1. b.6.1 Cupredoxins contains copper-binding site !
Cupredoxin-like sandwich; 7 strands in 2 sheets, greek-key ! variations: some members have additional 1-2 strands
1jxd d1jxda_ A:49-58,67-75,76-83,91-98
1j5d d1j5da_ A:49-58,67-75,76-83,91-98
2q5b d2q5bc1 C:52-61,69-78,83-89,97-104
1j5c d1j5ca_ A:49-58,67-75,77-83,93-98
1pcs d1pcsa_ A:47-57,66-76,79-84,92-99
2q5b d2q5ba1 A:52-60,70-78,83-89,97-104
1baw d1bawc_ C:52-61,70-77,83-89,97-104
1baw d1bawa_ A:52-61,70-77,83-89,97-104
1baw d1bawb_ B:52-61,70-77,83-89,97-104
1nin d1nina_ A:52-61,70-78,82-90,97-105
1fa4 d1fa4a_ A:52-61,69-78,82-89,97-104
1jxf d1jxfa_ A:49-58,67-74,76-84,91-98
2q5b d2q5bb1 B:52-60,70-77,83-89,97-104
2gim d2gimc1 C:52-60,69-77,83-89,97-104
2cj3 d2cj3a1 A:52-60,70-77,83-90,97-104
2gim d2gima1 A:52-60,69-77,83-90,97-104
2cj3 d2cj3b1 B:52-60,68-77,83-89,97-104
1kdi d1kdia_ A:48-60,71-76,80-88,95-102
1kdj d1kdja_ A:48-60,71-76,80-88,95-102
2. d.194.1 CNF1/YfiH-like putative cysteine hydrolases
CNF1/YfiH-like putative cysteine hydrolases 4 layers: alpha/beta/beta/alpha; mixed beta sheets
1rv9 d1rv9a_ A:88-96,100-105,109-116,247-255
3. c.2.1 NAD(P)-binding Rossmann-fold domains
NAD(P)-binding Rossmann-fold domains core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456 ! The nucleotide-binding modes of this and the next two folds/superfamilies are similar
2gyy d2gyya1 A:12-25,30-36,43-48,49-54
1xcb d1xcbg2 G:89-98,104-112,118-123,124-128
1xcb d1xcbd2 D:89-98,104-112,118-123,124-128
1xcb d1xcbf2 F:89-98,104-112,118-123,124-128
1xcb d1xcba2 A:89-98,104-112,118-123,124-128
1xcb d1xcbb2 B:89-98,104-112,118-123,124-128
2dt5 d2dt5a2 A:89-98,104-112,118-123,124-128
2dt5 d2dt5b2 B:89-98,104-112,118-123,124-128
2hjs d2hjsa1 A:14-28,32-38,43-50,51-57
2gz3 d2gz3d1 D:12-25,30-36,41-48,49-55
1pjl d1pjld1 D:3429-3438,3440-3446,3451-3455,3457-3461
2gz3 d2gz3c1 C:12-25,30-36,41-48,49-55
1pjl d1pjlh1 H:7429-7438,7440-7446,7450-7455,7457-7462
2gz1 d2gz1b1 B:12-25,30-36,41-48,49-55
2gz3 d2gz3a1 A:12-25,30-36,41-48,49-55
1pjl d1pjlg1 G:6429-6438,6440-6446,6451-6455,6457-6461
1gq2 d1gq2i1 I:429-438,440-446,451-455,457-461
1gq2 d1gq2l1 L:429-438,440-446,451-455,457-461
1gq2 d1gq2j1 J:429-438,440-446,451-455,457-461
1gq2 d1gq2c1 C:429-438,440-446,451-455,457-461
1gq2 d1gq2f1 F:429-438,440-446,451-455,457-461
1efl d1efla1 A:429-438,440-446,451-455,457-461
1gq2 d1gq2d1 D:429-438,440-446,451-455,457-461
1efk d1efka1 A:429-438,440-446,451-455,457-461
1gq2 d1gq2p1 P:429-438,440-446,451-455,457-461
1pjl d1pjlc1 C:2429-2438,2440-2446,2451-2455,2457-2461
1pjl d1pjlf1 F:5429-5438,5440-5446,5451-5455,5457-5461
1gq2 d1gq2g1 G:429-438,440-446,451-455,457-461
2gyy d2gyyd1 D:12-25,30-35,42-48,49-55
1gz3 d1gz3d1 D:429-438,440-446,451-455,457-461
1gq2 d1gq2n1 N:429-438,440-446,451-455,457-461
1gq2 d1gq2m1 M:429-438,440-446,451-455,457-461
1gq2 d1gq2a1 A:429-438,440-446,451-455,457-461
1gq2 d1gq2o1 O:429-438,440-446,451-455,457-461
1gq2 d1gq2h1 H:429-438,440-446,451-455,457-461
1gq2 d1gq2k1 K:429-438,440-446,451-455,457-461
1pjl d1pjlb1 B:1429-1438,1440-1446,1450-1455,1456-1462
1gq2 d1gq2e1 E:429-438,440-446,451-455,457-461
1efl d1eflc1 C:429-438,440-446,451-455,457-461
1gz3 d1gz3a1 A:429-438,440-446,451-455,457-461
1efl d1eflb1 B:429-438,440-446,451-455,457-461
1llq d1llqa1 A:442-451,453-459,464-468,469-473
1gq2 d1gq2b1 B:429-438,440-446,451-455,457-461
1gz3 d1gz3b1 B:429-438,440-446,451-455,457-461
1gz4 d1gz4d1 D:429-438,440-446,451-455,457-461
1gz3 d1gz3c1 C:429-438,440-446,451-455,457-461
1pj4 d1pj4d1 D:3429-3438,3440-3446,3451-3455,3457-3461
1pj4 d1pj4a1 A:429-438,440-446,451-455,457-461
1pj2 d1pj2a1 A:429-438,440-446,451-455,457-461
1o0s d1o0sa1 A:442-451,453-459,464-468,469-473
1pjl d1pjle1 E:4429-4438,4440-4446,4451-4455,4457-4461
1pj2 d1pj2d1 D:3429-3438,3440-3446,3451-3455,3457-3461
1gz4 d1gz4a1 A:429-438,440-446,451-455,457-461
1efl d1efld1 D:429-438,440-446,451-455,457-461
1pj2 d1pj2c1 C:2429-2438,2440-2446,2451-2455,2457-2461
1efk d1efkb1 B:429-438,440-446,451-455,457-461
1efk d1efkd1 D:429-438,440-446,451-455,457-461
1pj3 d1pj3d1 D:3429-3438,3440-3446,3451-3455,3457-3461
1pj3 d1pj3b1 B:1429-1438,1440-1446,1451-1455,1457-1461
1pj3 d1pj3a1 A:429-438,440-446,451-455,457-461
1llq d1llqb1 B:442-451,453-459,464-468,469-473
1gz4 d1gz4b1 B:429-438,440-446,451-455,457-461
1qr6 d1qr6a1 A:429-438,440-446,451-455,457-461
1pj4 d1pj4c1 C:2429-2438,2440-2446,2451-2455,2457-2461
1pj4 d1pj4b1 B:1429-1438,1440-1446,1451-1455,1457-1461
1gz4 d1gz4c1 C:429-438,440-446,451-455,457-461
1do8 d1do8a1 A:429-438,440-446,451-455,457-461
1pj2 d1pj2b1 B:1429-1438,1440-1446,1451-1455,1457-1461
1gl3 d1gl3b1 B:11-25,30-35,42-48,49-54
1qr6 d1qr6b1 B:1429-1438,1440-1446,1451-1455,1457-1461
1o0s d1o0sb1 B:442-451,453-459,464-468,469-473
1iul d1iula_ A:27-40,41-47,51-56,57-61
1efk d1efkc1 C:429-438,440-446,451-455,457-461
1pj3 d1pj3c1 C:2429-2438,2440-2446,2451-2455,2457-2461
1iuk d1iuka_ A:27-40,41-47,51-56,57-61
1pjl d1pjla1 A:429-438,440-446,451-455,456-461
2gyy d2gyyc1 C:12-25,30-35,42-47,50-55
4. b.113.1 N-terminal domain of MutM-like DNA repair proteins
N-terminal domain of MutM-like DNA repair proteins pseudobarrel; capped on both ends by alpha-helices
2oq4 d2oq4a2 A:29-40,61-67,88-95,97-104
1k3x d1k3xa2 A:29-40,61-67,88-95,97-104
1k3w d1k3wa2 A:29-40,61-67,88-95,97-104
2ea0 d2ea0a2 A:29-40,61-67,88-95,97-104
2opf d2opfa2 A:29-40,61-67,88-95,97-104
1q39 d1q39a2 A:29-40,61-67,88-95,97-104
1q3c d1q3ca2 A:29-40,61-67,88-95,97-104
1q3b d1q3ba2 A:29-40,61-67,88-95,97-104
5. d.153.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) N-terminal residue provides two catalytic groups, nucleophile and proton donor !
