4. d.142.1 Glutathione synthetase ATP-binding domain-like ATP-grasp Consists of two subdomains with different alpha+beta folds ! shares functional and structural similarities with the PIPK and protein kinase superfamilies 1gsa d1gsaa2 A:123-132,137-142,194-200,277-284 1gsh d1gsha2 A:123-132,137-142,194-200,277-284 2glt d2glta2 A:123-132,137-142,194-200,277-284 1glv d1glva2 A:123-132,137-142,194-200,277-284 1ggo d1ggoa3 A:20-33,38-43,235-242,330-339 1vkz d1vkza3 A:94-106,111-116,173-178,267-277 2dik d2dika3 A:20-33,38-43,235-242,330-339 1vkz d1vkzb3 B:94-106,111-116,173-178,267-277 3eth d3etha3 A:79-91,96-100,149-155,232-242 1b6s d1b6sd3 D:79-91,96-100,149-155,232-242 1jde d1jdea3 A:20-33,39-43,235-242,329-339 3etj d3etjb3 B:79-91,96-100,149-155,232-242 3etj d3etja3 A:79-91,96-100,149-155,232-242 3eth d3ethb3 B:79-91,96-100,149-155,232-242 1b6s d1b6sc3 C:79-91,96-100,149-155,232-242 1b6s d1b6sa3 A:79-91,96-100,149-155,232-242 1b6s d1b6sb3 B:79-91,96-100,149-155,232-242 1dik d1dika3 A:20-33,38-43,235-242,329-339 1kc7 d1kc7a3 A:20-33,38-43,235-242,329-339 1b6r d1b6ra3 A:79-91,96-100,149-155,232-242 1bxr d1bxra6 A:674-686,691-696,749-755,835-845 1kbl d1kbla3 A:20-33,38-43,235-242,329-339 1bxr d1bxrg6 G:674-686,691-696,749-755,835-845 1bxr d1bxre6 E:674-686,691-696,749-755,835-845 1i7l d1i7lb2 B:225-241,249-255,301-308,381-391 1bxr d1bxrc6 C:674-686,691-696,749-755,835-845 1kj9 d1kj9a3 A:113-126,131-136,191-197,273-283 1pk8 d1pk8c2 C:224-240,248-254,300-307,380-390 1kjj d1kjja3 A:113-126,131-136,191-197,273-283 1eyz d1eyza3 A:113-126,131-136,191-197,273-283 1kji d1kjia3 A:113-126,131-136,191-197,273-283 1pk8 d1pk8g2 G:224-240,248-254,300-307,380-390 1kj8 d1kj8a3 A:113-126,131-136,191-197,273-283 1ez1 d1ez1a3 A:113-126,131-136,191-197,273-283 1i7l d1i7la2 A:225-241,250-255,301-308,381-391 1pk8 d1pk8e2 E:224-240,248-254,300-307,380-390 1i7n d1i7na2 A:225-241,249-255,301-308,381-391 1aux d1auxa2 A:224-240,249-254,300-307,380-390 1pk8 d1pk8h2 H:224-240,248-254,300-307,380-390 1px2 d1px2b2 B:224-240,248-254,300-307,380-390 1pk8 d1pk8d2 D:224-240,248-254,300-307,380-390 1pk8 d1pk8f2 F:224-240,248-254,300-307,380-390 1kjq d1kjqa3 A:113-126,131-136,191-197,273-283 1i7n d1i7nb2 B:225-241,249-255,301-308,381-391 1aux d1auxb2 B:224-240,249-254,300-307,380-390 1pk8 d1pk8b2 B:224-240,248-254,300-307,380-390 1px2 d1px2a2 A:224-240,248-254,300-307,380-390 1auv d1auvb2 B:224-240,249-254,300-307,380-390 1uc9 d1uc9a2 A:88-100,105-110,165-171,244-252 1pk8 d1pk8a2 