| SCOP superfamily ID |
superfamiily description |
corresponding fold description |
| d.87.1 | FAD/NAD-linked reductases, dimerisation (C-terminal) domain both first two domains are of same beta/beta/alpha fold ! | CO dehydrogenase flavoprotein C-domain-like core: beta(3,4)-alpha(3); alpha+beta sandwich |
| d.207.1 | Thymidylate synthase-complementing protein Thy1 | Thymidylate synthase-complementing protein Thy1 complex alpha+beta fold; contains antiparallel 5-stranded beta-sheet: order 12354 |
| c.8.5 | GroEL apical domain-like | The "swivelling" beta/beta/alpha domain 3 layers: b/b/a; the central sheet is parallel, and the other one is antiparallel; there are some variations in topology ! this domain is thought to be mobile in most multi-domain proteins known to contain it |
| d.54.1 | Enolase N-terminal domain-like | Enolase N-terminal domain-like beta(3)-alpha(3); meander and up-and-down bundle |
| d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like | CO dehydrogenase flavoprotein C-domain-like core: beta(3,4)-alpha(3); alpha+beta sandwich |
| d.224.1 | SufE/NifU iron-sulfur cluster assembly proteins ! | SufE/NifU alpha(2)-beta(3)-alpha(3); 2 layers alpha/beta, 3-stranded antiparallel beta-sheet; order 123 |
| d.55.1 | Ribosomal protein L22 some topological similarity to prokaryotic ribosomal protein L17 ! | Ribosomal protein L22 beta-alpha(3)-beta(2); 2 layers: alpha/beta; related to the enolase/MLE N-domain fold by a circular permutation |
| e.67.1 | PH0156-like | PH0156-like 2 (sub)domains; d1: [alpha/beta with central mixed beta-sheet, order: 23415876, similarity to the G protein but no P-loop]; d2: [all-alpha, 5 helices, provides dimerization interface] |
| e.51.1 | Urocanase | Urocanase 3 domains; d1: alpha+beta [alpha(2)-beta(3); mixed sheet: 213]; d2: alpha/beta of the NAD(P)-binding Rossmann-fold superfamily (scop_sf 51735, most similar to scop_fa 51883 and scop_fa 51736); d3: alpha+beta of the glutamine synthetase/guanido kinase fold (scop_cf 55930); d1 and d3 form a single beta-sheet |
| a.267.1 | Topoisomerase V catalytic domain-like | Topoisomerase V catalytic domain-like multihelical; irregular array; contains small amount of beta-structure and a 3-helical bundle with a variant homeofomain-like fold and HTH motif (scop_cf 46688) |
| c.150.1 | EreA/ChaN-like there are four conserved residues in the putative active site: two His and two Glu | EreA/ChaN-like Core: 3 layers: a/b/a; parallel beta-sheet of 5 strands, order:51423; |
| e.40.1 | Cullin homology domain | Cullin homology domain 3 domains: (1) 4-helical bundle; (2) alpha+beta; (3) "winged helix"-like |
| c.85.1 | FucI/AraA N-terminal and middle domains | FucI/AraA N-terminal and middle domains consists of two domains of similar topology, 3 layers (a/b/a) each ! Domain 1 (1-173) has parallel beta-sheet of 5 strands, order 21345 ! Domain 2 (174-355) has parallel beta-sheet of 4 strands, order 2134 |
| d.75.1 | tRNA-intron endonuclease N-terminal domain-like | MutS N-terminal domain-like beta(2)-alpha-beta(2)-alpha-beta(2); 2 layers, alpha/beta |
| d.335.1 | L,D-transpeptidase pre-catalytic domain-like | L,D-transpeptidase pre-catalytic domain-like unusual fold, made of four helices and four 2-3 stranded beta-sheets |
| d.129.4 | Cell-division protein ZipA, C-terminal domain contains a single copy of this fold ! | TBP-like beta-alpha-beta(4)-alpha |
| c.56.6 | LigB-like circular permutation of the common fold, most similar to the PNP fold ! | Phosphorylase/hydrolase-like core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops |
| c.64.1 | Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 3 layers: a/b/a; mixed beta-sheet of 6 strands, order 231456; strand 3 is antiparallel to the rest |
| a.264.1 | Duffy binding domain-like | Duffy binding domain-like consist of two subdomains, each containing a three-helical bundle |
| f.13.1 | Family A G protein-coupled receptor-like | Family A G protein-coupled receptor-like core: up-and-down bundle of seven transmembrane helices tilted 20 degrees with respect to the plane of the membrane |