Ntn hydrolase-like 4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
3pva d3pvad_ D:101-113,125-129,141-149,151-160
3pva d3pvab_ B:101-113,125-129,141-149,151-160
3pva d3pvag_ G:101-113,125-129,141-149,151-160
3pva d3pvaa_ A:101-113,125-129,141-149,151-160
3pva d3pvah_ H:101-113,125-129,141-149,151-160
3pva d3pvaf_ F:101-113,125-129,141-149,151-160
3pva d3pvae_ E:101-113,125-129,141-149,151-160
3pva d3pvac_ C:101-113,125-129,141-149,151-160
2pva d2pvaa_ A:101-113,125-129,141-149,151-160
2pva d2pvad_ D:101-113,125-130,141-149,151-160
2pva d2pvac_ C:101-113,125-130,141-149,151-160
2pva d2pvab_ B:101-113,126-130,141-149,152-160
6. b.38.1 Sm-like ribonucleoproteins
Sm-like fold core: barrel, open; n*=4, S*=8; meander; SH3-like topology
1m5q d1m5qn_ N:12-20,22-29,45-51,61-67
1m5q d1m5q2_ 2:12-20,22-29,45-51,61-67
1m5q d1m5qy_ Y:12-20,22-29,45-51,61-67
1m5q d1m5qw_ W:12-20,22-29,45-51,61-67
1m5q d1m5qm_ M:12-20,22-29,45-51,61-67
1m5q d1m5qi_ I:12-20,22-29,45-51,61-67
1m5q d1m5qh_ H:12-20,22-29,45-51,61-67
1m5q d1m5q1_ 1:12-20,22-29,45-51,61-67
1m5q d1m5qv_ V:12-20,22-29,45-51,61-67
1m5q d1m5qz_ Z:12-20,22-29,45-51,61-67
1m5q d1m5qj_ J:12-20,22-29,45-51,61-67
1m5q d1m5ql_ L:12-20,22-29,45-51,61-67
1m5q d1m5qk_ K:12-20,22-29,45-51,61-67
1m5q d1m5qx_ X:12-20,22-29,45-51,61-67
1m5q d1m5qq_ Q:12-20,22-29,45-51,61-67
1h64 d1h64l_ L:4-13,14-21,38-44,58-64
1m5q d1m5qt_ T:12-20,22-29,45-51,61-67
1m5q d1m5qf_ F:12-20,22-29,45-51,61-67
1m5q d1m5qr_ R:12-20,22-29,45-51,61-67
1m5q d1m5qa_ A:12-20,22-29,45-51,61-67
1h64 d1h64o_ O:4-13,14-22,38-44,58-64
1h64 d1h64p_ P:4-13,14-22,38-44,58-64
1h64 d1h64z_ Z:4-13,14-21,38-44,58-64
1h64 d1h64j_ J:4-13,14-22,38-44,58-64
1m5q d1m5qp_ P:12-20,22-29,45-51,61-67
1m8v d1m8vb_ B:204-213,214-222,238-244,258-264
1m5q d1m5qo_ O:12-20,22-29,45-51,61-67
1h64 d1h64a_ A:4-13,14-22,38-44,58-64
1m5q d1m5qc_ C:12-20,22-29,45-51,61-67
1m5q d1m5qb_ B:12-20,22-29,45-51,61-67
1h64 d1h64w_ W:4-13,14-22,38-44,58-64
1m5q d1m5qg_ G:12-20,22-29,45-51,61-67
1h64 d1h64k_ K:4-13,14-22,38-44,58-64
1m5q d1m5qs_ S:12-20,22-29,45-51,61-67
1h64 d1h64t_ T:4-13,14-22,38-44,58-64
1m5q d1m5qu_ U:12-20,22-29,45-51,61-67
1h64 d1h64c_ C:4-13,14-22,38-44,58-64
1h64 d1h64g_ G:4-13,14-22,38-44,58-64
1h64 d1h64b_ B:4-13,14-21,38-44,58-64
1m5q d1m5qe_ E:12-20,22-29,45-51,61-67
1h64 d1h64q_ Q:4-13,14-22,38-44,58-64
1h64 d1h64m_ M:4-13,14-21,38-44,58-64
1m8v d1m8vk_ K:404-413,414-422,438-444,458-464
1h64 d1h64u_ U:4-13,14-22,38-44,58-64
1m5q d1m5qd_ D:12-20,22-29,45-51,61-67
1m8v d1m8vf_ F:604-613,614-622,638-644,658-664
1m8v d1m8vc_ C:304-313,314-322,338-344,358-364
1h64 d1h64x_ X:4-13,14-22,38-44,58-64
1h64 d1h64n_ N:4-13,14-22,38-44,58-64
1m8v d1m8vi_ I:204-213,214-222,238-244,258-264
1m8v d1m8vj_ J:304-313,314-322,338-344,358-364
1h64 d1h64v_ V:4-13,14-22,38-44,58-64
1h64 d1h64y_ Y:4-13,14-22,38-44,58-64
1m8v d1m8vl_ L:504-513,514-522,538-544,558-564
1h64 d1h64d_ D:4-13,14-22,38-44,58-64
1m8v d1m8ve_ E:504-513,514-522,538-544,558-564
1h64 d1h64e_ E:4-13,14-22,38-44,58-64
1m8v d1m8vn_ N:704-713,714-722,738-744,758-764
1h64 d1h64s_ S:4-13,14-22,38-44,58-64
1h64 d1h64h_ H:4-13,14-22,38-44,58-64
1i4k d1i4kv_ V:4-13,15-22,38-44,58-64
1i4k d1i4kj_ J:4-13,14-22,38-44,58-64
1i4k d1i4kx_ X:4-13,15-22,38-44,58-64
1m8v d1m8vd_ D:404-413,414-422,438-444,458-464
1i8f d1i8fg_ G:13-20,22-29,45-51,64-70
1i4k d1i4kl_ L:4-13,15-22,38-44,58-64
1i5l d1i5ld_ D:4-13,15-22,38-44,58-64
1i4k d1i4kc_ C:4-13,15-22,38-44,58-64
1i4k d1i4ke_ E:4-13,15-22,38-44,58-64
1i5l d1i5la_ A:4-13,15-22,38-44,58-64
1i4k d1i4kg_ G:4-13,15-22,38-44,58-64
1i5l d1i5lg_ G:4-13,15-22,38-44,58-64
1i4k d1i4kd_ D:4-13,14-22,38-44,58-64
1d3b d1d3ba_ A:5-14,16-23,39-45,59-65
1d3b d1d3bi_ I:5-14,16-23,39-45,59-65
1jbm d1jbma_ A:13-22,24-31,47-53,67-73
1i4k d1i4ka_ A:4-13,14-22,38-44,58-64
1i5l d1i5ln_ N:4-13,15-22,38-44,58-64
1i5l d1i5lj_ J:4-13,15-22,38-44,58-64
1i4k d1i4kf_ F:4-13,15-22,38-44,58-64
1i5l d1i5lh_ H:4-13,14-22,38-44,58-64
1i5l d1i5li_ I:4-13,15-22,38-44,58-64
1i5l d1i5lf_ F:4-13,15-22,38-44,58-64
1i5l d1i5ll_ L:4-13,14-22,38-44,58-64
1i5l d1i5lm_ M:4-13,15-22,38-44,58-64
1i5l d1i5lc_ C:4-13,15-22,38-44,58-64
1d3b d1d3be_ E:5-14,16-23,39-45,59-65
1i4k d1i4k2_ 2:4-13,15-22,38-44,58-64
1d3b d1d3bg_ G:5-14,15-23,39-45,59-65
1i8f d1i8fb_ B:9-20,22-29,45-51,64-70
1d3b d1d3bc_ C:5-14,16-23,39-45,59-65
1b34 d1b34a_ A:2-11,11-20,36-42,56-62
1i4k d1i4kz_ Z:4-13,15-22,38-44,58-64
1i5l d1i5le_ E:4-13,15-22,38-44,58-64
1jri d1jrin_ N:13-22,23-31,47-53,67-73
1jri d1jrig_ G:13-22,23-31,47-53,67-73
1jbm d1jbme_ E:13-22,24-31,47-53,67-73
1i4k d1i4kb_ B:4-13,14-22,38-44,58-64
1ljo d1ljoa_ A:5-14,16-23,40-46,60-66
1jri d1jrij_ J:13-22,23-31,47-53,67-73
1jbm d1jbmg_ G:13-22,24-31,47-53,67-73
1i4k d1i4kh_ H:4-13,15-22,38-44,58-64
1i8f d1i8fd_ D:9-20,22-29,45-51,64-70
1jri d1jrih_ H:13-22,23-31,47-53,67-73
1i8f d1i8fa_ A:11-20,22-29,45-51,64-70
1i5l d1i5lb_ B:3-13,15-22,38-44,58-64
1jri d1jrid_ D:13-22,24-31,47-53,67-73
1jri d1jrim_ M:13-22,24-31,47-53,67-73
1i8f d1i8fe_ E:11-20,22-29,45-51,64-70
1i8f d1i8ff_ F:8-20,21-29,45-51,64-70
1loj d1lojb_ B:13-22,24-31,47-53,67-73
1loj d1lojk_ K:13-22,23-31,47-53,67-73
1loj d1loje_ E:13-22,24-31,47-53,67-73
1loj d1lojh_ H:13-22,23-31,47-53,67-73
1loj d1lojj_ J:13-22,24-31,47-53,67-73
1loj d1lojn_ N:13-22,24-31,47-53,67-73
1lnx d1lnxf_ F:10-20,22-29,45-50,64-70
1loj d1loja_ A:13-22,23-31,47-52,67-73
1lnx d1lnxg_ G:10-20,22-29,45-51,64-70
1lnx d1lnxc_ C:10-20,22-29,45-51,64-70
1lnx d1lnxd_ D:10-20,22-29,45-51,64-70
1lnx d1lnxa_ A:10-20,22-29,45-51,64-70
1lnx d1lnxe_ E:10-20,22-29,45-51,64-70
1lnx d1lnxb_ B:10-20,22-29,45-51,64-70
7. e.62.1 Heme iron utilization protein-like
Heme iron utilization protein-like 2 domains; d1 - 3-helical bundle similar to the homeodomain-like fold; d2 - 6-stranded beta-barrel capped by two helices at one end, similar topology to the PH-like fold
2j0r d2j0ra1 A:225-240,241-250,268-275,276-283
2j0p d2j0pa1 A:225-240,242-250,268-275,276-283
2hq2 d2hq2a1 A:222-237,239-247,265-272,273-279
1u9t d1u9ta1 A:222-237,239-247,265-272,273-280
8. d.15.4 2Fe-2S ferredoxin-like
beta-Grasp (ubiquitin-like) core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
1dox d1doxa_ A:23-32,50-56,61-67,76-80
9. b.137.1 Rof/RNase P subunit-like
Rof/RNase P subunit-like core: barrel, open; n*=4, S*=8; meander; SH3-like topology; some similarity to the Sm-like fold
1sg5 d1sg5a1 A:12-25,26-33,50-59,60-67
10. b.47.1 Trypsin-like serine proteases
Trypsin-like serine proteases barrel, closed; n=6, S=8; greek-key ! duplication: consists of two domains of the same fold
1qa7 d1qa7a_ A:42-49,152-159,184-196,197-204
1hav d1hava_ A:42-49,151-159,184-196,197-204
2cxv d2cxva1 A:42-50,150-159,184-196,197-203
1qa7 d1qa7d_ D:42-49,150-159,184-196,197-204
2ijd d2ijd21 2:1-15,22-31,98-106,147-154
1hav d1havb_ B:42-50,152-159,184-196,197-204
2a4o d2a4oa1 A:42-50,150-159,184-196,197-204
2rce d2rceh1 H:47-58,78-86,153-161,201-208
2qf3 d2qf3a1 A:47-58,78-86,153-161,201-208
2h9h d2h9ha1 A:42-50,150-159,184-196,197-204
2h6m d2h6ma1 A:42-50,150-159,184-196,197-204
1arc d1arca_ A:18-25,32-41,142-149,194-201
2hal d2hala1 A:42-50,150-159,184-196,197-204
1cqq d1cqqa_ A:1-15,22-30,98-105,147-154
1qa7 d1qa7c_ C:42-50,152-159,184-195,197-204
2r3y d2r3yb2 B:47-58,78-86,153-161,201-208
1l1n d1l1nb_ B:3-15,22-30,98-106,147-154
2rce d2rceg1 G:47-58,78-86,153-162,201-208
2qf0 d2qf0g1 G:47-58,78-86,153-162,201-208
2ijd d2ijd11 1:1-15,22-30,98-106,147-154
1l1n d1l1na_ A:5-15,22-30,98-106,148-154
2op9 d2op9b1 B:9-17,24-33,109-119,145-153
1y8t d1y8tc2 C:7-19,31-39,115-120,169-176
1y8t d1y8ta2 A:7-19,31-39,117-124,169-176
1hav d1hava_ A:1-13,28-34,114-124,172-181
1uk2 d1uk2b_ B:9-17,24-33,110-119,146-154
2v6n d2v6na1 A:9-17,24-33,110-119,145-154
2qf0 d2qf0e1 E:47-58,77-86,153-161,201-208
2z3e d2z3ea1 A:9-17,24-33,110-119,145-154
2z9i d2z9ic2 C:7-19,30-39,115-124,169-176
2qf0 d2qf0i1 I:47-58,77-85,153-161,201-208
2z94 d2z94a1 A:9-17,24-33,110-119,145-154
1uj1 d1uj1a_ A:9-17,24-33,109-119,145-154
2z9k d2z9kb1 B:9-17,24-33,110-119,145-154
2z3c d2z3ca1 A:9-17,24-33,110-119,145-154
2amp d2ampa1 A:9-17,24-33,109-118,144-153
