve d1wveb1 B:244-253,320-329,330-349,351-355 1wve d1wvea1 A:244-253,320-329,330-349,351-355 1wvf d1wvfa1 A:243-253,320-330,330-349,351-355 1dzn d1dznb1 B:274-284,350-360,360-379,380-386 1w1q d1w1qa1 A:248-257,325-336,344-358,363-370 1w1r d1w1ra1 A:248-257,325-336,344-358,363-370 1dzn d1dzna1 A:274-284,350-360,360-379,380-386 1w1k d1w1ka1 A:274-284,350-360,360-379,380-385 1w1j d1w1ja1 A:274-284,350-360,360-379,380-385 1w1o d1w1oa1 A:248-257,325-336,344-358,363-370 1w1m d1w1ma1 A:274-284,350-360,360-379,380-385 1w1l d1w1la1 A:274-284,350-360,360-379,380-385 1dii d1diia1 A:244-253,320-329,330-349,351-355 1w1j d1w1jb1 B:274-284,350-360,360-379,380-386 1w1m d1w1mb1 B:274-284,350-360,360-379,380-386 1dii d1diib1 B:244-253,320-329,330-349,351-355 1w1l d1w1lb1 B:274-284,350-360,360-379,380-386 1w1k d1w1kb1 B:274-284,350-360,360-379,380-385 1qlu d1qlub1 B:274-284,350-360,360-379,380-385 1e8g d1e8ga1 A:274-284,350-360,360-379,380-385 1f0x d1f0xb1 B:1451-1463,1492-1503,1506-1522,1522-1526 1f0x d1f0xa1 A:451-463,492-503,506-522,522-526 1f0x d1f0xb1 B:1304-1311,1389-1398,1423-1437,1481-1491 1w1q d1w1qa1 A:394-404,450-461,465-485,487-491 1w1r d1w1ra1 A:394-404,450-461,465-485,487-491 1w1o d1w1oa1 A:394-404,450-461,465-485,487-491 1w1s d1w1sa1 A:394-404,450-461,465-485,487-491 1f0x d1f0xa1 A:304-311,389-398,423-437,481-491 1i19 d1i19a1 A:430-440,510-520,523-543,546-550 2i0k d2i0ka1 A:430-440,510-520,523-542,546-550 1i19 d1i19b1 B:430-440,510-520,523-542,546-550 1i19 d1i19b1 B:308-316,321-329,415-422,472-481 1i19 d1i19a1 A:308-316,321-329,415-422,472-481 2i0k d2i0ka1 A:308-316,321-329,415-422,472-481 109. d.187.1 Photosystem I subunit PsaD Photosystem I subunit PsaD beta-BETA(2)-beta-alpha-beta(2); antiparallel sheet: order 2134 packed against helix and BETA-hairpin on the same side; irregular C-terminal tail 1jb0 d1jb0d_ D:24-35,51-59,60-76,80-87 111. f.10.1 Viral glycoprotein, central and dimerisation domains Viral glycoprotein, central and dimerisation domains 2 intertwined domains; all-beta and alpha+beta 1oan d1oana2 A:53-62,122-130,209-216,219-223 1oan d1oanb2 B:53-62,122-130,209-216,219-223 1tge d1tgec2 C:54-62,122-129,209-216,219-223 2b6b d2b6bc2 C:54-62,122-129,209-216,219-223 1thd d1thda2 A:54-62,122-129,209-216,219-223 1tge d1tgea2 A:54-62,122-129,209-216,219-223 2b6b d2b6bb2 B:54-62,122-129,209-216,219-223 1thd d1thdc2 C:54-62,122-129,209-216,219-223 1tg8 d1tg8a2 A:54-62,122-129,209-216,219-223 1thd d1thdb2 B:54-62,122-129,209-216,219-223 2b6b d2b6ba2 A:54-62,122-129,209-216,219-223 1tge d1tgeb2 B:54-62,122-129,209-216,219-223 1oke d1okeb2 B:53-62,122-130,209-216,219-223 1oke d1okea2 A:53-62,122-130,209-216,219-223 1ok8 d1ok8a2 A:53-62,122-130,209-216,219-223 112. d.16.1 FAD-linked reductases, C-terminal domain N-terminal domain is beta/beta/alpha common fold ! FAD-linked reductases, C-terminal domain alpha+beta sandwich 3cpi d3cpig3 G:306-316,359-368,372-385,387-397 3cpj d3cpjg3 G:306-316,359-368,372-385,387-397 3cph d3cphg3 G:306-316,359-368,372-385,387-397 3cph d3cphh3 H:306-316,359-368,372-385,387-397 1gos d1gosa2 A:293-301,337-346,345-356,381-388 1b37 d1b37c2 C:297-305,343-351,350-361,385-391 1b37 d1b37a2 A:297-305,343-351,350-361,385-391 1b5q d1b5qa2 A:297-305,343-351,350-361,385-391 1b5q d1b5qb2 B:297-305,343-351,350-361,385-391 1h83 d1h83a2 A:297-305,343-351,350-361,385-391 1b37 d1b37b2 B:297-305,343-351,350-361,385-391 1h83 d1h83c2 C:297-305,343-351,350-361,385-391 1h82 d1h82b2 B:297-305,343-351,350-361,385-391 1h82 d1h82c2 C:297-305,343-351,350-361,385-391 1h83 d1h83b2 B:297-305,343-351,350-361,385-391 1ltx d1ltxr2 R:446-458,500-509,517-526,541-554 1h82 d1h82a2 A:297-305,343-351,350-361,385-391 1vg9 d1vg9g2 G:446-458,500-509,517-526,541-554 1h86 d1h86c2 C:297-305,343-351,350-361,385-391 1h84 d1h84a2 A:297-305,343-351,350-361,385-391 1b5q d1b5qc2 C:297-305,343-351,350-361,385-391 1h86 d1h86a2 A:297-305,343-351,350-361,385-391 1h84 d1h84b2 B:297-305,343-351,350-361,385-391 1o5w d1o5wa2 A:302-310,345-355,354-365,389-397 1h84 d1h84c2 C:297-305,343-351,350-361,385-391 1h86 d1h86b2 B:297-305,343-351,350-361,385-391 1h81 d1h81a2 A:297-305,343-351,350-361,385-391 1vg9 d1vg9c2 C:446-458,500-509,517-526,541-554 1o5w d1o5wc2 C:2302-2310,2345-2355,2354-2365,2389-2397 1h81 d1h81b2 B:297-305,343-351,350-361,385-391 1o5w d1o5wb2 B:1302-1310,1345-1355,1354-1365,1389-1397 1o5w d1o5wd2 D:3302-3310,3345-3355,3354-3365,3389-3397 1vg9 d1vg9e2 E:446-458,500-509,517-526,541-554 1vg0 d1vg0a2 A:446-458,500-509,517-526,541-554 1h81 d1h81c2 C:297-305,343-351,350-361,385-391 1vg9 d1vg9a2 A:446-458,500-509,517-526,541-554 1gos d1gosb2 B:293-301,336-346,345-356,380-388 2bcg d2bcgg3 G:306-317,358-368,372-385,387-397 3cpi d3cpih3 H:306-317,358-368,372-385,387-397 1ukv d1ukvg3 G:306-317,358-368,372-385,387-397 2gmh d2gmha2 A:236-248,284-294,302-313,323-336 2gmj d2gmja2 A:236-248,284-294,302-313,323-336 1tdk d1tdka2 A:323-332,366-375,385-402,412-421 1reo d1reoa2 A:323-332,366-375,385-402,412-421 2gmj d2gmjb2 B:236-248,284-294,302-313,323-336 1tdo d1tdoa2 A:323-332,366-375,385-402,412-421 1tdn d1tdna2 A:323-332,366-375,385-402,412-421 2iid d2iidb2 B:323-332,366-375,385-402,412-421 1el5 d1el5a2 A:218-230,261-270,287-303,307-320 2iid d2iidd2 D:323-332,366-375,385-402,412-421 3bhk d3bhka2 A:218-230,261-270,287-303,307-320 2gmh d2gmhb2 B:236-248,284-294,302-313,323-336 1el5 d1el5b2 B:218-230,261-270,287-303,307-320 2iid d2iidc2 C:323-332,366-375,385-402,412-421 3bhk d3bhkb2 B:218-230,261-270,287-303,307-320 1el8 d1el8a2 A:218-230,261-270,287-303,307-320 1f8s d1f8sf2 F:323-332,366-375,385-402,412-421 1l9d d1l9db2 B:218-230,261-270,287-303,307-320 2gb0 d2gb0b2 B:218-230,261-270,287-303,307-320 1l9d d1l9da2 A:218-230,261-270,287-303,307-320 1l9c d1l9ca2 A:218-230,261-270,287-303,307-320 2gf3 d2gf3b2 B:218-230,261-270,287-303,307-320 1f8s d1f8se2 E:323-332,366-375,385-402,412-421 1el8 d1el8b2 B:218-230,261-270,287-303,307-320 1f8s d1f8sg2 G:323-332,366-375,385-402,412-421 2iid d2iida2 A:323-332,366-375,385-402,412-421 2gf3 d2gf3a2 A:218-230,261-270,287-303,307-320 1f8s d1f8sc2 C:323-332,366-375,385-402,412-421 1f8s d1f8sd2 D:323-332,366-375,385-402,412-421 1f8s d1f8sa2 A:323-332,366-375,385-402,412-421 1an9 d1an9a2 A:195-207,234-242,252-268,273-286 1l9c d1l9cb2 B:218-230,261-270,287-303,307-320 1f8s d1f8sh2 H:323-332,366-375,385-402,412-421 1f8r d1f8rc2 C:323-332,366-375,385-402,412-421 1f8s d1f8sb2 B:323-332,366-375,385-402,412-421 1f8r d1f8ra2 A:323-332,366-375,385-402,412-421 1f8r d1f8rd2 D:323-332,366-375,385-402,412-421 1ve9 d1ve9b2 B:195-207,234-241,252-268,273-286 1eli d1elia2 A:218-230,261-270,287-303,307-320 1eli d1elib2 B:218-230,261-270,287-303,307-320 2gb0 d2gb0a2 A:218-230,261-270,287-303,307-320 2a89 d2a89a2 A:218-230,261-270,287-303,307-320 1el7 d1el7a2 A:218-230,261-270,287-303,307-320 1f8r d1f8rb2 B:323-332,366-375,385-402,412-421 2a89 d2a89b2 B:218-230,261-270,287-303,307-320 1el9 d1el9a2 A:218-230,261-270,287-303,307-320 1el9 d1el9b2 B:218-230,261-270,287-303,307-320 1el7 d1el7b2 B:218-230,261-270,287-303,307-320 2z5u d2z5ua3 A:659-666,701-708,719-736,744-750 2ejr d2ejra3 A:659-666,701-708,719-736,744-750 3bhf d3bhfa2 A:218-230,261-270,287-303,307-320 2dw4 d2dw4a3 A:659-666,701-708,711-719,744-750 3bhf d3bhfb2 B:218-230,261-270,287-303,307-320 1an9 d1an9b2 B:195-207,234-242,252-268,273-286 2z3y d2z3ya3 A:659-666,701-708,719-736,744-750 2z5u d2z5ua3 A:659-666,701-708,711-719,744-750 1l9e d1l9eb2 B:218-230,261-270,287-303,307-320 2z3y d2z3ya3 A:659-666,701-708,711-719,744-750 1l9e d1l9ea2 A:218-230,261-270,287-303,307-320 2ejr d2ejra3 A:659-666,701-708,711-719,744-750 1evi d1evia2 A:195-207,234-242,252-268,273-286 2dw4 d2dw4a3 A:659-666,701-708,719-736,744-750 2uxn d2uxna3 A:659-666,701-708,719-736,744-750 2iw5 d2iw5a3 A:659-666,701-708,719-736,743-750 1dao d1daog2 G:195-207,234-242,252-268,273-286 1dao d1daof2 F:195-207,234-242,252-268,273-286 1dao d1daod2 D:195-207,234-242,252-268,273-286 1dao d1daoc2 C:195-207,234-242,252-268,273-286 1dao d1daoe2 E:195-207,234-242,252-268,273-286 1dao d1daoh2 H:195-207,234-242,252-268,273-286 1dao d1daob2 B:195-207,234-242,252-268,273-286 1dao d1daoa2 A:195-207,234-242,252-268,273-286 2uxx d2uxxa3 A:659-666,701-708,719-736,744-750 1kif d1kiff2 F:195-207,234-242,252-268,273-286 1kif d1kife2 E:195-207,234-242,252-268,273-286 1kif d1kifb2 B:195-207,234-242,252-268,273-286 1kif d1kifd2 D:195-207,234-242,252-268,273-286 1kif d1kifc2 C:195-207,234-242,252-268,273-286 1kif d1kifa2 A:195-207,234-242,252-268,273-286 1kif d1kifh2 H:195-207,234-242,252-268,273-286 1kif d1kifg2 G:195-207,234-242,252-268,273-286 2h94 d2h94a3 A:659-666,701-709,719-736,744-750 1ve9 d1ve9a2 A:195-207,234-241,252-268,273-286 2c66 d2c66b2 B:293-301,337-346,356-373,381-388 1ddo d1ddoa2 A:195-207,234-245,252-268,273-286 1ddo d1ddoh2 H:195-207,234-245,252-268,273-286 1ddo d1ddof2 F:195-207,234-241,252-268,273-286 1ddo d1ddob2 B:195-207,234-241,252-268,273-286 1ddo d1ddog2 G:195-207,234-241,252-268,273-286 1ddo d1ddoc2 C:195-207,234-241,252-268,273-286 2c66 d2c66a2 A:293-301,337-346,356-373,381-388 2bk5 d2bk5b2 B:293-301,337-346,356-373,381-388 2c72 d2c72b2 B:293-301,337-346,356-373,381-389 1ddo d1ddoe2 E:195-207,234-242,252-268,273-286 1ddo d1ddod2 D:195-207,234-242,252-268,273-286 1s3b d1s3ba2 A:293-301,337-346,356-373,381-388 2vrm d2vrmb2 B:293-301,337-346,356-373,381-389 1s2y d1s2yb2 B:293-301,337-346,356-373,381-389 2c64 d2c64a2 A:293-301,337-346,356-373,381-388 2iw5 d2iw5a3 A:659-666,701-708,711-719,743-750 2c73 d2c73a2 A:293-301,337-346,356-373,381-388 2c75 d2c75b2 B:293-301,337-346,356-373,381-389 1s2y d1s2ya2 A:293-301,337-346,356-373,381-389 1s3b d1s3bb2 B:293-301,337-346,356-373,381-389 2c70 d2c70b2 B:293-301,337-346,356-373,381-388 2c76 d2c76b2 B:293-301,337-346,356-373,381-389 2c73 d2c73b2 B:293-301,337-346,356-373,381-388 2byb d2bybb2 B:293-301,337-346,356-373,380-389 2c72 d2c72a2 A:293-301,337-346,356-373,381-389 1oja d1ojab2 B:293-301,337-346,356-373,381-389 1tdn d1tdna2 A:323-332,366-375,374-385,412-421 2c67 d2c67b2 B:293-301,337-346,356-373,381-389 2c65 d2c65b2 B:293-301,337-346,356-373,381-389 1ojc d1ojcb2 B:293-301,337-346,356-373,381-388 1ojd d1ojda2 A:293-301,337-346,356-373,381-388 2c75 d2c75a2 A:293-301,337-346,356-373,381-389 1ojc d1ojca2 A:293-301,337-346,356-373,381-388 1s3e d1s3eb2 B:293-301,337-346,356-373,381-388 2c76 d2c76a2 A:293-301,337-346,356-373,381-389 2c64 d2c64b2 B:293-301,337-346,356-373,381-389 1ojd d1ojdh2 H:293-301,337-346,356-373,381-388 1ojd d1ojdi2 I:293-301,337-346,356-373,381-388 2bk5 d2bk5a2 A:293-301,337-346,356-373,381-389 2c70 d2c70a2 A:293-301,337-346,356-373,381-388 2v61 d2v61b2 B:293-301,337-346,356-373,381-389 2vrm d2vrma2 A:293-301,337-346,356-373,381-389 2c65 d2c65a2 A:293-301,337-346,356-373,381-389 2c67 d2c67a2 A:293-301,337-346,356-373,381-389 2byb d2byba2 A:293-301,337-346,356-373,380-388 1ojd d1ojdd2 D:293-301,337-346,356-373,381-388 1ojd d1ojdg2 G:293-301,337-346,356-373,381-388 1ojd d1ojdb2 B:293-301,337-346,356-373,381-388 1oja d1ojaa2 A:293-301,337-346,356-373,381-389 1ojd d1ojdc2 C:293-301,337-346,356-373,381-388 1tdo d1tdoa2 A:323-332,366-375,374-384,412-421 2bk4 d2bk4b2 B:293-301,337-346,356-373,381-388 1ojd d1ojdl2 L:293-301,337-346,356-373,381-388 2bk3 d2bk3b2 B:293-301,337-346,356-373,381-388 1ojd d1ojdf2 F:293-301,337-346,356-373,381-388 1ojd d1ojde2 E:293-301,337-346,356-373,381-388 2bk3 d2bk3a2 A:293-301,337-346,356-373,381-388 1s3e d1s3ea2 A:293-301,337-346,356-373,381-388 2v60 d2v60b2 B:293-301,337-346,356-373,381-389 2bk4 d2bk4a2 A:293-301,337-346,356-373,381-388 2v5z d2v5zb2 B:293-301,337-346,356-373,381-388 2v61 d2v61a2 A:293-301,337-346,356-373,381-389 2v5z d2v5za2 A:293-301,337-346,356-373,381-388 1f8s d1f8sf2 F:323-332,366-375,374-384,412-421 1f8s d1f8sg2 G:323-332,366-375,374-384,412-421 1f8s d1f8sh2 H:323-332,366-375,374-384,412-421 1s2q d1s2qb2 B:293-301,337-346,356-373,381-388 1reo d1reoa2 A:323-332,366-375,374-384,412-421 1oj9 d1oj9a2 A:293-301,337-346,356-373,381-388 1oj9 d1oj9b2 B:293-301,337-346,356-373,381-388 1f8s d1f8sd2 D:323-332,366-375,374-384,412-421 1f8s d1f8sc2 C:323-332,366-375,374-384,412-421 1f8s d1f8sa2 A:323-332,366-375,374-384,412-421 1f8s d1f8sb2 B:323-332,366-375,374-384,412-421 1f8r d1f8rb2 B:323-332,366-375,374-384,412-421 1f8r d1f8rc2 C:323-332,366-375,374-384,412-421 1f8s d1f8se2 E:323-332,366-375,374-384,412-421 2vou d2voub2 B:168-177,216-227,228-239,283-288 1s2q d1s2qa2 A:293-301,337-346,356-373,381-388 1pj5 d1pj5a3 A:220-232,265-272,308-320,326-338 1f8r d1f8ra2 A:323-332,366-375,374-384,412-421 1pj7 d1pj7a3 A:220-232,265-272,308-320,325-338 1f8r d1f8rd2 D:323-332,366-375,374-384,412-421 1ng3 d1ng3a2 A:219-231,253-259,271-287,292-305 2vou d2vouc2 C:168-177,216-227,228-239,283-288 2v60 d2v60a2 A:293-301,337-346,356-373,381-388 2iid d2iidc2 C:323-332,366-375,374-384,412-421 1gos d1gosa2 A:293-301,337-346,356-373,381-388 2vrl d2vrla2 A:293-301,337-346,356-373,381-388 2iid d2iidd2 D:323-332,366-375,374-384,412-421 2iid d2iida2 A:323-332,366-375,374-384,412-421 2iid d2iidb2 B:323-332,366-375,374-384,412-421 2vrl d2vrlb2 B:293-301,337-346,356-373,381-389 1tdk d1tdka2 A:323-332,366-375,374-384,412-421 1pj6 d1pj6a3 A:220-232,265-272,308-320,325-338 1gpe d1gpea2 A:332-343,424-432,461-481,487-493 1gpe d1gpeb2 B:332-343,424-432,461-481,487-493 2vou d2voua2 A:168-177,215-227,228-239,283-288 1o5w d1o5wa2 A:302-310,345-355,365-382,389-397 1o5w d1o5wc2 C:2302-2310,2345-2355,2365-2382,2389-2397 1o5w d1o5wd2 D:3302-3310,3345-3355,3365-3382,3389-3397 1ng4 d1ng4b2 B:219-231,253-264,271-287,292-305 1o5w d1o5wb2 B:1302-1310,1345-1355,1365-1382,1389-1397 1gos d1gosb2 B:293-301,336-346,356-373,380-388 1ryi d1ryic2 C:219-231,253-264,271-287,292-305 1ryi d1ryid2 D:219-231,253-264,271-287,292-305 1ng3 d1ng3b2 B:219-231,253-264,271-287,292-305 1ng4 d1ng4a2 A:219-231,253-264,271-287,292-305 1evi d1evib2 B:194-207,234-242,252-268,273-287 1ryi d1ryia2 A:219-231,253-264,271-287,292-305 2vou d2vouc2 C:168-177,216-227,270-280,283-288 2vou d2voub2 B:168-177,216-227,270-280,283-288 1ryi d1ryib2 B:219-231,253-264,271-287,292-305 2vou d2voua2 A:168-177,215-227,270-280,283-288 2h94 d2h94a3 A:659-666,701-709,709-718,744-750 2ive d2iveb2 B:309-320,358-369,378-395,401-409 2ive d2ivea2 A:309-320,358-369,378-395,401-409 2ivd d2ivdb2 B:309-320,358-369,378-395,401-409 2ivd d2ivda2 A:309-320,358-369,378-395,401-409 1c0i d1c0ia2 A:1193-1206,1230-1241,1248-1264,1276-1289 1c0k d1c0ka2 A:1193-1206,1230-1241,1248-1264,1276-1289 1c0l d1c0la2 A:1193-1206,1230-1241,1248-1264,1276-1289 1lv0 d1lv0a2 A:290-305,348-357,366-374,376-390 1gpe d1gpea2 A:332-343,424-432,461-481,515-519 1gpe d1gpeb2 B:332-343,424-432,461-481,515-519 1c0p d1c0pa2 A:1193-1206,1230-1241,1248-1264,1276-1289 1d5t d1d5ta2 A:290-305,348-357,366-374,376-390 1gal d1gala2 A:329-339,420-428,457-477,483-489 1cf3 d1cf3a2 A:329-339,420-428,457-477,483-489 3c96 d3c96a2 A:186-197,230-241,275-283,283-291 2gmh d2gmha2 A:236-248,284-294,313-321,323-336 2gmj d2gmja2 A:236-248,284-294,313-321,323-336 1sez d1sezb2 B:330-343,385-396,405-422,427-441 2vou d2voub2 B:168-177,216-227,255-269,283-288 1sez d1seza2 A:330-343,385-396,405-422,427-441 2gmh d2gmhb2 B:236-248,284-294,313-321,323-336 1gnd d1gnda2 A:290-305,348-357,366-374,376-390 2gmj d2gmjb2 B:236-248,284-294,313-321,323-336 2vou d2vouc2 C:168-177,216-227,255-269,283-288 2vou d2voua2 A:168-177,215-227,255-269,283-288 1h81 d1h81b2 B:297-305,343-351,361-378,385-391 1h81 d1h81a2 A:297-305,343-351,361-378,385-391 1h81 d1h81c2 C:297-305,343-351,361-378,385-391 1h86 d1h86b2 B:297-305,343-351,361-378,385-391 1h86 d1h86c2 C:297-305,343-351,361-378,385-391 1kdg d1kdga2 A:517-527,602-613,638-656,661-665 1naa d1naaa2 A:517-527,602-613,638-656,661-665 1h82 d1h82b2 B:297-305,343-351,361-378,385-391 1h84 d1h84b2 B:297-305,343-351,361-378,385-391 1kdg d1kdgb2 B:517-527,602-613,638-656,661-665 1b37 d1b37c2 C:297-305,343-351,361-378,385-391 1b5q d1b5qc2 C:297-305,343-351,361-378,385-391 1h84 d1h84c2 C:297-305,343-351,361-378,385-391 1h86 d1h86a2 A:297-305,343-351,361-378,385-391 1b37 d1b37b2 B:297-305,343-351,361-378,385-391 1b5q d1b5qb2 B:297-305,343-351,361-378,385-391 1h84 d1h84a2 A:297-305,343-351,361-378,385-391 1h83 d1h83b2 B:297-305,343-351,361-378,385-391 1h82 d1h82a2 A:297-305,343-351,361-378,385-391 1b5q d1b5qa2 A:297-305,343-351,361-378,385-391 1b37 d1b37a2 A:297-305,343-351,361-378,385-391 1h83 d1h83c2 C:297-305,343-351,361-378,385-391 1h83 d1h83a2 A:297-305,343-351,361-378,385-391 1h82 d1h82c2 C:297-305,343-351,361-378,385-391 1naa d1naab2 B:518-527,602-613,638-656,661-665 114. d.240.1 Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain beta-alpha-beta(2)-alpha-beta; antiparallel beta-sheet: order 1423; "reversed" ferredoxin-like topology 1t94 d1t94a1 A:454-463,465-472,483-500,505-515 1unn d1unnd_ D:281-293,295-306,308-325,328-338 2dpj d2dpja1 A:340-348,357-364,379-394,404-412 1unn d1unnc_ C:281-293,295-306,308-325,328-338 2alz d2alza1 A:340-348,357-364,379-394,404-412 2fll d2flla1 A:340-348,357-364,379-394,404-412 2dpi d2dpia1 A:340-348,357-364,379-394,404-412 2flp d2flpa1 A:340-348,357-364,379-394,404-412 1t3n d1t3nb1 B:760-766,778-784,796-811,826-832 3bq0 d3bq0a1 A:282-291,293-302,307-327,330-340 2v9w d2v9wa1 A:282-291,293-302,307-327,329-339 1s97 d1s97c1 C:282-291,293-302,307-327,329-339 2au0 d2au0a1 A:282-291,294-302,307-327,329-339 1s97 d1s97b1 B:282-291,293-302,307-327,329-339 1k1s d1k1sa1 A:282-291,293-302,307-327,330-340 2j6t d2j6ta1 A:282-291,293-302,307-327,329-339 2c22 d2c22a1 A:282-291,293-302,307-327,329-339 2va2 d2va2b1 B:282-291,293-302,307-327,329-339 2asj d2asjb1 B:1282-1291,1293-1302,1307-1327,1329-1339 2uvv d2uvva1 A:282-291,293-302,307-327,329-339 2asj d2asja1 A:282-291,293-302,307-327,329-339 2bqr d2bqra1 A:282-291,293-302,307-327,329-339 2fln d2flna1 A:340-348,357-364,379-394,404-414 1k1q d1k1qa1 A:282-291,293-302,307-327,330-340 1jih d1jiha1 A:441-450,452-461,468-489,494-505 2r8i d2r8ia1 A:282-291,293-302,307-327,329-339 1k1q d1k1qb1 B:282-291,293-302,307-327,330-340 3bq2 d3bq2a1 A:282-291,293-302,307-327,330-340 2uvr d2uvra1 A:282-291,293-302,307-327,329-339 