Observed motif hits of pattern ID: 227 (enumeration index: query169) of S4

List of motif hits in the counted superfamilies for pattern ID: 227 (enumeration index: query169) of S4

1.   e.50.1        AF1104-like    
                   AF1104-like 2 domains; d1: [all-alpha; 3-helical bundle, similar to the immunoglobulin/albumin-binding domain-like fold (scop_cf 46996)]; d2: [alpha/beta; 3 layers, a/b/a; 6-stranded mixed beta-sheet, order: 321456, strand 6 is antiparallel to the rest]
                   2q40  d2q40a1  A:134-146,147-165,221-241,313-320
                   1xfi  d1xfia_  A:134-146,147-165,221-241,313-319
                   2q40  d2q40a1  A:134-146,147-165,221-241,334-343
                   1xfi  d1xfia_  A:134-146,147-165,221-241,334-343
                   2ffj  d2ffjb1  B:85-96,98-113,168-179,239-245
                   2ffj  d2ffja1  A:85-96,98-110,168-179,239-245
                   2g8l  d2g8lb1  B:69-94,96-110,157-175,235-241
                   2ffj  d2ffja1  A:85-96,98-110,168-179,259-267
                   2ffj  d2ffjb1  B:85-96,98-113,168-179,259-267
                   2g8l  d2g8lb1  B:69-94,96-110,157-175,255-263
                   2g8l  d2g8la1  A:69-93,96-110,157-176,235-241
                   2g8l  d2g8la1  A:69-93,96-110,157-176,255-263

2.   e.3.1         beta-lactamase/transpeptidase-like    
                   beta-lactamase/transpeptidase-like contains a cluster of helices and an alpha+beta sandwich
                   1tvf  d1tvfb2  B:73-92,127-139,204-220,254-263
                   1es3  d1es3a_  A:33-48,84-96,153-168,208-217
                   1tvf  d1tvfa2  A:73-92,127-139,204-220,254-263
                   1skf  d1skfa_  A:33-48,84-96,153-168,208-217
                   1esi  d1esia_  A:33-48,84-96,153-168,208-217
                   1xp4  d1xp4a2  A:54-73,107-119,184-200,234-243
                   3bec  d3beca2  A:42-61,98-110,161-177,208-217
                   1j9m  d1j9ma_  A:33-48,84-96,153-168,208-217
                   1es4  d1es4a_  A:33-48,84-96,153-168,208-217
                   1xp4  d1xp4c2  C:54-73,107-119,184-200,234-243
                   1es2  d1es2a_  A:33-48,84-96,153-168,208-217
                   1es5  d1es5a_  A:33-48,84-96,153-168,208-217
                   1xp4  d1xp4b2  B:54-73,107-119,184-200,234-243
                   1xp4  d1xp4d2  D:54-73,107-119,184-200,234-243
                   3beb  d3beba2  A:42-61,98-110,161-177,208-217
                   1z6f  d1z6fa2  A:42-61,98-110,161-177,208-217
                   2c6w  d2c6wb1  B:369-385,420-428,479-493,554-562
                   1hd8  d1hd8a2  A:42-61,98-110,161-177,208-217
                   2olv  d2olvb2  B:396-414,446-454,504-518,580-588
                   1nj4  d1nj4a2  A:42-61,98-110,161-177,208-217
                   2bg1  d2bg1a1  A:458-475,508-516,563-577,648-654
                   3dwk  d3dwkd2  D:396-414,446-454,504-518,580-588
                   3dwk  d3dwkc2  C:396-414,446-454,504-518,580-588
                   3dwk  d3dwka2  A:396-414,446-454,504-518,580-588
                   1nzo  d1nzoa2  A:42-61,98-110,161-177,208-217
                   3dwk  d3dwkb2  B:396-414,446-454,504-518,580-588
                   2c5w  d2c5wb1  B:369-385,420-428,479-493,554-562
                   2olv  d2olva2  A:396-414,446-454,504-518,580-588
                   2fff  d2fffb1  B:458-475,508-516,563-577,648-655
                   2olu  d2olua2  A:396-414,446-454,504-518,580-588
                   1dy6  d1dy6a_  A:68-87,118-130,182-196,229-240
                   1dy6  d1dy6b_  B:68-87,118-130,182-196,229-240
                   2j9p  d2j9pb1  B:50-67,287-299,357-371,407-416