A:224-240,248-254,300-307,380-390 1kjj d1kjjb3 B:113-126,131-136,191-197,273-283 1uc9 d1uc9b2 B:88-100,105-110,165-171,244-252 1kji d1kjib3 B:113-126,131-136,191-197,273-283 1eyz d1eyzb3 B:113-126,131-136,191-197,273-283 1kj9 d1kj9b3 B:113-126,131-136,191-197,273-283 1iov d1iova2 A:96-108,113-118,176-182,264-273 1kjq d1kjqb3 B:113-126,131-136,191-197,273-283 1ez1 d1ez1b3 B:113-126,130-136,191-197,273-283 1auv d1auva2 A:224-240,249-254,300-307,380-390 1kj8 d1kj8b3 B:113-126,131-136,191-197,273-283 2dln d2dlna2 A:96-108,113-118,176-182,264-273 1ce8 d1ce8g6 G:674-686,691-695,750-755,835-845 1c3o d1c3oc6 C:674-686,691-695,750-755,835-845 1kee d1keea6 A:674-686,691-695,750-755,835-845 1ehi d1ehia2 A:135-147,152-157,212-218,310-319 1c30 d1c30c6 C:674-686,691-695,750-755,835-845 1kee d1keeg6 G:674-686,691-695,750-755,835-845 1kee d1keec6 C:674-686,691-695,750-755,835-845 1a9x d1a9xa6 A:674-686,691-695,750-755,835-845 1iow d1iowa2 A:96-108,113-118,176-182,264-273 1c3o d1c3oa6 A:674-686,691-695,750-755,835-845 1cs0 d1cs0c6 C:674-686,691-695,750-755,835-845 1m6v d1m6va6 A:674-686,691-695,750-755,835-845 1jdb d1jdbb6 B:673-685,690-694,749-754,834-844 1c3o d1c3oe6 E:674-686,691-695,750-755,835-845 1c3o d1c3og6 G:674-686,691-695,750-755,835-845 1jdb d1jdbe6 E:673-685,690-694,749-754,834-844 1cs0 d1cs0g6 G:674-686,691-695,750-755,835-845 1cs0 d1cs0a6 A:674-686,691-695,750-755,835-845 1a9x d1a9xc6 C:2674-2686,2691-2695,2750-2755,2835-2845 1m6v d1m6vc6 C:674-686,691-695,750-755,835-845 1t36 d1t36c6 C:674-686,691-695,750-755,835-845 1kee d1keee6 E:674-686,691-695,750-755,835-845 1c30 d1c30a6 A:674-686,691-695,750-755,835-845 1cs0 d1cs0e6 E:674-686,691-695,750-755,835-845 1ce8 d1ce8c6 C:674-686,691-695,750-755,835-845 1vkz d1vkza3 A:94-106,130-137,144-150,267-277 1jdb d1jdbh6 H:673-685,690-694,749-754,834-844 1uc8 d1uc8a2 A:88-100,105-111,164-171,244-252 1uc8 d1uc8b2 B:88-100,105-111,164-171,244-252 1m6v d1m6vg6 G:674-686,691-695,750-755,835-845 1t36 d1t36g6 G:674-686,691-695,750-755,835-845 1t36 d1t36a6 A:674-686,691-695,750-755,835-845 1vkz d1vkzb3 B:94-106,130-137,144-150,267-277 1ce8 d1ce8e6 E:674-686,691-695,750-755,835-845 1ce8 d1ce8a6 A:674-686,691-695,750-755,835-845 1c30 d1c30g6 G:674-686,691-695,750-755,835-845 1t36 d1t36e6 E:674-686,691-695,750-755,835-845 1m6v d1m6ve6 E:674-686,691-695,750-755,835-845 1c30 d1c30e6 E:674-686,691-695,750-755,835-845 1a9x d1a9xg6 G:6674-6686,6691-6695,6750-6755,6835-6845 1a9x d1a9xe6 E:4674-4686,4691-4695,4750-4755,4835-4845 1ce8 d1ce8a5 