2jeg d2jega1 A:282-291,293-302,307-327,329-339 2jej d2jeja1 A:282-291,293-302,307-327,329-339 2c28 d2c28a1 A:282-291,293-302,307-327,329-339 2r8g d2r8ga1 A:282-291,293-302,307-327,329-339 2bqu d2bqua1 A:282-291,293-302,307-327,329-339 2bq3 d2bq3a1 A:282-291,293-302,307-327,329-339 2j6u d2j6ua1 A:285-294,296-305,310-330,332-342 2j6s d2j6sa1 A:282-291,293-302,307-327,329-339 2jef d2jefa1 A:282-291,293-302,307-327,329-339 2agq d2agqa1 A:282-291,293-302,307-327,329-339 2jei d2jeia1 A:282-291,293-302,307-327,329-339 2va3 d2va3a1 A:282-291,293-302,307-327,329-339 2uvu d2uvua1 A:282-291,293-302,307-327,329-339 2v9w d2v9wb1 B:282-291,293-302,307-327,329-339 2br0 d2br0a1 A:282-291,293-302,307-327,329-339 2r8h d2r8ha1 A:282-291,293-302,307-327,329-339 1rys d1rysa1 A:282-291,293-302,307-327,329-339 3bq1 d3bq1a1 A:282-291,293-302,307-327,330-340 1s10 d1s10a1 A:282-291,293-302,307-327,329-339 1s0o d1s0ob1 B:282-291,293-302,307-327,329-339 1s0m d1s0mb1 B:282-291,293-302,307-327,329-339 1n56 d1n56a1 A:282-291,293-302,307-327,329-339 2asd d2asda1 A:282-291,293-302,307-327,329-339 1s0o d1s0oa1 A:282-291,293-302,307-327,329-339 2atl d2atlb1 B:1282-1291,1293-1302,1307-1327,1329-1341 1s0m d1s0ma1 A:282-291,293-302,307-327,329-339 2ibk d2ibka1 A:282-291,293-302,307-327,329-339 2c2r d2c2ra1 A:282-291,293-302,307-327,329-339 1t94 d1t94b1 B:454-463,465-473,480-500,505-516 2rdj d2rdjb1 B:282-291,293-302,307-327,329-339 2c2d d2c2da1 A:282-291,293-302,307-327,329-339 2va2 d2va2a1 A:282-291,293-302,307-327,329-339 2r8k d2r8kb1 B:441-450,453-461,468-489,494-505 2r8k d2r8ka1 A:441-450,452-461,468-489,495-505 1jih d1jihb1 B:441-450,452-461,465-489,495-505 2c2e d2c2ea1 A:282-291,293-302,307-327,329-339 2asl d2aslb1 B:1282-1291,1293-1302,1307-1327,1329-1341 1s97 d1s97d1 D:282-291,293-302,307-327,329-341 2rdi d2rdia1 A:282-291,293-302,307-327,329-341 2rdj d2rdja1 A:282-291,293-302,307-327,329-341 2asl d2asla1 A:282-291,293-302,307-327,329-341 1s9f d1s9fd1 D:282-291,293-302,307-327,329-341 1s9f d1s9fc1 C:282-291,293-302,307-327,329-341 1s9f d1s9fb1 B:282-291,293-302,307-327,329-341 1s0n d1s0na1 A:282-291,293-302,307-327,329-341 1n56 d1n56b1 B:282-291,293-302,307-327,329-341 2uvw d2uvwa1 A:282-291,293-302,307-327,329-341 1s9f d1s9fa1 A:282-291,293-302,307-327,329-341 1rys d1rysb1 B:282-291,293-302,307-327,329-341 1n48 d1n48a1 A:282-291,293-302,307-327,329-341 1s97 d1s97a1 A:282-291,293-302,307-327,329-341 1jx4 d1jx4a1 A:282-291,293-302,307-327,329-341 2agp d2agpa1 A:282-291,293-302,307-327,329-341 2imw d2imwp1 P:282-291,293-302,307-327,329-341 2au0 d2au0b1 B:1282-1291,1293-1302,1307-1327,1328-1341 1jxl d1jxla1 A:282-291,293-302,307-327,329-341 2asd d2asdb1 B:1282-1291,1293-1302,1307-1327,1329-1341 2atl d2atla1 A:282-291,293-302,307-327,329-341 2agp d2agpb1 B:282-291,293-302,307-327,329-341 1t3n d1t3na1 A:340-348,356-364,375-395,404-412 1ryr d1ryra1 A:282-291,293-302,307-327,329-341 2r8j d2r8jb1 B:441-450,452-461,469-489,495-509 2ago d2agoa1 A:282-291,293-302,307-327,329-341 2r8j d2r8ja1 A:441-450,452-461,468-489,495-509 1zet d1zeta1 A:338-349,357-364,375-395,403-414 115. d.58.16 PAP/Archaeal CCA-adding enzyme, C-terminal domain Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2zh4 d2zh4a3 A:276-285,325-335,384-397,412-416 2dr5 d2dr5a3 A:276-285,325-335,384-397,412-416 2zh6 d2zh6a3 A:276-285,325-335,384-397,412-416 1r89 d1r89a3 A:276-285,325-335,384-397,412-416 1r8b d1r8ba3 A:276-285,325-335,384-397,412-416 2zh9 d2zh9a3 A:276-285,325-335,384-397,412-416 1uet d1ueta3 A:276-285,325-335,384-397,412-416 2zh8 d2zh8a3 A:276-285,325-335,384-397,412-416 1tfw d1tfwd3 D:276-285,325-335,384-397,412-416 2zh5 d2zh5a3 A:276-285,325-335,384-397,412-416 2zh7 d2zh7a3 A:276-285,325-335,384-397,412-416 1r8a d1r8aa3 A:276-285,325-335,384-397,412-416 1tfy d1tfyd3 D:276-285,325-335,384-397,412-416 2zh2 d2zh2a3 A:276-284,325-335,384-397,412-416 1tfw d1tfwa3 A:276-285,325-335,384-397,412-416 2dr8 d2dr8a3 A:276-285,325-335,384-397,412-416 2dr7 d2dr7a3 A:276-285,325-335,384-397,412-416 2zh1 d2zh1a3 A:276-284,325-335,384-397,412-416 2zh3 d2zh3a3 A:276-285,325-335,384-397,412-416 1ueu d1ueua3 A:276-285,325-335,384-397,412-416 1r8c d1r8ca3 A:276-285,325-335,384-397,412-416 1uev d1ueva3 A:276-285,325-335,384-397,412-416 2zhb d2zhba3 A:276-285,325-335,384-397,412-416 2dra d2draa3 A:276-285,325-335,384-397,412-416 1tfw d1tfwc3 C:276-285,325-335,384-397,412-416 1tfw d1tfwb3 B:276-285,325-335,384-397,412-416 2dr9 d2dr9a3 A:276-285,325-335,384-397,412-416 2dvi d2dvia3 A:276-285,325-335,384-397,412-416 1tfy d1tfyc3 C:276-285,325-335,384-397,412-416 1tfy d1tfyb3 B:276-285,325-335,384-397,412-416 1tfy d1tfya3 A:276-285,325-335,384-397,412-416 2drb d2drba3 A:276-285,325-335,384-397,412-416 1sz1 d1sz1a3 A:276-285,325-335,384-397,412-416 2zha d2zhaa3 A:276-285,325-335,384-397,412-416 1sz1 d1sz1b3 B:276-285,325-335,384-397,412-416 1fa0 d1fa0a1 A:359-370,457-471,481-497,504-514 2q66 d2q66a3 A:359-370,457-471,480-495,504-514 1fa0 d1fa0b1 B:359-370,457-471,480-497,504-514 3c66 d3c66b3 B:359-370,457-471,481-493,504-514 2hhp d2hhpa3 A:359-370,457-471,480-497,504-514 3c66 d3c66a3 A:359-370,457-471,480-493,504-514 2o1p d2o1pb3 B:359-370,457-471,480-497,504-514 1f5a d1f5aa1 A:372-382,433-443,455-475,480-490 1q78 d1q78a3 A:372-382,433-443,455-475,480-490 2o1p d2o1pa3 A:359-370,457-471,480-497,504-514 1q79 d1q79a3 A:372-382,433-444,455-475,480-490 116. b.86.1 Hedgehog/intein (Hint) domain duplication: contains two intertwined structural repeats ! Hedgehog/intein (Hint) domain complex fold made of five beta-hairpin units and a b-ribbon arc 1ef0 d1ef0b1 B:44-53,71-77,160-168,420-427 1ef0 d1ef0a1 A:79-87,153-161,160-168,175-180 1um2 d1um2b1 B:362-370,436-444,443-451,458-463 1lws d1lwsa1 A:79-87,153-161,160-168,175-180 1ef0 d1ef0b1 B:79-87,153-161,160-168,175-180 1vde d1vdeb1 B:79-87,153-161,160-168,175-180 1vde d1vdea1 A:79-87,153-161,160-168,175-180 1lwt d1lwta1 A:79-87,153-161,160-168,175-180 1jva d1jvab1 B:362-370,436-444,443-451,458-463 1um2 d1um2a1 A:362-370,436-444,443-451,458-463 1um2 d1um2b1 B:321-336,354-360,443-451,703-710 1dfa d1dfaa1 A:79-87,153-161,160-168,175-180 1ef0 d1ef0a1 A:38-53,71-77,160-168,420-427 1um2 d1um2a1 A:321-336,354-360,443-451,703-710 1vde d1vdea1 A:38-53,71-77,160-168,420-427 1vde d1vdeb1 B:38-53,71-77,160-168,420-428 1gpp d1gppa_ A:38-53,71-77,160-168,420-428 1jva d1jvab1 B:321-336,354-360,443-451,703-710 1mi8 d1mi8a_ A:7-12,13-18,18-25,143-148 1lwt d1lwta1 A:38-53,71-77,160-168,420-427 1dfa d1dfaa1 A:38-53,71-77,160-168,420-427 1dq3 d1dq3a1 A:6-13,14-20,20-32,51-58 1lws d1lwsa1 A:38-53,71-77,160-168,420-427 1gpp d1gppa_ A:79-87,153-161,160-168,175-410 117. d.58.42 N-utilization substance G protein NusG, N-terminal domain Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1m1g d1m1ga3 A:11-20,136-144,146-157,158-163 1m1g d1m1gd3 D:11-20,136-144,146-157,158-163 1npp d1nppb3 B:11-20,136-144,146-156,158-163 1npr d1npra3 A:11-20,136-144,146-157,158-163 1npp d1nppa3 A:11-19,137-144,146-156,158-163 1npp d1nppc3 C:11-19,137-144,146-157,158-163 1npp d1nppd3 D:11-19,137-144,146-156,158-163 1m1h d1m1ha2 A:11-19,137-144,146-156,158-163 1m1g d1m1gb3 B:11-19,137-144,146-156,158-163 1m1g d1m1gc3 C:11-19,137-144,146-156,158-163 118. e.17.1 D-aminoacid aminotransferase-like PLP-dependent enzymes D-aminoacid aminotransferase-like PLP-dependent enzymes 2 domains: (1) alpha+beta: beta3-alpha2-beta2; (2) alpha/beta, a part of its mixed sheet forms barrel: n=6, S=8 1ekp d1ekpb_ B:240-250,252-259,292-303,304-312 1i2k d1i2ka_ A:176-184,185-190,222-229,230-236 1i1l d1i1lb_ B:696-704,705-710,742-749,750-756 1ekv d1ekvb_ B:240-250,252-259,292-303,304-312 1kt8 d1kt8b_ B:740-750,752-759,792-803,804-812 1ekv d1ekva_ A:240-250,252-259,292-303,304-312 1i1l d1i1la_ A:196-204,205-210,242-249,250-256 1ekf d1ekfb_ B:240-250,252-259,292-303,304-312 1et0 d1et0a_ A:196-204,205-210,242-249,250-256 1i1l d1i1lc_ C:1196-1204,1205-1210,1242-1249,1250-1256 1ekf d1ekfa_ A:240-250,252-259,292-303,304-312 1kta d1ktab_ B:740-750,752-759,792-803,804-812 2a1h d2a1hb1 B:240-250,252-259,292-303,304-312 2a1h d2a1ha1 A:240-250,252-259,292-303,304-312 1ekp d1ekpa_ A:240-250,252-259,292-303,304-312 1i2l d1i2la_ A:176-184,185-190,222-229,230-236 1kta d1ktaa_ A:240-250,252-259,292-303,304-312 1iye d1iyeb_ B:196-204,205-210,242-249,250-256 1iyd d1iydc_ C:196-204,205-210,242-249,250-256 1iyd d1iydb_ B:196-204,205-210,242-249,250-256 1iye d1iyea_ A:196-204,205-210,242-249,250-256 2hhf d2hhfb1 B:740-750,752-759,792-803,804-812 1i1k d1i1ka_ A:196-204,205-210,242-249,250-256 1kt8 d1kt8a_ A:240-250,252-259,292-303,304-312 1a3g d1a3gc_ C:196-204,205-210,242-249,250-256 1iyd d1iyda_ A:196-204,205-210,242-249,250-256 1a3g d1a3gb_ B:196-204,205-210,242-249,250-256 1i1k d1i1kb_ B:696-704,705-710,742-749,750-756 2hhf d2hhfa1 A:240-250,252-259,292-303,304-312 1i1m d1i1mb_ B:696-704,705-710,742-749,750-756 1i1k d1i1kc_ C:1196-1204,1205-1210,1242-1249,1250-1256 1i1m d1i1ma_ A:196-204,205-210,242-249,250-256 1iye d1iyec_ C:196-204,205-210,242-249,250-256 1a3g d1a3ga_ A:196-204,205-210,242-249,250-256 1i1m d1i1mc_ C:1196-1204,1205-1210,1242-1249,1250-1256 2daa d2daab_ B:180-188,189-194,226-233,234-240 2dab d2daba_ A:180-188,189-194,226-233,234-240 4daa d4daab_ B:180-188,189-194,226-233,234-240 1g2w d1g2wb_ B:180-188,189-194,226-233,234-240 3daa d3daab_ B:180-188,189-194,226-233,234-240 1g2w d1g2wa_ A:180-188,189-194,226-233,234-240 5daa d5daab_ B:180-188,189-194,226-233,234-240 4daa d4daaa_ A:180-188,189-194,226-233,234-240 1daa d1daaa_ A:180-188,189-194,226-233,234-240 1a0g d1a0ga_ A:180-188,189-194,226-233,234-240 2daa d2daaa_ A:180-188,189-194,226-233,234-240 1daa d1daab_ B:180-188,189-194,226-233,234-240 5daa d5daaa_ A:180-188,189-194,226-233,234-240 1a0g d1a0gb_ B:180-188,189-194,226-233,234-240 2dab d2dabb_ B:180-188,189-194,226-233,234-240 3daa d3daaa_ A:180-188,189-194,226-233,234-240 119. d.58.40 D-ribose-5-phosphate isomerase (RpiA), lid domain Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1uj6 d1uj6a2 A:135-141,174-182,187-199,200-205 1lk7 d1lk7d2 D:135-141,176-184,189-201,202-207 1uj5 d1uj5a2 A:135-141,174-182,187-199,200-205 1uj4 d1uj4a2 A:135-141,174-182,187-199,200-205 1lk5 d1lk5b2 B:135-141,176-184,189-201,202-207 1lk7 d1lk7a2 A:135-141,176-184,189-201,202-207 1lk7 d1lk7b2 B:135-141,176-184,189-201,202-207 1lk5 d1lk5d2 D:135-141,176-184,189-201,202-207 1lk5 d1lk5a2 A:135-141,176-184,189-201,202-207 1o8b d1o8bb2 B:130-136,165-173,178-190,191-196 1ks2 d1ks2b2 B:130-136,165-173,178-190,191-196 1o8b d1o8ba2 A:130-136,165-173,178-190,191-196 1ks2 d1ks2a2 A:130-136,165-173,178-190,191-196 1lkz d1lkza2 A:130-136,165-173,178-190,191-196 1lkz d1lkzb2 B:130-136,165-173,178-190,191-196 1m0s d1m0sb2 B:131-137,166-174,179-191,192-197 1lk5 d1lk5c2 C:135-141,176-184,189-201,202-207 1lk7 d1lk7c2 C:135-141,176-184,189-201,202-207 1m0s d1m0sa2 A:131-137,166-174,179-190,192-197 120. d.310.1 VC0467-like VC0467-like complex fold; contains bifurcated beta-sheet structure folded into pseudo barrel 2do8 d2do8a1 A:82-89,103-108,109-119,124-130 2aj2 d2aj2a1 A:95-102,115-121,121-128,136-142 2gs5 d2gs5a1 A:87-95,112-117,121-129,128-136 2haf d2hafa1 A:97-104,117-123,123-130,138-144 2hrx d2hrxa1 A:87-95,112-117,121-129,128-136 2gzo d2gzoa1 A:6-11,23-32,138-146,147-152 2gzo d2gzoa1 A:83-89,102-108,107-118,124-130 2ew0 d2ew0a1 A:7-13,25-33,133-142,144-149 2haf d2hafa1 A:20-26,37-45,149-160,161-167 2gs5 d2gs5a1 A:16-24,35-43,142-153,154-160 2hrx d2hrxa1 A:17-24,35-43,142-153,154-160 2aj2 d2aj2a1 A:18-24,35-44,148-158,159-165 2ew0 d2ew0a1 A:79-86,99-105,105-115,121-132 121. d.322.1 PHP14-like PHP14-like beta(3)-alpha-beta(2)-alpha-beta; 3 layers, a/b/a; mixed beta-sheet, half-barrel, order: 132456; strands 2 and 5 are antiparallel to the rest 2o8r d2o8ra2 A:160-168,175-182,206-215,222-234 2o8r d2o8rb2 B:160-168,175-182,206-215,222-234 2ozw d2ozwa1 A:18-29,39-47,52-68,69-81 2ai6 d2ai6a1 A:18-29,39-48,52-68,69-81 2nmm d2nmma1 A:17-29,39-48,52-68,69-74 2hw4 d2hw4a1 A:17-29,39-48,52-68,69-74 2ozx d2ozxa1 A:18-30,38-47,52-68,68-82 2nmm d2nmmb1 B:17-29,40-48,52-68,69-84 1xdp d1xdpb2 B:155-164,165-174,198-207,218-230 1xdp d1xdpa2 A:155-164,165-174,198-207,218-230 2nmm d2nmmc1 C:17-28,40-48,52-68,70-84 1xdo d1xdob2 B:155-164,165-174,198-207,218-230 1xdo d1xdoa2 A:155-164,165-174,198-207,218-230 1xdp d1xdpb2 B:155-164,165-174,206-215,218-230 1xdp d1xdpa2 A:155-164,165-174,206-215,218-230 1xdo d1xdoa2 A:155-164,165-174,206-215,218-230 1xdo d1xdob2 B:155-164,165-174,206-215,218-230 2hw4 d2hw4a1 A:17-29,39-48,52-68,74-84 2nmm d2nmma1 A:17-29,39-48,52-68,74-84 123. d.58.52 Sporulation related repeat duplication: one domain contains two repeats of similar sequence and structure ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1uta d1utaa_ A:246-256,283-293,294-308,313-317 124. b.57.1 Herpes virus serine proteinase, assemblin Herpes virus serine proteinase, assemblin core: barrel, closed; n=7, S=8; complex topology 1jq7 d1jq7a_ A:1013-1021,1080-1090,1118-1129,1169-1175 1o6e d1o6eb_ B:6-15,65-75,102-113,151-157 2wpo d2wpob_ B:13-23,80-90,118-129,169-175 2wpo d2wpoc_ C:13-23,80-90,118-129,169-175 1jq7 d1jq7b_ B:1313-1323,1380-1390,1418-1429,1469-1475 1nju d1njua_ A:13-23,80-90,118-129,169-175 1nju d1njuc_ C:1013-1023,1080-1090,1118-1129,1169-1175 1nju d1njud_ D:1313-1323,1380-1390,1418-1429,1469-1475 2wpo d2wpod_ D:13-23,80-90,118-129,169-175 1nkk d1nkkb_ B:313-323,380-390,418-429,469-475 1nju d1njub_ B:313-323,380-390,418-429,469-475 1nkm d1nkmb_ B:313-323,380-390,418-429,469-475 2wpo d2wpoa_ A:13-23,80-90,118-129,169-175 1nkk d1nkkc_ C:1013-1023,1080-1090,1118-1129,1169-1175 1wpo d1wpob_ B:13-23,80-90,118-129,169-175 1njt d1njtc_ C:1013-1023,1080-1090,1118-1129,1169-1175 1njt d1njtb_ B:313-323,380-390,418-429,469-475 1njt d1njtd_ D:1313-1323,1380-1390,1418-1429,1469-1475 1njt d1njta_ A:13-23,80-90,118-129,169-175 1nkm d1nkma_ A:13-23,80-90,118-129,169-175 1ieg d1iega_ A:13-23,80-90,118-129,169-175 1iec d1iecb_ B:313-323,380-390,418-429,469-475 1cmv d1cmvb_ B:13-23,80-90,118-129,169-175 1nkk d1nkka_ A:13-23,80-90,118-129,169-175 1ieg d1iegb_ B:313-323,380-390,418-429,469-475 1nkk d1nkkd_ D:1313-1323,1380-1390,1418-1429,1469-1475 1id4 d1id4b_ B:313-323,380-390,418-429,469-475 1ief d1iefb_ B:313-323,380-390,418-429,469-475 1iec d1ieca_ A:13-23,80-90,118-129,169-175 1id4 d1id4a_ A:13-23,80-90,118-129,169-175 1cmv d1cmva_ A:13-23,80-90,118-129,169-175 1ied d1iedb_ B:313-323,380-390,418-429,469-475 1ief d1iefa_ A:13-23,80-90,118-129,169-175 1wpo d1wpoa_ A:13-23,80-90,118-129,169-175 1ied d1ieda_ A:13-23,80-90,118-129,169-175 1lay d1laya_ A:13-23,80-90,118-129,169-175 1jq6 d1jq6a_ A:13-22,80-90,118-129,171-175 1o6e d1o6ea_ A:6-15,65-75,102-112,153-157 1fl1 d1fl1b_ B:5-14,63-73,100-111,146-152 2pbk d2pbkb1 B:5-14,63-73,100-111,146-152 1fl1 d1fl1a_ A:5-14,63-73,100-111,146-152 2pbk d2pbka1 A:5-14,63-73,100-111,146-152 1vzv d1vzva_ A:12-20,69-78,103-116,153-157 1at3 d1at3a_ A:20-28,78-87,112-125,162-166 1at3 d1at3b_ B:20-30,78-87,112-125,162-166 128. e.73.1 CV3147-like CV3147-like 2 domains; d1: [alpha/beta; 3 layers, a/b/a, mixed beta-sheet of 8 strands, order 12543876, strands 1, 7 and 8 are antiparallel to the rest]; d2: [pseudo beta-barrel of 6 strands, meander] 2o3i d2o3ia1 A:154-161,163-173,182-198,202-212 2o3i d2o3ib1 B:154-161,163-173,182-198,203-212 129. d.129.4 Cell-division protein ZipA, C-terminal domain contains a single copy of this fold ! TBP-like beta-alpha-beta(4)-alpha 1f7w d1f7wa_ A:9-17,81-88,93-113,114-119 1f7x d1f7xa_ A:9-17,81-88,93-113,114-119 1y2g d1y2gb1 B:9-17,80-88,93-113,114-119 1s1j d1s1jb_ B:9-17,80-88,93-113,114-119 1s1s d1s1sa1 A:9-17,81-88,93-113,114-119 1y2f d1y2fa1 A:9-17,80-88,93-113,114-119 1f47 d1f47b_ B:8-17,80-89,93-113,114-119 1f46 d1f46b_ B:8-17,80-89,93-113,114-119 1s1j d1s1ja_ A:8-17,80-89,93-113,114-119 1y2g d1y2ga1 A:8-17,80-89,93-113,114-119 1s1s d1s1sb1 B:8-17,80-89,93-113,114-119 1f46 d1f46a_ A:8-17,80-89,93-113,114-119 131. d.140.1 Ribosomal protein S8 Ribosomal protein S8 consists of 2 different alpha+beta subdomains arranged in a 4-layer structure: b/a/b/a 1n36 d1n36h_ H:108-115,116-120,120-128,129-138 2qnh d2qnhi1 I:108-115,117-121,120-128,129-138 2vqf d2vqfh1 H:108-115,116-120,120-128,129-138 2avy d2avyh1 H:99-106,107-111,111-119,120-129 1vs5 d1vs5h1 H:99-106,107-111,111-119,120-129 2gyb d2gybh1 H:100-106,107-111,111-119,120-128 1n34 d1n34h_ H:108-115,116-120,120-128,129-138 3d5c d3d5ch1 H:108-115,116-121,120-128,129-138 2ow8 d2ow8i1 I:108-115,116-121,120-128,130-138 3d5a d3d5ah1 H:108-115,116-121,120-128,129-138 2f4v d2f4vh1 H:108-115,116-120,120-128,129-138 2uu9 d2uu9h1 H:108-115,116-120,120-128,129-138 2hhh d2hhhh1 H:108-115,116-120,120-128,129-138 2uub d2uubh1 H:108-115,116-120,120-128,129-138 2aw7 d2aw7h1 H:99-106,107-112,111-119,121-129 1s03 d1s03g_ G:99-106,107-111,111-119,120-129 1xnr d1xnrh_ H:108-115,116-120,120-128,131-138 1s03 d1s03h_ H:99-106,107-111,111-119,120-129 2uuc d2uuch1 H:108-115,116-120,120-128,129-138 1vs7 d1vs7h1 H:99-106,107-112,111-119,121-129 2uxd d2uxdh1 H:108-115,116-120,120-128,131-138 2e5l d2e5lh1 H:108-115,116-120,120-128,131-138 1n33 d1n33h_ H:108-115,116-120,120-128,129-138 1xnq d1xnqh_ H:108-115,116-120,120-128,129-138 2i2p d2i2ph1 H:99-106,107-112,111-119,122-129 2j00 d2j00h1 H:108-115,116-121,120-128,129-138 2j02 d2j02h1 H:108-115,116-121,120-128,129-138 1i96 d1i96h_ H:108-114,117-121,120-128,129-138 1xmo d1xmoh_ H:108-115,116-120,120-128,129-138 2v46 d2v46h1 H:108-115,116-121,120-128,129-138 2v48 d2v48h1 H:108-115,116-121,120-128,129-138 1yl4 d1yl4k1 K:108-114,117-121,120-128,130-138 1i97 d1i97h_ H:109-114,117-121,120-128,131-138 2b9o d2b9oh1 H:108-114,117-121,120-128,129-138 2b9m d2b9mh1 H:108-114,117-121,120-128,129-138 2b64 d2b64h1 H:108-114,117-121,120-128,129-138 1i95 d1i95h_ H:108-114,117-121,120-128,129-138 2hgi d2hgik1 K:108-114,117-121,120-128,129-138 2hgp d2hgpk1 K:108-115,117-121,120-128,129-138 2hgr d2hgrk1 K:108-114,117-121,120-128,129-138 1i6u d1i6ub_ B:100-107,108-112,112-120,121-126 1hnw d1hnwh_ H:108-115,116-120,120-128,129-134 1i6u d1i6ua_ A:100-107,108-112,112-120,121-126 