2vj1 d2vj1b1 B:9-17,24-33,109-119,145-154
1q2w d1q2wb_ B:9-17,24-33,109-119,145-154
2vj1 d2vj1a1 A:9-17,24-33,109-119,145-154
1qa7 d1qa7a_ A:1-13,28-34,114-124,172-181
2z9g d2z9ga1 A:9-17,24-33,109-119,145-154
2z9k d2z9ka1 A:9-17,24-33,109-119,145-154
1p9u d1p9ue_ E:9-17,24-33,109-118,144-153
2z9l d2z9la1 A:9-17,24-33,109-119,145-154
1p9u d1p9uc_ C:9-17,24-33,109-118,144-153
1p9u d1p9ub_ B:9-17,24-33,109-118,144-153
1p9u d1p9uf_ F:9-17,24-33,109-118,144-153
1lvo d1lvob_ B:9-17,24-33,109-118,144-153
1p9u d1p9ua_ A:9-17,24-33,109-118,144-153
1lvo d1lvoa_ A:9-17,24-33,109-118,144-153
1lvo d1lvof_ F:9-17,24-33,109-118,144-153
1lvo d1lvoe_ E:9-17,24-33,109-118,144-153
1lvm d1lvmb_ B:10-18,27-38,105-115,153-159
1lvo d1lvoc_ C:9-17,24-33,109-118,144-153
1hav d1havb_ B:1-13,28-34,114-124,173-181
2amp d2ampb1 B:9-17,24-33,107-118,144-153
1p9s d1p9sa_ A:9-17,24-33,108-118,144-153
1p9u d1p9ud_ D:9-17,24-33,107-118,144-153
1p9s d1p9sb_ B:9-17,24-33,108-118,144-153
1l1j d1l1ja_ A:27-40,139-143,155-162,206-213
1l1j d1l1jb_ B:27-40,139-143,155-162,206-213
1lvm d1lvm.1 A:10-18,27-38,105-116,153-159
1l1j d1l1ja_ A:27-40,77-86,155-162,206-213
1uk2 d1uk2a_ A:9-17,24-33,110-119,147-154
1lvo d1lvod_ D:10-17,24-33,109-118,146-153
1uj1 d1uj1b_ B:9-17,24-33,110-119,147-154
1lvb d1lvbb_ B:10-18,27-38,107-118,153-159
1uk3 d1uk3a_ A:9-17,24-33,110-119,147-154
2op9 d2op9a1 A:9-17,24-33,110-119,147-154
2rce d2rcee1 E:47-58,73-86,153-161,201-208
1q2w d1q2wa_ A:9-17,24-33,110-119,147-154
1uk3 d1uk3b_ B:9-17,24-33,110-119,147-154
2z9j d2z9ja1 A:9-17,24-33,110-119,147-154
2z3d d2z3da1 A:9-17,24-33,110-119,147-154
1uk4 d1uk4b_ B:9-17,24-33,109-119,147-154
2duc d2ducb1 B:9-17,24-33,109-119,147-154
2z9l d2z9lb1 B:9-17,24-33,110-119,147-154
2rce d2rcea1 A:47-58,73-86,153-161,201-208
2duc d2duca1 A:9-17,24-33,109-119,147-154
2rce d2rcei1 I:47-58,74-85,153-161,201-208
2z9j d2z9jb1 B:9-17,24-33,109-119,147-154
1qa7 d1qa7c_ C:1-13,25-34,113-124,172-181
2r3y d2r3yc2 C:47-58,73-86,151-161,201-208
1qa7 d1qa7d_ D:1-13,25-34,115-124,172-181
2qf0 d2qf0c1 C:47-58,73-86,153-161,201-208
1uk4 d1uk4a_ A:9-17,24-33,109-119,147-154
1lvb d1lvba_ A:10-18,27-38,107-118,151-159
2rce d2rceb1 B:47-58,74-85,153-162,201-208
2qf0 d2qf0b1 B:47-58,73-86,153-161,201-208
2z9i d2z9ib2 B:4-19,30-39,115-120,169-176
1sot d1sotc2 C:47-58,72-87,153-161,201-208
2qf3 d2qf3c1 C:47-58,72-86,153-161,201-208
1l1j d1l1jb_ B:27-40,76-86,155-162,206-213
2rce d2rcef1 F:47-58,72-86,153-161,201-208
1vcw d1vcwc2 C:47-58,72-86,153-160,201-208
1soz d1sozb2 B:47-58,73-85,153-161,201-208
2r3u d2r3ua1 A:47-58,73-85,153-161,202-208
1vcw d1vcwa2 A:47-58,72-86,151-161,201-208
1vcw d1vcwb2 B:47-58,72-86,151-161,201-208
1sot d1sotb2 B:47-58,72-86,151-161,201-208
2qf0 d2qf0d1 D:47-58,72-86,153-161,201-208
2qf0 d2qf0f1 F:47-58,72-86,153-161,201-208
2j92 d2j92b1 B:7-17,25-36,111-121,163-172
2cxv d2cxva1 A:1-13,22-34,113-124,172-181
2rce d2rced1 D:47-58,72-85,153-161,201-208
1soz d1soza2 A:47-58,72-85,153-161,201-208
2r3y d2r3ya2 A:47-58,72-85,153-161,201-208
2h9h d2h9ha1 A:1-13,22-34,114-124,172-181
2h6m d2h6ma1 A:1-13,22-34,114-124,172-181
2bhg d2bhga1 A:7-17,25-36,111-121,165-172
2a4o d2a4oa1 A:1-13,22-34,114-124,172-181
2hal d2hala1 A:1-13,22-34,114-124,172-181
2rce d2rcec1 C:47-58,71-86,153-161,201-208
1sot d1sota2 A:47-58,72-85,153-161,201-208
2j92 d2j92a1 A:7-16,25-36,111-121,165-172
1soz d1sozc2 C:47-58,70-86,152-161,201-208
1qa7 d1qa7b_ B:1-13,23-34,115-124,174-181
1te0 d1te0a2 A:47-58,70-87,153-161,201-208
1lcy d1lcya2 A:15-28,41-55,121-128,173-180
11. b.7.2 Periplasmic chaperone C-domain
C2 domain-like sandwich; 8 strands in 2 sheets; greek-key
1l4i d1l4ib2 B:123-130,140-145,148-158,164-169
1bf8 d1bf8a2 A:123-131,138-146,150-158,159-167
1qun d1qunm2 M:123-131,138-146,149-158,164-168
1qun d1quni2 I:123-131,138-146,149-158,164-168
1qun d1quno2 O:123-131,138-146,149-158,164-168
1qun d1qunk2 K:123-131,138-146,149-158,164-168
1kiu d1kiuc2 C:123-131,138-146,149-158,164-168
1kiu d1kiue2 E:123-131,138-146,149-158,164-168
1kiu d1kiug2 G:123-131,138-146,149-158,164-168
1kiu d1kiua2 A:123-131,138-146,149-158,164-168
1klf d1klfg2 G:123-131,138-146,149-158,164-168
1klf d1klfc2 C:123-131,138-146,149-158,164-168
1klf d1klfe2 E:123-131,138-146,149-158,164-168
1klf d1klfa2 A:123-131,138-146,149-158,164-168
1qun d1qune2 E:123-131,138-146,149-158,164-168
1qun d1qunc2 C:123-131,138-146,149-158,164-168
1qun d1qung2 G:123-131,138-146,149-158,164-168
1qun d1quna2 A:123-131,138-146,149-158,164-168
1klf d1klfm2 M:123-131,138-146,149-158,164-168
1klf d1klfk2 K:123-131,138-146,149-158,164-168
1klf d1klfo2 O:123-131,138-146,149-158,164-168
1klf d1klfi2 I:123-131,138-146,149-158,164-168
3bwu d3bwuc2 C:123-131,138-146,149-158,164-168
1ze3 d1ze3c2 C:123-131,138-146,149-158,164-168
1l4i d1l4ia2 A:123-131,140-145,148-158,164-169
12. c.67.1 PLP-dependent transferases
PLP-dependent transferase-like main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
3bc8 d3bc8a1 A:172-183,184-190,410-415,416-421
3bcb d3bcba1 A:172-183,184-190,410-415,416-421
3bca d3bcaa1 A:172-183,184-190,410-415,416-421
13. b.29.1 Concanavalin A-like lectins/glucanases
Concanavalin A-like lectins/glucanases sandwich; 12-14 strands in 2 sheets; complex topology
2sli d2slia1 A:105-114,116-126,134-139,146-155
1sli d1slia1 A:105-114,116-126,134-139,146-155
4sli d4slia1 A:105-114,116-126,134-139,146-155
2d43 d2d43a1 A:73-82,84-93,132-142,301-307
1sll d1slla1 A:105-114,116-126,135-139,146-155
3sli d3slia1 A:105-114,116-126,135-139,146-155
14. d.261.1 Hypothetical protein PH1602
Hypothetical protein PH1602 complex alpha+beta fold; contains a region of similarity to the ferredoxin-like fold
1uc2 d1uc2b_ B:42-53,71-75,75-82,341-352
1uc2 d1uc2a_ A:42-53,71-75,75-82,341-352
15. i.1.1 Ribosome and ribosomal fragments
Ribosome and ribosomal fragments
1p87 d1p87s_ S:11-25,29-33,35-40,66-71
1p6g d1p6gs_ S:11-25,29-33,35-40,66-71
2zkq d2zkqs1 S:54-68,75-79,81-86,112-117
16. d.28.1 Ribosomal protein S19
Ribosomal protein S19 alpha-beta-X-beta(2); 2 layers: alpha/beta; mixed beta-sheet, order: 123
1fjg d1fjgs_ S:12-26,30-34,36-41,67-72
2qb9 d2qb9s1 S:11-25,29-33,36-40,66-71
2qbb d2qbbs1 S:11-25,29-33,36-40,66-71
2vho d2vhos1 S:11-25,29-33,36-41,66-71
17. b.136.1 SspB-like
SspB-like core: barrel, open; n*=4, S*=8; meander; SH3-like topology; some similarity to the Sm-like fold
1yfn d1yfnc1 C:8-25,27-34,68-77,78-87
1ox9 d1ox9f_ F:8-25,27-34,68-77,78-87
1ox9 d1ox9a_ A:8-25,27-34,68-77,78-87
1yfn d1yfnd1 D:8-25,27-34,68-77,78-87
1yfn d1yfnb1 B:8-25,27-34,68-77,78-87
1yfn d1yfna1 A:8-25,27-34,68-77,78-87
1zsz d1zszc1 C:7-24,25-33,67-76,77-86
1ou8 d1ou8b_ B:7-24,25-33,67-76,77-86
1ox9 d1ox9c_ C:8-25,27-34,68-77,78-87
1ox8 d1ox8a_ A:8-25,27-34,68-77,78-87
1ox9 d1ox9h_ H:8-25,27-34,68-77,78-87
1ox9 d1ox9g_ G:8-25,27-34,68-77,78-87
1ox9 d1ox9d_ D:8-25,27-34,68-77,78-87
1ox9 d1ox9e_ E:8-25,27-34,68-77,78-87
1ox8 d1ox8b_ B:8-25,27-34,68-77,78-87
1twb d1twba_ A:7-24,26-33,67-76,77-86
1ox9 d1ox9b_ B:8-25,27-34,68-77,78-87
1ou9 d1ou9a_ A:7-24,26-33,67-76,77-86
1ou8 d1ou8a_ A:7-24,26-33,67-76,77-86
1zsz d1zszb1 B:7-24,26-33,67-76,77-86
1twb d1twbb_ B:7-24,26-33,67-76,77-86
1ou9 d1ou9b_ B:7-24,26-33,67-76,77-86
1zsz d1zsza1 A:7-24,26-33,67-76,77-86
1ou9 d1ou9c_ C:7-24,26-33,67-76,77-86
1oul d1oula_ A:7-24,26-33,67-76,77-86
1oul d1oulb_ B:7-24,26-33,67-76,77-86
2nys d2nysa1 A:7-31,38-45,80-89,90-98
2nys d2nysb1 B:7-31,38-45,80-89,90-98
18. b.70.1 Quinoprotein alcohol dehydrogenase-like
8-bladed beta-propeller consists of eight 4-stranded beta-sheet motifs; meander ! also found in some members of the WD40-repeat superfamily
1flg d1flgb_ B:4-11,113-117,166-175,184-192
1flg d1flga_ A:4-11,113-117,166-175,184-192
2ad6 d2ad6a1 A:1-11,111-115,161-166,176-184
2ad6 d2ad6c1 C:1-11,111-115,161-166,176-184
2ad7 d2ad7c1 C:1-11,111-115,161-166,176-184
2ad7 d2ad7a1 A:1-11,111-115,161-166,176-184
4aah d4aahc_ C:1-11,111-115,161-166,176-184
2ad8 d2ad8c1 C:1-11,111-115,161-166,176-184
2ad8 d2ad8a1 A:1-11,111-115,161-166,176-184
1g72 d1g72c_ C:1-11,111-115,161-166,176-184
1g72 d1g72a_ A:1-11,111-115,161-166,176-184