A:128-140,145-150,203-209,292-303 1ce8 d1ce8e5 E:128-140,145-150,203-209,292-303 1ce8 d1ce8c5 C:128-140,145-150,203-209,292-303 1bxr d1bxra5 A:128-140,145-150,203-209,292-303 1c30 d1c30c5 C:128-140,145-150,203-209,292-303 1cs0 d1cs0a5 A:128-140,145-150,203-209,292-303 1a9x d1a9xa5 A:128-140,145-150,203-209,292-303 1m6v d1m6va5 A:128-140,145-150,203-209,292-303 1m6v d1m6vc5 C:128-140,145-150,203-209,292-303 1bxr d1bxrc5 C:128-140,145-150,203-209,292-303 1bxr d1bxrg5 G:128-140,145-150,203-209,292-303 1c3o d1c3oa5 A:128-140,145-150,203-209,292-303 1c3o d1c3oc5 C:128-140,145-150,203-209,292-303 1cs0 d1cs0c5 C:128-140,145-150,203-209,292-303 1t36 d1t36c5 C:128-140,145-150,203-209,292-303 1t36 d1t36a5 A:128-140,145-150,203-209,292-303 1ce8 d1ce8g5 G:128-140,145-150,203-209,292-303 1a9x d1a9xc5 C:2128-2140,2145-2150,2203-2209,2292-2303 1c30 d1c30a5 A:128-140,145-150,203-209,292-303 1cs0 d1cs0g5 G:128-140,145-150,203-209,292-303 1kee d1keec5 C:128-140,145-150,203-209,292-303 1cs0 d1cs0e5 E:128-140,145-150,203-209,292-303 1c3o d1c3oe5 E:128-140,145-150,203-209,292-303 1m6v d1m6vg5 G:128-140,145-150,203-209,292-303 1m6v d1m6ve5 E:128-140,145-150,203-209,292-303 1c30 d1c30e5 E:128-140,145-150,203-209,292-303 1kee d1keea5 A:128-140,145-150,203-209,292-303 1bxr d1bxre5 E:128-140,145-150,203-209,292-303 1kee d1keee5 E:128-140,145-150,203-209,292-303 1jdb d1jdbh5 H:127-139,144-149,202-208,291-302 1c3o d1c3og5 G:128-140,145-150,203-209,292-303 1t36 d1t36e5 E:128-140,145-150,203-209,292-303 1vbg d1vbga3 A:25-38,43-48,238-245,332-342 1jdb d1jdbe5 E:127-139,144-149,202-208,291-302 1c30 d1c30g5 G:128-140,145-150,203-209,292-303 1jdb d1jdbb5 B:127-139,144-149,202-208,291-302 1jdb d1jdbk5 K:127-139,144-149,202-208,291-302 1t36 d1t36g5 G:128-140,145-150,203-209,292-303 1kee d1keeg5 G:128-140,145-150,203-209,292-303 1a9x d1a9xe5 E:4128-4140,4145-4150,4203-4209,4292-4303 1a9x d1a9xg5 G:6128-6140,6145-6150,6203-6209,6292-6303 1vbh d1vbha3 A:25-38,43-48,238-245,332-342 1gso d1gsoa3 A:104-116,121-126,183-189,280-290 1e4e d1e4eb2 B:132-144,149-155,202-209,299-308 1ehi d1ehib2 B:535-547,552-558,611-618,710-719 1jdb d1jdbk6 K:673-685,690-695,748-754,834-844 2nu8 d2nu8e2 E:4-16,21-26,95-101,207-213 2nu8 d2nu8b2 B:4-16,21-26,95-101,207-213 2nu6 d2nu6e2 E:4-16,21-26,95-101,207-213 2nu7 d2nu7b2 B:4-16,21-26,95-101,207-213 2nu7 d2nu7e2 E:4-16,21-26,95-101,207-213 2nu6 d2nu6b2 B:4-16,21-26,95-101,207-213 1jkj d1jkje2 E:4-16,21-26,95-101,207-213 1jkj d1jkjb2 B:4-16,21-26,95-101,207-213 1e4e