2i2u d2i2uh1 H:100-105,108-112,111-119,121-127 132. d.166.1 ADP-ribosylation ADP-ribosylation unusual fold 2jqn d2jqna1 A:2-9,33-38,38-51,55-63 2o0p d2o0pa1 A:2-9,33-38,41-51,56-63 2o0q d2o0qa1 A:2-9,33-38,41-51,56-63 2a5g d2a5gb1 B:3-10,59-64,65-78,81-90 1ltb d1ltb.1 A:4-10,58-64,65-78,81-89 1wfx d1wfxa_ A:93-100,118-123,124-137,138-145 1ltt d1ltt.1 A:4-10,58-64,65-78,81-89 1tii d1tii.1 A:1-8,56-62,63-76,79-88 1lts d1lts.1 A:4-10,58-64,65-78,81-89 1lti d1lti.1 A:4-10,58-64,65-78,81-89 1ltg d1ltg.1 A:4-10,58-64,65-78,81-89 1xtc d1xtc.1 A:3-10,58-64,65-78,81-90 1lt4 d1lt4a_ A:4-10,58-64,65-78,81-89 1htl d1htl.1 A:4-10,58-64,65-78,81-89 1s5f d1s5fa_ A:3-10,58-64,65-78,81-90 1lt3 d1lt3a_ A:4-10,58-64,65-78,81-89 2a5f d2a5fb1 B:3-10,58-64,65-78,81-90 1s5b d1s5ba_ A:3-10,58-64,65-78,81-90 1s5c d1s5ca_ A:3-10,58-64,65-78,81-90 1s5d d1s5da_ A:3-10,58-64,65-78,81-90 1s5e d1s5ea_ A:3-10,58-64,65-78,81-90 1lta d1lta.1 A:3-10,58-64,65-78,81-90 1s5e d1s5eb_ B:3-10,58-64,65-78,81-90 2a5d d2a5db1 B:3-10,58-64,65-78,81-90 1r45 d1r45d_ D:121-131,170-177,178-185,186-196 1r45 d1r45c_ C:121-131,170-177,178-185,186-196 1dtp d1dtpa_ A:15-24,52-57,58-67,77-87 1r45 d1r45b_ B:121-131,170-177,178-185,186-196 1r45 d1r45a_ A:121-131,170-177,178-185,186-196 1r4b d1r4bb_ B:121-131,170-177,178-185,186-196 1dma d1dmab_ B:433-443,468-473,474-482,496-505 1r4b d1r4ba_ A:121-131,170-177,178-185,186-196 1zm3 d1zm3f1 F:433-443,468-473,474-483,496-505 1ikp d1ikpa2 A:433-443,468-473,474-483,496-505 1zm2 d1zm2f1 F:433-443,468-473,474-483,496-505 1xk9 d1xk9a1 A:433-443,468-473,474-483,496-505 1zm9 d1zm9b1 B:433-443,468-473,474-483,496-505 1tox d1toxb2 B:15-25,52-57,58-67,77-87 1zm2 d1zm2b1 B:433-443,468-473,474-483,496-505 1aer d1aerb_ B:433-442,468-473,474-482,497-505 1zm3 d1zm3b1 B:433-443,468-473,474-483,496-505 1mdt d1mdta2 A:15-24,52-57,58-67,78-87 1tox d1toxa2 A:15-25,52-57,58-67,77-87 1f0l d1f0la2 A:15-24,52-57,58-67,78-87 1f0l d1f0lb2 B:15-25,52-57,58-67,77-87 1ddt d1ddta2 A:15-24,52-57,58-67,78-87 2aua d2auaa1 A:4-13,106-111,112-127,130-140 2aua d2auab1 B:4-13,106-111,112-127,130-140 1xdt d1xdtt2 T:15-25,52-57,58-67,77-87 1zm4 d1zm4d1 D:433-443,468-473,474-483,496-505 1sgk d1sgka2 A:15-25,52-57,58-67,77-87 1mdt d1mdtb2 B:15-25,52-57,58-67,77-87 2zit d2zitf1 F:433-442,468-473,474-483,497-505 2zit d2zitb1 B:433-442,468-473,474-483,497-505 1zm9 d1zm9f1 F:433-443,468-473,474-484,496-505 2zit d2zitd1 D:433-442,468-473,474-483,497-505 1dma d1dmaa_ A:433-443,468-473,474-484,496-505 1zm9 d1zm9d1 D:433-442,468-473,474-483,497-505 1aer d1aera_ A:433-443,468-473,474-484,496-505 1ikq d1ikqa2 A:433-443,468-473,474-484,496-505 1zm2 d1zm2d1 D:433-443,468-473,474-484,496-505 1xk9 d1xk9b1 B:433-443,468-473,474-484,496-505 1zm3 d1zm3d1 D:433-443,468-473,474-484,496-505 2paw d2pawa2 A:855-864,894-899,900-909,915-927 1zm4 d1zm4b1 B:433-443,468-473,474-484,496-505 1zm4 d1zm4f1 F:433-443,468-473,474-484,496-505 1pax d1paxa2 A:855-864,894-899,900-909,915-927 2pax d2paxa2 A:855-864,894-899,900-909,915-927 3pax d3paxa2 A:855-864,894-899,900-909,915-927 1efy d1efya2 A:855-864,894-899,900-909,915-927 1uk1 d1uk1b2 B:855-864,894-899,900-909,915-927 1uk1 d1uk1a2 A:855-864,894-899,900-909,915-927 1gs0 d1gs0a2 A:397-406,436-441,442-451,457-469 1gs0 d1gs0b2 B:397-406,436-441,442-451,457-469 1prt d1prta_ A:5-13,50-55,56-78,82-93 2rd6 d2rd6a2 A:194-203,233-238,239-248,254-266 1wok d1wokb2 B:855-864,894-899,900-909,915-927 1wok d1woka2 A:855-864,894-899,900-909,915-927 1prt d1prtg_ G:5-12,50-55,56-78,82-93 1pto d1ptoa_ A:5-12,49-55,56-78,82-93 1pto d1ptog_ G:5-12,49-55,56-78,82-93 134. d.58.48 MTH1187/YkoF-like Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2ibo d2iboc1 C:2-12,41-48,48-68,68-79 1vk8 d1vk8c_ C:3-13,42-49,49-65,69-81 2ibo d2ibob1 B:2-12,41-48,48-68,69-80 1lxj d1lxja_ A:5-15,45-52,52-71,74-83 1sbr d1sbrb_ B:10-20,47-54,54-73,75-85 2ibo d2iboa1 A:2-12,41-48,48-68,69-80 1vk8 d1vk8d_ D:3-13,42-49,49-69,69-81 1vk8 d1vk8a_ A:3-13,42-49,49-69,69-81 1vk8 d1vk8b_ B:3-13,42-49,49-69,69-81 1yqh d1yqhb1 B:4-15,43-50,50-69,70-81 1s7h d1s7hd_ D:114-124,152-159,159-179,180-190 1s7h d1s7hb_ B:114-124,152-159,159-179,180-190 1yqh d1yqha1 A:4-15,43-50,50-69,70-81 1s7h d1s7ha_ A:11-20,47-53,54-73,75-85 1s7h d1s7hc_ C:114-124,152-159,159-179,180-190 1s99 d1s99a_ A:11-20,47-53,54-73,75-85 1s7h d1s7hd_ D:11-20,47-53,54-73,75-85 1s7h d1s7ha_ A:114-124,152-159,159-179,180-190 1sbr d1sbra_ A:113-124,152-160,159-179,180-190 1sbr d1sbra_ A:11-20,47-53,54-73,75-85 1sbr d1sbrb_ B:114-124,152-159,159-179,180-190 1s7h d1s7hb_ B:11-20,47-53,54-73,75-85 2ibo d2ibod1 D:2-11,41-48,48-68,68-79 1s99 d1s99a_ A:114-124,152-159,159-179,180-190 1s7h d1s7hc_ C:11-20,47-53,54-73,75-85 1lxn d1lxnb_ B:1001-1011,1041-1048,1049-1068,1070-1082 1lxn d1lxnd_ D:3001-3011,3041-3048,3049-3068,3070-3082 1lxn d1lxna_ A:1-11,41-48,49-68,70-82 1lxn d1lxnc_ C:2001-2011,2041-2048,2049-2068,2070-2082 135. d.58.30 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK common fold is elaborated with additional secondary structures ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1eq0 d1eq0a_ A:1-10,52-63,65-82,93-102 2f63 d2f63a1 A:1-10,53-63,65-81,93-102 1rb0 d1rb0a_ A:1-10,51-63,65-82,93-102 1ex8 d1ex8a_ A:1-10,52-63,65-81,93-102 1g4c d1g4ca_ A:1-10,52-63,65-82,93-102 1kbr d1kbra_ A:1-10,52-63,65-81,93-102 1im6 d1im6a_ A:1-10,52-63,65-81,93-102 1ru1 d1ru1b_ B:201-210,252-263,265-281,294-302 1q0n d1q0na_ A:1-10,52-63,65-81,93-102 1f9h d1f9ha_ A:1-10,52-63,65-81,93-102 1hq2 d1hq2a_ A:1-10,52-63,65-81,93-102 2f65 d2f65a1 A:1-11,50-63,65-82,91-102 1ru2 d1ru2a_ A:1-10,51-63,65-81,93-102 1rtz d1rtza_ A:1-10,52-63,65-82,93-102 1dy3 d1dy3a_ A:1-10,52-63,65-81,93-102 1hka d1hkaa_ A:1-10,51-63,65-82,94-102 1ru1 d1ru1a_ A:1-10,51-63,65-82,94-102 1cbk d1cbkb_ B:1-11,53-64,66-82,93-102 1cbk d1cbka_ A:1-11,53-64,66-82,93-102 1g4c d1g4cb_ B:201-210,251-263,265-283,293-302 1rao d1raoa_ A:1-10,52-63,65-82,87-102 1eqm d1eqma_ A:1-10,51-63,65-82,87-102 136. b.153.1 PheT/TilS domain contains putative tRNA-binding structural motif ! PheT/TilS domain core: 3 layers; contains beta-sandwich of unusual topology 1b7y d1b7yb6 B:212-220,329-337,365-385,392-396 1b70 d1b70b6 B:209-220,329-339,365-385,392-396 2akw d2akwb4 B:209-220,329-339,365-385,392-396 1eiy d1eiyb6 B:209-220,329-339,365-385,392-396 2aly d2alyb4 B:209-220,329-339,365-385,392-396 1jjc d1jjcb6 B:212-220,329-337,365-385,392-396 1pys d1pysb6 B:212-220,329-337,365-385,392-396 2iy5 d2iy5b4 B:209-222,329-339,365-385,392-396 2amc d2amcb4 B:209-222,329-339,365-385,392-396 1pys d1pysb6 B:212-220,329-337,365-385,386-390 2iy5 d2iy5b4 B:209-222,329-339,365-385,385-390 2amc d2amcb4 B:209-222,329-339,365-385,385-390 1eiy d1eiyb6 B:209-220,329-339,365-385,384-390 137. d.76.1 GYF domain GYF/BRK domain-like beta(2)-alpha-beta(2)-alpha; 2 layers, alpha/beta 1gyf d1gyfa_ A:27-32,40-45,45-56,61-67 1wh2 d1wh2a_ A:19-25,27-34,34-45,52-56 1l2z d1l2za_ A:3-8,16-20,21-32,37-43 1syx d1syxd1 D:27-32,40-45,45-56,61-67 1syx d1syxf1 F:27-32,40-45,45-56,61-67 1syx d1syxb1 B:27-32,40-45,45-56,61-67 139. d.58.12 eEF-1beta-like Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1b64 d1b64a_ A:4-15,50-61,65-77,79-90 1ije d1ijeb_ B:1119-1130,1164-1176,1180-1192,1194-1206 1g7c d1g7cb_ B:1119-1130,1164-1176,1180-1192,1194-1206 1f60 d1f60b_ B:1119-1130,1164-1176,1180-1192,1194-1206 2b7b d2b7bb1 B:1119-1130,1164-1176,1180-1192,1194-1206 1ijf d1ijfb_ B:1119-1130,1164-1176,1180-1192,1194-1206 1gh8 d1gh8a_ A:2-11,47-58,61-74,79-89 2b7c d2b7cb1 B:1119-1130,1164-1176,1180-1192,1194-1206 140. d.58.22 TRADD, N-terminal domain Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1f3v d1f3va_ A:11-22,70-79,79-93,113-121 1f3v d1f3va_ A:11-22,70-79,93-108,113-121 1f2h d1f2ha_ A:12-22,69-78,79-104,113-120 141. d.58.9 RuBisCO, large subunit, small (N-terminal) domain C-terminal domain is beta/alpha barrel ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1rba d1rbaa2 A:22-33,78-87,100-115,117-128 1rld d1rlda2 A:34-45,95-105,112-127,129-141 1rld d1rldb2 B:34-45,95-105,112-127,129-141 2rus d2rusb2 B:22-33,78-87,100-115,117-128 1gk8 d1gk8a2 A:34-45,96-105,112-127,129-140 2v69 d2v69d2 D:34-45,96-105,112-127,129-140 1svd d1svda2 A:27-38,89-98,105-120,122-133 1gk8 d1gk8c2 C:34-45,96-105,112-127,129-140 1uzh d1uzhk2 K:34-45,96-105,112-127,129-140 1uzh d1uzhv2 V:34-45,96-105,112-127,129-140 1uzh d1uzho2 O:34-45,96-105,112-127,129-140 1uzh d1uzhb2 B:34-45,96-105,112-127,129-140 1uzh d1uzhe2 E:34-45,96-105,112-127,129-140 1uzh d1uzhh2 H:34-45,96-105,112-127,129-140 1aa1 d1aa1e2 E:34-45,96-105,112-127,129-140 1aa1 d1aa1h2 H:34-45,96-105,112-127,129-140 1aa1 d1aa1l2 L:34-45,96-105,112-127,129-140 1aa1 d1aa1b2 B:34-45,96-105,112-127,129-140 1ej7 d1ej7l2 L:34-45,96-105,112-127,129-140 1rlc d1rlcl2 L:34-45,95-105,112-127,129-140 1rba d1rbab2 B:22-33,78-87,100-115,117-128 1aus d1ausm2 M:34-45,96-105,112-127,129-140 1aus d1ausl2 L:34-45,96-105,112-127,129-140 1aus d1ausn2 N:34-45,96-105,112-127,129-140 1aus d1auso2 O:34-45,96-105,112-127,129-140 3rub d3rubl2 L:34-45,96-105,112-127,129-140 1rxo d1rxob2 B:34-45,95-105,112-127,129-140 1rxo d1rxoh2 H:34-45,95-105,112-127,129-140 1rxo d1rxol2 L:34-45,95-105,112-127,129-140 1rxo d1rxoe2 E:34-45,95-105,112-127,129-140 1tel d1telb2 B:2020-2032,2090-2102,2108-2118,2129-2137 1rcx d1rcxv2 V:34-45,95-105,112-122,129-141 1rcx d1rcxo2 O:34-45,95-105,112-122,129-141 1rcx d1rcxe2 E:34-45,95-105,112-122,129-141 1bwv d1bwve2 E:34-45,96-105,112-122,129-141 1bwv d1bwva2 A:34-45,96-105,112-122,129-141 1rcx d1rcxl2 L:34-45,95-105,112-122,129-141 1rcx d1rcxk2 K:34-45,95-105,112-122,129-141 1rcx d1rcxb2 B:34-45,95-105,112-122,129-141 1rcx d1rcxh2 H:34-45,95-105,112-122,129-141 1rcx d1rcxr2 R:34-45,95-105,112-122,129-141 1bwv d1bwvc2 C:34-45,96-105,112-122,129-141 1bwv d1bwvg2 G:34-45,96-105,112-122,129-141 8ruc d8ruce2 E:34-45,96-105,112-122,129-141 1iwa d1iwae2 E:34-45,96-105,112-122,129-141 1iwa d1iwak2 K:34-45,96-105,112-122,129-141 1iwa d1iwam2 M:34-45,96-105,112-122,129-141 1tel d1tela2 A:1020-1032,1090-1102,1108-1118,1126-1137 1iwa d1iwac2 C:34-45,96-105,112-122,129-141 1iwa d1iwai2 I:34-45,96-105,112-122,129-141 1iwa d1iwag2 G:34-45,96-105,112-122,129-141 1iwa d1iwaa2 A:34-45,96-105,112-122,129-141 2v6a d2v6ae2 E:34-45,96-105,112-122,129-140 1gk8 d1gk8g2 G:34-45,96-105,112-122,129-140 2v6a d2v6ah2 H:34-45,96-105,112-122,129-140 1gk8 d1gk8e2 E:34-45,96-105,112-122,129-140 2v6a d2v6ad2 D:34-45,96-105,112-122,129-140 9rub d9rubb2 B:22-33,78-87,100-110,117-128 2v69 d2v69g2 G:34-45,96-105,112-122,129-140 2v69 d2v69e2 E:34-45,96-105,112-122,129-140 2v6a d2v6ac2 C:34-45,96-105,112-122,129-140 2v6a d2v6aa2 A:34-45,96-105,112-122,129-140 2v6a d2v6ab2 B:34-45,96-105,112-122,129-140 1rco d1rcoo2 O:34-45,96-105,112-122,129-140 1ykw d1ykwb2 B:20-32,90-102,108-118,126-137 1ykw d1ykwa2 A:20-32,90-102,108-118,126-137 8ruc d8ruca2 A:34-45,96-105,112-122,129-140 1ir2 d1ir2y2 Y:34-45,96-105,112-122,129-140 2v6a d2v6ag2 G:34-45,96-105,112-122,129-140 2v6a d2v6af2 F:34-45,96-105,112-122,129-140 1uw9 d1uw9o2 O:34-45,96-105,112-122,129-140 4rub d4rubb2 B:34-45,96-105,112-122,129-140 1ir2 d1ir2d2 D:34-45,96-105,112-122,129-140 2v69 d2v69a2 A:34-45,96-105,112-122,129-140 2v63 d2v63b2 B:34-45,96-105,112-122,129-140 1ir2 d1ir2f2 F:34-45,96-105,112-122,129-140 1uw9 d1uw9b2 B:34-45,96-105,112-122,129-140 1uw9 d1uw9v2 V:34-45,96-105,112-122,129-140 2v69 d2v69c2 C:34-45,96-105,112-122,129-140 1ir2 d1ir2a2 A:34-45,96-105,112-122,129-140 2v69 d2v69f2 F:34-45,96-105,112-122,129-140 2v63 d2v63e2 E:34-45,96-105,112-122,129-140 2v63 d2v63h2 H:34-45,96-105,112-122,129-140 4rub d4ruba2 A:34-45,96-105,112-122,129-140 1uw9 d1uw9r2 R:34-45,96-105,112-122,129-140 1uzh d1uzha2 A:34-45,96-105,112-122,129-140 2v69 d2v69h2 H:34-45,96-105,112-122,129-140 1wdd d1wdda2 A:34-45,96-105,112-122,129-140 1ir2 d1ir2b2 B:34-45,96-105,112-122,129-140 8ruc d8rucc2 C:34-45,96-105,112-122,129-140 1ir2 d1ir2h2 H:34-45,96-105,112-122,129-140 1uw9 d1uw9a2 A:34-45,96-105,112-122,129-140 1wdd d1wdde2 E:34-45,96-105,112-122,129-140 2v68 d2v68b2 B:34-45,96-105,112-122,129-140 2v63 d2v63a2 A:34-45,96-105,112-122,129-140 1uw9 d1uw9k2 K:34-45,96-105,112-122,129-140 1uw9 d1uw9e2 E:34-45,96-105,112-122,129-140 1ir2 d1ir2z2 Z:34-45,96-105,112-122,129-140 1uzh d1uzhr2 R:34-45,96-105,112-122,129-140 9rub d9ruba2 A:22-33,78-87,100-110,117-128 1uw9 d1uw9h2 H:34-45,96-105,112-122,129-140 1uzd d1uzdv2 V:34-45,96-105,112-122,129-140 1uzd d1uzde2 E:34-45,96-105,112-122,129-140 2v63 d2v63d2 D:34-45,96-105,112-122,129-140 2v67 d2v67h2 H:34-45,96-105,112-122,129-140 1ir2 d1ir2g2 G:34-45,96-105,112-122,129-140 1ir2 d1ir2s2 S:34-45,96-105,112-122,129-140 2v63 d2v63g2 G:34-45,96-105,112-122,129-140 2v63 d2v63f2 F:34-45,96-105,112-122,129-140 2v68 d2v68d2 D:34-45,96-105,112-122,129-140 2v67 d2v67g2 G:34-45,96-105,112-122,129-140 2v69 d2v69b2 B:34-45,96-105,112-122,129-140 2v63 d2v63c2 C:34-45,96-105,112-122,129-140 1ir2 d1ir2c2 C:34-45,96-105,112-122,129-140 1ir2 d1ir2t2 T:34-45,96-105,112-122,129-140 1ir2 d1ir2v2 V:34-45,96-105,112-122,129-140 2v67 d2v67e2 E:34-45,96-105,112-122,129-140 2v67 d2v67b2 B:34-45,96-105,112-122,129-140 2v68 d2v68e2 E:34-45,96-105,112-122,129-140 1ir2 d1ir2e2 E:34-45,96-105,112-122,129-140 4rub d4rubc2 C:34-45,96-105,112-122,129-140 4rub d4rubd2 D:34-45,96-105,112-122,129-140 1rbo d1rbol2 L:34-45,96-105,112-122,129-140 1rbo d1rboh2 H:34-45,96-105,112-122,129-140 1uzd d1uzdh2 H:34-45,96-105,112-122,129-140 1rbo d1rbob2 B:34-45,96-105,112-122,129-140 1rbo d1rboe2 E:34-45,96-105,112-122,129-140 1uzd d1uzdb2 B:34-45,96-105,112-122,129-140 2v67 d2v67f2 F:34-45,96-105,112-122,129-140 1uzd d1uzda2 A:34-45,96-105,112-122,129-140 2v67 d2v67a2 A:34-45,96-105,112-122,129-140 2v68 d2v68a2 A:34-45,96-105,112-122,129-140 1uzd d1uzdk2 K:34-45,96-105,112-122,129-140 2v68 d2v68h2 H:34-45,96-105,112-122,129-140 2v67 d2v67d2 D:34-45,96-105,112-122,129-140 1ir2 d1ir2w2 W:34-45,96-105,112-122,129-140 1uzd d1uzdo2 O:34-45,96-105,112-122,129-140 1uwa d1uwav2 V:34-45,96-105,112-122,129-140 1uwa d1uwaa2 A:34-45,96-105,112-122,129-140 2v68 d2v68g2 G:34-45,96-105,112-122,129-140 1uzd d1uzdr2 R:34-45,96-105,112-122,129-140 2v67 d2v67c2 C:34-45,96-105,112-122,129-140 1uwa d1uwar2 R:34-45,96-105,112-122,129-140 1uwa d1uwao2 O:34-45,96-105,112-122,129-140 1ir1 d1ir1a2 A:34-45,96-105,112-122,129-140 1rco d1rcok2 K:34-45,95-105,112-122,129-140 1rco d1rcov2 V:34-45,95-105,112-122,129-140 1rco d1rcob2 B:34-45,95-105,112-122,129-140 1rco d1rcoh2 H:34-45,95-105,112-122,129-140 1rco d1rcol2 L:34-45,95-105,112-122,129-140 1rco d1rcor2 R:34-45,95-105,112-122,129-140 1rco d1rcoe2 E:34-45,95-105,112-122,129-140 1uwa d1uwak2 K:34-45,96-105,112-122,129-140 1uwa d1uwab2 B:34-45,96-105,112-122,129-140 1uwa d1uwae2 E:34-45,96-105,112-122,129-140 1ir2 d1ir2u2 U:34-45,95-105,112-122,129-140 2v68 d2v68c2 C:34-45,96-105,112-122,129-140 2v68 d2v68f2 F:34-45,96-105,112-122,129-140 1ir1 d1ir1b2 B:34-45,96-105,112-122,129-140 1uwa d1uwah2 H:34-45,96-105,112-122,129-140 1rbl d1rblf2 F:34-45,96-105,112-122,129-140 1rbl d1rblb2 B:34-45,96-105,112-122,129-140 1rbl d1rbla2 A:34-45,96-105,112-122,129-140 1rbl d1rblh2 H:34-45,96-105,112-122,129-140 1rbl d1rbld2 D:34-45,96-105,112-122,129-140 1rbl d1rble2 E:34-45,96-105,112-122,129-140 1rbl d1rblg2 G:34-45,96-105,112-122,129-140 1rbl d1rblc2 C:34-45,96-105,112-122,129-140 1ir1 d1ir1d2 D:34-45,96-105,112-122,129-140 1rsc d1rscg2 G:34-45,96-105,112-122,129-140 1rsc d1rscc2 C:34-45,96-105,112-122,129-140 1rsc d1rscd2 D:34-45,96-105,112-122,129-140 1rsc d1rscb2 B:34-45,96-105,112-122,129-140 1rsc d1rsca2 A:34-45,96-105,112-122,129-140 1rsc d1rscf2 F:34-45,96-105,112-122,129-140 1rsc d1rsch2 H:34-45,96-105,112-122,129-140 8ruc d8rucg2 G:34-45,95-105,112-122,129-140 1ir1 d1ir1c2 C:34-45,96-105,112-122,129-140 1rsc d1rsce2 E:34-45,96-105,112-122,129-140 1ir2 d1ir2x2 X:34-45,95-105,112-122,129-140 5rub d5rubb2 B:22-33,78-87,100-110,117-128 1bxn d1bxng2 G:37-48,99-108,115-125,132-143 1iwa d1iwao2 O:34-45,96-105,112-122,129-140 1bxn d1bxna2 A:37-48,99-108,115-125,132-143 1bxn d1bxne2 E:37-48,99-108,115-125,132-143 1bxn d1bxnc2 C:37-48,99-108,115-125,132-143 5rub d5ruba2 A:22-33,78-87,100-110,117-128 2rus d2rusa2 A:22-33,78-87,100-110,117-128 1rus d1rusb2 B:22-33,78-87,100-110,117-128 1rus d1rusa2 A:22-33,78-87,100-110,117-128 2cxe d2cxec2 C:25-35,80-89,97-107,114-126 2cxe d2cxeb2 B:25-35,80-89,97-107,114-126 2cxe d2cxed2 D:25-35,80-89,97-107,114-126 2cxe d2cxea2 A:25-35,80-89,97-107,114-126 1geh d1gehd2 D:23-34,83-93,100-110,117-128 1geh d1gehc2 C:23-34,83-93,100-110,117-128 2d69 d2d69b2 B:25-35,80-89,97-107,114-126 1geh d1gehe2 E:23-34,83-93,100-110,117-128 1geh d1geha2 A:23-34,83-93,100-110,117-128 1geh d1gehb2 B:23-34,83-93,100-110,117-128 2d69 d2d69d2 D:25-35,80-89,97-107,114-126 2d69 d2d69e2 E:25-35,80-89,97-107,114-126 2d69 d2d69a2 A:25-35,80-89,97-107,114-126 2cwx d2cwxa2 A:25-35,80-89,97-107,114-126 2cwx d2cwxe2 E:25-35,80-89,97-107,114-126 143. d.100.1 L9 N-domain-like MbtH/L9 domain-like beta(2)-alpha-beta-alpha; 3 layers: alpha/beta/alpha 2hba d2hbab1 B:1-7,15-21,22-34,35-39 2hgq d2hgqk2 K:1-7,16-21,22-34,35-39 2j03 d2j03i2 I:1-6,15-21,22-34,35-39 2j01 d2j01i2 I:1-6,15-21,22-34,35-39 2hvf d2hvfa1 A:1-7,15-21,22-30,35-39 2hbb d2hbba1 A:1-7,15-21,22-30,35-39 2hba d2hbaa1 A:1-7,15-21,22-34,35-39 3df2 d3df2h2 H:1-7,15-21,25-34,35-39 3df4 d3df4h2 H:1-7,15-21,25-34,35-39 2hgu d2hguk2 K:1-6,17-21,22-34,35-39 2qoz d2qozh2 H:1-7,15-20,22-34,35-39 2qp1 d2qp1h2 H:1-7,15-20,22-34,35-39 1qhk d1qhka_ A:7-12,17-22,22-31,37-42 2i2t d2i2th2 H:1-7,15-21,22-29,35-39 2i2v d2i2vh2 H:1-7,15-21,22-29,35-39 2qba d2qbah2 H:1-7,15-20,22-34,35-39 2qov d2qovh2 H:1-7,15-20,22-34,35-39 2qox d2qoxh2 H:1-7,15-20,22-34,35-39 2qao d2qaoh2 H:1-7,15-20,22-29,35-39 2qam d2qamh2 H:1-7,15-20,22-29,35-39 2z4l d2z4lh2 H:1-7,15-20,22-29,35-39 2z4n d2z4nh2 H:1-7,15-20,22-29,35-39 2b9p d2b9pi2 I:1-6,17-21,22-34,35-39 2b9n d2b9ni2 I:1-6,17-21,22-34,35-39 2b66 d2b66i2 I:1-6,17-21,22-34,35-39 2gya d2gyaf2 F:1-6,17-21,22-34,35-39 2gyc d2gycf2 F:1-6,17-21,22-34,35-39 1div d1diva2 A:1-6,17-21,22-29,35-39 2qbi d2qbih2 