                   1bue  d1buea_  A:68-87,118-130,182-196,229-238
                   2cc1  d2cc1a1  A:68-87,118-130,182-196,228-240
                   1mwr  d1mwra3  A:401-417,454-462,527-541,593-603
                   1w8y  d1w8yc1  C:47-64,286-298,356-370,406-415
                   2blm  d2blmb_  B:68-87,118-130,182-196,229-240
                   1w5d  d1w5da1  A:50-67,287-299,357-371,407-416
                   4blm  d4blma_  A:68-87,118-130,182-196,229-240
                   1w8y  d1w8yb1  B:47-64,286-298,356-370,406-415
                   1vqq  d1vqqb3  B:401-417,454-462,527-541,593-603
                   1hzo  d1hzoa_  A:68-88,118-130,182-197,229-238
                   1w79  d1w79c1  C:47-64,286-298,356-370,406-415
                   1hzo  d1hzob_  B:68-88,118-130,182-196,229-238
                   2blm  d2blma_  A:68-87,118-130,182-196,229-240
                   2j9p  d2j9pa1  A:50-67,287-299,357-371,407-416
                   1w79  d1w79b1  B:47-64,286-298,356-370,406-415
                   1vqq  d1vqqa3  A:401-417,454-462,527-541,593-603
                   1w8y  d1w8yd1  D:47-64,286-298,356-370,406-415
                   1w8y  d1w8ya1  A:47-64,286-298,356-370,406-415
                   1g6a  d1g6aa_  A:68-87,118-130,182-197,229-238
                   1iyo  d1iyoa_  A:68-88,118-130,182-196,229-238
                   1mwr  d1mwrb3  B:401-417,454-462,527-541,593-603
                   1w79  d1w79a1  A:47-64,286-298,356-370,406-415
                   1bsg  d1bsga_  A:68-86,118-130,182-197,229-240
                   1iyp  d1iypa_  A:68-88,118-130,182-196,229-238
                   1w79  d1w79d1  D:47-64,286-298,356-370,406-415
                   1w8q  d1w8qd1  D:47-64,286-298,356-370,406-415
                   1g68  d1g68a_  A:68-87,118-130,182-196,229-238
                   1iys  d1iysa_  A:68-88,118-130,182-196,229-238
                   1w8q  d1w8qa1  A:47-64,286-298,356-370,406-415
                   1i2w  d1i2wa_  A:68-87,118-130,182-196,228-240
                   1iyq  d1iyqa_  A:68-88,118-130,182-196,229-238
                   2exb  d2exba1  A:60-77,294-306,366-381,413-422
                   1i2w  d1i2wb_  B:68-87,118-130,182-196,228-240
                   2ex2  d2ex2a1  A:60-77,294-306,366-381,413-422
                   2ex9  d2ex9a1  A:60-77,294-306,366-381,413-422
                   2ex6  d2ex6a1  A:60-77,294-306,366-381,413-422
                   2exa  d2exaa1  A:60-77,294-306,366-381,413-422
                   1bul  d1bula_  A:68-87,118-130,182-196,228-240
                   2ex8  d2ex8a1  A:60-77,294-306,366-381,413-422
                   1bza  d1bzaa_  A:68-88,118-130,182-196,229-238
                   2zc3  d2zc3e1  E:335-351,387-395,457-471,543-552
                   2zc4  d2zc4b1  B:335-351,387-395,457-471,543-552
                   2zc4  d2zc4e1  E:335-351,387-395,457-471,543-552
                   1i2s  d1i2sb_  B:68-87,118-130,182-196,228-240
                   2z2l  d2z2le1  E:335-351,387-395,457-471,543-552
                   1qmf  d1qmfa4  A:335-351,387-395,457-471,543-552
                   1i2s  d1i2sa_  A:68-87,118-130,182-196,228-240
                   1pyy  d1pyya4  A:335-351,387-395,457-471,543-552
                   1htz  d1htzf_  F:68-87,118-130,182-196,229-240
                   1qme  d1qmea4  A:336-351,387-395,457-471,543-552
                   1mws  d1mwsa3  A:405-417,454-462,527-541,593-602
                   2zc3  d2zc3b1  B:336-351,387-395,457-471,543-552
                   4blm  d4blmb_  B:68-87,118-130,182-196,228-240
                   1rp5  d1rp5b4  B:335-351,387-395,457-471,543-552
                   1mbl  d1mbla_  A:68-87,118-130,182-196,228-240