d1e4ea2 A:132-144,149-155,202-209,299-308 2r82 d2r82a3 A:20-33,38-43,235-242,329-339 2nu9 d2nu9i2 I:4-16,21-26,95-101,207-213 2nu9 d2nu9e2 E:4-16,21-26,95-101,207-213 2nua d2nuae2 E:4-16,21-26,95-101,207-213 2nu9 d2nu9g2 G:4-16,21-26,95-101,207-213 2nua d2nuab2 B:4-16,21-26,95-101,207-213 2nu9 d2nu9b2 B:4-16,21-26,95-101,207-213 1jll d1jlle2 E:4-16,21-26,95-101,207-213 1jll d1jllb2 B:4-16,21-26,95-101,207-213 1scu d1scue2 E:4-16,21-26,95-101,207-213 1scu d1scub2 B:4-16,21-26,95-101,207-213 1cqj d1cqjb2 B:4-16,21-26,95-101,207-213 2scu d2scue2 E:4-16,21-26,95-101,207-213 1cqi d1cqie2 E:4-16,21-26,95-101,207-213 1cqj d1cqje2 E:4-16,21-26,95-101,207-213 1cqi d1cqib2 B:4-16,21-26,95-101,207-213 2fp4 d2fp4b2 B:4-16,21-26,102-108,214-220 2scu d2scub2 B:4-16,21-26,95-101,207-213 2fpg d2fpgb2 B:4-16,21-26,102-108,214-220 1euc d1eucb2 B:4-16,21-26,102-108,214-220 2fpp d2fppb2 B:4-16,21-26,102-108,214-220 1cs0 d1cs0a5 A:305-316,354-362,380-389,614-619 1cs0 d1cs0e5 E:305-316,354-362,380-389,614-619 2fpi d2fpib2 B:4-16,21-26,102-108,214-220 1m6v d1m6va5 A:305-316,354-362,380-389,614-619 1eud d1eudb2 B:4-16,21-26,102-108,214-220 1cs0 d1cs0c5 C:305-316,354-362,380-389,614-619 1ce8 d1ce8c5 C:305-316,354-362,380-389,614-619 1ce8 d1ce8g5 G:305-316,354-362,380-389,614-619 1c3o d1c3oa5 A:305-316,354-362,381-389,614-619 1c30 d1c30a5 A:305-316,354-362,380-389,614-619 1a9x d1a9xe5 E:4305-4316,4354-4362,4380-4389,4614-4619 1jdb d1jdbk5 K:304-315,353-361,379-388,613-618 1m6v d1m6ve5 E:305-316,354-362,381-389,614-619 1jdb d1jdbe5 E:304-315,353-361,379-388,613-618 1cs0 d1cs0g5 G:305-316,354-362,381-389,614-619 1c3o d1c3oe5 E:305-316,354-362,381-389,614-619 1c30 d1c30e5 E:305-316,354-362,380-389,614-619 1a9x d1a9xa5 A:305-316,354-362,380-389,614-619 1kee d1keea5 A:305-316,354-362,380-389,614-619 1kee d1keec5 C:305-316,354-362,380-389,614-619 1c3o d1c3oc5 C:305-316,354-362,381-389,614-619 1t36 d1t36c5 C:305-316,354-362,380-389,614-619 1c30 d1c30c5 C:305-316,354-362,381-389,614-619 1m6v d1m6vg5 G:305-316,354-362,380-389,614-619 1ce8 d1ce8e5 E:305-316,354-362,380-389,614-619 1kee d1keee5 E:305-316,354-362,380-389,614-619 1c3o d1c3og5 G:305-316,354-362,381-389,614-619 1ce8 d1ce8a5 A:305-316,354-362,380-389,614-619 1bxr d1bxre5 E:305-316,354-362,380-389,614-619 1a9x d1a9xg5 G:6305-6316,6354-6362,6380-6389,6614-6619 1a9x d1a9xc5 C:2305-2316,2354-2362,2380-2389,2614-2619 1t36 d1t36a5 A:305-316,354-362,380-389,614-619 1t36 d1t36e5 E:305-316,354-362,380-389,614-619 1kee d1keeg5 