19. d.67.1 ThrRS/AlaRS common domain putative editing domain found in the N-terminal part of ThrRS, the C-terminal of AlaRS, and as a stand-alone protein; probable circular permutation of LuxS (
RRF/tRNA synthetase additional domain-like core: alpha-beta(2)-alpha-beta(2); 2 layers: alpha/beta
1tke d1tkea2 A:64-88,90-99,169-176,177-182
1tje d1tjea2 A:64-88,90-99,169-176,177-182
1tky d1tkya2 A:64-88,90-99,169-176,177-182
1nyq d1nyqa3 A:66-89,91-101,169-175,176-181
1qf6 d1qf6a3 A:64-88,90-99,169-176,177-181
1tkg d1tkga2 A:64-88,90-99,169-176,177-182
1nyr d1nyrb3 B:66-90,92-101,170-175,176-180
1nyr d1nyra3 A:66-90,92-101,168-175,176-181
1nyq d1nyqb3 B:66-88,93-101,169-175,176-180
20. d.104.1 Class II aaRS and biotin synthetases
Class II aaRS and biotin synthetases contains large mixed beta-sheet
2c8m d2c8mc1 C:13-28,34-40,42-49,75-83
2c7i d2c7ia1 A:13-28,34-40,42-49,75-83
2c8m d2c8ma1 A:13-28,34-40,42-49,75-83
2c7i d2c7ib1 B:13-28,34-40,42-49,75-83
2ars d2arsa1 A:13-28,34-40,42-49,75-83
2c7i d2c7ic1 C:13-29,34-40,42-49,75-83
2c8m d2c8mb1 B:13-29,34-40,42-49,75-83
2art d2arta1 A:13-29,34-40,42-49,75-83
2aru d2arua1 A:13-29,34-40,42-49,75-83
2p0l d2p0la1 A:25-44,46-55,56-61,92-97
1w66 d1w66a1 A:21-39,42-50,50-56,79-85
2p5i d2p5ia1 A:28-46,50-56,58-64,95-101
21. d.145.1 FAD-binding/transporter-associated domain-like
FAD-binding/transporter-associated domain-like consists of two alpha+beta subdomains
1n62 d1n62c2 C:13-25,27-32,134-141,164-174
1zxi d1zxic2 C:13-25,27-32,134-141,164-174
1n62 d1n62f2 F:13-25,27-32,134-141,164-174
1n60 d1n60c2 C:13-25,27-32,134-141,164-174
1zxi d1zxif2 F:13-25,27-32,134-141,164-174
1n60 d1n60f2 F:13-25,27-32,134-141,164-174
1n63 d1n63c2 C:13-25,27-32,134-141,164-174
1n61 d1n61f2 F:13-25,27-32,134-141,164-174
1n63 d1n63f2 F:13-25,27-32,134-141,164-174
1n61 d1n61c2 C:13-25,27-32,134-141,164-174
1n5w d1n5wc2 C:13-25,27-32,134-141,164-174
1n5w d1n5wf2 F:13-25,27-32,134-141,164-174
1w1r d1w1ra2 A:77-91,97-102,198-206,232-242
1w1q d1w1qa2 A:77-91,97-102,198-206,232-242
1w1o d1w1oa2 A:77-91,97-102,198-206,232-242
1w1j d1w1ja2 A:79-94,96-102,197-205,260-269
1w1k d1w1ka2 A:79-94,96-102,197-205,260-269
2vao d2vaoa2 A:79-94,96-102,197-205,260-269
2vao d2vaob2 B:79-94,96-102,197-205,260-269
1e0y d1e0ya2 A:79-94,96-102,197-205,260-269
1e0y d1e0yb2 B:79-94,96-102,197-205,260-269
1w1l d1w1la2 A:79-94,96-102,197-205,260-269
1w1s d1w1sa2 A:77-92,97-102,198-206,232-242
1e8h d1e8ha2 A:79-94,96-102,197-205,260-269
1w1l d1w1lb2 B:79-94,96-102,197-205,260-269
1e8h d1e8hb2 B:79-94,96-102,197-205,260-269
1w1m d1w1ma2 A:79-94,96-102,197-205,260-269
1w1m d1w1mb2 B:79-94,96-102,197-205,260-269
1e8f d1e8fa2 A:79-94,96-102,197-205,260-269
1dzn d1dzna2 A:79-94,96-102,197-205,260-269
1qlt d1qlta2 A:79-94,96-102,197-205,260-269
1qlu d1qlua2 A:79-94,96-102,197-205,260-269
1dzn d1dznb2 B:79-94,96-102,197-205,260-269
1w1k d1w1kb2 B:79-94,96-102,197-205,260-269
1e8g d1e8gb2 B:79-94,96-102,197-205,260-269
1vao d1vaoa2 A:79-94,96-102,197-205,260-269
1vao d1vaob2 B:79-94,96-102,197-205,260-269
1qlt d1qltb2 B:79-94,96-102,197-205,260-269
1qlu d1qlub2 B:79-94,96-102,197-205,260-269
1e8g d1e8ga2 A:79-94,96-102,197-205,260-269
1e8f d1e8fb2 B:79-94,96-102,197-205,260-269
1w1j d1w1jb2 B:79-94,96-102,197-205,260-269
1rm6 d1rm6b2 B:14-25,26-31,172-179,204-214
1ahu d1ahua2 A:79-94,96-102,197-205,260-269
1ahu d1ahub2 B:79-94,96-102,197-205,260-269
1sb3 d1sb3b2 B:14-25,26-31,172-179,204-214
1sb3 d1sb3e2 E:14-25,26-31,172-179,204-214
1rm6 d1rm6e2 E:14-25,26-31,172-179,204-214
1wvf d1wvfa2 A:66-81,83-89,182-190,229-238
1ahz d1ahzb2 B:79-94,96-102,197-205,260-269
1ahz d1ahza2 A:79-94,96-102,197-205,260-269
1ahv d1ahva2 A:79-94,96-102,197-205,260-269
1ahv d1ahvb2 B:79-94,96-102,197-205,260-269
1dii d1diib2 B:66-81,83-89,182-190,229-238
1dii d1diia2 A:66-81,83-89,182-190,229-238
1wve d1wvea2 A:66-81,83-89,182-190,229-238
1wve d1wveb2 B:66-81,83-89,182-190,229-238
1diq d1diqb2 B:66-81,83-89,182-190,229-238
1diq d1diqa2 A:66-81,83-89,182-190,229-238
1jrp d1jrpe4 E:185-197,199-203,303-310,334-342
1jrp d1jrpa4 A:185-197,199-203,303-310,334-342
2vao d2vaoa2 A:79-94,118-124,197-205,260-269
2vao d2vaob2 B:79-94,118-124,197-205,260-269
1jrp d1jrpc4 C:185-197,199-203,303-310,334-342
1jro d1jroa4 A:185-197,199-203,303-310,334-342
1jro d1jroc4 C:185-197,199-203,303-310,334-342
1jrp d1jrpg4 G:185-197,199-203,303-310,334-342
1jro d1jrog4 G:185-197,199-203,303-310,334-342
1jro d1jroe4 E:185-197,199-203,303-310,334-342
2q85 d2q85a1 A:25-40,42-47,132-142,170-182
1w1j d1w1ja2 A:79-94,118-124,197-205,260-269
1qlu d1qlua2 A:79-94,118-124,197-205,260-269
1e8f d1e8fa2 A:79-94,118-124,197-205,260-269
1w1k d1w1ka2 A:79-94,118-124,197-205,260-269
1qlu d1qlub2 B:79-94,118-124,197-205,260-269
1w1m d1w1ma2 A:79-94,118-124,197-205,260-269
1w1l d1w1lb2 B:79-94,118-124,197-205,260-269
1w1m d1w1mb2 B:79-94,118-124,197-205,260-269
1e8f d1e8fb2 B:79-94,118-124,197-205,260-269
1qlt d1qlta2 A:79-94,118-124,197-205,260-269
1e0y d1e0yb2 B:79-94,118-124,197-205,260-269
1mbb d1mbba1 A:25-40,42-47,132-142,170-182
1qlt d1qltb2 B:79-94,118-124,197-205,260-269
1w1k d1w1kb2 B:79-94,118-124,197-205,260-269
1w1j d1w1jb2 B:79-94,118-124,197-205,260-269
1e0y d1e0ya2 A:79-94,118-124,197-205,260-269
1ahu d1ahub2 B:79-94,118-124,197-205,260-269
1ahu d1ahua2 A:79-94,118-124,197-205,260-269
1dzn d1dzna2 A:79-94,118-124,197-205,260-269
1w1l d1w1la2 A:79-94,118-124,197-205,260-269
1vao d1vaob2 B:79-94,118-124,197-205,260-269
1vao d1vaoa2 A:79-94,118-124,197-205,260-269
1dzn d1dznb2 B:79-94,118-124,197-205,260-269
1ahz d1ahza2 A:79-94,118-124,197-205,260-269
1wvf d1wvfa2 A:66-81,105-111,182-190,229-238
1hsk d1hska1 A:57-72,74-79,162-171,197-206
1wve d1wvea2 A:66-81,105-111,182-190,229-238
1dii d1diia2 A:66-81,105-111,182-190,229-238
1wve d1wveb2 B:66-81,105-111,182-190,229-238
1dii d1diib2 B:66-81,105-111,182-190,229-238
1n62 d1n62c2 C:13-25,49-54,134-141,164-174
1w1q d1w1qa2 A:77-91,114-121,198-206,232-242
1w1r d1w1ra2 A:77-91,114-121,198-206,232-242
1n62 d1n62f2 F:13-25,49-54,134-141,164-174
1w1o d1w1oa2 A:77-91,114-121,198-206,232-242
1n60 d1n60c2 C:13-25,49-54,134-141,164-174
1n60 d1n60f2 F:13-25,49-54,134-141,164-174
1w1s d1w1sa2 A:77-92,114-121,198-206,232-242
1n63 d1n63f2 F:13-25,49-54,134-141,164-174
1zxi d1zxif2 F:13-25,49-54,134-141,164-174
1zxi d1zxic2 C:13-25,49-54,134-141,164-174
1n61 d1n61f2 F:13-25,49-54,134-141,164-174
1n61 d1n61c2 C:13-25,49-54,134-141,164-174
1n63 d1n63c2 C:13-25,49-54,134-141,164-174
1t3q d1t3qf2 F:13-25,26-31,133-140,164-173
1n5w d1n5wf2 F:13-25,49-54,134-141,164-174
1n5w d1n5wc2 C:13-25,49-54,134-141,164-174
1t3q d1t3qc2 C:13-25,26-31,133-140,164-173
2q85 d2q85a1 A:25-40,59-67,132-142,170-182
1rm6 d1rm6b2 B:14-25,48-53,172-179,204-214
1sb3 d1sb3b2 B:14-25,48-53,172-179,204-214
1sb3 d1sb3e2 E:14-25,48-53,172-179,204-214
1rm6 d1rm6e2 E:14-25,48-53,172-179,204-214
1mbb d1mbba1 A:25-40,59-67,132-142,170-182
1e8h d1e8ha2 A:79-94,116-124,197-205,260-269
1e8h d1e8hb2 B:79-94,116-124,197-205,260-269
1e8g d1e8ga2 A:79-94,116-124,197-205,260-269
1e8g d1e8gb2 B:79-94,116-124,197-205,260-269
1ahz d1ahzb2 B:79-94,116-124,197-205,260-269
1ahv d1ahvb2 B:79-94,116-124,197-205,260-269
1ahv d1ahva2 A:79-94,116-124,197-205,260-269
1diq d1diqb2 B:66-81,103-111,182-190,229-238
1diq d1diqa2 A:66-81,103-111,182-190,229-238
22. b.18.1 Galactose-binding domain-like
Galactose-binding domain-like sandwich; 9 strands in 2 sheets; jelly-roll
2vz1 d2vz1a2 A:26-33,38-42,51-59,122-130
2vz3 d2vz3a2 A:26-33,38-42,51-59,122-130
23. a.102.1 Six-hairpin glycosidases
alpha/alpha toroid multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies
1v7x d1v7xa1 A:310-320,731-742,744-753,754-763
1v7v d1v7va1 A:310-320,731-742,744-753,754-763
24. c.1.8 (Trans)glycosidases
TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites
1ghr d1ghra_ A:205-222,227-234,260-264,265-270
1ghs d1ghsb_ B:204-221,226-233,258-263,264-269
1aq0 d1aq0a_ A:205-222,227-234,260-264,265-270
1aq0 d1aq0b_ B:205-222,227-234,260-264,265-270
1ghs d1ghsa_ A:204-221,226-233,258-263,264-269
25. c.37.1 P-loop containing nucleoside triphosphate hydrolases division into families based on beta-sheet topologies !
