| SCOP superfamily ID |
superfamiily description |
corresponding fold description |
| d.228.1 | Replication modulator SeqA, C-terminal DNA-binding domain | Replication modulator SeqA, C-terminal DNA-binding domain consists of seven alpha-helices and three-stranded beta-sheet |
| c.72.2 | MurD-like peptide ligases, catalytic domain has extra strand located between strands 1 and 2 ! | Ribokinase-like core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest ! potential superfamily: members of this fold have similar functions but different ATP-binding sites |
| c.77.1 | Isocitrate/Isopropylmalate dehydrogenase-like the constituent families form similar dimers ! | Isocitrate/Isopropylmalate dehydrogenase-like consists of two intertwined (sub)domains related by pseudo dyad; duplication ! 3 layers: a/b/a; single mixed beta-sheet of 10 strands, order 213A945867 (A=10); strands from 5 to 9 are antiparallel to the rest |
| c.107.1 | DHH phosphoesterases constituent families have similar domain organization with variable interdomain linker and spatial arrangement of the domains ! | DHH phosphoesterases consists of two non-similar domains ! Domain 1 has parallel sheet of 6 strands, order 321456 ! Domain 2 has mixed sheet of 5 strands, order 12345; strands 1 & 4 are antiparallel to the rest |
| c.1.13 | Malate synthase G | TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites |
| c.92.2 | "Helical backbone" metal receptor contains a long alpha helical insertion in the interdomain linker ! | Chelatase-like duplication: tandem repeat of two domains; 3 layers (a/b/a); parallel beta-sheet of 4 strands, order 2134 |
| c.72.1 | Ribokinase-like has extra strand located between strands 2 and 3 ! | Ribokinase-like core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest ! potential superfamily: members of this fold have similar functions but different ATP-binding sites |
| c.80.1 | SIS domain | SIS domain 3 layers: a/b/a; parallel beta-sheet of 5 strands, order 21345 |
| c.23.8 | N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) | Flavodoxin-like 3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345 |
| c.56.8 | Cgl1923-like | Phosphorylase/hydrolase-like core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops |
| d.364.1 | PA1123-like | PA1123-like irregular array of short helices and two three-stranded beta-sheets |
| c.127.1 | F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) the sheet topology is similar to those of the Periplasmic binding protein-like I domains ! | F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) 3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213456 |
| f.33.1 | Calcium ATPase, transmembrane domain M | Calcium ATPase, transmembrane domain M core: multihelical; consists of three transmembrane regions of 2, 2 and 6 helices, separated by cytoplasmic domains |