G:305-316,354-362,381-389,614-619 1m6v d1m6vc5 C:305-316,354-362,380-389,614-619 1t36 d1t36g5 G:305-316,354-362,380-389,614-619 1jdb d1jdbb5 B:304-315,353-361,379-388,613-618 1jdb d1jdbh5 H:304-315,353-361,379-388,613-618 1c30 d1c30g5 G:305-316,354-362,380-389,614-619 1bxr d1bxra5 A:305-316,354-362,380-389,614-619 1bxr d1bxrc5 C:305-316,354-362,380-389,614-619 1bxr d1bxrg5 G:305-316,354-362,381-389,614-619 6. d.137.1 Monooxygenase (hydroxylase) regulatory protein duplication: consists of two beta-alpha-(beta)-beta(2) motifs; some topological similarity to the ferredoxin-like fold ! Monooxygenase (hydroxylase) regulatory protein corner-like structure formed by two sheets and filled in with 2-3 helices 2mob d2moba_ A:44-65,67-73,74-81,82-87 2bf2 d2bf2a1 A:19-35,39-44,46-54,55-59 2bf2 d2bf2b1 B:19-35,39-45,46-54,55-59 1g11 d1g11a_ A:22-35,39-44,46-54,55-59 2bf5 d2bf5a1 A:19-35,39-45,46-53,54-59 2bf5 d2bf5b1 B:20-35,39-44,46-53,54-59 1g10 d1g10a_ A:22-35,39-44,46-53,55-59 1ckv d1ckva_ A:45-64,67-74,75-82,83-89 9. b.85.4 dUTPase-like forms tight trimer through an additional beta-sheet in each subunit ! subunit beta-sheets are orthogonally packed around the three-fold axis ! beta-clip double-stranded ribbon sharply bent in two places; the ribbon ends form incomplete barrel; jelly-roll 1f7q d1f7qc_ C:455-462,462-466,478-486,489-495 1snf d1snfb_ B:64-72,71-76,90-98,102-108 1snf d1snfc_ C:64-72,71-76,90-98,102-108 1slh d1slhc_ C:64-72,71-76,90-98,102-108 1six d1sixa_ A:64-72,71-76,90-98,101-108 1f7p d1f7pc_ C:455-462,462-466,478-486,489-495 1sm8 d1sm8a_ A:64-72,71-76,90-98,101-108 3ehw d3ehwb1 B:85-93,92-97,108-117,120-126 3ehw d3ehwy1 Y:85-93,92-97,108-117,120-126 3ehw d3ehwc1 C:85-93,92-97,108-117,120-126 3ehw d3ehwz1 Z:85-93,92-97,108-117,120-126 2hqu d2hqua1 A:85-93,92-97,108-117,120-126 1q5h d1q5hb_ B:62-70,69-74,85-94,97-103 1q5u d1q5ux_ X:62-70,69-74,85-94,97-103 1f7r d1f7ra_ A:55-62,62-66,77-86,89-95 1q5u d1q5uz_ Z:62-70,69-74,85-94,97-103 1q5u d1q5uy_ Y:62-70,69-74,85-94,97-103 1q5h d1q5ha_ A:62-70,69-74,85-94,97-103 1q5h d1q5hc_ C:62-70,69-74,85-94,97-103 1pkj d1pkja_ A:117-124,124-128,142-149,151-157 1vyq d1vyqa1 A:91-98,98-102,116-124,127-133 1f7p d1f7pb_ B:255-262,262-266,277-286,289-295 1vyq d1vyqb1 B:91-98,98-102,116-124,127-133 1vyq d1vyqc1 C:91-98,98-102,116-124,127-133 2bsy d2bsya2 A:171-178,178-182,190-199,202-208 1sm8 d1sm8b_ B:64-72,72-76,90-98,102-108 3ehw d3ehwa1 A:85-93,93-97,108-117,120-126 1sjn d1sjnb_ B:64-72,72-76,90-98,102-108 3ehw d3ehwx1 