P-loop containing nucleoside triphosphate hydrolases 3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
1ofi d1ofic_ C:95-108,251-258,288-294,295-301
1ofi d1ofia_ A:94-108,252-258,288-294,295-301
1ofh d1ofha_ A:95-108,251-258,288-294,295-301
1ofh d1ofhc_ C:95-108,251-258,288-294,295-301
1ofh d1ofhb_ B:95-108,251-258,288-294,295-301
1ofi d1ofib_ B:95-108,251-258,288-294,295-301
1um8 d1um8a_ A:188-200,209-215,247-251,267-271
1yyf d1yyfa1 A:95-116,251-257,287-293,294-300
1yyf d1yyfb1 B:95-116,251-257,287-293,294-300
1e94 d1e94e_ E:95-117,250-257,287-293,294-300
1g4a d1g4af_ F:95-120,251-257,287-293,294-300
1g4a d1g4ae_ E:95-120,251-257,287-293,294-300
1kyi d1kyiu_ U:95-120,251-258,288-293,296-301
1do2 d1do2a_ A:95-120,250-257,287-293,294-300
1g4b d1g4be_ E:95-120,250-257,287-293,294-300
1g4b d1g4bk_ K:95-120,250-257,287-293,294-300
1g3i d1g3ib_ B:95-120,251-258,288-294,295-301
1kyi d1kyiw_ W:95-120,251-258,288-293,296-301
1g3i d1g3iv_ V:95-119,251-258,288-294,295-301
1g3i d1g3ia_ A:95-120,251-258,288-294,295-301
1g3i d1g3ix_ X:95-119,251-258,288-294,295-301
1do0 d1do0e_ E:95-120,250-257,287-293,294-300
1do0 d1do0b_ B:95-120,250-257,287-293,294-300
1g3i d1g3iw_ W:95-120,251-258,288-294,295-301
1do2 d1do2c_ C:95-120,250-257,287-293,294-300
1kyi d1kyia_ A:95-119,251-258,288-294,295-301
1g4b d1g4bl_ L:95-120,250-257,287-293,294-300
1g4b d1g4bf_ F:95-120,250-257,287-293,294-300
1e94 d1e94f_ F:95-120,250-257,287-293,294-300
1kyi d1kyis_ S:95-120,251-258,288-293,296-301
1hqy d1hqye_ E:95-120,250-257,287-293,294-300
1ht1 d1ht1g_ G:95-120,250-257,287-293,294-300
1kyi d1kyif_ F:95-119,251-258,288-294,295-301
1ht2 d1ht2g_ G:95-120,250-257,287-293,294-300
1ht2 d1ht2e_ E:95-120,250-257,287-293,294-300
1ht1 d1ht1e_ E:95-120,250-257,287-293,294-300
1do0 d1do0d_ D:95-120,250-257,287-293,294-300
1kyi d1kyib_ B:95-119,251-258,288-294,295-301
1do0 d1do0a_ A:95-120,250-257,287-293,294-300
1ht1 d1ht1i_ I:95-120,250-257,287-293,294-300
1hqy d1hqyf_ F:95-120,250-257,287-293,294-300
1g41 d1g41a_ A:95-120,251-258,288-294,295-301
1ht2 d1ht2h_ H:95-120,250-257,287-293,294-300
1g3i d1g3is_ S:95-120,251-258,288-294,295-301
1g3i d1g3iu_ U:95-120,251-258,288-294,295-301
1ht1 d1ht1f_ F:95-120,250-257,287-293,294-300
1kyi d1kyix_ X:95-120,251-258,288-293,296-301
1ht2 d1ht2f_ F:95-120,250-257,287-293,294-300
1kyi d1kyit_ T:95-120,251-258,288-293,296-301
1g3i d1g3id_ D:95-120,251-258,288-294,295-301
1kyi d1kyiv_ V:95-120,251-258,288-293,296-301
1kyi d1kyic_ C:95-119,251-258,288-294,295-301
1kyi d1kyie_ E:95-119,251-258,288-294,295-301
1g3i d1g3ie_ E:95-120,251-258,288-294,295-301
1im2 d1im2a_ A:95-121,251-258,288-294,295-301
1kyi d1kyid_ D:95-119,251-258,288-294,295-301
1g3i d1g3it_ T:95-121,251-258,288-294,295-301
1g3i d1g3ic_ C:95-121,251-258,288-294,295-301
1g3i d1g3if_ F:95-122,251-258,288-294,295-301
26. d.58.30 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK common fold is elaborated with additional secondary structures !
Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
1rb0 d1rb0a_ A:65-82,93-102,105-109,110-114
1g4c d1g4cb_ B:265-283,293-302,305-309,310-314
1ex8 d1ex8a_ A:65-81,93-102,105-109,110-114
27. b.110.1 Cloacin translocation domain
Cloacin translocation domain complex fold made of several coiled beta-sheets
2b5u d2b5uc2 C:113-125,130-140,153-161,282-290
28. d.108.1 Acyl-CoA N-acyltransferases (Nat)
Acyl-CoA N-acyltransferases (Nat) 3 layers: a/b/a; contains mixed beta-sheet
2cxa d2cxaa1 A:34-45,46-50,138-150,151-161
29. e.8.1 DNA/RNA polymerases "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain !
DNA/RNA polymerases divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
1cez d1ceza_ A:205-225,226-233,743-752,754-763
1qln d1qlna_ A:205-225,226-233,743-752,754-763
2pi4 d2pi4a1 A:205-225,226-233,743-752,754-763
2pi5 d2pi5a1 A:205-225,226-233,743-752,754-763
30. e.60.1 Thermophilic metalloprotease-like
Thermophilic metalloprotease-like consists of two domains; d1: alpha/beta (3 layers, a/b/a; parralel beta-sheet, order 2134); d2: pseudo beta-barrel capped by helices
2ayi d2ayib1 B:184-206,208-214,251-255,313-320
2ayi d2ayia1 A:184-206,208-214,251-255,313-320
1zjc d1zjca1 A:185-208,210-217,253-258,316-323
31. e.76.1 Viral glycoprotein ectodomain-like
Viral glycoprotein ectodomain-like complex fold; contains three rigid, mostly-beta domains and an alpha-helical region, acting as a conformatiomal switch ("fusion stalk")
2gum d2gumc1 C:193-205,209-216,318-326,339-348
2gum d2gumb1 B:193-205,209-216,318-326,339-348
2gum d2guma1 A:193-205,209-216,318-326,339-348
32. c.87.1 UDP-Glycosyltransferase/glycogen phosphorylase
UDP-Glycosyltransferase/glycogen phosphorylase consists of two non-similar domains with 3 layers (a/b/a) each ! domain 1: parallel beta-sheet of 7 strands, order 3214567 ! domain 2: parallel beta-sheet of 6 strands, order 321456
1sxp d1sxpa_ A:17-34,36-40,42-46,47-51
1qkj d1qkja_ A:17-34,36-40,42-46,47-51
1sxq d1sxqa_ A:17-34,36-40,42-46,47-51
1jg6 d1jg6a_ A:17-34,36-40,42-46,47-51
1nzf d1nzfa_ A:17-34,36-40,42-46,47-51
1sxq d1sxqb_ B:17-34,36-40,42-46,47-51
1jg7 d1jg7a_ A:17-34,36-40,42-46,47-51
1nzd d1nzda_ A:17-34,36-40,42-46,47-51
1jiu d1jiua_ A:17-34,36-40,42-46,47-51
1sxp d1sxpb_ B:17-34,36-40,42-46,47-51
1m5r d1m5rb_ B:17-34,36-40,42-46,47-51
1jej d1jeja_ A:17-34,36-40,42-46,47-51
1jiv d1jiva_ A:17-34,36-40,42-46,47-51
1jix d1jixa_ A:17-34,36-40,42-46,47-51
1ixy d1ixya_ A:17-34,36-40,42-46,47-51
1nvk d1nvka_ A:17-34,36-40,42-46,47-51
1m5r d1m5ra_ A:17-34,36-40,42-46,47-51
1ixy d1ixyb_ B:17-34,36-40,42-46,47-51
33. d.81.2 Serine metabolism enzymes domain contains extra C-terminal beta-hairpin !
FwdE/GAPDH domain-like core: alpha-beta-alpha-beta(3); mixed sheet: 2134, strand 2 is parallel to strand 1
2iaf d2iafa1 A:4-25,31-39,82-87,89-94
2iqq d2iqqa1 A:14-35,41-49,92-97,99-104
2iqq d2iqqb1 B:14-35,41-49,92-97,99-104
34. e.29.1 beta and beta-prime subunits of DNA dependent RNA-polymerase The catalytic site is formed by the association of two double-psi beta-barrel domains, one from each subunit !
beta and beta-prime subunits of DNA dependent RNA-polymerase Multidomain subunits of complex domain organization
2e2i d2e2ib1 B:750-757,803-807,978-983,1084-1096
2e2h d2e2hb1 B:750-757,803-807,978-983,1084-1096
2nvz d2nvzb1 B:750-757,803-807,978-983,1084-1096
35. e.43.1 Subunits of heterodimeric actin filament capping protein Capz
Subunits of heterodimeric actin filament capping protein Capz 3 domains: (1) protozoan pheromone-like alpha-helical bundle; (2) rubredoxin-like domain lacking metal-binding site; (3) alpha+beta heterodimerisation domain: alpha-beta(5)-alpha
1izn d1iznc_ C:49-62,72-77,85-91,92-99
36. d.159.1 Metallo-dependent phosphatases different families of this superfamily are groupped in a single Pfam family,
Metallo-dependent phosphatases 4 layers: alpha/beta/beta/alpha; mixed beta sheets; contains duplication
2z06 d2z06a1 A:70-80,81-85,96-103,104-114
37. c.43.1 CoA-dependent acyltransferases
CoA-dependent acyltransferases core: 2 layers, a/b; mixed beta-sheet of 6 strands, order 324561; strands 3 & 6 are antiparallel to the rest
1t7o d1t7oa2 A:347-364,561-566,573-582,583-592
2h3w d2h3wb2 B:347-364,561-566,573-582,583-592
1t7n d1t7na2 A:347-364,561-566,573-582,583-592
1s5o d1s5oa2 A:326-343,540-545,552-561,562-571
1ndb d1ndba2 A:347-364,561-566,573-582,583-592
2h3w d2h3wa2 A:347-364,561-566,573-582,583-592
1ndf d1ndfa2 A:347-364,561-566,573-582,583-592
1ndb d1ndbb2 B:347-364,561-566,573-582,583-592
2h3u d2h3ua2 A:347-364,561-566,573-582,583-592
2h3p d2h3pb2 B:347-364,561-566,573-582,583-592
2h3p d2h3pa2 A:347-364,561-566,573-582,583-592
2h3u d2h3ub2 B:347-364,561-566,573-582,583-592
1t7q d1t7qb2 B:347-364,561-566,573-582,583-592
1t7q d1t7qa2 A:347-364,561-566,573-582,583-592
1ndi d1ndia2 A:347-364,561-566,573-582,583-592
1ndf d1ndfb2 B:347-364,561-566,573-582,583-592
1q6x d1q6xb2 B:338-355,557-562,569-578,579-588
1q6x d1q6xa2 A:338-355,557-562,569-578,579-588
1ndi d1ndib2 B:347-364,561-566,573-582,583-592
1nm8 d1nm8a2 A:326-344,540-545,552-561,562-571
1t1u d1t1ua2 A:338-356,557-562,569-578,579-588
38. f.4.3 Porins
Transmembrane beta-barrels not a true fold, gathers together transmembrane barrels of different (n,S)
1qfg d1qfga_ A:23-32,49-54,544-558,572-589
1fi1 d1fi1a_ A:23-32,49-54,544-558,572-590
2fcp d2fcpa_ A:23-32,49-54,542-556,570-588
1by3 d1by3a_ A:20-32,49-54,533-547,561-578
39. d.110.6 Sensory domain-like alpha(2)-beta(2)-alpha(2)-beta(3); possibly related to the PAS domain !
Profilin-like core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
2p7j d2p7ja2 A:9-46,181-185,244-253,259-267
2p7j d2p7jb2 B:9-46,181-185,244-253,259-267
40. b.40.4 Nucleic acid-binding proteins
OB-fold barrel, closed or partly opened n=5, S=10 or S=8; greek-key
1ltl d1ltlc_ C:50-61,84-89,213-224,238-242
41. b.121.6 Group I dsDNA viruses
Nucleoplasmin-like/VP (viral coat and capsid proteins) sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands ! characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
1sva d1sva1_ 1:31-38,44-53,88-95,257-273
1sva d1sva3_ 3:31-38,44-53,88-95,257-273
1sie d1siec_ C:33-40,46-55,98-105,276-291
1sid d1sidf_ F:33-40,46-55,98-105,276-291
1sid d1sida_ A:33-40,46-55,97-105,276-291
42. b.1.18 E set domains "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies !
Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
1ksg d1ksgb_ B:4-15,58-69,72-80,88-96
43. b.8.1 TRAF domain-like has a circularly permuted immunoglobulin-fold topology with extra strand !
TRAF domain-like sandwich; 8 strands in 2 sheets; greek-key
1qsc d1qscb1 B:323-348,352-360,375-384,387-398
1qsc d1qsca1 A:323-348,352-360,375-384,387-398
1qsc d1qscc1 C:323-348,352-360,375-384,387-398
44. h.1.2 Trimerization domain of TRAF
Parallel coiled-coil this is not a true fold; includes oligomers of shorter identical helices
1ca9 d1ca9d2 D:316-348,352-360,375-384,387-398
1ca9 d1ca9e2 E:316-348,352-360,375-384,387-398
1rf3 d1rf3a2 A:314-348,352-360,375-384,387-397
1ca9 d1ca9c2 C:311-348,352-360,375-384,387-398
1flk d1flka2 A:308-348,352-360,375-384,387-398
1fll d1fllb2 B:308-348,352-360,375-384,387-398
1fll d1flla2 A:300-348,352-359,375-383,389-396
1flk d1flkb2 B:300-348,352-360,375-384,387-398
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 178 (enumeration index: query161) of S4
3ikt A:89-98,104-112,118-123,124-128
3ikt B:89-98,104-112,118-123,124-128
3fwa A:79-94,95-101,194-202,229-238
3pqb A:40-55,57-62,152-163,196-204
3pqb B:40-55,57-62,152-163,196-204
3pqb C:40-55,57-62,152-163,196-204
3pqb D:40-55,57-62,152-163,196-204
2oqc A:104-113,125-129,141-149,152-159
2oqc B:104-113,125-129,141-149,152-159
2drd B:643-656,661-667,713-719,822-831
3g17 G:11-26,28-32,36-43,48-56
3g17 E:11-26,28-32,36-43,48-56
2rg2 A:104-113,125-130,141-149,151-160
2kxp A:49-62,72-77,85-91,92-99
3r0f B:5-15,22-30,98-106,147-154
3r0f A:1-15,22-30,98-106,147-154
2rf8 B:104-113,125-130,141-149,151-160
2rf8 A:104-113,125-130,141-149,151-160
2bzd C:525-532,537-541,550-559,620-628
3pgg A:28-37,39-46,62-68,97-103
3js8 A:38-53,54-60,168-179,206-214
2j8s C:643-658,661-667,712-719,821-832
2epg A:40-52,70-74,74-80,338-347
2epg B:40-52,70-74,74-80,338-347
2xr1 A:155-172,236-240,313-317,319-327
2xr1 B:155-172,236-240,313-317,319-327
2bmb A:402-420,431-441,447-451,452-456
2dr6 B:643-656,661-667,713-719,822-831
2zu1 A:1-15,22-30,98-106,147-154
2zu1 B:1-15,22-30,98-106,147-154
1wof A:9-17,24-33,109-119,145-154
1wof B:9-17,24-33,110-119,147-154
3lgv D:47-58,72-85,153-161,201-208
3lgv G:47-58,77-85,153-161,201-208
3lgv A:47-58,74-85,153-161,201-208
3lgv I:47-58,77-85,153-161,201-208
3lgv E:47-58,75-85,153-161,201-208
3lgv C:47-58,73-86,153-161,201-208
3lgv B:47-58,73-85,153-161,201-208
3lgv F:47-58,72-87,153-161,201-208
3af6 A:163-180,250-254,328-332,334-343
2y38 A:121-128,132-138,145-153,261-270
2xya A:1-15,22-30,98-105,147-154
2qhu A:12-30,34-42,42-49,79-84
3ruo B:0-15,22-30,98-106,147-154
3ruo A:0-15,22-30,98-107,147-154
2rlc A:104-113,125-130,141-149,151-160
3d2j A:79-94,95-101,194-202,229-238
2fy2 A:328-346,547-552,559-568,569-578
2zzf A:602-628,631-640,703-710,712-717
3lie B:34-72,207-211,270-279,285-293
3lie A:34-72,207-211,270-280,284-294
3m3v A:9-17,24-33,110-119,147-154
3m3v B:9-17,24-33,110-119,145-154
3c0p A:77-92,97-102,198-206,233-242
3lgt A:47-58,76-87,153-161,201-208
2y08 A:37-52,54-59,149-160,193-201
2y08 B:37-52,54-59,149-160,193-201
3aoc B:643-656,661-667,713-719,822-831
3hl2 A:172-183,184-190,410-415,416-421
3hl2 B:172-183,184-190,410-415,416-421
3hl2 D:172-183,184-190,410-415,416-421
3hl2 C:172-183,184-190,410-415,416-421
3ba3 A:2-14,14-23,41-49,117-125
3ofy S:11-25,29-33,36-40,66-70
2okx B:413-421,426-430,435-443,506-514
2ovi C:43-58,58-67,85-91,94-100
3pm9 B:59-74,76-81,174-182,214-223
3pm9 E:59-74,76-81,174-182,214-223
3pm9 F:59-74,76-81,174-182,214-223
3pm9 A:59-74,76-81,174-182,214-223
3pm9 D:59-74,76-81,174-182,214-223
3pm9 C:59-74,76-81,174-182,214-223
2z3k B:34-45,46-50,138-150,151-161
2z3k A:34-45,46-50,138-150,151-161
3nzi A:170-183,197-210,277-286,328-335
3qo6 B:115-132,148-163,231-240,282-289
1zr6 A:45-60,62-67,157-166,193-202
2hrt C:643-659,661-667,712-719,821-832
2hrt F:643-659,661-667,712-719,821-832
2aw5 C:416-425,427-433,438-442,444-448
2aw5 B:416-425,427-433,438-442,444-448
2aw5 A:416-425,427-433,438-442,444-448
3llg A:12-26,31-36,43-48,49-54
3lif B:46-89,178-189,205-213,215-222
2ztz B:1-15,22-30,98-106,147-154
2ztz A:1-15,22-30,98-106,147-154
3mml F:20-35,38-46,120-127,132-137
3mt5 A:549-562,563-570,1008-1018,1047-1055
3lic A:35-81,164-169,273-285,286-295
2q6d A:9-17,24-33,108-117,145-152
2q6d C:8-17,24-33,107-117,145-152
2q6d B:9-17,24-33,108-117,145-152
3lgy A:47-58,76-86,153-160,201-208
2i4c A:242-253,255-261,333-337,342-346
2qht A:12-30,34-42,42-49,77-84
2z3m A:34-45,46-50,138-150,151-161
2z3m B:34-45,46-50,138-150,151-161
2i4b A:242-253,255-261,333-337,342-346
2w54 E:185-197,199-203,303-310,334-342
2w54 G:185-197,199-203,303-310,334-342
2w54 A:185-197,199-203,303-310,334-342
2w54 C:185-197,199-203,303-310,334-342
2wv5 A:7-17,25-36,111-121,165-172
2wv5 B:7-17,25-36,112-121,163-172
2wv5 C:7-17,25-36,111-121,165-172
2wv5 D:7-17,25-36,111-121,165-172
2e2x B:1662-1673,1684-1688,1748-1752,1753-1757
2fy3 A:328-346,547-552,559-568,569-578
2y4g B:37-52,54-59,149-160,193-201
2y4g A:37-52,54-59,149-160,193-201
3e2e A:205-225,226-233,743-752,754-763
3aa7 A:50-62,73-77,85-91,92-101
3na2 A:3-20,21-29,48-55,56-63
3na2 D:3-20,21-29,48-55,56-63
3na2 B:3-20,21-29,48-55,56-63
3na2 C:4-20,21-29,48-55,56-63
2z3n B:34-45,46-50,138-150,151-161
2z3n A:34-45,46-50,138-150,151-161
2jh9 A:279-297,301-309,315-321,356-362
3hbc A:122-134,149-153,164-172,174-183
3k77 F:20-27,32-36,41-50,126-134
3k77 H:20-27,32-36,41-50,126-134
3k77 E:20-27,32-39,41-50,126-134
3k77 G:20-27,32-36,41-50,126-134
3k77 A:20-27,32-36,41-50,126-134
3k77 B:20-27,32-36,41-50,126-134
3k77 C:20-27,32-36,41-50,126-134
2xli A:16-36,40-46,142-149,152-166
3nwd C:193-205,209-216,318-324,339-348
3nwd D:193-205,209-216,318-324,339-348
3nwd B:193-205,209-216,318-324,339-348
3nwd A:193-205,209-216,318-324,339-348
2bvh D:47-62,64-69,158-166,193-202
2bvh A:47-62,64-69,158-166,193-202
2bvh C:47-62,64-69,158-166,193-202
2bvh B:47-62,64-69,158-166,193-202
3swn T:3-13,15-21,38-43,58-64
3swn E:3-13,15-21,38-43,58-64
3swn R:24-32,34-41,57-62,84-90
3swn S:6-15,17-24,40-46,61-67
3swn F:24-32,34-41,57-63,84-90
3swn D:6-15,17-24,40-46,61-67
3swn Q:4-13,15-22,38-43,58-64
3swn A:6-15,17-24,40-46,61-67
3swn B:4-13,15-22,38-43,58-64
3swn P:6-15,17-24,40-46,61-67
3f9f A:9-17,24-33,109-119,145-154
3f9f B:9-17,24-33,109-119,145-154
3m1c A:536-555,662-667,731-739,775-783
2bzc A:48-60,71-76,80-88,95-102
2xqx B:824-831,839-843,846-854,920-928
2hob A:9-17,24-33,110-119,145-154
3dq0 A:77-92,97-102,198-206,233-242
2nut B:670-684,684-694,766-770,772-778
2e5a A:14-29,35-41,43-50,76-84
2dps A:34-45,46-50,138-150,151-161
2dps B:34-45,46-50,138-150,151-161
2axr A:45-60,62-67,157-166,193-202
3aod B:643-658,661-667,713-719,822-831
2bjg B:104-113,125-130,142-149,151-160
2iuk B:1056-1064,1118-1128,1132-1142,1145-1158
2exr A:70-85,88-93,191-199,225-238
2i48 A:242-253,255-261,333-337,342-346
3gdu B:47-58,72-85,153-161,201-208
3gdu C:47-58,73-85,153-161,201-208
3gdu A:47-58,75-85,153-162,201-208
2qkn A:77-92,97-102,198-206,233-242
3nog C:643-659,660-667,712-719,821-832
3fw8 A:79-94,95-101,194-202,229-238
3sj8 A:4-15,22-30,98-106,147-154
3d2d A:79-94,95-101,193-202,229-238
2q6g A:9-17,24-33,109-119,145-154
2q6g B:9-17,24-33,110-119,145-154
3q3x B:0-15,22-30,98-106,147-154
3q3x A:0-15,22-30,98-106,147-154
3jwn I:123-131,138-146,149-158,164-168
3jwn C:123-131,138-146,149-158,164-168
2b0f A:1-15,22-30,97-106,147-153
2quy H:101-113,125-129,141-149,151-160
2quy E:101-113,125-129,141-149,151-159
2quy A:101-113,126-130,141-149,151-160
2quy D:101-113,125-130,141-149,151-159
2quy C:101-113,125-129,141-149,151-159
2quy F:101-113,125-130,141-149,151-159
3k9d B:200-211,213-217,419-424,429-434
3cw1 3:204-213,216-222,238-244,258-264
3cw1 S:206-214,216-223,239-245,259-265
3cw1 G:4-13,16-22,38-44,58-64
3cw1 4:404-413,416-422,438-444,458-464
3cw1 D:6-14,16-23,39-45,59-65
3cw1 F:6-17,16-24,40-46,60-66
3cw1 5:604-613,616-622,638-644,658-664
3cw1 T:406-414,416-423,439-445,459-465
3cw1 1:407-417,416-424,440-446,460-466
3cw1 Z:206-217,216-224,240-246,260-266
3cw1 U:606-614,616-623,639-645,659-665
3cw1 2:606-617,616-624,640-646,660-666
2amd A:9-17,24-33,109-119,147-154
2amd B:9-17,24-33,110-119,147-154
2dhh B:643-656,661-667,713-719,822-831