                   1mbl  d1mblb_  B:68-87,118-130,182-196,228-240
                   2z2m  d2z2me1  E:335-351,387-395,457-471,543-553
                   1mwu  d1mwua3  A:405-417,454-462,527-541,593-602
                   1ewz  d1ewzd_  D:65-81,107-115,162-176,199-214
                   1rp5  d1rp5a4  A:335-351,387-395,457-471,543-552
                   1mwt  d1mwta3  A:405-417,454-462,527-541,593-603
                   1lhy  d1lhya_  A:68-87,118-130,182-196,228-240
                   1li0  d1li0a_  A:68-87,118-130,182-196,228-238
                   1jwz  d1jwza_  A:68-87,118-130,182-196,228-240
                   1m6k  d1m6kb_  B:65-81,107-115,168-182,206-219
                   1fof  d1fofa_  A:65-81,107-115,162-176,199-214
                   2z2m  d2z2mb1  B:335-351,387-395,457-471,543-553
                   1k56  d1k56d_  D:65-81,107-115,162-176,199-214
                   1h5x  d1h5xb_  B:65-81,107-115,162-176,199-214
                   2z2l  d2z2lb1  B:336-351,387-395,457-471,543-552
                   1mws  d1mwsb3  B:405-417,454-462,527-541,593-603
                   1m6k  d1m6ka_  A:65-81,107-115,168-182,206-219
                   1h8z  d1h8zb_  B:65-81,107-115,162-176,199-214
                   1sdn  d1sdna2  A:42-61,98-108,161-177,208-217
                   1mwt  d1mwtb3  B:405-417,454-462,527-541,593-603
                   1htz  d1htzd_  D:68-87,118-130,182-196,228-240
                   1nxy  d1nxya_  A:68-87,118-130,182-196,228-238
                   1nzu  d1nzua2  A:42-61,98-108,161-177,208-217
                   1ewz  d1ewzc_  C:65-81,107-115,162-176,199-214
                   1e3u  d1e3ud_  D:65-81,107-115,162-176,199-214
                   1s0w  d1s0wa_  A:68-87,118-130,182-196,228-239
                   1jvj  d1jvja_  A:68-87,118-130,182-196,228-240
                   1xa1  d1xa1c_  C:57-73,99-107,153-167,190-201
                   1htz  d1htza_  A:68-87,118-130,182-196,228-240
                   1htz  d1htzb_  B:68-87,118-130,182-196,228-240
                   1k57  d1k57c_  C:65-81,107-115,162-176,199-214
                   1k54  d1k54d_  D:65-81,107-115,162-176,199-214
                   1ny0  d1ny0a_  A:68-87,118-130,182-196,228-238
                   1jwp  d1jwpa_  A:68-87,118-130,182-196,228-238
                   1k54  d1k54c_  C:65-81,107-115,162-176,199-214
                   1nyy  d1nyya_  A:68-87,118-130,182-196,228-240
                   1pmd  d1pmda4  A:336-351,387-395,457-471,543-552
                   2b5r  d2b5ra1  A:68-87,118-130,182-196,228-238
                   1e4d  d1e4dd_  D:65-81,107-115,162-176,199-214
                   1nym  d1nyma_  A:68-87,118-130,182-196,228-238
                   1pzo  d1pzoa_  A:68-87,118-130,182-196,228-240
                   1o7e  d1o7eb_  B:68-88,118-130,182-196,228-238
                   1htz  d1htzc_  C:68-87,118-130,182-196,228-240
                   1k57  d1k57d_  D:65-81,107-115,162-176,199-214
                   1jtd  d1jtda_  A:68-87,118-130,182-196,228-239
                   1e3u  d1e3uc_  C:65-81,107-115,162-176,199-214
                   1m40  d1m40a_  A:68-87,118-130,182-196,228-238
                   1jwv  d1jwva_  A:68-87,118-130,182-196,228-238
                   1s0w  d1s0wb_  B:68-87,118-130,182-196,228-239
                   1bt5  d1bt5a_  A:68-87,118-130,182-196,228-238
                   1fof  d1fofb_  B:65-81,107-115,162-176,199-214
                   1h8y  d1h8yb_  B:65-81,107-115,162-176,199-213
                   1htz  d1htze_  E:68-87,118-130,182-196,228-240
                   1li9  d1li9a_  A:68-87,118-130,182-196,228-238
                   3c7v  d3c7va1  A:68-87,118-130,182-196,228-238