X:85-93,93-97,108-117,120-126 1slh d1slhb_ B:64-72,72-76,90-98,102-108 1sjn d1sjna_ A:64-72,72-76,90-98,102-108 1smc d1smcb_ B:64-72,72-76,90-98,102-108 1slh d1slha_ A:64-72,72-76,90-98,102-108 2hqu d2hqub1 B:85-93,93-97,108-117,120-126 1smc d1smcc_ C:64-72,71-76,87-98,102-108 1sjn d1sjnc_ C:64-72,72-76,90-98,102-108 1xs1 d1xs1b_ B:110-117,117-121,135-142,145-150 1f7o d1f7oc_ C:455-462,462-466,477-485,488-495 1xs6 d1xs6e_ E:110-117,117-121,135-142,145-150 1duc d1duca_ A:56-63,63-67,78-86,89-96 1xs1 d1xs1d_ D:110-117,117-121,135-142,145-150 1xs4 d1xs4a_ A:110-117,117-121,135-142,145-150 1xs4 d1xs4d_ D:110-117,117-121,135-142,145-150 1xs4 d1xs4b_ B:110-117,117-121,135-142,145-150 1xs1 d1xs1f_ F:110-117,117-121,135-142,145-150 1xs6 d1xs6d_ D:110-117,117-121,135-142,145-150 1xs6 d1xs6c_ C:110-117,117-121,135-142,145-150 1xs1 d1xs1c_ C:110-117,117-121,135-142,145-150 1xs6 d1xs6a_ A:110-117,117-121,135-142,145-150 1xs1 d1xs1e_ E:110-117,117-121,135-142,145-150 1dun d1duna_ A:56-63,63-67,78-86,89-96 1xs6 d1xs6b_ B:110-117,117-121,135-142,145-150 1xs4 d1xs4e_ E:110-117,117-121,135-142,145-150 1xs4 d1xs4c_ C:110-117,117-121,135-142,145-150 1xs4 d1xs4f_ F:110-117,117-121,135-142,145-150 1f7n d1f7na_ A:55-62,62-66,78-85,88-95 1dup d1dupa_ A:71-79,78-83,94-105,107-113 1xs6 d1xs6f_ F:110-117,117-121,135-142,145-150 2py4 d2py4a1 A:64-72,72-76,90-97,101-108 1xs1 d1xs1a_ A:110-117,117-121,135-142,145-150 1f7d d1f7da_ A:55-62,62-66,78-85,88-95 1f7k d1f7ka_ A:55-62,62-66,78-85,88-95 1f7q d1f7qb_ B:255-262,262-266,278-285,288-295 1f7n d1f7nb_ B:255-262,262-266,278-285,288-295 1f7d d1f7db_ B:255-262,262-266,277-285,288-295 1smc d1smca_ A:64-72,72-76,90-97,101-108 2hqu d2hquc1 C:85-93,93-97,105-116,119-126 1snf d1snfa_ A:64-72,72-76,90-97,101-108 1f7k d1f7kb_ B:255-262,262-266,275-285,288-295 1f7d d1f7da_ A:55-62,62-66,78-85,94-106 1sm8 d1sm8c_ C:64-72,72-76,87-98,102-108 1mq7 d1mq7a_ A:65-72,72-76,87-98,102-108 1f7k d1f7ka_ A:55-62,62-66,78-85,94-106 1f7n d1f7nb_ B:255-262,262-266,278-285,294-306 2bt1 d2bt1a2 A:171-178,178-182,189-198,201-208 1f7n d1f7na_ A:55-62,62-66,78-85,94-106 1f7q d1f7qb_ B:255-262,262-266,278-285,294-306 1syl d1syla_ A:71-79,79-83,94-105,108-113 1rnj d1rnja_ A:71-79,79-83,94-105,108-113 1rn8 d1rn8a_ A:71-79,79-83,94-105,108-113 1vyq d1vyqb1 B:91-98,98-102,116-124,136-141 1vyq d1vyqa1 A:91-98,98-102,116-124,136-141 1seh d1seha_ A:71-79,79-83,94-104,107-113 1duc d1duca_ A:56-63,63-67,78-86,95-107 1f7d d1f7db_ B:255-262,262-266,277-285,294-306 1f7o d1f7oc_ C:455-462,462-466,477-485,494-506 1euw d1euwa_ A:71-79,79-83,94-104,107-113 1vyq d1vyqc1 C:91-98,98-102,116-124,136-141 1eu5 d1eu5a_ A:71-79,79-83,94-104,107-112 1f7q d1f7qc_ C:455-462,462-466,478-486,494-506 1f7p d1f7pc_ C:455-462,462-466,478-486,494-506 2hrm d2hrma1 A:71-79,79-83,94-104,107-113 1dun d1duna_ A:56-63,63-67,78-86,95-107 2hr6 d2hr6a1 A:71-79,79-83,94-104,107-113 2bt1 d2bt1a2 A:171-178,178-182,189-198,207-219 1dud d1duda_ A:71-79,79-83,94-104,107-113 1f7k d1f7kb_ B:255-262,262-266,275-285,294-306 1eu5 d1eu5a_ A:71-79,79-83,94-104,113-125 1xs1 d1xs1a_ A:110-117,117-121,135-142,151-163 1xs1 d1xs1d_ D:110-117,117-121,135-142,151-163 1f7r d1f7ra_ A:55-62,62-66,77-86,94-106 2hr6 d2hr6a1 A:71-79,79-83,94-104,115-125 1xs6 d1xs6c_ C:110-117,117-121,135-142,151-163 2hqu d2hqua1 A:85-93,92-97,108-117,125-137 1q5h d1q5ha_ A:62-70,69-74,85-94,102-114 1rn8 d1rn8a_ A:71-79,79-83,94-105,115-125 2hqu d2hqub1 B:85-93,93-97,108-117,125-137 1f7p d1f7pb_ B:255-262,262-266,277-286,294-306 3ehw d3ehwb1 B:85-93,92-97,108-117,125-138 2hqu d2hquc1 C:85-93,93-97,105-116,125-138 2bsy d2bsya2 A:171-178,178-182,190-199,207-219 3ehw d3ehwz1 Z:85-93,92-97,108-117,125-138 1q5u d1q5uz_ Z:62-70,69-74,85-94,102-115 1xs4 d1xs4d_ D:110-117,117-121,135-142,153-163 1xs4 d1xs4b_ B:110-117,117-121,135-142,153-163 1xs6 d1xs6a_ A:110-117,117-121,135-142,153-163 1xs1 d1xs1e_ E:110-117,117-121,135-142,152-163 1xs6 d1xs6b_ B:110-117,117-121,135-142,152-163 1xs6 d1xs6d_ D:110-117,117-121,135-142,152-163 1xs1 d1xs1b_ B:110-117,117-121,135-142,152-163 1xs4 d1xs4c_ C:110-117,117-121,135-142,152-163 1xs4 d1xs4a_ A:110-117,117-121,135-142,152-163 1xs1 d1xs1f_ F:110-117,117-121,135-142,152-163 1xs4 d1xs4e_ E:110-117,117-121,135-142,152-163 1xs4 d1xs4f_ F:110-117,117-121,135-142,152-163 1xs6 d1xs6e_ E:110-117,117-121,135-142,152-163 1xs6 d1xs6f_ F:110-117,117-121,135-142,152-163 1xs1 d1xs1c_ C:110-117,117-121,135-142,152-165 10. b.2.4 Alpha-macroglobulin receptor domain Common fold of diphtheria toxin/transcription factors/cytochrome f sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold 1ayo d1ayoa_ A:57-67,68-76,77-85,90-100 1ayo d1ayob_ B:57-68,68-76,77-85,90-100 1bv8 d1bv8a_ A:56-67,70-76,77-85,90-99 1edy d1edyb_ B:57-68,69-77,78-86,91-101 1edy d1edya_ A:57-68,69-77,78-86,89-101 13. d.250.1 Folate-binding domain some topological similarity to Formylmethanofuran:tetrahydromethanopterin formyltransferase ! Folate-binding domain duplication: consists of two beta(2)-alpha-beta(3)-alpha