H:1-7,14-20,22-29,35-39 2qbk d2qbkh2 H:1-7,14-20,22-29,35-39 2qbc d2qbch2 H:2-7,15-19,22-34,35-39 144. d.330.1 ERH-like ERH-like beta(2)-alpha(2)-beta(2)-alpha; antiparallel beta-sheet, order:2134; helices are arranged in a bundle rather than packed agains beta-sheet; dimerises via with the formation of a flattened beta-barel: closed n=8, S=10 2nml d2nmla1 A:3-10,16-23,24-45,64-75 1wwq d1wwqa1 A:10-17,24-30,31-48,72-82 1wz7 d1wz7b1 B:2-10,16-24,24-45,64-74 1w9g d1w9ga1 A:2-10,16-24,24-45,64-74 1wz7 d1wz7c1 C:2-10,16-24,24-44,64-75 1wz7 d1wz7a1 A:2-10,16-24,24-45,64-74 1wz7 d1wz7c1 C:2-10,16-24,53-65,64-75 1w9g d1w9gb1 B:2-10,16-24,24-45,64-75 1wz7 d1wz7a1 A:2-10,16-24,53-65,64-74 1w9g d1w9ga1 A:2-10,16-24,53-65,64-74 2nml d2nmla1 A:3-10,16-23,53-65,64-75 1wz7 d1wz7b1 B:2-10,16-24,53-65,64-74 1wwq d1wwqa1 A:10-17,24-30,60-72,72-82 1w9g d1w9gb1 B:2-10,16-24,53-65,64-75 147. d.58.34 Formiminotransferase domain of formiminotransferase-cyclodeaminase. duplication: contains two subdomains of this fold ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1qd1 d1qd1b2 B:2182-2190,2229-2239,2245-2261,2263-2270 1qd1 d1qd1a2 A:182-190,229-239,245-261,263-270 1qd1 d1qd1a1 A:3-13,45-54,54-74,87-98 1qd1 d1qd1b1 B:2003-2013,2045-2054,2054-2074,2087-2098 148. d.58.54 YbeD/HP0495-like Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2joq d2joqa1 A:15-26,57-68,68-83,84-90 1rwu d1rwua_ A:10-23,54-66,66-80,83-87 149. d.355.1 RplX-like similar structural motif to the Ribosomal S24e family (scop_fa 117786); possible structural permutation RplX-like beta(2)-alpha-beta-alpha; 3 layers, a/b/a; antiparallel beta-sheet, order: 213; some structural similarity to the PurS subunit/repeat (scop_cf 109622) 2jxt d2jxta1 A:5-17,18-30,31-48,53-62 151. g.68.1 Kazal-type serine protease inhibitors conserved core consists of a helix and a loop crosslinked with two disulfides ! Kazal-type serine protease inhibitors 1an1 d1an1i_ I:11-16,18-23,23-31,33-38 1iw4 d1iw4a_ A:21-27,28-34,35-43,47-52 1m8c d1m8ca_ A:21-26,28-33,33-45,49-55 1m8b d1m8ba_ A:21-26,28-33,33-45,49-54 1cho d1choi_ I:21-26,28-33,33-45,49-54 2bus d2busa_ A:22-27,29-34,34-46,50-55 3sgq d3sgqi_ I:21-26,28-33,33-45,49-54 1hja d1hjai_ I:21-26,28-33,33-45,49-54 1yu6 d1yu6d1 D:21-26,28-33,33-45,49-54 2sgd d2sgdi_ I:21-26,28-33,33-45,49-54 1ovo d1ovoc_ C:21-26,28-33,33-45,49-54 1tbq d1tbqs2 S:66-71,73-78,78-91,94-100 2gkr d2gkri1 I:21-26,28-33,33-45,49-54 2nu0 d2nu0i1 I:21-26,28-33,33-45,49-54 1sgr d1sgri_ I:21-26,28-33,33-45,49-54 1sgq d1sgqi_ I:21-26,28-33,33-45,49-54 1tbr d1tbrs2 S:66-71,73-78,78-91,94-99 1sgn d1sgni_ I:21-26,28-33,33-45,49-54 1ppf d1ppfi_ I:21-26,28-33,33-45,49-54 1sgy d1sgyi_ I:21-26,28-33,33-45,49-55 2sgf d2sgfi_ I:21-26,28-33,33-45,49-54 1yu6 d1yu6c1 C:21-26,28-33,33-45,49-54 1ovo d1ovod_ D:21-26,28-33,33-45,49-54 1iy5 d1iy5a_ A:21-26,28-33,33-45,49-55 1ovo d1ovob_ B:21-26,28-33,33-45,49-54 4ovo d4ovoa_ A:21-26,28-33,33-45,49-54 1r0r d1r0ri_ I:21-26,28-33,33-45,49-54 1sge d1sgei_ I:21-26,28-33,33-45,49-54 2sgp d2sgpi_ I:21-26,28-33,33-45,49-54 1ds2 d1ds2i_ I:21-26,28-33,33-45,49-54 1sgp d1sgpi_ I:21-26,28-33,33-45,49-54 2sgq d2sgqi_ I:21-26,28-33,33-45,49-55 2nu1 d2nu1i1 I:21-26,28-33,33-45,49-54 1cso d1csoi_ I:21-26,28-33,33-45,49-54 2nu2 d2nu2i1 I:21-26,28-33,33-45,49-54 2nu4 d2nu4i1 I:21-26,28-33,33-45,49-54 1tbr d1tbrr2 R:66-71,73-78,78-91,94-99 2nu3 d2nu3i1 I:21-26,28-33,33-45,49-54 1ct2 d1ct2i_ I:21-26,28-33,33-45,49-54 1ct4 d1ct4i_ I:21-26,28-33,33-45,49-54 2sge d2sgei_ I:21-26,28-33,33-45,49-54 1ct0 d1ct0i_ I:21-26,28-33,33-45,49-54 1ovo d1ovoa_ A:21-26,28-33,33-45,49-54 1sgd d1sgdi_ I:21-26,28-33,33-45,49-54 3ovo d3ovoa_ A:21-26,28-33,33-45,49-54 1ds3 d1ds3i_ I:21-26,28-33,33-45,49-54 2ovo d2ovoa_ A:21-26,28-33,33-45,49-54 2erw d2erwa1 A:13-18,20-25,25-38,41-47 3sgb d3sgbi_ I:21-26,28-33,33-45,49-55 1tbq d1tbqr2 R:66-71,73-78,78-91,94-99 1lr7 d1lr7a2 A:100-105,107-112,112-125,128-133 1lr8 d1lr8a2 A:100-105,107-112,112-125,128-133 1lr9 d1lr9a2 A:100-105,107-112,112-125,128-133 1tur d1tura_ A:21-26,28-33,33-45,49-54 1tbr d1tbrr1 R:13-18,20-25,25-36,41-46 1cgj d1cgji_ I:21-26,28-33,33-45,49-54 2f3c d2f3ci1 I:13-19,20-25,25-38,40-46 1tus d1tusa_ A:21-26,28-33,33-45,49-54 1bmo d1bmob3 B:92-97,99-104,104-116,125-130 1bmo d1bmoa3 A:92-97,99-104,104-116,125-130 1nub d1nubb3 B:92-97,99-104,104-116,125-130 1nub d1nuba3 A:92-97,99-104,104-116,125-130 1pce d1pcea_ A:25-30,32-37,37-49,53-58 1iy6 d1iy6a_ A:21-26,28-33,33-45,48-54 1tbq d1tbqs1 S:13-19,20-25,25-36,40-46 1cgi d1cgii_ I:21-27,28-33,33-45,48-54 1tgs d1tgsi_ I:21-26,28-33,33-45,49-54 1tbq d1tbqr1 R:13-18,20-25,25-36,41-46 1hpt d1hpta_ A:21-27,28-33,33-45,48-54 1tbr d1tbrs1 S:13-18,20-25,25-38,40-46 1z7k d1z7kb1 B:28-33,35-40,40-52,56-61 1bus d1busa_ A:21-27,29-34,34-46,50-54 152. e.10.1 Prokaryotic type I DNA topoisomerase duplication: the protein chain passing through the domains 2-4 makes two structural repeats ! The active site is formed by the toprim and "winged helix" domains (domains 1 and 4); these two domains are also found in the type II topoisomerase (DNA gyrase A) and in the alpha subunit of topoisomerase IV ! Prokaryotic type I DNA topoisomerase 4 domains: (1) Toprim alpha/beta; (2&4) "winged helix"-like; (3) barrel: n=6, S=8 1cyy d1cyya_ A:218-229,231-242,250-264,457-470 1cy0 d1cy0a_ A:216-229,231-242,250-264,460-472 1ecl d1ecla_ A:216-229,231-242,250-264,460-472 1cy4 d1cy4a_ A:216-229,231-242,250-264,460-472 1cy2 d1cy2a_ A:216-229,231-242,250-264,460-472 1cy7 d1cy7a_ A:216-229,231-242,250-264,460-472 1mw9 d1mw9x_ X:216-229,231-242,250-264,460-472 1cy9 d1cy9a_ A:216-229,231-242,250-264,460-472 1cy9 d1cy9b_ B:216-229,231-242,250-264,460-472 1cy8 d1cy8a_ A:216-229,231-242,250-264,457-472 1mw8 d1mw8x_ X:216-229,231-242,250-264,457-472 1cy1 d1cy1a_ A:216-229,231-242,250-264,457-472 1i7d d1i7da_ A:219-231,233-241,258-271,471-485 1cy6 d1cy6a_ A:216-229,231-242,250-264,457-472 1d6m d1d6ma_ A:218-231,233-241,258-270,474-486 1cyy d1cyyb_ B:220-229,231-242,250-264,460-472 154. b.100.1 Sortase Sortase barrel, closed; n=8, S=10; mixed sheet; two overside connections 1ija d1ijaa_ A:14-22,23-30,70-79,81-89 1t2p d1t2pc_ C:72-80,81-88,128-137,138-147 1t2o d1t2oc_ C:72-80,81-88,128-137,138-147 1t2p d1t2pa_ A:72-80,81-91,128-137,138-147 1t2o d1t2oa_ A:72-80,81-91,128-137,138-147 1t2w d1t2wa_ A:72-80,81-91,128-137,138-147 1t2w d1t2wc_ C:72-80,81-91,128-137,138-147 1t2w d1t2wb_ B:72-80,81-91,130-137,138-147 1t2p d1t2pb_ B:72-80,81-91,130-137,138-147 1t2o d1t2ob_ B:72-80,81-91,130-137,138-147 155. d.58.13 Anticodon-binding domain of PheRS Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1pys d1pysb4 B:692-703,739-750,757-776,777-783 1jjc d1jjcb4 B:692-703,739-750,757-776,777-784 2aly d2alyb5 B:692-703,739-750,757-776,777-783 2amc d2amcb5 B:692-703,739-750,757-776,777-781 2akw d2akwb5 B:692-703,739-750,757-776,777-781 156. d.356.1 SP0830-like SP0830-like duplication: two beta-alpha-beta(2)-alpha-beta-alpha motifs are organized in ferredoxin-like subdomains swapped with the extra C-terminal helices 2hiy d2hiyd1 D:98-106,133-140,148-157,162-167 2hiy d2hiyc1 C:98-106,133-140,148-157,162-167 2hiy d2hiya1 A:98-106,133-140,148-157,162-167 2hiy d2hiyb1 B:98-105,133-140,148-157,163-167 2hiy d2hiyc1 C:1-8,43-50,52-69,74-78 2hiy d2hiya1 A:1-8,43-50,52-69,74-78 2hiy d2hiyd1 D:1-8,43-50,52-69,74-78 2hiy d2hiyb1 B:1-8,43-50,52-69,74-78 159. e.66.1 Api92-like Api92-like 2 domains; d1: [alpha+beta with similarity to ferredoxin-like fold]; d2: [6 helices, bundle, one buried central helix], inserted into d1 2ijr d2ijra1 A:3-13,220-230,234-246,247-257 161. d.58.47 Hypothetical protein VC0424 Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1nxi d1nxia_ A:38-47,77-91,93-112,113-121 162. e.39.1 YebC-like YebC-like 3 domains: (1) 3-helical bundle; (2 and 3 ) alpha+beta of different folds: domain 3 has a ferredoxin-like fold and is inserted in domain 2 1lfp d1lfpa_ A:82-92,94-104,105-121,121-125 1lfp d1lfpa_ A:133-144,169-176,176-191,194-204 1mw7 d1mw7a_ A:78-88,90-100,101-117,118-122 1kon d1kona_ A:133-144,168-176,175-190,194-203 1mw7 d1mw7a_ A:130-140,171-179,178-193,196-206 163. d.375.1 NE1680-like NE1680-like beta(2)-alpha-beta-alpha-beta; 2 layers, a/b; antiparallel sheet, order 3124 2hfq d2hfqa1 A:1-12,16-25,28-44,54-63 164. b.85.6 MoeA C-terminal domain-like beta-clip double-stranded ribbon sharply bent in two places; the ribbon ends form incomplete barrel; jelly-roll 1wu2 d1wu2b1 B:342-352,353-358,365-372,373-380 1xi8 d1xi8a1 A:342-352,353-358,365-372,373-380 1wu2 d1wu2a1 A:342-352,353-358,365-372,373-380 2nqm d2nqmb1 B:344-357,359-366,373-380,381-389 1xi8 d1xi8b1 B:341-352,353-358,365-372,373-381 2nrs d2nrsa1 A:344-357,359-366,373-380,381-389 1fc5 d1fc5b1 B:344-357,359-366,373-380,381-389 2nqs d2nqsa1 A:344-357,359-366,373-380,381-389 2nqq d2nqqa1 A:344-357,359-366,373-380,381-389 1g8l d1g8lb1 B:344-357,359-366,373-380,381-389 2nqn d2nqna1 A:344-357,359-366,373-380,381-389 2nqn d2nqnb1 B:344-357,359-366,373-380,381-389 2nro d2nrob1 B:344-357,359-366,373-380,381-389 1fc5 d1fc5a1 A:344-357,359-366,373-380,381-389 2nqr d2nqra1 A:344-357,359-366,373-380,381-389 2nqk d2nqka1 A:344-357,359-366,373-380,381-389 1g8r d1g8ra1 A:344-357,359-366,373-380,381-389 2nqm d2nqma1 A:343-357,359-366,373-380,381-389 2nqq d2nqqc1 C:344-356,360-366,373-380,381-389 2nqq d2nqqd1 D:344-357,359-366,373-380,381-389 1g8r d1g8rb1 B:344-357,359-366,373-380,381-389 2nqq d2nqqb1 B:344-357,359-366,373-380,381-389 2nqv d2nqva1 A:344-357,359-366,373-380,381-389 2nqv d2nqvb1 B:344-357,359-366,373-380,381-389 1g8l d1g8la1 A:344-357,359-366,373-380,381-389 2nrp d2nrpa1 A:343-357,359-366,373-380,381-389 2nqs d2nqsb1 B:344-357,359-366,373-380,381-389 2nqu d2nqua1 A:343-357,359-366,373-380,381-389 2nqu d2nqub1 B:343-357,359-366,373-380,381-389 2nqr d2nqrb1 B:343-357,359-366,373-380,381-389 2nrs d2nrsb1 B:343-357,359-366,373-380,381-389 1uz5 d1uz5a1 A:346-356,357-362,367-375,376-383 2nqk d2nqkb1 B:343-357,359-366,373-380,381-389 2nro d2nroa1 A:343-357,359-366,373-380,381-389 167. e.74.1 HI0933 insert domain-like HI0933 insert domain-like 2 domains; d1: barrel, closed, n=6, S=12, greek-key; d2: four-helical bundle, inserted in d1 2gqf d2gqfa2 A:217-223,225-229,241-252,256-261 2i0z d2i0za2 A:216-223,229-234,252-264,267-274 171. e.29.1 beta and beta-prime subunits of DNA dependent RNA-polymerase The catalytic site is formed by the association of two double-psi beta-barrel domains, one from each subunit ! beta and beta-prime subunits of DNA dependent RNA-polymerase Multidomain subunits of complex domain organization 3dxj d3dxjn1 N:132-137,150-154,154-164,452-456 3dxj d3dxjd1 D:132-138,150-154,154-164,452-456 1i6v d1i6vd_ D:1378-1382,1390-1395,1395-1409,1416-1420 2nvy d2nvya1 A:1114-1119,1296-1310,1312-1319,1326-1330 1twf d1twfa_ A:1114-1119,1296-1310,1312-1319,1326-1330 1k83 d1k83a_ A:1114-1119,1296-1310,1312-1319,1326-1330 1zyr d1zyrn1 N:1378-1384,1388-1394,1394-1410,1415-1420 2yu9 d2yu9a1 A:1114-1119,1296-1310,1312-1319,1326-1330 1i50 d1i50a_ A:1114-1119,1296-1310,1312-1319,1326-1330 2nvx d2nvxa1 A:1114-1119,1296-1310,1312-1319,1326-1330 2nvq d2nvqa1 A:1114-1119,1296-1310,1312-1319,1326-1330 2e2j d2e2ja1 A:1114-1119,1296-1310,1312-1319,1326-1330 1twc d1twca_ A:1114-1119,1296-1310,1312-1319,1326-1330 1iw7 d1iw7c_ C:467-474,482-488,487-494,530-534 2ja7 d2ja7a1 A:1114-1119,1296-1310,1312-1319,1326-1330 2ja6 d2ja6a1 A:1114-1119,1296-1310,1312-1319,1326-1330 2nvt d2nvta1 A:1114-1119,1296-1310,1312-1319,1326-1330 2ja7 d2ja7m1 M:1114-1119,1296-1310,1312-1319,1326-1330 1iw7 d1iw7m_ M:467-474,482-487,487-494,530-534 2ja5 d2ja5a1 A:1114-1119,1296-1310,1312-1319,1326-1330 2ppb d2ppbn1 N:1378-1384,1389-1394,1394-1410,1415-1420 2b8k d2b8ka1 A:1114-1119,1296-1310,1312-1319,1326-1330 2b63 d2b63a1 A:1114-1119,1296-1310,1312-1319,1326-1330 2ja8 d2ja8a1 A:1114-1119,1296-1310,1312-1319,1326-1330 2nvz d2nvza1 A:1114-1119,1296-1310,1312-1319,1326-1330 2o5j d2o5jn1 N:1378-1384,1389-1394,1394-1410,1415-1420 2o5j d2o5jm1 M:466-474,482-488,487-494,530-534 2be5 d2be5n1 N:1378-1384,1388-1394,1394-1410,1415-1420 2o5i d2o5im1 M:466-474,482-488,487-494,530-534 2a6h d2a6hd1 D:1378-1384,1389-1394,1394-1410,1415-1420 2be5 d2be5d1 D:1378-1384,1389-1394,1394-1410,1415-1420 2ppb d2ppbd1 D:1378-1384,1389-1394,1394-1410,1415-1420 2e2i d2e2ia1 A:1114-1119,1296-1310,1312-1320,1326-1330 2a69 d2a69d1 D:1378-1384,1388-1394,1394-1410,1415-1420 1zyr d1zyrm1 M:466-474,482-487,487-494,530-534 2a6h d2a6hm1 M:466-474,482-487,487-494,530-534 2be5 d2be5c1 C:466-474,482-487,487-494,530-534 2a68 d2a68c1 C:466-474,482-487,487-494,530-534 2be5 d2be5m1 M:466-474,482-487,487-494,530-534 2a69 d2a69m1 M:466-474,482-487,487-494,530-534 2a69 d2a69n1 N:1378-1384,1388-1394,1394-1410,1415-1420 1i6h d1i6ha_ A:1114-1119,1296-1310,1312-1320,1326-1330 2a68 d2a68n1 N:1378-1384,1388-1394,1394-1410,1415-1420 2a68 d2a68m1 M:466-474,482-487,487-494,530-534 2o5i d2o5in1 N:1378-1384,1389-1394,1394-1410,1415-1420 1i3q d1i3qa_ A:1114-1119,1296-1310,1312-1320,1326-1330 2ppb d2ppbc1 C:466-474,482-487,487-494,530-534 2e2h d2e2ha1 A:1114-1119,1296-1310,1312-1319,1326-1330 2cw0 d2cw0n1 N:1377-1383,1389-1395,1394-1410,1415-1420 2cw0 d2cw0n1 N:131-138,151-155,154-164,452-456 2a69 d2a69c1 C:466-474,482-487,487-494,530-534 2a6e d2a6en1 N:1378-1383,1389-1394,1394-1410,1415-1420 2a6h d2a6hc1 C:466-474,482-487,487-494,530-534 2a6e d2a6ed1 D:1378-1384,1389-1394,1394-1410,1415-1420 2o5j d2o5jc1 C:466-474,482-487,487-494,530-534 2a68 d2a68d1 D:1378-1384,1389-1394,1394-1410,1415-1420 1zyr d1zyrc1 C:466-474,482-487,487-494,530-534 2o5i d2o5ic1 C:466-474,482-487,487-494,530-534 2a6e d2a6ec1 C:466-474,482-487,487-494,530-534 2a6e d2a6em1 M:466-474,482-487,487-494,530-534 1smy d1smyn_ N:1378-1385,1389-1394,1394-1410,1415-1420 2cw0 d2cw0d1 D:1377-1385,1389-1395,1394-1410,1415-1420 3dxj d3dxjc1 C:465-474,482-487,487-494,530-534 2gho d2ghoc1 C:465-474,482-487,487-494,530-534 1smy d1smyd_ D:1377-1385,1387-1395,1394-1410,1415-1420 1i6v d1i6vd_ D:699-704,712-720,729-737,743-749 1ynn d1ynnd1 D:699-704,712-719,729-737,743-749 1zyr d1zyrd1 D:1377-1383,1389-1395,1394-1410,1415-1420 3dxj d3dxjn1 N:699-704,712-717,729-737,743-749 3dxj d3dxjm1 M:465-474,482-487,487-494,530-534 2cw0 d2cw0d1 D:699-704,712-721,729-737,743-749 2cw0 d2cw0n1 N:699-704,712-721,729-737,743-749 2a69 d2a69d1 D:699-704,712-721,729-737,743-749 2be5 d2be5d1 D:699-704,712-721,729-737,743-749 2o5i d2o5id1 D:699-704,712-721,729-737,743-749 3dxj d3dxjn1 N:1377-1384,1391-1395,1394-1410,1415-1420 2be5 d2be5n1 N:699-704,712-721,729-737,743-749 2a69 d2a69n1 N:699-704,712-721,729-737,743-749 2o5i d2o5in1 N:699-704,712-721,729-737,743-749 2a68 d2a68d1 D:699-704,712-721,729-737,743-749 2a68 d2a68n1 N:699-704,712-721,729-737,743-749 2a6e d2a6en1 N:699-704,712-721,729-737,743-749 2ppb d2ppbd1 D:699-704,712-721,729-737,743-749 2a6e d2a6ed1 D:699-704,712-721,729-737,743-749 2ppb d2ppbn1 N:699-704,712-721,729-737,743-749 3dxj d3dxjd1 D:699-704,712-721,729-737,743-749 2a6h d2a6hn1 N:699-704,712-721,729-737,743-749 2a6h d2a6hd1 D:699-704,712-721,729-737,743-749 1iw7 d1iw7d_ D:699-704,712-721,729-737,743-749 1iw7 d1iw7n_ N:699-704,712-721,729-737,743-749 1twh d1twha_ A:440-446,454-463,471-479,485-491 2o5j d2o5jd1 D:699-704,712-721,729-737,744-749 1smy d1smyd_ D:699-704,712-721,729-737,743-749 3dxj d3dxjd1 D:1377-1383,1391-1395,1394-1405,1415-1420 1twc d1twca_ A:440-446,454-463,471-479,485-491 1smy d1smyn_ N:699-704,712-721,729-737,743-749 1ynj d1ynjd1 D:699-704,713-719,729-737,743-749 1twa d1twaa_ A:438-446,454-463,471-479,485-491 1twg d1twga_ A:438-446,454-463,471-479,485-491 1i6h d1i6ha_ A:438-446,454-463,471-479,485-491 2ja7 d2ja7m1 M:438-446,454-463,471-479,485-491 1k83 d1k83a_ A:438-446,454-463,471-479,485-491 1i50 d1i50a_ A:438-446,454-463,471-479,485-491 1twf d1twfa_ A:438-446,454-463,471-479,485-491 2b8k d2b8ka1 A:438-446,454-463,471-479,485-491 2ja7 d2ja7a1 A:438-446,454-464,471-479,485-491 2nvq d2nvqa1 A:438-446,454-463,471-479,485-491 2ja6 d2ja6a1 A:438-446,454-464,471-479,485-491 2nvt d2nvta1 A:438-446,454-463,471-479,485-491 2yu9 d2yu9a1 A:438-446,454-463,471-479,485-491 2ja8 d2ja8a1 A:438-446,454-464,471-479,485-491 2b63 d2b63a1 A:438-446,454-463,471-479,485-491 2nvy d2nvya1 A:437-446,456-462,471-479,485-491 2ja5 d2ja5a1 A:438-446,454-464,471-479,485-491 2e2j d2e2ja1 A:438-446,454-463,471-479,485-491 2nvz d2nvza1 A:438-446,454-463,471-479,485-491 2e2h d2e2ha1 A:438-446,454-463,471-479,485-491 2e2i d2e2ia1 A:438-446,454-463,471-479,485-491 1ynj d1ynjd1 D:1147-1151,1162-1166,1167-1181,1184-1189 1i6v d1i6vd_ D:1147-1151,1162-1166,1167-1181,1184-1189 172. d.255.1 Tombusvirus P19 core protein, VP19 Tombusvirus P19 core protein, VP19 beta(2)-alpha-beta(2)-alpha; 2 layers: alpha/beta; antiparallel sheet: order 2134 1r9f d1r9fa_ A:58-66,67-75,91-103,108-117 1rpu d1rpua_ A:58-66,67-75,91-103,108-117 1rpu d1rpub_ B:57-66,67-76,79-91,108-117 1rpu d1rpub_ B:57-66,67-76,91-103,108-117 1r9f d1r9fa_ A:58-66,67-75,79-91,108-117 1rpu d1rpua_ A:58-66,67-75,79-91,108-117 174. d.58.25 Killer toxin KP6 alpha-subunit Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1kp6 d1kp6a_ A:13-22,48-54,57-69,70-77 1kp6 d1kp6a_ A:13-22,23-27,57-69,70-77 179. b.40.5 Inorganic pyrophosphatase OB-fold barrel, closed or partly opened n=5, S=10 or S=8; greek-key 1igp d1igpa_ A:86-98,100-110,127-143,149-157 1mjz d1mjza_ A:86-98,100-110,127-143,149-157 1faj d1faja_ A:86-97,100-110,127-143,150-157 1obw d1obwb_ B:86-97,100-110,127-143,150-157 1twl d1twla_ A:87-99,100-111,126-145,147-155 1ude d1udea_ A:87-99,100-111,126-146,149-156 1obw d1obwa_ A:86-98,100-110,127-145,149-157 1ude d1udeb_ B:87-99,100-111,126-146,149-156 2au9 d2au9a1 A:86-98,100-110,127-146,149-157 2auu d2auua1 A:86-98,100-110,127-146,149-157 2au8 d2au8a1 A:86-98,100-110,127-146,149-157 2au6 d2au6a1 A:86-98,100-110,127-146,149-157 1ipw d1ipwa_ A:86-97,101-110,127-145,150-157 1mjx d1mjxa_ A:86-98,99-110,127-146,149-157 1i6t d1i6ta_ A:86-98,100-110,127-146,149-157 1mjy d1mjyb_ B:86-98,99-110,127-146,149-157 1ino d1inoa_ A:86-98,100-110,127-146,149-157 1obw d1obwc_ C:86-98,99-110,127-146,149-157 1i40 