2zxc B:67-83,90-97,391-401,402-409
2zxc A:67-83,90-97,391-401,402-409
3cvd C:52-60,69-78,82-89,97-104
3cvd B:52-61,70-77,82-89,97-104
3cvd A:52-60,68-78,82-89,97-104
2qx0 B:66-86,92-103,106-110,111-115
3po3 B:750-757,803-807,978-983,1084-1096
2a5a A:9-17,24-33,110-119,147-154
2o4v B:134-141,212-222,330-345,359-373
2o4v C:134-141,212-221,271-286,290-306
2o4v B:134-141,212-222,271-286,290-306
2o4v A:134-141,212-221,271-286,290-306
3aob B:643-658,661-667,713-719,821-831
3iys E:23-30,36-45,76-83,248-261
3iys F:23-30,36-45,75-83,248-263
3iys C:23-30,36-45,76-83,248-263
2i49 A:242-253,255-261,333-337,342-346
3lh1 A:47-58,74-87,153-161,201-208
2qgg A:35-43,57-65,163-170,171-177
2d73 A:540-556,648-658,658-668,706-715
2d73 B:540-556,648-658,658-668,706-715
3ne5 A:641-654,658-664,710-716,818-828
2fy4 A:328-346,547-552,559-568,569-578
3pv6 B:81-89,89-97,103-113,115-128
3i4m B:750-757,803-807,978-983,1084-1095
3f9h B:9-17,24-33,110-119,147-154
3f9h A:9-17,24-33,109-119,145-154
2ph0 B:47-59,59-68,86-92,95-102
2ph0 A:44-59,59-68,86-91,95-101
3sji A:4-15,22-30,98-106,147-154
2v50 C:643-659,660-667,711-718,820-831
2v50 F:643-659,660-667,711-718,820-831
3pop A:40-55,57-62,152-163,196-204
3pop B:40-55,57-62,152-163,196-204
3pop D:40-55,57-62,152-163,196-204
3pop C:40-55,57-62,152-163,196-204
2jwy A:25-42,44-49,52-60,61-75
3k6y A:194-204,215-225,287-296,343-350
2w3r A:185-197,199-203,303-310,334-342
2w3r G:185-197,199-203,303-310,334-342
2w3r E:185-197,199-203,303-310,334-342
2w3r C:185-197,199-203,303-310,334-342
3ofb S:11-25,29-33,36-40,66-70
3eaj A:9-17,24-33,110-119,147-154
3eaj B:9-17,24-33,110-119,147-154
3lt3 B:194-204,217-225,287-296,343-350
3lt3 A:194-204,217-225,287-296,343-350
2bvg B:47-62,64-69,158-166,193-202
2bvg D:47-62,64-69,158-166,193-202
2bvg A:47-62,64-69,158-166,193-202
2bvg C:47-62,64-69,158-166,193-202
3il2 A:89-98,104-112,118-123,124-128
3il2 B:89-98,104-112,118-123,124-128
2fyq A:2-10,14-21,79-90,141-148
3lgw A:47-58,75-87,153-161,201-208
2in2 A:1-15,22-30,95-106,146-153
3d8k B:84-95,122-132,414-422,423-431
3d8k A:84-95,96-102,414-422,423-431
2a8m A:81-97,234-242,281-293,340-349
2qc2 B:9-17,24-33,110-119,145-154
2qc2 A:9-17,24-33,109-119,145-154
2a8i A:81-97,232-242,284-292,340-351
2a8i B:81-97,234-242,284-292,341-354
2zu3 A:1-15,22-30,98-106,147-154
2z4t A:68-75,76-82,87-99,101-114
3gsy A:79-94,95-101,194-202,229-238
2bvf B:47-62,64-69,158-166,193-202
2bvf A:47-62,64-69,158-166,193-202
2jha A:279-297,301-309,315-321,356-362
2a5i A:9-17,24-33,110-119,145-154
3d2h A:79-94,95-101,194-202,229-238
3bw7 A:77-92,97-102,198-206,233-242
3af5 A:163-180,250-254,328-332,334-343
2w88 C:52-60,70-78,83-89,97-104
2w88 B:52-60,70-78,83-89,97-104
2w88 A:52-60,70-78,83-89,97-104
2pwx A:10-17,24-33,111-119,145-153
3hsd B:65-83,93-102,105-109,110-114
2wdx A:66-81,83-88,178-189,222-230
2wdx B:66-81,83-88,178-189,222-230
2wdx D:66-81,83-88,178-189,222-230
2wdx C:66-81,83-88,178-189,222-230
3rhu A:3-24,26-37,102-109,111-116
2bz7 A:48-60,71-76,80-88,95-102
2gqu A:29-40,59-65,127-135,159-166
3hfo A:8-21,23-29,44-51,53-60
3hfo B:8-21,23-29,44-51,53-60
3k6z B:194-204,217-225,287-296,343-350
2gt8 A:9-17,24-33,110-119,145-154
2w80 H:80-87,125-131,137-150,151-167
2fy5 A:328-343,547-552,559-568,569-578
2cg8 C:183-199,210-219,222-226,227-231
2cg8 D:183-199,210-219,222-226,227-231
2cg8 B:183-199,210-219,222-226,227-231
2cg8 A:183-199,211-219,222-226,227-231
3q48 B:151-159,173-180,183-195,196-208
3q48 A:151-159,174-180,183-195,196-208
3snc A:9-17,24-33,110-119,145-154
3d23 D:9-17,24-33,110-119,145-154
3d23 C:9-17,24-33,110-119,145-154
3d23 B:9-17,24-33,110-119,145-154
3d23 A:9-17,24-33,110-119,145-154
3hsu A:45-60,62-67,157-166,193-202
3fp0 A:190-209,455-470,476-484,485-496
3fyf B:20-64,65-71,135-146,147-158
3fyf A:33-64,65-71,135-146,147-158
3sjk A:4-15,22-30,98-106,147-154
3iwm C:9-17,24-33,110-119,147-154
3iwm D:9-17,24-33,109-119,147-154
3iwm A:9-17,24-33,110-119,145-154
3iwm B:9-17,24-33,110-119,147-154
2zu5 A:9-17,24-33,110-119,147-154
2zty A:1-15,22-30,98-106,148-154
1wqs A:2-9,14-21,79-90,139-148
1wqs D:2-9,14-20,79-90,141-148
1wqs C:2-9,14-21,79-90,139-148
1z1j A:9-17,24-33,110-119,145-154
1z1j B:1009-1017,1024-1033,1110-1119,1145-1154
2j7m A:644-651,656-660,670-677,737-745
2z3l A:34-45,46-50,138-150,151-161
2z3l B:34-45,46-50,138-150,151-161
3lc6 A:289-308,332-339,376-382,406-412
3lc6 B:289-308,332-338,376-382,406-412
2a8j B:81-97,234-242,284-292,341-351
2a8j A:81-97,234-242,281-293,340-349
2zws A:67-83,90-97,391-401,402-409
3aoa B:643-658,661-667,713-719,822-831
3eh1 A:845-859,859-869,941-945,947-953
3qzq C:3-15,22-30,98-107,147-154
3qzq D:6-15,22-30,98-106,147-154
3qzq A:5-15,22-30,98-106,147-154
3qzq B:6-15,22-30,98-106,147-154
3fw7 A:79-94,95-101,194-202,229-238
3egd B:670-684,684-694,766-770,772-778
2wvy C:358-368,672-676,681-688,690-697
3s6n E:16-28,30-36,54-60,75-81
3s6n A:1-11,11-20,36-42,56-62
3s6n B:27-39,41-47,63-68,97-103
2dpt B:34-45,46-50,138-150,151-161
2dpt A:34-45,46-50,138-150,151-161
3oar S:11-25,29-33,36-40,66-70
3sne A:9-17,24-33,110-119,147-154
3cvc A:52-60,68-77,83-89,97-105
3cl9 A:131-141,147-154,484-490,503-508
3ili A:65-82,93-102,105-109,110-114
3phf W:439-455,540-548,616-624,655-663
3phf U:439-455,540-548,616-624,655-663
3phf Y:439-455,540-548,616-624,655-663
3phf 3:439-455,540-548,616-624,655-663
3phf G:439-455,540-548,616-624,655-663
3phf 1:439-455,540-548,616-624,655-663
3phf O:439-455,540-548,616-624,655-663
3phf C:439-455,540-548,616-624,655-663
3phf Q:439-455,540-548,616-624,655-663
3phf S:439-455,540-548,616-624,655-663
3phf A:439-455,540-548,616-624,655-663
3phf 5:439-455,540-548,616-624,655-663
3phf K:439-455,540-548,616-624,655-663
3phf E:439-455,540-548,616-624,655-663
3phf I:439-455,540-548,616-624,655-663
3phf M:439-455,540-548,616-624,655-663
2hez B:103-112,124-129,139-147,148-157
2hez A:103-112,124-129,139-147,148-157
2y9c Q:329-339,341-347,363-369,397-403
2y9c A:106-113,115-122,138-144,168-174
2y9c B:202-211,211-220,236-242,256-262
2y9c U:704-713,715-722,738-744,758-764
3nwa A:193-205,209-216,318-324,339-348
3nwa B:193-205,209-216,318-324,339-348
3nwa D:193-205,209-216,318-324,339-348
3nwa C:193-205,209-216,318-324,339-348
2uuu B:149-164,188-194,267-275,305-314
2uuu C:149-164,188-194,267-275,305-314
2uuu D:149-164,188-194,267-275,305-314
2uuu A:149-164,188-194,267-275,305-314
3naf A:549-562,563-572,1008-1018,1047-1055
2y3s A:37-52,54-59,149-160,193-201
2y3s B:37-52,54-59,149-160,193-201
2gz7 A:9-17,24-33,110-119,145-154
2iph A:1002-1010,1014-1021,1079-1090,1141-1148
3pgw Q:5-14,14-22,38-44,68-74
3pgw U:2-11,11-20,36-42,56-62
3pgw B:6-14,14-22,38-44,68-74
3pgw F:6-15,17-24,40-46,60-66
3pgw E:17-30,30-38,54-60,75-81
3pgw H:17-30,31-38,54-60,75-81
3pgw I:6-15,17-24,40-46,60-66
2vl6 C:56-67,96-101,232-240,254-265
2vl6 A:56-67,96-101,232-240,254-265
2vl6 B:56-67,96-101,232-240,260-265
2wv4 B:44-51,145-150,176-186,187-194
2wv4 B:6-17,25-36,111-121,163-169
2wv4 A:7-17,25-36,111-121,165-172
3nnm A:47-56,94-106,107-112,226-234
3f2z A:318-325,329-334,342-351,411-419
2gz9 A:9-17,24-33,109-119,145-154
2jhp A:279-297,301-309,315-321,356-362
3lgu A:47-58,74-87,153-161,201-208
3bw1 A:3-12,14-21,37-43,64-70
3bw1 B:3-12,14-21,37-43,64-70
3sj9 A:4-15,22-30,98-106,147-154
3mmg B:10-18,27-38,108-115,153-159
3mmg A:10-18,27-38,108-118,153-159
3lcb B:289-309,332-339,376-382,406-412
3lcb A:289-309,332-339,376-382,406-412
3hsz A:65-82,93-102,105-109,110-114
2a8l A:81-97,234-242,281-293,340-349
2a8l B:81-97,234-242,281-293,340-349
2gt7 A:9-17,24-33,109-119,147-154
2gt7 B:9-17,24-33,110-119,145-154
2yy4 B:9-17,24-33,110-119,145-154
2yy4 A:9-17,24-33,110-119,145-154
3gdv C:47-58,73-85,153-161,201-208
3gdv B:47-58,72-85,153-161,202-208
3gdv A:47-58,73-85,153-161,201-208
3nw8 D:193-205,209-216,318-324,339-348
3nw8 A:193-205,209-216,318-324,339-348
3nw8 C:193-205,209-216,318-324,339-348
3nw8 B:193-205,209-216,318-324,339-348
2qas A:12-35,43-50,85-94,95-104
3osy D:0-15,22-31,98-106,148-154
3osy B:0-15,22-31,98-106,148-154
3osy A:0-15,22-31,98-106,148-154
3osy C:0-15,22-31,98-106,148-154
3osy E:0-15,22-31,98-106,148-154
2xlj A:16-36,40-46,142-150,151-166
2xqy E:389-405,499-506,572-580,618-626