subdomains swapped with the first strands 1vlo d1vloa2 A:5-15,16-22,23-30,43-50 1wos d1wosa2 A:4-14,15-21,22-29,42-49 1wop d1wopa2 A:4-14,15-21,22-29,42-49 1wor d1wora2 A:4-14,15-21,22-29,42-49 1woo d1wooa2 A:4-14,15-21,22-29,42-49 1v5v d1v5va2 A:10-18,19-25,26-32,46-53 1pj7 d1pj7a4 A:433-443,443-450,451-459,499-506 1pj6 d1pj6a4 A:433-443,443-450,451-459,499-506 1v5v d1v5vb2 B:10-18,19-25,26-32,46-53 1pj5 d1pj5a4 A:433-443,443-450,451-459,499-506 19. d.150.1 4'-phosphopantetheinyl transferase possibly related to the IspF ( 4'-phosphopantetheinyl transferase beta-alpha(3)-beta(2) motif 1fte d1ftec_ C:3044-3067,3078-3084,3086-3093,3097-3107 1fth d1fthc_ C:3044-3067,3078-3084,3086-3092,3097-3107 1ftf d1ftfb_ B:2044-2067,2078-2084,2086-2093,2097-2107 1ftf d1ftfc_ C:3044-3067,3078-3084,3086-3093,3097-3107 1f7t d1f7tf_ F:42-65,77-83,85-91,98-107 1fte d1fteb_ B:2044-2067,2078-2084,2086-2093,2097-2107 1fth d1fthb_ B:2044-2067,2078-2084,2086-2093,2097-2107 1fth d1ftha_ A:1044-1067,1078-1084,1086-1093,1097-1107 1f7t d1f7tc_ C:42-65,77-83,85-91,98-107 1ftf d1ftfa_ A:1044-1067,1078-1084,1086-1093,1097-1107 1fte d1ftea_ A:1044-1067,1078-1084,1086-1093,1097-1107 1f7t d1f7tb_ B:42-65,77-83,85-91,97-107 1f80 d1f80b_ B:42-65,76-83,85-92,97-107 1f80 d1f80c_ C:42-65,77-83,85-91,97-107 1f7t d1f7ta_ A:42-65,76-83,85-92,98-107 1f7t d1f7td_ D:42-65,76-83,85-92,98-107 1f80 d1f80a_ A:42-65,76-83,85-92,96-107 20. b.28.1 Baculovirus p35 protein has a few helices inserted in loops ! Baculovirus p35 protein sandwich; 14 strands in 2 sheets; greek-key 1i3p d1i3pa_ A:206-217,260-274,275-284,290-297 2fun d2func1 C:1206-1217,1268-1274,1275-1284,1290-1297 1p35 d1p35a_ A:206-217,268-274,275-284,290-297 1i4e d1i4ea_ A:206-217,268-274,275-284,290-297 1i3s d1i3sa_ A:206-217,268-274,275-284,290-297 1p35 d1p35b_ B:206-217,258-274,275-284,290-297 2fun d2funa1 A:206-217,258-274,275-284,290-297 1i3s d1i3sb_ B:206-217,258-274,275-284,290-297 1i3s d1i3sc_ C:206-217,258-274,275-284,290-297 1p35 d1p35c_ C:206-217,256-274,275-284,290-297 31. b.128.1 Hypothetical protein YojF Hypothetical protein YojF pseudobarrel; capped at one end by an alpha-helix 1njh d1njha_ A:5-17,55-62,64-72,90-100 46. b.124.1 HesB-like domain HesB-like domain barrel, closed; n=7, S=10; complex topology 1r95 d1r95b_ B:6-21,23-34,36-46,84-92 1r95 d1r95a_ A:6-21,23-34,36-46,84-92 1r94 d1r94a_ A:6-21,23-34,36-46,84-92 1r94 d1r94b_ B:6-21,23-34,36-46,84-92 1s98 d1s98a_ A:6-21,24-34,36-46,86-92 1s98 d1s98b_ B:6-21,23-34,36-46,86-93