d1i40a_ A:86-98,99-110,127-146,149-157 2eip d2eipa_ A:86-97,100-110,127-145,150-157 1mjy d1mjya_ A:86-98,99-110,127-146,149-157 1ipw d1ipwb_ B:86-98,99-110,127-146,149-157 1ude d1udec_ C:87-99,100-111,126-146,148-156 2eip d2eipb_ B:86-98,99-110,127-146,149-157 2prd d2prda_ A:86-98,99-110,125-147,149-157 1mjx d1mjxb_ B:86-98,99-110,127-146,149-157 1mjw d1mjwa_ A:86-98,99-110,127-146,149-157 1mjw d1mjwb_ B:86-98,99-110,127-146,149-157 1jfd d1jfda_ A:86-98,99-110,127-146,149-157 1jfd d1jfdb_ B:86-98,99-110,127-146,149-157 1qez d1qeze_ E:5083-5095,5096-5107,5124-5143,5146-5154 1qez d1qeza_ A:1083-1095,1096-1107,1124-1143,1146-1154 1qez d1qezd_ D:4083-4095,4096-4107,4124-4143,4146-4154 1qez d1qezc_ C:3083-3095,3096-3107,3124-3143,3146-3154 1qez d1qezb_ B:2083-2095,2096-2107,2124-2143,2146-2154 1qez d1qezf_ F:6083-6095,6096-6107,6124-6143,6146-6154 180. d.77.1 RL5-like RL5-like beta-alpha-beta(2)-alpha-beta(3)-alpha; 2 layers, alpha/beta; antiparallel beta-sheet: order 231654 1vs8 d1vs8f1 F:28-40,84-91,92-105,150-159 2otj d2otjd1 D:16-27,69-76,76-85,128-136 1vq5 d1vq5d1 D:16-27,69-76,76-87,128-136 1vq7 d1vq7d1 D:16-27,68-76,76-85,128-136 1vq4 d1vq4d1 D:16-27,69-76,76-87,128-136 1mji d1mjia_ A:32-43,86-95,95-110,154-163 1yij d1yijd1 D:16-27,69-76,76-87,128-136 1yit d1yitd1 D:16-27,69-76,76-85,128-136 2ogk d2ogkc1 C:4-16,51-59,60-76,118-127 2nwu d2nwua1 A:2-11,40-48,49-64,110-116 1vqk d1vqkd1 D:16-27,69-76,76-86,128-136 1vq8 d1vq8d1 D:16-27,69-76,76-86,128-136 1qvg d1qvgd_ D:16-27,67-76,76-87,128-136 1q7y d1q7yf_ F:16-28,67-76,76-85,128-136 1q86 d1q86f_ F:16-28,67-76,76-85,128-136 2ogk d2ogka1 A:4-16,51-59,60-76,118-127 1q82 d1q82f_ F:16-27,67-76,76-87,128-136 1nji d1njif_ F:16-27,67-76,76-85,128-136 1m90 d1m90f_ F:16-27,67-76,76-85,128-136 1kd1 d1kd1f_ F:16-27,67-76,76-85,128-136 1k73 d1k73f_ F:16-27,67-76,76-85,128-136 1jj2 d1jj2d_ D:16-27,67-76,76-85,128-136 1k8a d1k8af_ F:16-27,67-76,76-85,128-136 1kc8 d1kc8f_ F:16-27,67-76,76-85,128-136 1qvf d1qvfd_ D:16-27,67-76,76-85,128-136 1n8r d1n8rf_ F:16-27,67-76,76-85,128-136 1kqs d1kqsd_ D:16-27,67-76,76-85,128-136 1m1k d1m1kf_ F:16-27,67-76,76-85,128-136 1iq4 d1iq4b_ B:29-40,82-92,92-107,150-160 1k9m d1k9mf_ F:16-27,67-76,76-85,128-136 1q81 d1q81f_ F:16-28,67-76,76-85,128-136 1vqo d1vqod1 D:16-27,69-76,75-92,128-136 1vqp d1vqpd1 D:16-28,69-76,76-85,128-136 2qbc d2qbcf1 F:28-40,82-91,91-110,151-159 2qba d2qbaf1 F:28-40,82-91,91-110,151-159 1mji d1mjib_ B:32-44,88-95,95-110,151-163 2hgj d2hgjg1 G:32-42,90-96,95-111,154-163 2ogk d2ogkb1 B:5-16,48-59,60-76,118-126 2j03 d2j03g1 G:32-42,88-95,95-109,153-163 2hgu d2hgug1 G:32-42,90-95,95-105,153-163 2j01 d2j01g1 G:32-42,87-96,95-110,155-163 2nwu d2nwub1 B:2-12,39-49,49-64,110-116 1iq4 d1iq4a_ A:29-40,81-92,92-107,150-160 1yjn d1yjnd1 D:16-28,65-76,76-85,128-136 2hgq d2hgqg1 G:32-42,91-95,95-105,153-163 1yj9 d1yj9d1 D:16-28,65-76,76-87,128-136 3dll d3dlld1 D:29-38,84-92,92-106,150-160 2ogk d2ogkd1 D:4-16,48-59,60-76,118-127 1s72 d1s72d_ D:16-27,65-76,76-85,128-136 2otl d2otld1 D:16-27,65-76,76-87,128-136 1vq6 d1vq6d1 D:16-27,65-76,76-85,128-136 1yi2 d1yi2d1 D:16-27,65-76,76-87,128-136 1yjw d1yjwd1 D:16-27,65-76,76-85,128-136 1yhq d1yhqd1 D:16-27,65-76,76-85,128-136 2nrq d2nrqa1 A:4-14,48-60,59-74,118-125 1vqm d1vqmd1 D:16-27,65-76,76-86,128-136 1vq9 d1vq9d1 D:16-27,65-76,75-92,128-136 1vqn d1vqnd1 D:16-27,65-76,76-86,128-136 1vql d1vqld1 D:16-27,65-76,76-85,128-136 2qox d2qoxf1 F:28-37,82-91,91-106,150-158 2j28 d2j28f1 F:28-39,79-91,92-107,149-159 2awb d2awbf1 F:28-39,79-91,92-107,149-159 2pzz d2pzza1 A:2-12,40-49,50-62,103-110 2qp1 d2qp1f1 F:28-37,82-91,91-110,150-159 2qoz d2qozf1 F:28-37,82-91,91-110,150-159 2zjr d2zjrd1 D:29-38,82-92,91-111,150-160 2zjq d2zjqd1 D:29-38,82-92,91-111,150-160 2zjp d2zjpd1 D:29-38,81-92,91-111,150-160 3cf5 d3cf5d1 D:29-38,81-92,91-111,150-160 3bbx d3bbxf1 F:28-38,79-91,92-107,151-159 2aw4 d2aw4f1 F:28-38,79-91,92-107,151-159 2rdo d2rdof1 F:28-38,79-91,92-107,151-159 1vs6 d1vs6f1 F:28-38,78-91,92-106,151-158 181. c.67.2 PhnH-like single domain protein of similar topology to the core domain of PLP-transferases PLP-dependent transferase-like main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest 2fsu d2fsua1 A:132-140,146-152,154-164,189-193 182. d.76.2 BRK domain-like GYF/BRK domain-like beta(2)-alpha-beta(2)-alpha; 2 layers, alpha/beta 2v0f d2v0fa1 A:2647-2653,2654-2660,2668-2677,2678-2682 2v0e d2v0ea1 A:2570-2575,2576-2581,2587-2599,2600-2604 2cka d2ckaa1 A:2037-2042,2043-2048,2057-2066,2067-2071 2ckc d2ckca1 A:2570-2575,2576-2580,2587-2599,2600-2604 184. d.58.19 Bacterial exopeptidase dimerisation domain Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1xmb d1xmba2 A:214-227,285-295,297-317,318-325 2q43 d2q43a2 A:193-206,263-274,276-296,297-304 1vgy d1vgyb2 B:180-196,250-261,265-281,283-292 1fno d1fnoa3 A:206-219,271-282,283-303,309-322 1vix d1vixb2 B:206-219,271-281,283-305,309-322 1xmb d1xmba2 A:214-227,285-295,297-317,331-337 1ysj d1ysja2 A:173-188,246-255,257-280,281-296 1vix d1vixa2 A:206-219,271-282,283-305,309-322 1ysj d1ysjb2 B:173-188,246-255,257-280,281-296 2q43 d2q43a2 A:193-206,263-274,276-296,310-316 1cg2 d1cg2b2 B:214-230,279-290,291-309,314-324 1cg2 d1cg2c2 C:214-230,279-290,291-309,314-324 1cg2 d1cg2d2 D:214-230,279-290,291-309,314-324 1cg2 d1cg2a2 A:214-230,279-290,291-309,314-324 1r3n d1r3nc2 C:239-259,313-324,325-347,352-367 1r3n d1r3na2 A:239-259,313-324,325-347,352-367 1r3n d1r3nf2 F:239-259,313-324,325-347,352-367 1lfw d1lfwa2 A:184-197,340-352,356-369,379-385 1r3n d1r3ng2 G:239-259,313-324,325-347,352-367 1r3n d1r3nh2 H:239-259,313-324,325-347,352-367 1r3n d1r3nb2 B:239-259,313-324,325-347,352-367 1r43 d1r43a2 A:239-259,313-324,325-347,352-367 1lfw d1lfwa2 A:184-197,340-352,356-369,371-376 1r3n d1r3ne2 E:239-259,313-324,325-347,352-367 1r43 d1r43b2 B:239-259,313-324,325-347,352-367 1r3n d1r3nd2 D:239-259,313-324,325-347,352-367 1z2l d1z2lb2 B:205-225,281-292,293-316,317-332 2imo d2imoa2 A:210-229,281-292,293-316,317-332 2imo d2imob2 B:210-229,281-292,293-316,317-332 1z2l d1z2la2 A:210-229,281-292,293-316,317-332 1vgy d1vgya2 A:180-196,250-261,265-281,283-297 185. b.67.1 Tachylectin-2 5-bladed beta-propeller consists of five 4-stranded beta-sheet motifs; meander 1tl2 d1tl2a_ A:6-12,13-19,225-232,231-236 187. b.91.1 E2 regulatory, transactivation domain E2 regulatory, transactivation domain complex fold made of bifurcated and coiled beta-sheets 1tue d1tueb_ B:116-126,131-140,175-185,188-193 1qqh d1qqha_ A:112-122,127-136,171-180,184-190 1tue d1tuej_ J:116-126,131-140,175-184,188-193 2nnu d2nnua1 A:112-122,127-136,170-179,183-189 1tue d1tueg_ G:117-126,131-140,175-185,188-194 1r6n d1r6na_ A:112-122,127-136,170-179,183-189 1tue d1tuee_ E:117-126,131-140,175-185,188-194 1tue d1tueq_ Q:117-126,131-140,175-185,188-193 1tue d1tuel_ L:116-126,131-140,175-184,188-193 1r6k d1r6ka_ A:112-121,128-136,170-179,184-189 1dto d1dtoa_ A:112-121,127-136,170-179,184-188 191. d.128.1 Glutamine synthetase/guanido kinase Glutamine synthetase/guanido kinase duplication: common core consists of two beta-alpha-beta2-alpha repeats 2d33 d2d33a1 A:21-35,64-74,75-95,147-156 2d32 d2d32b1 B:21-35,64-74,75-95,147-156 2d32 d2d32a1 A:21-35,64-74,75-95,147-156 1va6 d1va6b_ B:21-35,64-74,75-95,147-156 2d33 d2d33d1 D:21-35,64-74,75-95,147-156 2d32 d2d32d1 D:21-35,64-74,75-95,147-156 2d33 d2d33b1 B:21-35,64-74,75-95,147-156 1v4g d1v4gd_ D:21-35,64-74,75-95,147-156 1va6 d1va6a_ A:21-35,64-74,75-95,147-156 1v4g d1v4gb_ B:21-35,64-74,75-95,147-156 1v4g d1v4ga_ A:21-35,64-74,75-95,147-156 2d33 d2d33c1 C:21-35,64-74,75-95,147-156 2d32 d2d32c1 C:21-35,64-74,75-95,147-156 1v4g d1v4gc_ C:21-35,64-74,75-95,147-156 1r8g d1r8ga_ A:12-26,57-67,68-91,133-141 1bg0 d1bg0a2 A:119-130,227-236,238-258,278-286 1m15 d1m15a2 A:119-130,227-237,238-258,278-286 1p52 d1p52a2 A:119-130,227-236,238-258,278-286 1sd0 d1sd0a2 A:119-130,227-236,238-258,278-286 1p50 d1p50a2 A:119-130,227-236,238-258,278-286 1rl9 d1rl9a2 A:119-130,227-237,238-258,278-286 1r8g d1r8gb_ B:11-26,57-67,68-91,133-141 1tt4 d1tt4b_ B:11-26,57-67,68-91,133-141 1tt4 d1tt4a_ A:11-26,57-67,68-91,133-141 2d6f d2d6fd3 D:7-18,180-192,193-212,219-229 2d6f d2d6fc3 C:7-18,179-192,193-212,219-229 2bvc d2bvcd2 D:135-140,223-231,234-257,258-262 2bvc d2bvcc2 C:135-140,223-231,234-257,258-262 2bvc d2bvce2 E:135-140,223-231,234-257,258-262 1r8g d1r8ga_ A:12-26,57-67,68-91,92-96 1zq1 d1zq1d3 D:14-25,182-195,198-217,225-235 1zq1 d1zq1c3 C:14-25,182-194,198-217,225-235 2f2a d2f2ab2 B:4-15,143-155,159-178,188-198 1tt4 d1tt4a_ A:11-26,57-67,68-91,92-96 2g5i d2g5ib2 B:3-15,143-155,159-178,188-199 1r8g d1r8gb_ B:11-26,57-67,68-91,92-96 1tt4 d1tt4b_ B:11-26,57-67,68-91,92-96 2g5h d2g5hb2 B:3-15,143-155,159-178,188-199 2dqn d2dqnb2 B:3-15,143-155,159-178,188-199 1u6r d1u6rb2 B:124-135,233-243,244-267,289-298 1vrp d1vrpb2 B:125-136,234-244,245-268,290-299 1vrp d1vrpa2 A:125-136,234-243,245-268,290-299 1u6r d1u6ra2 A:124-135,233-243,244-267,289-298 1crk d1crkd2 D:120-131,229-238,240-263,285-293 2df4 d2df4b2 B:2-15,143-154,159-178,188-200 1qh4 d1qh4c2 C:125-136,234-243,245-268,290-299 1htq d1htqk2 K:131-136,217-223,227-250,251-255 1qh4 d1qh4b2 B:125-136,234-243,245-268,290-299 1htq d1htqm2 M:131-136,217-223,227-250,251-255 1htq d1htqp2 P:131-136,217-223,227-250,251-255 1htq d1htqu2 U:131-136,217-223,227-250,251-255 1htq d1htqb2 B:131-136,217-223,227-250,251-255 1htq d1htqs2 S:131-136,217-223,227-250,251-255 1htq d1htqx2 X:131-136,217-223,227-250,251-255 1htq d1htqn2 N:131-136,217-223,227-250,251-255 1htq d1htqv2 V:131-136,217-223,227-250,251-255 1htq d1htqa2 A:131-136,217-223,227-250,251-255 1htq d1htqr2 R:131-136,217-223,227-250,251-255 1htq d1htql2 L:131-136,217-223,227-250,251-255 1htq d1htqh2 H:131-136,217-223,227-250,251-255 1htq d1htqg2 G:131-136,217-223,227-250,251-255 1htq d1htqo2 O:131-136,217-223,227-250,251-255 1htq d1htqc2 C:131-136,217-223,227-250,251-255 1htq d1htqi2 I:131-136,217-223,227-250,251-255 1htq d1htqj2 J:131-136,217-223,227-250,251-255 1htq d1htqt2 T:131-136,217-223,227-250,251-255 1htq d1htqd2 D:131-136,217-223,227-250,251-255 1htq d1htqe2 E:131-136,217-223,227-250,251-255 1htq d1htqw2 W:131-136,217-223,227-250,251-255 1htq d1htqq2 Q:131-136,217-223,227-250,251-255 1htq d1htqf2 F:131-136,217-223,227-250,251-255 1hto d1htog2 G:131-136,217-223,227-250,251-255 1hto d1htol2 L:131-136,217-223,227-250,251-255 1hto d1htow2 W:131-136,217-223,227-250,251-255 1hto d1htof2 F:131-136,217-223,227-250,251-255 1hto d1htou2 U:131-136,217-223,227-250,251-255 1hto d1htok2 K:131-136,217-223,227-250,251-255 1hto d1hton2 N:131-136,217-223,227-250,251-255 1hto d1htoo2 O:131-136,217-223,227-250,251-255 1hto d1htor2 R:131-136,217-223,227-250,251-255 1hto d1htot2 T:131-136,217-223,227-250,251-255 1hto d1htoc2 C:131-136,217-223,227-250,251-255 1hto d1htod2 D:131-136,217-223,227-250,251-255 1hto d1htob2 B:131-136,217-223,227-250,251-255 1hto d1htoi2 I:131-136,217-223,227-250,251-255 1hto d1htoq2 Q:131-136,217-223,227-250,251-255 1hto d1htop2 P:131-136,217-223,227-250,251-255 1hto d1htoe2 E:131-136,217-223,227-250,251-255 1hto d1htoa2 A:131-136,217-223,227-250,251-255 1hto d1htoj2 J:131-136,217-223,227-250,251-255 1hto d1htox2 X:131-136,217-223,227-250,251-255 1hto d1htov2 V:131-136,217-223,227-250,251-255 1hto d1htom2 M:131-136,217-223,227-250,251-255 1hto d1htos2 S:131-136,217-223,227-250,251-255 1hto d1htoh2 H:131-136,217-223,227-250,251-255 1crk d1crkb2 B:120-131,229-238,240-263,285-294 1qk1 d1qk1a2 A:120-131,229-238,240-263,285-294 1qh4 d1qh4d2 D:125-136,234-243,245-268,290-299 1qk1 d1qk1e2 E:120-131,229-238,240-263,285-294 1qk1 d1qk1b2 B:120-131,229-238,240-263,285-294 1qk1 d1qk1c2 C:120-131,229-238,240-263,285-294 1qk1 d1qk1g2 G:120-131,229-238,240-263,285-294 1qk1 d1qk1h2 H:120-131,229-238,240-263,285-294 1qk1 d1qk1d2 D:120-131,229-238,240-263,285-294 1qk1 d1qk1f2 F:120-131,229-238,240-263,285-294 1qh4 d1qh4a2 A:125-136,234-243,245-268,290-299 1g0w d1g0wa2 A:125-136,234-244,245-268,290-299 1crk d1crkc2 C:120-131,229-238,240-263,285-294 2crk d2crka2 A:125-136,234-243,245-268,290-299 1crk d1crka2 A:120-131,229-238,240-263,285-294 1i0e d1i0ea2 A:125-136,234-243,245-268,290-299 1i0e d1i0eb2 B:125-136,234-243,245-268,290-299 1i0e d1i0ec2 C:125-136,234-243,245-268,290-299 1i0e d1i0ed2 D:125-136,234-243,245-268,290-299 1lgr d1lgra2 A:131-136,217-224,227-250,251-255 1lgr d1lgri2 I:131-136,217-224,227-250,251-255 1lgr d1lgrf2 F:131-136,217-224,227-250,251-255 1lgr d1lgrc2 C:131-136,217-224,227-250,251-255 1lgr d1lgrj2 J:131-136,217-224,227-250,251-255 1lgr d1lgrg2 G:131-136,217-224,227-250,251-255 1lgr d1lgrl2 L:131-136,217-224,227-250,251-255 1lgr d1lgrk2 K:131-136,217-224,227-250,251-255 1lgr d1lgrb2 B:131-136,217-224,227-250,251-255 1lgr d1lgrh2 H:131-136,217-224,227-250,251-255 1lgr d1lgrd2 D:131-136,217-224,227-250,251-255 1lgr d1lgre2 E:131-136,217-224,227-250,251-255 2gls d2glsj2 J:131-136,217-224,227-250,251-255 2gls d2glsg2 G:131-136,217-224,227-250,251-255 2gls d2glsb2 B:131-136,217-224,227-250,251-255 2gls d2glsi2 I:131-136,217-224,227-250,251-255 2gls d2glse2 E:131-136,217-224,227-250,251-255 2gls d2glsc2 C:131-136,217-224,227-250,251-255 2gls d2glsf2 F:131-136,217-224,227-250,251-255 2gls d2glsa2 A:131-136,217-224,227-250,251-255 2gls d2glsd2 D:131-136,217-224,227-250,251-255 2gls d2glsk2 K:131-136,217-224,227-250,251-255 2gls d2glsh2 H:131-136,217-224,227-250,251-255 2gls d2glsl2 L:131-136,217-224,227-250,251-255 2lgs d2lgsd2 D:131-136,217-224,227-250,251-255 2lgs d2lgsc2 C:131-136,217-224,227-250,251-255 2lgs d2lgsi2 I:131-136,217-224,227-250,251-255 2lgs d2lgsl2 L:131-136,217-224,227-250,251-255 2lgs d2lgsk2 K:131-136,217-224,227-250,251-255 2lgs d2lgse2 E:131-136,217-224,227-250,251-255 2lgs d2lgsf2 F:131-136,217-224,227-250,251-255 2lgs d2lgsb2 B:131-136,217-224,227-250,251-255 2lgs d2lgsa2 A:131-136,217-224,227-250,251-255 2lgs d2lgsj2 J:131-136,217-224,227-250,251-255 2lgs d2lgsh2 H:131-136,217-224,227-250,251-255 2lgs d2lgsg2 G:131-136,217-224,227-250,251-255 2bvc d2bvcf2 F:135-140,224-231,234-257,258-262 2bvc d2bvcb2 B:135-140,224-231,234-257,258-262 1f52 d1f52b2 B:131-136,217-224,227-250,251-255 1f52 d1f52g2 G:131-136,217-224,227-250,251-255 1f52 d1f52a2 A:131-136,217-224,227-250,251-255 1f52 d1f52i2 I:131-136,217-224,227-250,251-255 1f52 d1f52k2 K:131-136,217-224,227-250,251-255 1f52 d1f52f2 F:131-136,217-224,227-250,251-255 1f52 d1f52d2 D:131-136,217-224,227-250,251-255 1f52 d1f52e2 E:131-136,217-224,227-250,251-255 1f52 d1f52c2 C:131-136,217-224,227-250,251-255 1f52 d1f52h2 H:131-136,217-224,227-250,251-255 1f52 d1f52l2 L:131-136,217-224,227-250,251-255 2bvc d2bvca2 A:135-140,224-231,234-257,258-262 1f52 d1f52j2 J:131-136,217-224,227-250,251-255 1f1h d1f1hg2 G:131-136,217-224,227-250,251-255 1f1h d1f1hl2 L:131-136,217-224,227-250,251-255 1f1h d1f1hh2 H:131-136,217-224,227-250,251-255 1f1h d1f1hb2 B:131-136,217-224,227-250,251-255 1f1h d1f1hj2 J:131-136,217-224,227-250,251-255 1f1h d1f1hd2 D:131-136,217-224,227-250,251-255 1f1h d1f1ha2 A:131-136,217-224,227-250,251-255 1f1h d1f1hc2 C:131-136,217-224,227-250,251-255 1f1h d1f1hk2 K:131-136,217-224,227-250,251-255 1f1h d1f1he2 E:131-136,217-224,227-250,251-255 1f1h d1f1hi2 I:131-136,217-224,227-250,251-255 1f1h d1f1hf2 F:131-136,217-224,227-250,251-255 1fpy d1fpye2 E:131-136,217-224,227-250,251-255 1fpy d1fpyh2 H:131-136,217-224,227-250,251-255 1fpy d1fpyk2 K:131-136,217-224,227-250,251-255 1fpy d1fpyd2 D:131-136,217-224,227-250,251-255 1fpy d1fpyg2 G:131-136,217-224,227-250,251-255 1fpy d1fpyj2 J:131-136,217-224,227-250,251-255 1fpy d1fpyb2 B:131-136,217-224,227-250,251-255 1fpy d1fpya2 A:131-136,217-224,227-250,251-255 1fpy d1fpyi2 I:131-136,217-224,227-250,251-255 1fpy d1fpyc2 C:131-136,217-224,227-250,251-255 1fpy d1fpyf2 F:131-136,217-224,227-250,251-255 1fpy d1fpyl2 L:131-136,217-224,227-250,251-255 192. d.58.51 eIF-2-alpha, C-terminal domain Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2aho d2ahob3 B:176-187,225-234,238-258,259-264 1q8k d1q8ka2 A:187-198,233-241,242-265,266-272 2qn6 d2qn6b1 B:176-187,225-234,235-258,259-264 2qmu d2qmub1 B:175-187,225-234,235-258,259-265 194. d.26.2 Colicin E3 immunity protein FKBP-like core: beta(2)-alpha-beta(2); antiparallel beta-sheet 1jch d1jchb_ B:1-11,14-26,28-36,70-80 1jch d1jchd_ D:1-11,14-26,28-36,70-80 1e44 d1e44a_ A:1-12,13-26,28-36,71-80 3eip d3eipa_ A:1-12,13-26,28-36,70-80 3eip d3eipb_ B:1-12,13-26,28-36,70-80 2b5u d2b5ud1 D:1-12,13-26,29-36,70-80 2b5u d2b5ub1 B:1-12,13-26,29-36,70-80 2b5u d2b5ud1 D:1-12,13-26,38-46,70-80 2b5u d2b5ub1 B:1-12,13-26,38-46,70-80 195. d.311.1 ImmE5-like ImmE5-like alpha-beta(2)-alpha-beta; 2 layers, a/b; antiparallel beta-sheet, order 213 2fhz d2fhza1 A:47-57,67-71,80-99,101-108 2dfx d2dfxi1 I:46-56,66-70,75-98,100-107 196. c.82.1 ALDH-like binds NAD differently from other NAD(P)-dependent oxidoreductases ! ALDH-like consists of two similar domains with 3 layers (a/b/a) each; duplication ! core: parallel beta-sheet of 5 strands, order 32145 1a4z d1a4zc_ C:21-25,26-30,55-71,217-222 1a4z d1a4za_ A:21-25,26-30,55-71,217-222 1ag8 d1ag8d_ D:21-25,26-30,55-71,217-222 1a4z d1a4zb_ B:21-25,26-30,55-71,217-222 1ag8 d1ag8a_ A:21-25,26-30,55-71,217-222 1ag8 d1ag8c_ C:21-25,26-30,55-71,217-222 1a4z d1a4zd_ D:21-25,26-30,55-71,217-222 1o02 d1o02c_ C:21-25,26-30,55-71,217-222 1o04 d1o04c_ C:21-25,26-30,55-71,217-222 1ag8 d1ag8b_ B:21-25,26-30,55-71,217-222 1nzz d1nzza_ A:21-25,26-30,55-71,217-222 1o05 d1o05e_ E:21-25,26-30,55-71,217-222 1o01 d1o01c_ C:21-25,26-30,55-71,217-222 1o05 d1o05a_ A:21-25,26-30,55-71,217-222 1nzw d1nzwe_ E:21-25,26-30,55-71,217-222 1nzx d1nzxa_ A:21-25,26-30,55-71,217-222 2vle d2vlea1 A:21-25,26-30,55-71,217-222 1nzw d1nzwc_ C:21-25,26-30,55-71,217-222 1nzz d1nzzc_ C:21-25,26-30,55-71,217-222 1cw3 d1cw3g_ G:21-25,26-30,55-71,217-222 1o01 d1o01b_ B:21-25,26-30,55-71,217-222 2vle d2vlec1 C:21-25,26-30,55-71,217-222 1o05 d1o05f_ F:21-25,26-30,55-71,217-222 2vle d2vlee1 E:21-25,26-30,55-71,217-222 1o05 d1o05c_ C:21-25,26-30,55-71,217-222 1bi9 d1bi9d_ D:21-25,26-30,55-71,217-222 1o04 d1o04a_ A:21-25,26-30,55-71,217-222 2vle d2vlef1 