1. b.81.1 Trimeric LpxA-like enzymes superhelical turns are made of three short strands; duplication: the sequence hexapeptide repeats correspond to individual strands !
Single-stranded left-handed beta-helix superhelix turns are made of parallel beta-strands and (short) turns
2jf3 d2jf3a1 A:161-168,173-178,179-184,243-256
2aq9 d2aq9a1 A:161-168,173-178,179-184,243-256
2qiv d2qivx1 X:161-168,173-178,179-184,243-256
1lxa d1lxaa_ A:161-168,173-178,179-184,243-256
2jf2 d2jf2a1 A:161-168,173-178,179-184,243-256
2qia d2qiaa1 A:161-168,173-178,179-184,243-256
2. c.23.16 Class I glutamine amidotransferase-like conserved positions of the oxyanion hole and catalytic nucleophile; different constituent families contain different additional structures !
Flavodoxin-like 3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345
1l9x d1l9xb_ B:10-16,29-34,67-73,81-101
1l9x d1l9xa_ A:10-16,29-34,67-73,81-101
1l9x d1l9xc_ C:10-16,29-34,67-73,81-101
1l9x d1l9xd_ D:10-16,29-34,67-73,81-101
3. c.1.8 (Trans)glycosidases
TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites
1ktb d1ktba2 A:98-107,107-111,135-142,145-164
4. c.37.1 P-loop containing nucleoside triphosphate hydrolases division into families based on beta-sheet topologies !
P-loop containing nucleoside triphosphate hydrolases 3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
2b8t d2b8td1 D:42-49,62-68,91-97,102-116
1znx d1znxa1 A:21-28,96-103,114-120,188-201
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 75 (enumeration index: query126) of S4
3fs5 A:32-39,45-49,83-90,94-109
3i3x A:156-163,168-173,174-179,238-251
3i3x B:156-163,168-173,174-179,238-251
3i3x C:156-163,168-173,174-179,238-251
3hsq C:156-163,168-173,174-179,238-251
3f4a B:32-39,45-49,84-90,92-109
3f4a A:32-39,45-49,84-90,93-108
3a57 A:12-23,32-41,144-154,157-164
3kog A:42-55,64-70,109-121,175-187
3i3a C:156-163,168-173,174-179,238-251
3i3a B:156-163,168-173,174-179,238-251
3i3a A:156-163,168-173,174-179,238-251
2fgy A:164-174,176-180,233-244,259-283
2fgy B:164-174,176-180,233-244,259-283
3c8v C:350-357,356-362,370-375,411-431
3c8v D:350-357,356-362,370-375,411-431
3c8v A:350-357,356-362,370-375,411-431
3c8v B:350-357,356-362,370-375,411-431