2xqy A:389-405,499-506,572-580,618-626
2xlk B:16-36,40-46,142-150,151-166
2xlk A:16-36,40-46,142-150,151-166
3ikv B:89-98,104-112,118-123,124-128
3ikv A:89-98,104-112,118-123,124-128
3qzr A:1-15,22-30,98-106,147-154
3qzr B:5-15,22-30,98-106,147-154
2z3o A:34-45,46-50,138-150,151-161
2z3o B:34-45,46-50,138-150,151-161
2hf0 B:103-112,124-129,139-147,148-157
2hf0 A:103-112,124-129,139-147,148-157
3nwf C:193-205,209-216,318-324,339-348
3nwf D:193-205,209-216,318-324,339-348
3nwf A:193-205,209-216,318-324,339-348
3nwf B:193-205,209-216,318-323,339-348
2jh8 A:279-297,301-309,315-321,356-362
3ea8 A:9-17,24-33,110-119,145-154
3noc C:643-659,660-667,712-719,821-832
3p02 A:26-34,55-67,74-83,115-121
3n6x A:20-33,75-79,411-417,420-435
2q6f A:9-17,24-33,108-117,143-152
2q6f B:9-17,24-33,108-117,143-152
3q3y A:0-15,22-30,98-106,147-154
3q3y B:0-15,22-30,98-106,147-154
3aa0 A:50-62,73-77,85-91,92-101
3f9e A:10-17,24-33,111-119,146-154
2vb0 A:1-15,22-30,98-107,147-154
3f9g A:9-17,24-33,109-119,147-154
3f9g B:9-17,24-33,109-119,147-154
2q4w A:70-85,88-93,191-199,225-238
2wdw B:66-81,83-88,178-189,222-230
2wdw A:66-81,83-88,178-189,222-230
2a5k B:9-17,24-33,110-119,145-154
2a5k A:9-17,24-33,109-119,145-154
2v6c A:136-158,159-163,183-190,199-204
3nnf A:47-56,94-106,107-112,226-234
2fyr A:2-10,14-21,79-90,141-148
2bjf A:104-113,125-130,141-149,151-160
2uuv D:149-164,188-194,267-275,305-314
2uuv A:149-164,188-194,267-275,305-314
2uuv B:149-164,188-194,267-275,305-314
2uuv C:149-164,188-194,267-275,305-314
2qpm A:77-92,97-102,198-206,233-242
3e91 A:9-17,24-33,109-119,145-154
3e91 B:9-17,24-33,110-119,145-154
2gqt A:29-40,59-65,127-135,159-166
2y9b N:704-713,715-722,738-744,758-764
2y9b G:704-713,715-722,738-743,758-764
2y9b U:704-713,715-722,738-744,758-764
2y9b H:104-113,115-122,138-144,168-174
2y9b J:326-339,340-347,363-369,397-403
2y9b Q:326-339,341-347,363-369,397-403
2y9b P:202-211,213-220,236-242,256-262
2r00 A:15-29,31-39,44-51,52-58
2r00 C:15-29,31-39,44-51,52-58
2jhc A:279-297,301-309,315-321,356-362
2qhs A:12-30,34-42,42-49,77-84
2z71 A:101-113,126-130,141-149,151-159
2z71 C:101-113,125-130,141-149,151-160
3snd B:9-17,24-33,109-119,147-154
3snd A:9-17,24-33,110-119,147-154
2gif C:643-659,661-667,712-719,821-832
3i4n B:750-757,803-807,978-983,1084-1096
2gtb A:9-17,24-33,110-119,145-154
3lib C:40-79,164-174,275-286,287-296
3lib B:58-78,164-174,273-286,287-296
3lib H:39-79,164-174,275-286,287-296
2qz9 A:15-29,31-39,44-51,52-58
2qz9 C:15-29,31-39,44-51,52-58
2qz9 B:15-29,31-39,46-51,52-57
3lgi C:47-58,73-86,153-161,201-208
3lgi B:47-58,72-85,153-161,201-208
2qaz A:12-35,43-50,85-94,95-104
2qaz D:12-34,43-50,85-92,97-104
2qaz C:12-35,43-50,85-94,95-104
2qaz B:12-35,43-50,85-94,95-104
2jka A:540-556,648-658,658-668,706-715
2jka B:540-556,648-658,658-668,706-715
3e3j C:205-225,226-233,743-752,754-763
3e3j B:205-225,226-233,743-752,754-763
3qg5 D:98-111,112-116,120-127,129-138
3qg5 C:96-111,112-116,120-127,129-138
3mh6 A:14-25,82-94,162-171,210-217
2zzg A:602-628,631-640,703-710,712-717
2zzg B:602-628,631-640,703-710,712-717
2wq8 A:26-33,38-42,51-59,122-130
3k07 A:641-654,657-664,710-716,818-828
2kd7 A:29-36,41-45,53-61,122-130
3fw9 A:79-94,95-101,194-202,229-238
3fki B:750-757,803-807,978-983,1084-1095
2w55 C:185-197,199-203,303-310,334-342
2w55 A:185-197,199-203,303-310,334-342
2w55 E:185-197,199-203,303-310,334-342
2w55 G:185-197,199-203,303-310,334-342
3cgz A:340-357,371-375,408-417,469-479
3gmg B:180-195,196-204,221-226,227-231
3gmg A:180-195,196-204,221-226,227-231
2zu2 A:9-17,24-33,107-118,144-153
2zu2 B:9-17,24-33,108-118,144-153
2gn6 B:139-159,164-172,264-270,313-318
2bx4 A:9-17,24-33,110-119,147-154
2q8u B:99-111,112-116,120-127,129-138
2q8u A:99-111,112-116,120-126,130-138
2amq A:9-17,24-33,109-119,147-154
2amq B:9-17,24-33,110-119,147-154
2iwm B:104-116,128-133,144-152,154-163
2iwm D:104-116,129-133,144-152,154-163
2iwm C:104-116,129-133,144-152,154-163
2gz8 A:9-17,24-33,110-119,147-154
3f9v A:56-67,96-101,232-240,254-265
3fm2 A:4-16,17-25,45-54,55-62
3fm2 B:4-16,17-25,45-54,55-62
3m3s A:9-17,24-33,109-119,145-154
3m3s B:9-17,24-33,110-119,147-154
3lh3 E:47-58,73-85,153-161,201-208
3lh3 H:47-58,78-86,153-161,201-208
3lh3 D:47-58,72-86,153-161,201-208
3lh3 G:47-58,77-85,153-162,201-208
3lh3 F:47-58,71-85,153-161,201-208
3lh3 A:47-58,73-85,153-161,201-208
3lh3 I:47-58,74-85,153-161,201-208
3lh3 B:47-58,74-85,153-161,201-208
3lh3 C:47-58,72-85,153-161,201-208
3nwu C:170-183,198-210,277-285,328-335
3nwu B:170-183,199-210,277-285,328-335
3nwu A:170-183,201-210,277-285,330-335
2z3p A:34-45,46-50,138-150,151-161
2z3p B:34-45,46-50,138-150,151-161
3eps B:289-309,332-339,376-382,406-412
3eps A:289-308,332-339,376-382,406-412
3num A:170-183,197-210,277-284,328-335
3kjs A:131-141,147-154,484-490,503-508
3sna A:9-17,24-33,110-119,145-154
2v72 A:23-30,35-39,47-55,116-123
3bqv A:52-60,69-77,82-90,97-104
2y9d I:203-211,211-220,236-242,256-262
2y9d E:620-629,632-638,654-660,675-681
2y9d R:5-17,16-23,39-45,59-65
2y9d J:327-339,340-347,363-369,397-403
2y9d N:704-713,715-722,738-744,758-764
2y9d U:704-713,715-722,738-744,758-764
2y9d Q:326-339,341-347,363-369,397-403
2ww2 C:358-368,672-676,681-688,690-697
2ww2 A:358-368,672-676,681-688,690-697
2ww2 B:358-368,672-676,681-688,690-697
2e12 B:11-28,30-36,59-73,75-83
2zu4 A:9-17,24-33,110-119,147-154
2j1e A:644-651,656-660,670-677,737-745
3sjo H:4-15,22-30,98-106,147-154
3sjo C:4-15,22-30,98-106,149-154
3sjo D:4-15,22-30,98-106,147-154
3sjo G:4-15,22-30,98-106,147-154
3sjo E:4-15,22-30,98-106,148-154
3sjo B:4-15,22-30,98-106,147-154
3sjo F:4-15,22-30,98-107,149-154
3sjo A:4-15,22-30,98-106,147-154
2y3r D:37-52,54-59,149-160,193-201
2y3r C:37-52,54-59,149-160,193-201
2y3r A:37-52,54-59,149-160,193-201
2y3r B:37-52,54-59,149-160,193-201
1zms A:313-348,352-360,375-384,387-398
3kjm A:77-92,97-102,198-206,232-242
3kjm A:77-92,114-121,198-206,232-242
2w8c B:52-60,69-78,82-89,97-104
2w8c A:52-61,69-78,83-89,97-104
2d2d B:9-17,24-33,109-119,147-154
2d2d A:9-17,24-33,109-119,147-154
3snb A:9-17,24-33,110-119,145-154
3lk4 P:50-62,73-77,85-91,92-101
3lk4 4:50-62,73-77,85-91,92-101
3lk4 M:50-62,73-77,85-91,92-101
3lk4 V:50-62,73-77,85-91,92-101
3lk4 Y:50-62,73-77,85-91,92-101
3lk4 J:50-62,73-77,85-91,92-101
3lk4 7:50-62,73-77,85-91,92-101
3lk4 D:50-62,73-77,85-91,92-101
3lk4 S:50-62,73-77,85-91,92-101
3lk4 A:50-62,73-77,85-91,92-101
3lk4 G:50-62,73-77,85-91,92-101
3lk4 1:50-62,73-77,85-91,92-101
2ycb B:154-171,236-240,313-317,319-327
2ycb A:154-171,236-240,312-317,319-327
3mji C:104-116,129-133,144-152,154-163
3mji B:104-116,128-132,144-152,154-163
3mji D:104-116,129-133,144-152,154-163
2yv3 A:10-24,28-35,41-46,47-52
2yv3 B:10-24,28-35,41-46,47-52
2orx A:449-456,470-475,483-489,560-568
3rfz C:123-131,138-146,149-158,164-168
2jjt C:69-76,76-83,92-101,102-114
2jjt D:69-76,76-83,92-101,102-114
2y7s A:15-22,60-66,72-85,86-102
2ipi B:45-60,62-67,157-168,201-209
2ipi A:45-60,62-67,157-168,201-209
2ipi C:45-60,62-67,157-168,201-210
2ipi D:45-60,62-67,157-168,201-209
2h2z A:9-17,24-33,109-119,147-154
2qhv A:12-30,34-42,42-49,77-84
1y96 A:8-16,17-25,41-51,53-62
1y96 C:8-16,17-25,41-51,53-62
2w3s A:185-197,199-203,303-310,334-342
2w3s G:185-197,199-203,303-310,334-342
2w3s C:185-197,199-203,303-310,334-342
2w3s E:185-197,199-203,303-310,334-342
2npl X:45-55,56-63,66-78,79-91
3cvb A:52-60,69-77,82-90,97-104
3cvb B:52-60,69-77,82-89,97-104
3ea7 A:9-17,24-33,109-119,145-154
3ea7 B:9-17,24-33,110-119,145-154
3lid A:33-72,207-211,270-279,285-293
3lid B:36-72,207-211,270-279,285-293
2gkw A:313-348,352-360,374-384,387-398
2y9a B:202-211,211-220,236-242,256-262
2y9a S:620-629,631-638,654-660,675-681
2y9a G:704-713,715-722,738-744,758-764
2y9a J:326-339,340-347,363-369,397-403
2y9a U:704-713,715-722,738-743,758-764
2y9a Q:326-339,341-347,363-369,397-403
2y9a P:202-211,214-220,236-242,256-262
3sn8 A:9-17,24-33,110-119,145-154
1gv0 A:120-133,138-142,250-255,259-271
1do8 D:3429-3438,3440-3446,3451-3455,3457-3461
1do8 B:1429-1438,1440-1446,1451-1455,1457-1461
1do8 C:2429-2438,2440-2446,2451-2455,2457-2461
2gz3 B:12-25,30-36,41-48,49-55
2pi8 A:35-51,248-252,256-261,305-314
2pi8 C:35-51,248-252,256-261,306-314