F:21-25,26-30,55-71,217-222 1nzz d1nzzh_ H:21-25,26-30,55-71,217-222 1o01 d1o01h_ H:21-25,26-30,55-71,217-222 1nzw d1nzwh_ H:21-25,26-30,55-71,217-222 1o01 d1o01f_ F:21-25,26-30,55-71,217-222 1o00 d1o00c_ C:21-25,26-30,55-71,217-222 1o02 d1o02b_ B:21-25,26-30,55-71,217-222 1nzx d1nzxf_ F:21-25,26-30,55-71,217-222 1cw3 d1cw3f_ F:21-25,26-30,55-71,217-222 1nzw d1nzwb_ B:21-25,26-30,55-71,217-222 1nzz d1nzzb_ B:21-25,26-30,55-71,217-222 1o04 d1o04h_ H:21-25,26-30,55-71,217-222 1nzw d1nzwa_ A:21-25,26-30,55-71,217-222 1o04 d1o04b_ B:21-25,26-30,55-71,217-222 1cw3 d1cw3b_ B:21-25,26-30,55-71,217-222 2vle d2vleb1 B:21-25,26-30,55-71,217-222 1cw3 d1cw3e_ E:21-25,26-30,55-71,217-222 1o05 d1o05b_ B:21-25,26-30,55-71,217-222 1o02 d1o02a_ A:21-25,26-30,55-71,217-222 1nzx d1nzxc_ C:21-25,26-30,55-71,217-222 1nzx d1nzxh_ H:21-25,26-30,55-71,217-222 1o01 d1o01a_ A:21-25,26-30,55-71,217-222 1o02 d1o02h_ H:21-25,26-30,55-71,217-222 2vle d2vleh1 H:21-25,26-30,55-71,217-222 2vle d2vleg1 G:21-25,26-30,55-71,217-222 2vle d2vled1 D:21-25,26-30,55-71,217-222 1o00 d1o00a_ A:21-25,26-30,55-71,217-222 1o00 d1o00f_ F:21-25,26-30,55-71,217-222 1nzw d1nzwd_ D:21-25,26-30,55-71,217-222 1nzz d1nzze_ E:21-25,26-30,55-71,217-222 1nzw d1nzwf_ F:21-25,26-30,55-71,217-222 1o04 d1o04g_ G:21-25,26-30,55-71,217-222 1o01 d1o01d_ D:21-25,26-30,55-71,217-222 1o04 d1o04f_ F:21-25,26-30,55-71,217-222 1nzx d1nzxd_ D:21-25,26-30,55-71,217-222 1nzx d1nzxb_ B:21-25,26-30,55-71,217-222 1o05 d1o05d_ D:21-25,26-30,55-71,217-222 1cw3 d1cw3c_ C:21-25,26-30,55-71,217-222 1nzz d1nzzf_ F:21-25,26-30,55-71,217-222 1o00 d1o00e_ E:21-25,26-30,55-71,217-222 1o04 d1o04d_ D:21-25,26-30,55-71,217-222 1o9j d1o9ja_ A:21-25,26-30,55-71,217-222 1o00 d1o00b_ B:21-25,26-30,55-71,217-222 1o9j d1o9jb_ B:21-25,26-30,55-71,217-222 1o00 d1o00h_ H:21-25,26-30,55-71,217-222 1cw3 d1cw3d_ D:21-25,26-30,55-71,217-222 1o02 d1o02d_ D:21-25,26-30,55-71,217-222 1nzx d1nzxe_ E:21-25,26-30,55-71,217-222 1o05 d1o05h_ H:21-25,26-30,55-71,217-222 1o02 d1o02f_ F:21-25,26-30,55-71,217-222 1o05 d1o05g_ G:21-25,26-30,55-71,217-222 1o02 d1o02e_ E:21-25,26-30,55-71,217-222 1o04 d1o04e_ E:21-25,26-30,55-71,217-222 1o01 d1o01g_ G:21-25,26-30,55-71,217-222 1o01 d1o01e_ E:21-25,26-30,55-71,217-222 1o00 d1o00d_ D:21-25,26-30,55-71,217-222 1nzx d1nzxg_ G:21-25,26-30,55-71,217-222 1nzw d1nzwg_ G:21-25,26-30,55-71,217-222 1o02 d1o02g_ G:21-25,26-30,55-71,217-222 1cw3 d1cw3h_ H:21-25,26-30,55-71,217-222 1o9j d1o9jd_ D:21-25,26-30,55-71,217-222 1cw3 d1cw3a_ A:21-25,26-30,55-71,217-222 1nzz d1nzzg_ G:21-25,26-30,55-71,217-222 1o00 d1o00g_ G:21-25,26-30,55-71,217-222 1nzz d1nzzd_ D:21-25,26-30,55-71,217-222 1bi9 d1bi9b_ B:21-25,26-30,55-71,217-222 1bi9 d1bi9c_ C:21-25,26-30,55-71,217-222 1bxs d1bxsc_ C:21-25,26-30,55-71,217-222 1bxs d1bxsa_ A:21-25,26-30,55-71,217-222 1bxs d1bxsd_ D:21-25,26-30,55-71,217-222 1bxs d1bxsb_ B:21-25,26-30,55-71,217-222 1o9j d1o9jc_ C:21-25,26-30,55-71,217-222 1bi9 d1bi9a_ A:21-25,26-30,55-71,217-222 1wnb d1wnbc_ C:4-8,9-13,37-58,196-200 1wnb d1wnbd_ D:4-8,9-13,37-58,196-200 1wnd d1wnda_ A:4-8,9-13,37-58,196-200 1qi6 d1qi6a_ A:6-10,11-15,38-60,202-206 1wnd d1wndb_ B:4-8,9-13,37-58,196-200 1wnb d1wnbb_ B:4-8,9-13,37-58,196-200 1qi6 d1qi6c_ C:6-10,11-15,38-60,202-206 1wnd d1wndd_ D:4-8,9-13,37-58,196-200 1qi6 d1qi6b_ B:6-10,11-15,38-60,202-206 1qi6 d1qi6d_ D:6-10,11-15,38-60,202-206 2euh d2euhc_ C:6-10,11-15,38-60,202-206 2euh d2euhd_ D:6-10,11-15,38-60,202-206 2euh d2euha_ A:6-10,11-15,38-60,202-206 1wnd d1wndc_ C:4-8,9-13,37-58,196-200 2euh d2euhb_ B:6-10,11-15,38-60,202-206 1wnb d1wnba_ A:4-8,9-13,37-58,196-200 1euh d1euha_ A:6-10,11-15,38-60,202-206 1euh d1euhc_ C:6-10,11-15,38-60,202-206 1euh d1euhb_ B:6-10,11-15,38-60,202-206 1euh d1euhd_ D:6-10,11-15,38-60,202-206 197. d.284.1 PurS-like segment-swapped dimer: the swapped segment is made of the first helix and second strand; a single long strand is formed by strands 2 and 3 of each subunit ! PurS-like consists of two alpha+beta subdomains with some similarity to the ferredoxin-like fold 1gtd d1gtdb_ B:2-12,34-48,51-69,72-82 1gtd d1gtda_ A:2-12,34-48,51-69,72-82 1twj d1twja_ A:1-11,33-48,53-68,71-80 1twj d1twjd_ D:1-11,33-48,53-68,71-80 1vq3 d1vq3c_ C:2-13,36-51,53-71,74-82 1twj d1twjc_ C:1-11,33-48,53-68,71-79 1twj d1twjb_ B:1-11,33-48,53-68,71-80 1t4a d1t4aa_ A:1-11,33-48,53-68,71-80 1t4a d1t4ab_ B:1-11,33-48,53-68,71-80 1t3t d1t3ta3 A:72-80,102-116,120-132,136-141 1vq3 d1vq3a_ A:2-13,35-51,53-71,74-82 1vq3 d1vq3b_ B:2-13,35-51,53-71,74-82 1vq3 d1vq3d_ D:2-13,35-51,53-71,74-82 198. d.41.2 Nicotinate/Quinolinate PRTase N-terminal domain-like alpha/beta-Hammerhead core: beta-BETA-alpha-beta-BETA-beta-alpha; contains a beta-hammerhead motif similar to that in barrel-sandwich hybrids 1yir d1yird2 D:38-46,109-118,118-143,359-368 1yir d1yirc2 C:38-46,109-118,118-143,359-368 1yir d1yira2 A:38-46,109-118,118-143,359-368 1yir d1yirb2 B:38-46,109-118,118-143,359-368 1ybe d1ybea2 A:53-62,131-140,140-167,391-401 1ybe d1ybeb2 B:53-61,131-140,140-168,392-401 1vlp d1vlpa1 A:31-39,114-124,128-149,375-384 1vlp d1vlpc1 C:31-40,114-124,128-149,374-384 1vlp d1vlpd1 D:31-40,114-124,128-149,374-384 1vlp d1vlpb1 B:30-39,114-124,128-149,375-384 1qpq d1qpqd2 D:1540-1549,1586-1596,1603-1629,1780-1785 1qpq d1qpqc2 C:1040-1049,1086-1096,1103-1129,1280-1285 1qpr d1qprf2 F:40-49,86-96,103-129,280-285 1qpo d1qpod2 D:1540-1549,1586-1596,1603-1629,1780-1785 1qpn d1qpnd2 D:1540-1549,1586-1596,1603-1629,1780-1785 1qpq d1qpqf2 F:2540-2549,2586-2596,2603-2629,2780-2785 1qpr d1qprd2 D:40-49,86-96,103-129,280-285 1qpo d1qpof2 F:2540-2549,2586-2596,2603-2629,2780-2785 1qpn d1qpne2 E:2040-2049,2086-2096,2103-2129,2280-2285 1qpo d1qpoc2 C:1040-1049,1086-1096,1103-1129,1280-1285 1qpq d1qpqe2 E:2040-2049,2086-2096,2103-2129,2280-2285 1qpq d1qpqb2 B:540-549,586-596,603-629,780-785 1qpn d1qpnf2 F:2540-2549,2586-2596,2603-2629,2780-2785 1qpr d1qpre2 E:40-49,86-96,103-129,280-285 1qpr d1qpra2 A:40-49,86-96,103-129,280-285 1qpr d1qprc2 C:40-49,86-96,103-129,280-285 1qpo d1qpoe2 E:2040-2049,2086-2096,2103-2129,2280-2285 1qpr d1qprb2 B:40-49,86-96,103-129,280-285 1qpq d1qpqa2 A:40-49,86-96,103-129,280-285 1qpn d1qpnc2 C:1040-1049,1086-1096,1103-1129,1280-1285 1qpn d1qpnb2 B:540-549,586-596,603-629,780-785 1qpo d1qpoa2 A:40-49,86-96,103-129,280-285 1qpo d1qpob2 B:540-549,586-596,603-629,780-785 1qpn d1qpna2 A:40-49,86-96,103-129,280-285 2f7f d2f7fa2 A:34-41,113-120,127-153,330-340 1qap d1qapb2 B:54-63,99-109,116-142,290-296 1qap d1qapa2 A:54-63,99-109,116-142,290-295 1ytd d1ytda2 A:36-46,91-99,105-131,301-311 2i14 d2i14c2 C:1036-1044,1087-1094,1101-1127,1300-1308 2i14 d2i14a2 A:36-44,87-94,101-127,300-308 2i14 d2i14b2 B:436-444,487-494,501-527,700-708 2i14 d2i14d2 D:1436-1444,1487-1494,1501-1527,1700-1708 2i14 d2i14e2 E:2036-2044,2087-2094,2101-2127,2300-2308 2i14 d2i14f2 F:2436-2444,2487-2494,2501-2527,2700-2708 1o4u d1o4ua2 A:30-41,72-83,90-116,265-272 1o4u d1o4ub2 B:30-41,72-83,90-116,265-272 199. e.38.1 Release factor Release factor 4 domains: (1) 3-helical bundle; (2) alpha+beta of ferredoxin-like fold (3 and 4) alpha+beta of dsRDB-like fold 1gqe d1gqea_ A:127-135,175-185,187-196,213-225 2b3t d2b3tb1 B:110-120,157-168,170-179,196-208 1rq0 d1rq0b_ B:486-497,534-547,547-556,573-585 1rq0 d1rq0c_ C:886-897,934-947,947-956,973-985 1rq0 d1rq0a_ A:86-97,134-147,147-156,173-185 2fvo d2fvoa1 A:85-97,134-147,147-156,173-185 204. d.129.9 RalF, C-terminal domain contains a single copy of this fold decorated with additional structures ! TBP-like beta-alpha-beta(4)-alpha 1xsz d1xsza2 A:201-206,291-299,303-316,319-324 1xsz d1xszb2 B:201-206,291-299,303-316,319-324 206. d.371.1 YehR-like YehR-like beta(3)-alpha-beta(2)-alpha(3)-beta; 2 layers, a/b; antiparallel beta-sheet, order: 612354 2joe d2joea1 A:5-15,16-27,114-126,127-131 207. d.343.1 MM3350-like MM3350-like beta(2)-alpha-beta(4); antiparallel beta-sheet; order: 216534; similar to a ubiquitin-like fold with the extra C-terminal strand inserted in the middle of the beta-sheet 2i1s d2i1sa1 A:6-16,22-30,33-46,110-123 2i1s d2i1sb1 B:6-16,22-30,33-46,110-123 210. d.58.41 SEA domain Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1ivz d1ivza_ A:10-22,78-89,95-108,122-128 211. d.324.1 DUSP-like DUSP-like alpha-beta-alpha-X-beta-alpha-beta; three-helical bundle capped at one end by antiparallel beta-sheet, order: 213 1w6v d1w6va1 A:28-34,89-93,93-105,113-117 212. b.112.1 C-terminal domain of mollusc hemocyanin analogous to the Ig-like domain of arthropod hemocyanin; similar sequential but different spatial position relative the shared domain ! C-terminal domain of mollusc hemocyanin six-stranded beta-sandwich, jelly-roll/greek-key topology 1lnl d1lnlb2 B:319-330,335-344,361-369,375-385 1js8 d1js8b2 B:2805-2817,2819-2832,2848-2856,2862-2872 1js8 d1js8a2 A:2805-2817,2819-2832,2848-2856,2862-2872 1lnl d1lnla2 A:318-330,333-346,361-369,375-385 1lnl d1lnlc2 C:318-330,332-346,361-369,375-385 213. d.63.1 CYTH-like phosphatases CYTH-like phosphatases duplication of beta-alpha-beta(3) motif: antiparallel beta sheet forms wide barrel (n=8, S=16) with a channel running through it 2aca d2acab1 B:34-50,59-69,92-104,105-114 2aca d2acaa1 A:34-50,59-69,92-104,105-114 2fbl d2fblb1 B:18-29,35-43,66-78,80-92 2fbl d2fbla1 A:18-29,35-43,66-78,80-92 1d8h d1d8hb_ B:368-383,389-398,440-448,450-465 1d8h d1d8ha_ A:368-383,389-399,440-448,450-465 1d8h d1d8hc_ C:368-383,389-399,440-448,450-465 1yem d1yema_ A:23-37,41-51,79-91,93-108 1d8i d1d8ic_ C:368-383,389-399,440-449,450-465 1d8i d1d8ia_ A:368-383,389-399,440-449,450-465 1d8i d1d8ib_ B:368-383,389-399,440-449,450-465 1yem d1yemb_ B:23-37,41-51,79-91,93-108 2jmu d2jmua1 A:27-42,51-58,105-114,115-134 214. g.89.1 CHY zinc finger-like CHY zinc finger-like trimetal-bound fold; integration of HIT/MYND-like and rubredoxin-like fingers 2dkt d2dkta1 A:25-32,33-38,39-48,57-63 215. d.309.1 AMMECR1-like AMMECR1-like duplication; contains two beta(2)-alpha-beta(2) structural repeats, swapped with C-terminal strands; extra N-terminal helix and C-terminal strand 1vaj d1vaja1 A:44-54,61-72,74-90,103-117 1wsc d1wsca1 A:143-149,153-159,168-181,192-204 1zq7 d1zq7d1 D:44-54,55-67,69-85,99-112 1zq7 d1zq7b1 B:44-54,55-67,69-85,99-112 1zq7 d1zq7c1 C:44-54,55-67,69-85,99-112 1zq7 d1zq7a1 A:44-54,55-67,69-85,99-112 1vaj d1vaja1 A:133-140,141-147,172-179,181-195 1vaj d1vaja1 A:133-140,141-147,157-170,181-195 1zq7 d1zq7a1 A:128-135,136-143,167-174,175-189 1zq7 d1zq7c1 C:128-135,136-142,167-174,175-189 1zq7 d1zq7d1 D:128-135,136-142,167-174,175-189 1zq7 d1zq7a1 A:128-135,136-143,152-165,175-189 1zq7 d1zq7d1 D:128-135,136-142,152-165,175-189 1zq7 d1zq7c1 C:128-135,136-142,152-165,175-189 1zq7 d1zq7b1 B:128-135,136-142,152-165,175-189 1zq7 d1zq7b1 B:128-135,136-142,167-174,175-189 1wsc d1wsca1 A:55-66,67-77,83-99,112-126 216. c.81.1 Formate dehydrogenase/DMSO reductase, domains 1-3 molybdopterine enzyme ! Formate dehydrogenase/DMSO reductase, domains 1-3 contains of two similar intertwined domains related by pseudo dyad; duplication ! core: 3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32451 2fug d2fugc2 C:308-314,315-320,321-337,599-603 2fug d2fug32 3:308-314,315-320,321-337,599-603 2fug d2fugu2 U:308-314,315-320,321-337,599-603 2fug d2fugl2 L:308-314,315-320,321-337,599-603 1tmo d1tmoa2 A:59-63,81-86,87-107,479-484 1ogy d1ogye2 E:72-77,87-91,92-112,494-499 1ogy d1ogya2 A:72-77,87-91,92-112,494-499 1ogy d1ogym2 M:72-77,87-91,92-112,494-499 1ogy d1ogyg2 G:72-77,87-91,92-112,494-499 1ogy d1ogyc2 C:72-77,87-91,92-112,494-499 1ogy d1ogyi2 I:72-77,87-91,92-112,494-499 1ogy d1ogyo2 O:72-77,87-91,92-112,494-499 1ogy d1ogyk2 K:72-77,87-91,92-112,494-499 1ti6 d1ti6k2 K:78-83,108-112,113-133,537-542 1ti2 d1ti2e2 E:78-83,108-112,113-133,537-542 1vlf d1vlfw2 W:78-83,108-112,113-133,537-542 1ti2 d1ti2k2 K:78-83,108-112,113-133,537-542 1vld d1vlds2 S:78-83,108-112,113-133,537-542 1vld d1vldo2 O:78-83,108-112,113-133,537-541 1vld d1vldu2 U:78-83,108-112,113-133,537-541 1vle d1vles2 S:78-83,108-112,113-133,537-542 1ti2 d1ti2c2 C:78-83,108-112,113-133,537-541 1vle d1vlew2 W:78-83,108-112,113-133,537-542 1vle d1vleo2 O:78-83,108-112,113-133,537-542 1vlf d1vlfq2 Q:78-83,108-112,113-133,537-542 1ti6 d1ti6c2 C:78-83,108-112,113-133,537-542 1vlf d1vlfs2 S:78-83,108-112,113-133,537-542 1vlf d1vlfo2 O:78-83,108-112,113-133,537-542 1ti4 d1ti4c2 C:78-83,108-112,113-133,537-542 1vld d1vldm2 M:78-83,108-112,113-133,537-541 1vlf d1vlfm2 M:78-83,108-112,113-133,537-542 1vle d1vlem2 M:78-83,108-112,113-133,537-542 1vle d1vleq2 Q:78-83,108-112,113-133,537-542 1ti2 d1ti2a2 A:78-83,108-112,113-133,537-541 1ti6 d1ti6a2 A:78-83,108-112,113-133,537-542 1ti6 d1ti6e2 E:78-83,108-112,113-133,537-542 1vlf d1vlfu2 U:78-83,108-112,113-133,537-542 1ti2 d1ti2g2 G:78-83,108-112,113-133,537-542 1ti6 d1ti6i2 I:78-83,108-112,113-133,537-542 1ti6 d1ti6g2 G:78-83,108-112,113-133,537-542 1ti4 d1ti4g2 G:78-83,108-112,113-133,537-542 1ti4 d1ti4e2 E:78-83,108-112,113-133,537-542 1ti2 d1ti2i2 I:78-83,108-112,113-133,537-542 1ti4 d1ti4i2 I:78-83,108-112,113-133,537-542 1vld d1vldq2 Q:78-83,108-112,113-133,537-542 1g8j d1g8jc2 C:122-128,129-134,135-155,525-529 1g8j d1g8ja2 A:122-128,129-134,135-155,525-529 1g8k d1g8kc2 C:122-128,129-134,135-155,525-530 1g8k d1g8ka2 A:122-128,129-134,135-155,525-530 1g8k d1g8kg2 G:122-128,129-134,135-155,525-530 1g8k d1g8ke2 E:122-128,129-134,135-155,525-530 1g8k d1g8kc2 C:122-128,129-134,491-506,525-530 1g8k d1g8ke2 E:122-128,129-134,491-506,525-530 1g8k d1g8kg2 G:122-128,129-134,491-506,525-530 1g8k d1g8ka2 A:122-128,129-134,491-506,525-530 217. d.252.1 CheC-like CheC-like duplication: tandem repeat of two intertwined alpha-beta-(X)-beta(2) motifs 1squ d1squb_ B:41-51,53-60,82-108,110-122 1xko d1xkoa_ A:41-51,53-61,82-105,110-122 1squ d1squa_ A:41-51,53-61,82-108,110-122 1xko d1xkob_ B:41-51,52-61,82-108,110-122 1xkr d1xkra_ A:59-70,72-80,103-130,132-144 2f9z d2f9za1 A:59-70,72-80,103-130,132-144 2f9z d2f9zb1 B:59-70,72-80,103-130,132-144 1xko d1xkob_ B:41-51,52-61,61-74,110-122 1squ d1squa_ A:41-51,53-61,61-74,110-122 1xko d1xkoa_ A:41-51,53-61,61-74,110-122 218. d.58.61 MTH889-like assembles into hexameric ring-like structures with the formation of a singe beta-barrel sheet of 24 strands Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2raq d2raqa1 A:4-16,47-59,61-73,74-86 3bpd d3bpdm1 M:2-15,45-57,59-71,72-84 3bpd d3bpda1 A:2-15,45-57,59-71,72-84 3bpd d3bpdf1 F:2-15,45-57,59-71,72-84 3bpd d3bpdc1 C:2-14,45-57,59-71,72-84 3bpd d3bpdh1 H:2-15,45-57,59-71,72-84 3bpd d3bpdj1 J:2-15,45-57,59-71,72-84 3bpd d3bpdb1 B:2-15,45-57,59-71,72-84 3bpd d3bpde1 E:2-15,45-57,59-71,72-84 3bpd d3bpdl1 L:2-15,45-57,59-71,72-84 2raq d2raqe1 E:5-16,47-59,61-73,74-86 3bpd d3bpdn1 N:2-15,45-57,59-71,72-84 3bpd d3bpdd1 D:2-15,45-57,59-71,72-84 2raq d2raqg1 G:4-16,47-59,61-73,74-86 2raq d2raqf1 F:4-16,47-59,61-73,74-86 3bpd d3bpdi1 I:2-15,45-57,59-71,71-84 2raq d2raqd1 D:5-16,47-59,61-73,74-86 3bpd d3bpdg1 G:1-15,45-57,59-71,72-84 2raq d2raqb1 B:3-16,47-59,61-73,74-86 3bpd d3bpdk1 K:3-15,45-57,59-71,72-84 2raq d2raqc1 C:5-16,47-59,61-73,74-86 219. d.116.1 YbaK/ProRS associated domain YbaK/ProRS associated domain core: alpha-beta-alpha-beta(2)-(alpha-beta)2-alpha-beta(2)-alpha-beta; 3 layers; bifurcated mixed sheet 1wdv d1wdva_ A:41-51,53-62,67-76,78-82 1wdv d1wdvb_ B:41-51,53-62,67-76,78-82 1dbx d1dbxa_ A:43-53,58-66,71-80,83-87 1dbu d1dbua_ A:43-53,58-66,71-80,83-87 1dbx d1dbxb_ B:43-53,58-66,71-80,83-87 1vjf d1vjfa_ A:43-52,54-63,68-77,80-84 220. d.94.2 Putative transcriptional regulator TM1602, C-terminal domain HPr-like beta-alpha-beta(2)-alpha-beta-alpha; 2 layers: a/b; antiparallel sheet 1423 1j5y d1j5ya2 A:96-105,109-118,119-134,144-153 221. d.175.1 Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain unusual fold 1vqq d1vqqa2 A:159-174,211-218,221-232,233-244 1mws d1mwsa2 A:159-174,211-218,221-232,233-244 1mwt d1mwta2 A:159-174,211-218,221-232,233-244 1mwu d1mwua2 A:159-174,211-218,221-232,233-244 1mwt d1mwtb2 B:159-174,211-218,221-232,233-244 1mwu d1mwub2 B:159-174,211-218,221-232,233-244 1mwr d1mwra2 A:159-174,211-218,221-232,233-244 1vqq d1vqqb2 B:159-174,211-218,221-232,233-244 1mws d1mwsb2 B:159-174,211-218,221-232,233-244 1rp5 d1rp5b3 B:84-100,155-159,159-174,177-189 1mwr d1mwrb2 B:159-174,211-218,221-232,233-244 1rp5 d1rp5a3 A:84-101,155-159,159-174,177-189 1k25 d1k25b3 B:1084-1099,1155-1159,1159-1174,1177-1189 1k25 d1k25d3 D:3084-3099,3155-3159,3159-3174,3177-3189 223. b.8.1 TRAF domain-like has a circularly permuted immunoglobulin-fold topology with extra strand ! TRAF domain-like sandwich; 8 strands in 2 sheets; greek-key 2an6 d2an6d1 D:221-230,231-239,260-268,271-281 1k2f d1k2fb_ B:221-230,231-239,260-268,271-281 1l0a d1l0aa1 A:428-438,440-450,475-483,488-497 1k2f d1k2fa_ A:221-230,231-240,260-268,271-281 2an6 d2an6a1 A:221-230,231-240,260-268,271-281 2an6 d2an6c1 C:221-230,231-239,260-268,271-281 2an6 d2an6b1 B:221-230,231-239,260-269,271-281 1d01 d1d01f1 F:428-436,441-449,474-481,488-497 1d01 d1d01e1 E:428-436,441-449,474-481,488-497 1d01 d1d01d1 D:428-436,441-449,474-481,488-497 1czy d1czyc1 C:428-436,441-449,474-481,488-497 1flk d1flka1 A:429-436,442-449,475-483,488-497 1czy d1czyb1 B:428-436,441-449,474-481,488-497 1d01 d1d01a1 A:428-436,441-449,474-481,488-497 1czy d1czya1 A:428-436,441-449,474-481,488-497 1d01 d1d01b1 B:428-436,441-449,474-481,488-497 1d01 d1d01c1 C:428-436,441-449,474-481,488-498 1kzz d1kzza1 A:429-436,442-449,475-483,488-497 1d0a d1d0af1 F:428-436,441-449,474-481,488-497 1ca4 d1ca4d1 D:428-436,441-449,474-481,488-497 1d0a d1d0ad1 D:428-436,441-449,474-481,488-497 1d0a d1d0ac1 C:428-436,441-449,474-481,488-497 1ca4 d1ca4b1 B:428-436,441-449,474-481,488-497 1d0a d1d0ae1 E:428-436,441-449,474-481,488-497 1d0a d1d0ab1 B:428-436,441-449,474-481,488-497 1d00 d1d00e1 E:428-436,441-449,474-482,488-497 1d00 d1d00c1 C:428-436,441-449,474-482,488-497 1d0a d1d0aa1 A:428-436,441-449,474-481,488-497 1d00 d1d00a1 A:428-436,441-449,474-482,488-497 1ca4 d1ca4e1 E:428-436,441-449,474-481,488-498 1d00 d1d00b1 B:428-436,441-449,474-482,488-497 1ca4 d1ca4f1 F:428-436,441-449,474-481,488-498 1ca4 d1ca4a1 A:428-436,441-449,474-481,488-498 1ca4 d1ca4c1 C:428-436,441-449,474-481,488-498 1d00 d1d00f1 F:428-436,441-449,474-482,488-497 1d00 d1d00h1 H:428-436,441-449,474-482,488-497 1d00 d1d00g1 G:428-436,441-449,474-482,488-497 1czz d1czzb1 B:428-436,441-449,474-481,488-497 1czz d1czzc1 C:428-436,441-449,474-481,488-497 1czz d1czza1 A:428-436,441-449,474-481,488-497 1d00 d1d00d1 D:428-436,441-449,474-481,488-497 1d0j d1d0jd1 D:428-436,441-449,474-481,488-497 1d0j d1d0jb1 B:428-436,441-449,474-481,488-497 1d0j d1d0jf1 F:428-436,441-449,474-481,488-497 1d0j d1d0ja1 A:428-436,441-449,474-481,488-497 1d0j d1d0jc1 C:428-436,441-449,474-481,488-498 2cr2 d2cr2a1 A:77-89,91-98,118-125,133-146 1ca9 d1ca9e1 E:428-436,441-449,474-482,488-497 1ca9 d1ca9b1 B:428-436,441-449,474-481,488-497 1ca9 d1ca9a1 A:428-436,441-449,474-481,488-497 1ca9 d1ca9f1 F:428-436,441-449,474-481,488-497 224. b.138.1 Hydrophobin II, HfbII Hydrophobin II, HfbII core: barrel, closed; n=4, S=8; complex topology; helix-containing crossover connection 2pl7 d2pl7b1 B:9-16,24-28,35-47,48-54 2pl7 d2pl7a1 A:9-16,24-28,35-47,48-54 2b97 d2b97b1 B:9-16,24-28,35-47,48-54 1r2m d1r2mb_ B:9-16,24-28,35-47,48-54 2b97 d2b97a1 A:9-16,24-28,35-47,48-54 1r2m d1r2ma_ A:9-16,24-28,35-47,48-54 2pl6 d2pl6h1 H:9-16,24-28,35-47,48-54 2pl6 d2pl6e1 E:9-16,24-28,35-47,48-54 2pl6 d2pl6b1 B:9-16,24-28,35-47,48-54 2pl6 d2pl6g1 G:9-16,24-28,35-47,48-54 2pl6 d2pl6c1 C:9-16,24-28,35-47,48-54 2pl6 d2pl6a1 A:9-16,24-28,35-47,48-54 2pl6 d2pl6d1 D:9-16,24-28,35-47,48-54 2pl6 d2pl6f1 F:9-16,24-28,35-47,48-54 226. b.31.1 EV matrix protein EV matrix protein consists of two beta-sandwich domains of similar topologies 1h2d d1h2db_ B:70-83,87-102,107-119,172-186 1h2d d1h2da_ A:70-83,87-102,107-119,172-186 1h2c d1h2ca_ A:70-83,87-102,107-118,172-186 1es6 d1es6a1 A:70-84,85-102,107-118,172-186 228. e.2.1 Replication terminator protein (Tus) Replication terminator protein (Tus) contains a cluster of helices and a beta-sandwich 2ewj d2ewja1 A:32-41,58-63,62-76,93-103 2i05 d2i05a1 A:32-41,58-63,62-77,93-103 1ecr d1ecra_ A:32-41,58-63,62-77,93-102 2i06 d2i06a1 A:32-41,58-63,62-77,94-103 229. d.276.1 Hypothetical protein yfbM Hypothetical protein yfbM beta-alpha(2)-beta-alpha(2)-beta(2)-alpha(n)-beta; 3 layers: a/b/a; antiparallel beta-sheet, order: 21543 1ryl d1rylb_ B:4-11,38-43,129-158,159-166 1ryl d1ryla_ A:4-11,38-43,129-158,159-166 1ryl d1rylb_ B:4-11,38-43,65-73,159-166 1ryl d1ryla_ A:4-11,38-43,65-73,159-166 234. d.58.15 Ribosomal protein S10 Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2i2u d2i2uj1 J:6-13,69-77,80-91,96-102 1i94 d1i94j_ J:3-11,61-75,78-88,94-100 1i95 d1i95j_ J:3-11,61-75,78-88,94-100 2v48 d2v48j1 J:3-11,59-76,78-89,94-100 2v46 d2v46j1 J:3-11,59-76,78-89,94-100 1vs7 d1vs7j1 J:5-13,61-77,80-91,96-102 2qbb d2qbbj1 J:5-13,63-78,80-91,96-102 2z4m d2z4mj1 J:5-13,63-80,80-91,96-102 2j00 d2j00j1 J:3-11,60-76,78-89,94-100 2z4k d2z4kj1 J:5-13,63-80,80-91,96-102 2j02 d2j02j1 J:3-11,60-76,78-89,94-100 2aw7 d2aw7j1 J:5-13,61-77,80-91,96-102 2vhp d2vhpj1 J:5-13,61-77,80-91,96-102 2qbj d2qbjj1 J:5-13,63-80,80-91,96-102 2qb9 d2qb9j1 J:5-13,63-80,80-91,96-102 2qbh d2qbhj1 J:5-13,63-80,80-91,96-102 1hr0 d1hr0j_ J:3-11,59-75,78-89,94-100 2qow d2qowj1 J:5-13,63-78,80-91,96-102 1fjg d1fjgj_ J:3-11,59-75,78-89,94-100 3df3 d3df3j1 J:5-13,61-78,80-91,96-102 2i2p d2i2pj1 J:5-13,61-77,80-91,96-101 1i97 d1i97j_ J:3-11,59-75,78-88,94-100 2qbf d2qbfj1 J:5-13,61-78,80-91,96-102 2qbd d2qbdj1 J:5-13,61-78,80-91,96-102 2qp0 d2qp0j1 J:5-13,61-77,80-91,96-102 1yl4 d1yl4m1 M:3-11,59-75,78-89,94-100 3df1 d3df1j1 J:5-13,61-80,80-91,96-102 1i96 d1i96j_ J:3-11,59-75,78-88,94-100 1hnx d1hnxj_ J:3-11,59-75,78-89,94-100 1hnz d1hnzj_ J:3-11,59-75,78-89,94-100 2b64 d2b64j1 J:3-11,59-75,78-89,94-100 2b9o d2b9oj1 J:3-11,59-75,78-89,94-100 2b9m d2b9mj1 J:3-11,59-75,78-89,94-100 2hgp d2hgpm1 M:3-11,59-75,78-89,93-100 2e5l d2e5lj1 J:3-11,59-75,78-88,94-100 1xnq d1xnqj_ J:3-11,59-75,78-88,93-100 1xmo d1xmoj_ J:3-11,59-75,78-88,94-100 2qan d2qanj1 J:5-13,61-80,80-91,96-102 2qal d2qalj1 J:5-13,61-80,80-91,96-102 2hgi d2hgim1 M:3-11,59-76,78-89,93-100 2hgr d2hgrm1 M:3-11,59-76,78-89,93-100 2qou d2qouj1 J:5-13,61-78,80-91,96-102 1j5e d1j5ej_ J:4-11,59-74,78-88,94-100 2uxd d2uxdj1 J:3-11,59-75,78-88,94-100 1vs5 d1vs5j1 J:6-13,61-78,80-91,96-102 1hnw d1hnwj_ J:4-11,59-74,78-89,94-99 2avy d2avyj1 J:6-13,61-78,80-91,96-102 2hhh d2hhhj1 J:4-11,59-74,78-88,94-100 2f4v d2f4vj1 J:4-11,59-75,78-89,94-100 2qoy d2qoyj1 J:6-13,61-74,80-91,96-102 238. a.223.1 Triger factor/SurA peptide-binding domain-like there are sequence and functional similarities between the families, but their structural similarity is obscured by conformational flexibility (in the TF family) ! Triger factor/SurA peptide-binding domain-like multihelical; irregular array of long and short helices 2pv3 d2pv3b1 B:28-33,34-38,62-88,422-426 1m5y d1m5ya1 A:28-33,34-38,62-88,422-426 1m5y d1m5yd1 D:28-33,34-38,62-88,422-426 1m5y d1m5yc1 C:28-33,34-38,62-88,422-426 1m5y d1m5yb1 B:28-33,34-38,62-88,422-426 2pv3 d2pv3a1 A:28-33,34-38,62-88,422-426 240. e.5.1 Heme-dependent catalase-like Heme-dependent catalase-like contains an (8,10) beta-barrel and an all-alpha domain 1ggj d1ggjc2 C:130-141,159-169,316-329,367-378 1ggj d1ggjd2 D:130-141,159-169,316-329,367-378 1gge d1ggeb2 B:130-141,159-169,316-329,367-378 1gg9 d1gg9c2 C:130-141,159-169,316-329,367-378 1ggj d1ggjb2 B:130-141,159-169,316-329,367-378 1p7y d1p7yb2 B:130-141,159-169,316-329,367-378 1gge d1ggec2 C:130-141,159-169,316-329,367-378 1ggf d1ggfb2 B:130-141,159-169,316-329,367-378 1cf9 d1cf9c2 C:130-141,159-169,316-329,367-378 1gg9 d1gg9b2 B:130-141,159-169,316-329,367-378 1gg9 d1gg9d2 D:130-141,159-169,316-329,367-378 1ggh d1gghb2 B:130-141,159-169,316-329,367-378 1cf9 d1cf9d2 D:130-141,159-169,316-329,367-378 1e93 d1e93a_ A:56-68,82-95,238-251,289-300 1ggh d1gghc2 C:130-141,159-169,316-329,367-378 1p7z d1p7zb2 B:130-141,159-169,316-329,367-378 1dgg d1dgga_ A:77-89,103-116,259-272,310-321 1tgu d1tgua1 A:76-88,102-115,258-271,309-320 1p81 d1p81b2 B:130-141,159-169,316-329,367-378 1cf9 d1cf9b2 B:130-141,159-169,316-329,367-378 1gge d1gged2 D:130-141,159-169,316-329,367-378 1gg9 d1gg9a2 A:130-141,159-169,316-329,367-378 1cf9 d1cf9a2 A:130-141,159-169,316-329,367-378 1dgf d1dgfc_ C:77-89,103-116,259-272,310-321 1qws d1qwsb2 B:130-141,159-169,316-329,367-378 1f4j d1f4jb_ B:77-89,103-116,259-272,310-321 1qws d1qwsc2 C:130-141,159-169,316-329,367-378 1qws d1qwsa2 A:130-141,159-169,316-329,367-378 1p7z d1p7zc2 C:130-141,159-169,316-329,367-378 1p81 d1p81c2 C:130-141,159-169,316-329,367-378 1dgh d1dghc_ C:77-89,103-116,259-272,310-321 1dgg d1dggd_ D:77-89,103-116,259-272,310-321 1qws d1qwsd2 D:130-141,159-169,316-329,367-378 1ggh d1gghd2 D:130-141,159-169,316-329,367-378 1dgf d1dgfa_ A:77-89,103-116,259-272,310-321 1dgg d1dggb_ B:77-89,103-116,259-272,310-321 1qf7 d1qf7b2 B:130-141,159-169,316-329,367-378 8cat d8cata_ A:76-88,103-115,258-271,309-320 1m85 d1m85a_ A:56-68,82-95,238-251,289-300 1dgf d1dgfd_ D:77-89,103-116,259-272,310-321 1p81 d1p81d2 D:130-141,159-169,316-329,367-378 1dgf d1dgfb_ B:77-89,103-116,259-272,310-321 1ggf d1ggfc2 C:130-141,159-169,316-329,367-378 7cat d7catb_ B:76-88,102-115,258-271,309-320 7cat d7cata_ A:76-88,102-115,258-271,309-320 1gge d1ggea2 A:130-141,159-169,316-329,367-378 1dgg d1dggc_ C:77-89,103-116,259-272,310-321 1p80 d1p80c2 C:130-141,159-169,316-329,367-378 1th2 d1th2a1 A:76-88,102-115,258-271,309-320 1dgh d1dghb_ B:77-89,103-116,259-272,310-321 1ggj d1ggja2 A:130-141,159-169,316-329,367-378 1qf7 d1qf7c2 C:130-141,159-169,316-329,367-378 1p7y d1p7yd2 D:130-141,159-169,316-329,367-378 1ggf d1ggfd2 D:130-141,159-169,316-329,367-378 4blc d4blcc_ C:76-88,102-115,258-271,309-320 1p7z d1p7zd2 D:130-141,159-169,316-329,367-378 1th2 d1th2b1 B:76-88,102-115,258-271,309-320 1ggh d1ggha2 A:130-141,159-169,316-329,367-378 2cag d2caga_ A:56-68,82-95,238-251,289-300 1p80 d1p80d2 D:130-141,159-169,316-329,367-378 1p80 d1p80b2 B:130-141,159-169,316-329,367-378 1ggf d1ggfa2 A:130-141,159-169,316-329,367-378 1th3 d1th3a1 A:76-88,102-115,258-271,309-320 1qf7 d1qf7d2 D:130-141,159-169,316-329,367-378 1tgu d1tgud1 D:76-88,102-115,258-271,309-320 1p81 d1p81a2 A:130-141,159-169,316-329,367-378 1mqf d1mqfa_ A:56-68,82-95,238-251,289-300 1f4j d1f4jc_ C:77-89,103-116,259-272,310-321 1h6n d1h6na_ A:56-68,82-95,238-251,289-300 1p7y d1p7yc2 C:130-141,159-169,316-329,367-378 1th3 d1th3d1 D:76-88,102-115,258-271,309-320 1qf7 d1qf7a2 A:130-141,159-169,316-329,367-378 1p7y d1p7ya2 A:130-141,159-169,316-329,367-378 1p7z d1p7za2 A:130-141,159-169,316-329,367-378 1nm0 d1nm0a_ A:56-68,82-95,238-251,289-300 1dgh d1dghd_ D:77-89,104-116,259-272,310-321 1tgu d1tguc1 C:76-88,102-115,258-271,309-320 1dgb d1dgbd_ D:77-89,103-116,259-272,310-321 1ggk d1ggkd2 D:130-141,159-169,316-329,367-378 1iph d1iphc2 C:130-141,159-169,316-329,367-378 1iph d1ipha2 A:130-141,159-169,316-329,367-378 1iph d1iphb2 B:130-141,159-169,316-329,367-378 1iph d1iphd2 D:130-141,159-169,316-329,367-378 1f4j d1f4ja_ A:77-88,103-116,259-272,310-321 1qwl d1qwla_ A:58-70,84-97,240-253,291-302 1p80 d1p80a2 A:130-141,159-169,316-329,367-378 1dgb d1dgbb_ B:77-89,103-116,259-272,310-321 1ggk d1ggka2 A:130-141,159-169,316-329,367-378 1th2 d1th2c1 C:76-88,102-115,258-271,309-320 1a4e d1a4eb_ B:72-84,98-111,256-269,307-318 1gwe d1gwea_ A:63-75,89-101,244-257,295-306 1dgb d1dgba_ A:77-88,103-116,259-272,310-321 2a9e d2a9eb1 B:58-69,84-97,240-253,291-302 2iqf d2iqfb1 B:58-69,84-97,240-253,291-302 1dgb d1dgbc_ C:77-89,103-116,259-272,310-321 2cah d2caha_ A:56-68,82-95,238-251,289-300 1gwh d1gwha_ A:63-75,89-101,244-257,295-306 1hbz d1hbza_ A:63-75,89-101,244-257,295-306 1qqw d1qqwd_ D:77-89,103-116,259-272,310-321 1gwf d1gwfa_ A:63-75,89-101,244-257,295-306 1th3 d1th3c1 C:76-88,102-115,258-271,309-320 1ggk d1ggkb2 B:130-141,159-169,316-329,367-378 1ggk d1ggkc2 C:130-141,159-169,316-329,367-378 4blc d4blca_ A:76-88,103-115,258-271,309-320 1qwm d1qwmb_ B:58-69,84-97,240-253,291-302 2a9e d2a9ea1 A:58-69,84-97,240-253,291-302 1th2 d1th2d1 D:76-88,104-115,258-271,309-320 2iqf d2iqfa1 A:58-69,84-97,240-253,291-302 1qwm d1qwma_ A:58-69,84-97,240-253,291-302 1m7s d1m7sb_ B:80-91,105-118,261-274,310-321 1qqw d1qqwa_ A:77-89,105-116,259-272,310-321 1m7s d1m7sa_ A:80-91,105-118,261-274,310-321 1m7s d1m7sd_ D:80-91,105-118,261-274,310-321 1tgu d1tgub1 B:76-87,104-115,258-271,309-320 1qwl d1qwlb_ B:58-69,84-97,240-253,291-302 4blc d4blcd_ D:76-88,103-115,258-271,309-320 1m7s d1m7sc_ C:80-91,105-118,261-274,310-321 1qqw d1qqwc_ C:77-89,105-116,259-272,310-321 1a4e d1a4ea_ A:72-84,100-111,256-269,307-318 1f4j d1f4jd_ D:77-89,104-116,259-272,310-322 1a4e d1a4ec_ C:72-84,100-111,256-269,307-318 4blc d4blcb_ B:76-87,102-115,258-271,309-320 1th3 d1th3b1 B:76-87,104-115,258-271,309-320 1th4 d1th4c1 C:76-87,102-115,258-271,309-320 1u5u d1u5ua_ A:69-80,93-107,252-265,300-311 1si8 d1si8d_ D:56-70,82-95,238-251,289-300 1si8 d1si8b_ B:56-70,82-95,238-251,289-300 1si8 d1si8c_ C:56-70,82-95,238-251,289-300 1si8 d1si8a_ A:56-70,82-95,238-251,289-300 1th4 d1th4b1 B:78-88,102-115,258-271,309-320 242. c.8.3 Carbamoyl phosphate synthetase, small subunit N-terminal domain The "swivelling" beta/beta/alpha domain 3 layers: b/b/a; the central sheet is parallel, and the other one is antiparallel; there are some variations in topology ! this domain is thought to be mobile in most multi-domain proteins known to contain it 1jdb d1jdbf1 F:3-10,12-21,114-126,128-135 1jdb d1jdbc1 C:3-10,12-21,114-126,128-135 1c30 d1c30f1 F:3-10,12-21,114-126,128-135 1jdb d1jdbl1 L:3-10,12-21,114-126,128-135 1jdb d1jdbi1 I:3-10,12-21,114-126,128-135 1kee d1keeh1 H:3-10,12-21,114-126,128-135 1a9x d1a9xd1 D:3503-3510,3512-3521,3614-3626,3628-3635 1cs0 d1cs0f1 F:3-10,12-21,114-126,128-135 1kee d1keed1 D:3-10,12-21,114-126,128-135 1cs0 d1cs0d1 D:3-10,12-21,114-126,128-135 1bxr d1bxrh1 H:3-10,12-21,114-126,128-135 1t36 d1t36f1 F:3-10,12-21,114-126,128-135 1c3o d1c3of1 F:3-10,12-21,114-126,128-135 1a9x d1a9xf1 F:5503-5510,5512-5521,5614-5626,5628-5635 1c30 d1c30d1 D:3-10,12-21,114-126,128-135 1t36 d1t36d1 D:3-10,12-21,114-126,128-135 1bxr d1bxrf1 F:3-10,12-21,114-126,128-135 1a9x d1a9xh1 H:7503-7510,7512-7521,7614-7626,7628-7635 1m6v d1m6vf1 F:3-10,12-21,114-126,128-135 1t36 d1t36b1 B:3-10,12-21,114-126,128-135 1bxr d1bxrb1 B:3-10,12-21,114-126,128-135 1cs0 d1cs0h1 H:3-10,12-21,114-126,128-135 1cs0 d1cs0b1 B:3-10,12-21,114-126,128-135 1c3o d1c3ob1 B:3-10,12-21,114-126,128-135 1ce8 d1ce8b1 B:3-10,12-21,114-126,128-135 1c3o d1c3od1 D:3-10,12-21,114-126,128-135 1m6v d1m6vd1 D:3-10,12-21,114-126,127-135 1bxr d1bxrd1 D:3-10,12-21,114-126,128-135 1c30 d1c30h1 H:3-10,12-21,114-126,128-135 1ce8 d1ce8h1 H:3-10,12-21,114-126,127-135 1m6v d1m6vh1 H:3-10,12-21,114-126,127-135 1m6v d1m6vb1 B:3-10,12-21,114-126,128-135 1ce8 d1ce8d1 D:3-10,12-21,114-126,127-135 1ce8 d1ce8f1 F:3-10,12-18,114-126,128-135 1t36 d1t36h1 H:3-10,12-18,114-126,128-135 1kee d1keeb1 B:3-10,12-18,114-126,128-135 1a9x d1a9xb1 B:1503-1510,1512-1518,1614-1626,1628-1635 1kee d1keef1 F:3-10,12-18,114-126,128-135 1c3o d1c3oh1 H:3-10,12-18,114-126,128-135 1c30 d1c30b1 B:3-10,12-18,114-126,127-135 243. b.43.2 FucI/AraA C-terminal domain-like Reductase/isomerase/elongation factor common domain barrel, closed; n=6, S=10; greek-key 2hxg d2hxgb1 B:389-400,401-413,434-446,449-456 2ajt d2ajtb1 B:389-400,401-413,434-446,449-456 2ajt d2ajta1 A:389-400,401-413,434-446,449-456 2hxg d2hxgc1 C:388-400,401-413,434-446,449-456 2hxg d2hxga1 A:388-400,401-413,434-446,449-456 2ajt d2ajtc1 C:389-400,401-413,434-446,449-456 1fui d1fuid1 D:454-466,470-482,516-524,527-534 1fui d1fuie1 E:454-467,469-481,516-524,527-534 1fui d1fuib1 B:455-467,469-481,516-524,527-534 1fui d1fuia1 A:454-467,469-482,516-524,527-534 1fui d1fuic1 C:454-467,469-482,516-524,527-534 1fui d1fuif1 F:454-467,469-482,516-524,527-534 244. b.129.1 AbrB/MazE/MraZ-like members of this superfamily are known or predicted to have DNA-binding function ! Double-split beta-barrel pseudobarrel; capped on both ends by alpha-helices 1n0g d1n0gb_ B:53-61,63-69,69-84,101-106 1n0g d1n0ga_ A:53-61,63-69,69-84,101-106 1n0e d1n0ec_ C:53-61,63-69,69-84,101-106 1n0e d1n0ef_ F:53-61,63-69,69-84,101-106 1n0e d1n0eh_ H:53-61,63-69,69-84,101-106 1n0e d1n0ed_ D:53-61,63-69,69-84,101-106 1n0e d1n0eg_ G:53-61,63-69,69-84,101-106 1n0e d1n0eb_ B:53-61,63-69,69-84,101-106 1n0e d1n0ee_ E:53-61,63-69,69-84,101-106 1n0e d1n0ea_ A:53-61,63-69,69-84,101-106 1n0f d1n0fh_ H:53-61,63-69,69-84,101-106 1n0f d1n0fa_ A:53-61,63-69,69-84,101-106 1n0f d1n0fe_ E:53-61,63-69,69-84,101-106 1n0f d1n0fb_ B:53-61,63-69,69-84,101-106 1n0f d1n0fc_ C:53-61,63-69,69-84,101-106 1n0f d1n0fd_ D:53-61,63-69,69-84,101-106 1n0f d1n0ff_ F:53-61,63-69,69-84,101-106 1n0f d1n0fg_ G:53-61,63-69,69-84,102-106 245. d.129.10 YwmB-like duplication: tandem repeat of two circularly permuted motifs, alpha-beta-alpha-beta(4), assembled as in the TATA-box binding domain; forms a swapped dimer by exchanging the equivalent parts of the C-terminal motifs ! TBP-like beta-alpha-beta(4)-alpha 2fpn d2fpna1 A:16-31,89-100,105-122,127-135 246. d.58.33 Formylmethanofuran:tetrahydromethanopterin formyltransferase duplication: contains two subdomains of this fold ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2fhj d2fhjd1 D:12-28,69-80,81-100,102-108 1ftr d1ftrd1 D:12-28,69-80,81-100,102-108 2fhj d2fhjc1 C:12-28,69-80,81-101,102-108 2fhk d2fhka1 A:12-28,69-80,81-101,102-108 2fhk d2fhkb1 B:12-28,69-80,81-101,102-108 2fhk d2fhkd1 D:12-28,69-80,81-101,102-108 2fhk d2fhkc1 C:12-28,69-80,81-101,102-108 2fhj d2fhja1 A:11-28,69-80,81-100,102-108 1m5h d1m5hf2 F:5157-5171,5242-5252,5253-5272,5273-5279 1ftr d1ftrb1 B:11-28,69-80,81-101,102-108 1ftr d1ftra1 A:11-28,69-80,81-101,102-108 1ftr d1ftrc1 C:11-28,69-80,81-101,102-108 2fhj d2fhjb1 B:11-28,69-80,81-101,102-108 1m5s d1m5sb1 B:1011-1028,1068-1079,1080-1099,1101-1106 1m5s d1m5sa2 A:154-171,242-252,253-272,273-279 1m5s d1m5sd2 D:3154-3171,3242-3252,3253-3272,3273-3279 1m5h d1m5hc1 C:2011-2028,2068-2079,2080-2099,2101-2106 1m5h d1m5ha1 A:11-28,68-79,80-99,101-106 1m5s d1m5sa1 A:11-28,68-79,80-99,101-106 1m5h d1m5he1 E:4011-4028,4068-4079,4080-4099,4101-4106 1m5h d1m5hh1 H:7011-7028,7068-7079,7080-7099,7101-7106 1m5h d1m5hb1 B:1011-1028,1068-1079,1080-1099,1101-1106 1m5s d1m5sd1 D:3011-3028,3068-3079,3080-3099,3101-3106 1m5s d1m5sb2 B:1154-1171,1242-1252,1253-1272,1273-1279 1m5h d1m5hf1 F:5011-5028,5068-5079,5080-5099,5101-5107 1m5s d1m5sc2 C:2154-2171,2242-2252,2253-2272,2273-2279 1m5h d1m5hg1 G:6011-6028,6068-6079,6080-6099,6101-6106 1ftr d1ftrb2 B:157-174,241-251,252-271,272-278 1m5s d1m5sc1 C:2011-2028,2068-2079,2080-2100,2101-2106 2fhj d2fhjb2 B:157-174,241-251,252-271,272-278 1ftr d1ftrd2 D:157-174,241-251,252-271,272-278 2fhj d2fhja2 A:157-174,241-251,252-271,272-278 1ftr d1ftrc2 C:157-174,241-251,252-271,272-278 1m5h d1m5hc2 C:2154-2171,2242-2252,2253-2272,2273-2279 1m5h d1m5hh2 H:7154-7171,7242-7252,7253-7272,7273-7279 2fhk d2fhka2 A:157-174,241-251,252-271,272-279 2fhk d2fhkb2 B:157-174,241-251,252-271,272-279 1ftr d1ftra2 A:157-174,241-251,252-271,272-278 1m5h d1m5hg2 G:6154-6171,6242-6252,6253-6272,6273-6279 1m5h d1m5hd2 D:3154-3171,3242-3252,3253-3272,3273-3279 2fhk d2fhkc2 C:157-174,241-251,252-271,272-279 1m5h d1m5he2 E:4154-4171,4242-4252,4253-4272,4273-4279 2fhk d2fhkd2 D:157-174,241-251,252-271,272-279 2fhj d2fhjd2 D:157-174,241-251,252-271,272-279 2fhj d2fhjc2 C:157-174,241-251,252-271,272-279 1m5h d1m5hb2 B:1154-1171,1242-1252,1253-1272,1273-1279 1m5h d1m5ha2 A:154-171,242-252,253-272,273-279 1m5h d1m5hd1 D:3010-3028,3068-3079,3080-3099,3101-3106 1m5h d1m5hd1 D:3010-3028,3068-3079,3080-3099,3154-3171 1m5h d1m5hf1 F:5011-5028,5068-5079,5080-5099,5157-5171 2fhj d2fhjd1 D:12-28,69-80,81-100,157-174 1m5h d1m5hg1 G:6011-6028,6068-6079,6080-6099,6154-6171 1m5s d1m5sb1 B:1011-1028,1068-1079,1080-1099,1154-1171 1m5h d1m5hb1 B:1011-1028,1068-1079,1080-1099,1154-1171 1ftr d1ftrd1 D:12-28,69-80,81-100,157-174 1m5s d1m5sa1 A:11-28,68-79,80-99,154-171 2fhj d2fhjc1 C:12-28,69-80,81-101,157-174 1m5s d1m5sd1 D:3011-3028,3068-3079,3080-3099,3154-3171 2fhk d2fhkb1 B:12-28,69-80,81-101,157-174 2fhk d2fhka1 A:12-28,69-80,81-101,157-174 1m5h d1m5ha1 A:11-28,68-79,80-99,154-171 2fhk d2fhkc1 C:12-28,69-80,81-101,157-174 1m5h d1m5he1 E:4011-4028,4068-4079,4080-4099,4154-4171 2fhk d2fhkd1 D:12-28,69-80,81-101,157-174 1m5h d1m5hh1 H:7011-7028,7068-7079,7080-7099,7154-7171 1m5s d1m5sc1 C:2011-2028,2068-2079,2080-2100,2154-2171 1m5h d1m5hc1 C:2011-2028,2068-2079,2080-2099,2154-2171 2fhj d2fhja1 A:11-28,69-80,81-100,157-174 2fhj d2fhjb1 B:11-28,69-80,81-101,157-174 1ftr d1ftrb1 B:11-28,69-80,81-101,157-174 1ftr d1ftra1 A:11-28,69-80,81-101,157-174 1ftr d1ftrc1 C:11-28,69-80,81-101,157-174 251. g.29.1 Type X cellulose binding domain, CBDX Type X cellulose binding domain, CBDX disulfide-rich, alpha+beta 1e8r d1e8ra_ A:23-28,29-36,53-60,63-67 1qld d1qlda_ A:23-28,29-36,53-60,63-67 252. d.58.57 Transposase IS200-like contains extra N-terminal hairpin and C-terminal helix, both are involved in dimerization; there can be helix-swapping in the dimer ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2vju d2vjua1 A:17-25,63-71,76-97,110-116 2vju d2vjub1 B:17-25,63-71,76-97,110-116 2f4f d2f4fb1 B:13-21,59-67,72-93,104-110 2f4f d2f4fa1 A:13-20,59-67,72-93,104-110 2f5g d2f5ga1 A:13-22,59-67,72-93,104-110 2vic d2vica1 A:17-25,63-71,76-97,110-116 2vjv d2vjva1 A:17-25,63-71,76-97,110-116 2f5g d2f5gb1 B:13-22,59-67,72-93,104-110 2vjv d2vjvb1 B:17-25,63-71,76-97,110-116 2vic d2vicb1 B:17-25,63-71,76-97,110-116 2vih d2vihb1 B:17-25,63-71,76-97,110-116 2a6m d2a6ma1 A:17-25,63-71,76-97,109-116 2vhg d2vhgb1 B:17-24,63-71,76-97,110-116 2vhg d2vhga1 A:17-24,63-71,76-97,110-116 2a6o d2a6oa1 A:17-25,63-71,76-97,110-116 2a6o d2a6ob1 B:17-25,63-71,76-97,110-116 2vih d2viha1 A:17-25,63-71,76-97,110-116 2a6m d2a6mb1 B:17-25,63-72,76-97,110-116 2fyx d2fyxb1 B:11-20,57-65,70-91,106-111 2fyx d2fyxa1 A:11-20,57-65,70-91,106-111 254. d.168.1 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain unusual fold 2bs4 d2bs4d3 D:259-263,264-268,342-354,361-372 2bs4 d2bs4a3 A:259-263,264-268,342-354,361-372 2bs2 d2bs2a3 A:259-263,264-268,342-354,361-372 2bs2 d2bs2d3 D:259-263,264-268,342-354,361-372 2bs3 d2bs3a3 A:259-263,264-268,342-354,361-372 2bs3 d2bs3d3 D:259-263,264-268,342-354,361-372 1qlb d1qlba3 A:259-263,264-268,343-354,361-372 1qlb d1qlbd3 D:259-263,264-268,343-354,361-372 2b76 d2b76a3 A:234-238,239-243,328-340,347-358 1l0v d1l0vm3 M:234-238,239-243,328-340,347-358 1y0p d1y0pa3 A:366-371,372-376,429-439,493-507 2b7r d2b7ra3 A:366-371,372-376,429-439,493-507 2b76 d2b76m3 M:230-238,239-243,328-340,347-356 1jrx d1jrxb3 B:361-371,372-376,377-384,493-507 1jrx d1jrxa3 A:361-371,372-376,377-384,493-507 1e39 d1e39a3 A:361-371,372-376,377-384,493-507 1q9i d1q9ia3 A:361-371,372-376,377-384,493-507 1p2h d1p2ha3 A:361-371,372-376,377-384,493-507 1jry d1jrya3 A:361-371,372-376,377-384,493-507 1ksu d1ksub3 B:361-371,372-376,377-384,493-507 1qjd d1qjda3 A:361-371,372-376,377-384,493-507 1ksu d1ksua3 A:361-371,372-376,377-384,493-507 1p2e d1p2ea3 A:361-371,372-376,377-384,493-507 2b7s d2b7sa3 A:361-371,372-376,429-439,493-507 1jry d1jryb3 B:361-371,372-376,377-384,493-507 1jrx d1jrxb3 B:361-371,372-376,429-439,493-507 2b7s d2b7sa3 A:361-371,372-376,377-384,493-507 1kss d1kssa3 A:361-371,372-376,377-384,493-507 1jrz d1jrza3 A:361-371,372-376,377-384,493-507 1ksu d1ksua3 A:361-371,372-376,429-439,493-507 1jrx d1jrxa3 A:361-371,372-376,429-439,493-507 1q9i d1q9ia3 A:361-371,372-376,429-439,493-507 1e39 d1e39a3 A:361-371,372-376,429-439,493-507 1lj1 d1lj1a3 A:361-371,372-376,377-384,493-507 1ksu d1ksub3 B:361-371,372-376,429-439,493-507 1qjd d1qjda3 A:361-371,372-376,429-439,493-507 1jry d1jryb3 B:361-371,372-376,429-439,493-507 1jry d1jrya3 A:361-371,372-376,429-439,493-507 1lj1 d1lj1a3 A:361-371,372-376,429-439,493-507 1jrz d1jrza3 A:361-371,372-376,429-439,493-507 1d4d d1d4da3 A:360-370,371-375,376-383,491-506 1d4e d1d4ea3 A:360-370,371-375,376-383,491-506 1p2h d1p2ha3 A:361-371,372-376,429-439,493-507 1p2e d1p2ea3 A:361-371,372-376,429-439,493-507 1kss d1kssa3 A:361-371,372-376,429-439,493-507 1d4d d1d4da3 A:360-370,371-375,428-438,491-506 1qo8 d1qo8a3 A:356-366,367-371,372-379,487-502 1d4e d1d4ea3 A:360-370,371-375,428-438,491-506 255. d.350.1 YcgL-like YcgL-like beta(2)-alpha-beta-alpha-beta; 3 layers: a/b/a; antiparallel beta-sheet, order:3124 2h7a d2h7aa1 A:14-22,26-32,41-49,50-59 257. d.172.1 gp120 core gp120 core unusual fold 2ny6 d2ny6a1 A:222-229,241-245,474-486,485-491 2ny7 d2ny7g1 G:222-229,241-245,474-486,485-491 1rzj d1rzjg_ G:222-229,241-246,474-486,485-491 2ny5 d2ny5g1 G:222-229,241-245,474-486,485-491 2ny0 d2ny0a1 A:222-229,241-245,474-486,485-491 2ny2 d2ny2a1 A:222-229,241-245,474-486,485-491 2ny1 d2ny1a1 A:222-229,241-245,474-486,485-491 1gc1 d1gc1g_ G:222-229,241-245,474-486,485-491 2ny3 d2ny3a1 A:222-229,241-245,474-486,485-491 2nxz d2nxza1 A:222-229,241-245,474-486,485-491 1yym d1yymg1 G:222-230,240-245,474-486,485-491 2ny4 d2ny4a1 A:222-229,241-245,474-486,485-491 2nxy d2nxya1 A:222-229,241-245,474-486,485-491 1yyl d1yylp1 P:1222-1229,1241-1245,1474-1486,1485-1491 258. b.120.1 Tp47 lipoprotein, N-terminal domain Tp47 lipoprotein, N-terminal domain complex fold; consists of two intertwined subdomains 1o75 d1o75b3 B:7-16,146-164,166-175,175-179 1o75 d1o75a3 A:7-16,146-164,166-175,175-179 260. a.171.1 BRCA2 tower domain BRCA2 tower domain multihelical; contains a 3-helical Hin recombinase-like subdomain and two long dimerisation helices 1iyj d1iyjb2 B:2751-2765,2767-2773,2773-2784,2894-2906 1iyj d1iyjd2 D:2751-2765,2767-2773,2773-2784,2894-2906 1mje d1mjea2 A:2742-2756,2758-2764,2764-2792,2885-2897 1miu d1miua2 A:2742-2755,2759-2764,2764-2795,2885-2897 261. d.238.1 Hypothetical protein TM0875 Hypothetical protein TM0875 unusual fold; core: beta(2)-loop-beta(2)-alpha-beta; mixed beta-sheet: order 51243; parallel strands 2 and 4 1o22 d1o22a_ A:6-14,43-54,124-141,146-154 262. d.58.50 Hypothetical protein TT1725 Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1j27 d1j27a_ A:1-16,51-62,63-82,84-98 263. c.83.1 Aconitase iron-sulfur domain Aconitase iron-sulfur domain consists of three similar domains with 3 layers (a/b/a) each; duplication ! core: parallel beta-sheet of 5 strands, order 32145 5acn d5acna2 A:320-325,330-334,333-345,458-464 6acn d6acna2 A:320-325,330-334,333-345,458-464 1c96 d1c96a2 A:320-325,330-334,333-345,458-464 1c97 d1c97a2 A:320-325,330-334,333-345,458-464 7acn d7acna2 A:320-325,330-334,333-345,458-464 8acn d8acna2 A:320-325,330-334,333-345,458-464 1aco d1acoa2 A:320-325,330-334,333-345,458-464 1fgh d1fgha2 A:320-325,330-334,333-345,458-464 1ami d1amia2 A:320-325,330-334,333-345,458-464 1amj d1amja2 A:320-325,330-334,333-345,458-464 1nis d1nisa2 A:320-325,330-334,333-345,458-464 1nit d1nita2 A:320-325,330-334,333-345,458-464 1b0m d1b0ma2 A:320-325,330-334,333-345,458-464 1b0k d1b0ka2 A:320-325,330-334,333-345,458-464 1b0j d1b0ja2 A:320-325,330-334,333-345,458-464 2b3y d2b3ya2 A:368-373,378-382,381-395,547-552 2b3y d2b3yb2 B:368-373,378-382,381-395,547-552 2b3x d2b3xa2 A:368-373,378-382,384-395,547-552 268. d.155.1 Pyruvoyl-dependent histidine and arginine decarboxylases two chains result from self-processing single-chain precursor; form heterohexamer ! Pyruvoyl-dependent histidine and arginine decarboxylases duplication of beta-alpha-beta(2) motif; 4 layers: alpha/beta/beta/alpha; contains "silk" beta-sandwich 1pya d1pya.1 B:174-186,192-203,206-233,235-248 1pya d1pya.3 F:174-186,192-203,206-233,235-248 1ibu d1ibu.1 B:174-186,192-203,206-233,235-248 1pya d1pya.2 D:174-186,192-203,206-233,235-248 1ibu d1ibu.3 F:174-186,192-203,206-233,235-248 1ibu d1ibu.2 D:174-186,192-203,206-233,235-248 1ibt d1ibt.3 F:174-186,192-203,206-233,235-248 1ibt d1ibt.1 B:174-186,192-203,206-233,235-248 1ibt d1ibt.2 D:174-186,192-203,206-233,235-248 1ibv d1ibv.1 B:174-186,192-203,206-233,235-248 1ibv d1ibv.2 D:174-186,192-203,206-233,235-248 1ibv d1ibv.3 F:174-186,192-203,206-233,235-248 1hq6 d1hq6.2 D:174-186,192-203,206-233,235-248 1hq6 d1hq6.1 B:174-186,192-203,206-233,235-248 1ibw d1ibw.2 D:174-186,192-203,206-233,235-248 1ibw d1ibw.1 B:174-186,192-203,206-233,235-248 1ibw d1ibw.3 F:174-186,192-203,206-233,235-248 1n2m d1n2mc_ C:86-99,103-114,115-135,137-152 1mt1 d1mt1.6 L:86-99,103-114,115-135,137-152 1n13 d1n13.2 D:86-99,103-114,115-135,137-152 1mt1 d1mt1.2 D:86-99,103-114,115-135,137-152 1n2m d1n2mb_ B:86-99,103-114,115-135,137-152 1n13 d1n13.1 B:86-99,103-114,115-135,137-152 1n13 d1n13.6 L:86-99,103-114,115-135,137-152 1mt1 d1mt1.1 B:86-99,103-114,115-135,137-152 1n2m d1n2md_ D:86-99,103-113,115-135,137-152 1n13 d1n13.4 H:86-99,103-114,115-135,137-152 1mt1 d1mt1.3 F:86-99,103-114,115-135,137-152 1n2m d1n2ma_ A:86-99,103-114,115-135,137-152 1n2m d1n2mf_ F:86-99,103-113,115-135,137-152 1mt1 d1mt1.5 J:86-99,103-114,115-135,137-152 1n13 d1n13.5 J:86-99,103-114,115-135,137-152 1mt1 d1mt1.4 H:86-99,103-114,115-135,137-152 1n2m d1n2me_ E:86-99,103-113,115-135,137-152 1n13 d1n13.3 F:86-99,102-114,115-135,137-152 269. d.282.1 SSo0622-like the dimer, formed in the crystals, is a probable biological unit ! SSo0622-like alpha(2)-beta(2)-alpha-beta-alpha-beta(2)-alpha; 2 layers: a/b; antiparallel beta-sheet: order 21354; strands 1,3 and 5 and the C-terminal helix are longer than other secondary structures 1tlj d1tljb_ B:51-60,68-75,79-90,93-109 1tlj d1tlja_ A:51-60,68-75,79-90,93-109 270. b.49.3 Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like barrel, closed; n=6, S=8; greek-key 1y0y d1y0ya1 A:99-107,111-119,147-155,160-165 1y0r d1y0ra1 A:99-107,111-119,147-155,160-165 1xfo d1xfob1 B:99-107,111-120,147-155,160-165 2gre d2grea1 A:100-109,111-120,151-159,162-169 2gre d2gren1 N:100-109,111-120,151-159,162-169 1xfo d1xfoa1 A:99-107,111-120,147-155,160-165 1xfo d1xfoc1 C:99-107,111-120,147-155,160-165 2gre d2greb1 B:100-109,111-120,151-159,162-169 1vhe d1vhea1 A:100-108,109-118,146-154,157-164 2gre d2greg1 G:101-109,111-120,151-159,162-169 2gre d2greh1 H:100-109,111-120,151-159,162-169 2gre d2grek1 K:101-109,111-120,151-159,162-169 2gre d2grec1 C:100-109,111-120,151-159,164-169 2gre d2greo1 O:100-109,111-120,151-159,164-169 2gre d2gred1 D:100-109,111-120,151-159,164-169 2gre d2grej1 J:100-109,111-120,151-159,164-169 2gre d2gref1 F:101-109,111-120,151-159,162-169 2gre d2gree1 E:100-109,111-120,151-159,164-169 2gre d2grei1 I:100-109,111-120,151-159,164-169 2gre d2grel1 L:100-109,111-120,151-159,164-169 2gre d2grem1 M:101-109,111-120,151-159,164-169 2gre d2grep1 P:101-109,111-120,151-159,164-169 1xfo d1xfod1 D:99-107,111-120,147-155,158-165 1ylo d1yloe1 E:93-102,104-117,131-139,142-149 1ylo d1yloc1 C:93-102,104-117,131-139,142-149 1ylo d1ylob1 B:93-102,104-117,131-139,142-149 1ylo d1ylof1 F:93-102,104-117,131-139,142-149 1ylo d1yloa1 A:93-102,104-117,131-139,142-149 1ylo d1ylod1 D:93-102,104-117,131-139,142-149 272. d.261.1 Hypothetical protein PH1602 Hypothetical protein PH1602 complex alpha+beta fold; contains a region of similarity to the ferredoxin-like fold 1uc2 d1uc2b_ B:97-106,227-237,275-312,320-328 1uc2 d1uc2a_ A:97-106,227-237,275-312,319-328 1uc2 d1uc2b_ B:203-207,227-237,439-447,476-481 279. d.58.21 Molybdenum cofactor biosynthesis protein C, MoaC Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1ekr d1ekra_ A:22-36,95-108,111-131,137-148 1eks d1eksa_ A:22-36,95-108,111-135,137-148 281. d.58.46 eEF1-gamma domain elaborated with additional structures ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1pbu d1pbua_ A:355-366,367-379,406-419,429-437 282. d.220.1 Metal cation-transporting ATPase, ATP-binding domain N Metal cation-transporting ATPase, ATP-binding domain N unusual fold; core: beta-alpha(2)-beta(3)-alpha(2)-beta(2); 6-stranded antiparallel beta-sheet, order: 165432 1q3i d1q3ia_ A:378-387,388-393,443-458,576-587 1iwo d1iwob3 B:361-374,375-386,439-453,591-601 1iwo d1iwoa3 A:361-374,375-386,439-453,591-601 3b9r d3b9ra3 A:361-374,375-386,439-453,591-601 2zbf d2zbfa3 A:361-374,375-386,439-453,591-601 2zbg d2zbga3 A:361-374,375-386,439-453,591-601 1wpg d1wpgb3 B:361-374,375-386,439-453,591-601 1wpg d1wpgc3 C:361-374,375-386,439-453,591-601 1wpg d1wpgd3 D:361-374,375-386,439-453,591-601 3b9b d3b9ba3 A:361-374,375-386,439-453,591-601 1wpg d1wpga3 A:361-374,375-386,439-453,591-601 1t5t d1t5ta3 A:361-374,375-386,439-453,591-601 3b9r d3b9rb3 B:361-374,375-386,439-453,591-601 1xp5 d1xp5a3 A:361-374,375-386,439-453,591-601 1t5s d1t5sa3 A:361-374,375-386,439-453,591-601 1su4 d1su4a3 A:361-374,375-386,439-453,591-601 1vfp d1vfpb3 B:361-374,375-386,439-453,591-601 1vfp d1vfpa3 A:361-374,375-386,439-453,591-601 2zbd d2zbda3 A:361-374,375-386,439-453,591-601 2zbe d2zbeb3 B:361-374,375-386,439-453,591-601 2zbe d2zbea3 A:361-374,375-386,439-453,591-601 1kju d1kjua3 A:363-374,375-386,439-453,591-600 284. d.232.1 Mago nashi protein Mago nashi protein beta(4)-alpha-beta(2)-alpha; 2 layers: alpha/beta; antiparallel beta-sheet, order: 651234 1rk8 d1rk8b_ B:5-13,22-29,54-69,85-94 1hl6 d1hl6d_ D:5-15,20-29,54-69,85-94 2j0q d2j0qc1 C:4-15,18-28,53-68,84-93 2j0q d2j0qf1 F:4-15,18-28,53-68,84-93 2hyi d2hyig1 G:4-15,18-28,53-68,84-93 1p27 d1p27a_ A:4-15,18-28,53-68,84-93 2j0s d2j0sc1 C:4-15,18-28,53-68,84-93 1hl6 d1hl6b_ B:5-17,18-29,54-69,85-94 1oo0 d1oo0a_ A:5-17,18-29,54-69,84-94 1p27 d1p27c_ C:4-16,17-28,53-68,83-93 2hyi d2hyia1 A:5-15,18-28,53-68,84-93 287. b.103.1 MoeA N-terminal region -like MoeA N-terminal region -like complex fold made of bifurcated and coiled b-sheets 2nqq d2nqqd2 D:38-42,152-156,157-168,170-176 1t3e d1t3eb2 B:353-357,473-477,478-489,491-497 1xi8 d1xi8b2 B:38-42,157-161,162-173,175-181 1t3e d1t3ea2 A:353-357,473-477,478-489,491-497 2nqv d2nqva2 A:36-42,152-157,157-168,170-176 1xi8 d1xi8a2 A:38-42,157-161,162-173,175-181 1uz5 d1uz5a2 A:36-40,155-159,160-171,173-179 2nrs d2nrsb2 B:38-42,152-156,157-168,170-176 1wu2 d1wu2a2 A:36-42,157-162,162-173,175-181 1g8r d1g8rb2 B:38-42,152-156,157-168,170-176 1g8r d1g8ra2 A:38-42,152-156,157-168,170-176 1wu2 d1wu2b2 B:36-42,157-162,162-173,175-181 1g8l d1g8la2 A:36-42,152-157,157-168,170-176 2nqq d2nqqb2 B:36-42,152-157,157-168,170-176 2nro d2nrob2 B:36-42,152-157,157-168,170-176 2nqs d2nqsa2 A:36-42,152-157,157-168,170-176 1fc5 d1fc5b2 B:36-42,152-157,157-168,170-176 2fu3 d2fu3a2 A:351-357,473-478,478-489,491-497 2fts d2ftsa2 A:351-357,473-478,478-489,491-497 2nqn d2nqna2 A:36-42,152-157,157-168,170-176 2nrp d2nrpa2 A:36-42,152-157,157-168,171-176 2nrs d2nrsa2 A:36-42,152-157,157-168,170-176 2nqu d2nqua2 A:36-42,152-157,157-168,170-176 2nqm d2nqma2 A:36-42,152-157,157-168,170-176 2nqn d2nqnb2 B:36-42,152-157,157-168,170-176 2nqr d2nqra2 A:37-42,152-157,157-168,170-176 2nqq d2nqqa2 A:36-42,152-157,157-168,170-176 2nqs d2nqsb2 B:36-42,152-157,157-168,170-176 2nrp d2nrpb2 B:36-42,152-157,157-168,170-176 2fu3 d2fu3b2 B:351-357,473-478,478-489,491-497 1fc5 d1fc5a2 A:38-42,152-156,157-168,170-176 2nqm d2nqmb2 B:36-42,152-157,157-168,170-176 2nqu d2nqub2 B:36-42,152-157,157-168,170-176 1g8l d1g8lb2 B:37-42,152-157,157-168,170-176 2nqk d2nqka2 A:37-42,152-157,157-168,170-176 2nqk d2nqkb2 B:37-42,152-157,157-168,170-176 2nqv d2nqvb2 B:37-42,152-157,157-168,170-176 2nqr d2nqrb2 B:37-42,152-157,157-168,170-176 2nro d2nroa2 A:37-42,152-157,157-168,170-176 2nqq d2nqqc2 C:37-42,152-157,157-168,170-176 291. f.8.1 Aerolisin/ETX pore-forming domain Aerolisin/ETX pore-forming domain 3 domains: (1) alpha+beta; (2&3) all-beta 3c0n d3c0na2 A:214-232,269-282,448-456,457-467 3c0n d3c0nb2 B:214-232,269-282,448-456,457-467 3c0m d3c0ma2 A:214-232,269-282,448-456,457-467 3c0m d3c0mb2 B:214-232,269-282,448-456,457-467 1z52 d1z52a2 A:214-232,269-282,448-456,457-467 3c0o d3c0ob2 B:214-232,269-282,448-456,457-467 3c0o d3c0oa2 A:214-232,269-282,448-456,457-467 1pre d1preb2 B:214-232,269-282,448-456,457-467 1z52 d1z52b2 B:214-232,269-282,448-456,457-467 295. b.95.1 Ganglioside M2 (gm2) activator Ganglioside M2 (gm2) activator sandwich; 8 strands in 2 sheets; greek-key: partial topological similarity to immunoglobulin-like folds 1pu5 d1pu5b_ B:51-62,75-81,81-91,136-148 1g13 d1g13b_ B:49-60,73-79,79-89,134-146 2ag2 d2ag2b1 B:51-62,75-81,81-91,136-148 1tjj d1tjjb_ B:51-62,75-81,81-91,136-148 1pu5 d1pu5a_ A:51-62,75-81,81-91,136-148 1g13 d1g13c_ C:49-60,73-79,79-89,134-146 1pub d1puba_ A:49-60,73-79,79-89,134-146 2ag2 d2ag2c1 C:51-62,75-81,81-91,136-148 2ag2 d2ag2a1 A:50-62,75-81,81-91,136-148 1pu5 d1pu5c_ C:51-62,75-81,81-91,135-148 1tjj d1tjja_ A:50-62,75-81,81-91,136-148 303. e.42.1 L-A virus major coat protein L-A virus major coat protein large protein without apparent domain division 1m1c d1m1cb_ B:24-39,40-55,357-385,586-600 1m1c d1m1ca_ A:24-39,40-55,357-379,586-601 304. d.58.60 Bacterial polysaccharide co-polymerase-like Decorated common fold with extra helical regions, which facilitate oligomerization Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 3b8p d3b8pb1 B:55-65,131-139,140-186,276-280 3b8p d3b8pc1 C:55-65,131-139,140-195,276-280 3b8p d3b8pd1 D:55-65,131-139,140-196,276-280 3b8o d3b8og1 G:55-65,156-167,168-230,305-312 3b8o d3b8oe1 E:55-65,156-167,168-230,305-313 3b8o d3b8od1 D:55-65,156-167,168-230,305-312 3b8o d3b8oa1 A:55-65,156-167,168-230,305-312 3b8o d3b8ob1 B:55-65,156-167,168-230,305-312 3b8o d3b8oh1 H:55-65,156-167,168-230,305-312 3b8o d3b8oc1 C:55-65,156-167,168-230,305-312 3b8o d3b8of1 F:55-65,156-167,168-230,305-312 3b8p d3b8pe1 E:55-65,131-139,140-202,276-280 3b8p d3b8pa1 A:55-65,131-139,140-203,276-280 3b8n d3b8nb1 B:65-74,171-178,180-251,320-324 3b8n d3b8ni1 I:65-74,171-178,180-251,320-324 3b8n d3b8nd1 D:65-74,171-178,180-251,320-324 3b8n d3b8nc1 C:65-74,171-178,180-251,320-324 3b8n d3b8na1 A:65-74,171-178,180-251,320-324 3b8n d3b8nf1 F:65-74,171-178,180-251,320-324 3b8n d3b8nh1 H:65-74,171-178,180-251,320-324 3b8n d3b8ng1 G:65-74,171-178,180-251,320-324 3b8n d3b8ne1 E:65-74,171-178,180-251,320-324 3b8m d3b8ma1 A:64-74,171-179,180-251,320-324 3b8m d3b8mb1 B:64-74,171-179,180-251,320-324 3b8m d3b8mc1 C:64-74,171-179,180-251,320-324