                   1pzp  d1pzpa_  A:68-87,118-130,182-196,228-238
                   3c7u  d3c7ua1  A:68-87,118-130,182-196,228-238
                   1e4d  d1e4dc_  C:65-81,107-115,162-176,199-214
                   1h8y  d1h8ya_  A:65-81,107-115,162-176,199-214
                   1axb  d1axba_  A:68-87,118-130,182-196,228-238
                   1h5x  d1h5xa_  A:65-81,107-115,162-176,199-214
                   2b5r  d2b5rb1  B:68-87,118-130,182-196,228-238
                   1n4o  d1n4ob_  B:68-88,118-130,182-196,228-238
                   1fqg  d1fqga_  A:68-87,118-130,182-196,228-239
                   1zg4  d1zg4a1  A:68-87,118-130,182-196,228-240
                   1jtg  d1jtgc_  C:68-87,118-130,182-196,228-238
                   1ck3  d1ck3a_  A:68-87,118-130,182-196,228-238
                   1xpb  d1xpba_  A:68-87,118-130,182-196,228-240
                   1ero  d1eroa_  A:68-87,118-130,182-196,228-238
                   1h8z  d1h8za_  A:65-81,107-115,162-176,199-214
                   3c7v  d3c7vc1  C:68-87,118-130,182-196,228-238
                   1ewz  d1ewza_  A:65-81,107-115,162-176,199-214
                   1jtg  d1jtga_  A:68-87,118-130,182-196,228-238
                   1erm  d1erma_  A:68-87,118-130,182-196,228-239
                   2g2w  d2g2wa1  A:68-87,118-130,182-196,228-240
                   1e3u  d1e3ua_  A:65-81,107-115,162-176,199-214
                   1ewz  d1ewzb_  B:65-81,107-115,162-176,199-214
                   1k56  d1k56a_  A:65-81,107-115,162-176,199-214
                   3c7u  d3c7uc1  C:68-87,118-130,182-196,228-238
                   1e25  d1e25a_  A:68-87,118-130,182-196,230-240B
                   1e3u  d1e3ub_  B:65-81,107-115,162-176,199-214
                   1k6s  d1k6sa_  A:65-81,107-115,162-176,199-214
                   1esu  d1esua_  A:68-87,118-130,182-196,228-240
                   1k4f  d1k4fa_  A:65-81,107-115,162-176,199-214
                   1k56  d1k56b_  B:65-81,107-115,162-176,199-214
                   1k57  d1k57b_  B:65-81,107-115,162-176,199-214
                   1erq  d1erqa_  A:68-87,118-130,182-196,228-239
                   1tem  d1tema_  A:68-87,118-130,182-196,228-238
                   1e4d  d1e4da_  A:65-81,107-115,162-176,199-214
                   1e4d  d1e4db_  B:65-81,107-115,162-176,199-214
                   1k57  d1k57a_  A:65-81,107-115,162-176,199-214
                   1k55  d1k55b_  B:65-81,107-115,162-176,199-214
                   1k54  d1k54a_  A:65-81,107-115,162-176,199-214
                   1k55  d1k55a_  A:65-81,107-115,162-176,199-214
                   1k6r  d1k6rb_  B:65-81,107-115,162-176,199-214
                   1k54  d1k54b_  B:65-81,107-115,162-176,199-214
                   3c4o  d3c4oa1  A:68-87,118-130,182-197,228-238
                   1n4o  d1n4oa_  A:68-88,118-130,182-196,228-238
                   2g2u  d2g2ua1  A:68-87,118-130,182-196,228-240
                   3c4p  d3c4pa1  A:68-87,118-130,182-196,228-240
                   1k6r  d1k6ra_  A:65-81,107-115,162-176,199-214
                   1o7e  d1o7ea_  A:68-88,118-130,182-196,228-238
                   1k6s  d1k6sb_  B:65-81,107-115,162-176,199-214
                   2uwx  d2uwxa1  A:462-475,508-516,563-577,648-655
                   1nrf  d1nrfa_  A:400-416,442-450,496-510,533-545
                   1k4f  d1k4fb_  B:65-81,107-115,162-176,199-214
                   1k4e  d1k4eb_  B:65-81,107-115,162-176,199-214
                   1btl  d1btla_  A:68-87,118-130,182-196,228-238
                   1xa1  d1xa1d_  D:57-73,99-107,153-166,190-203
                   1k4e  d1k4ea_  A:65-81,107-115,162-176,199-214
                   1xa1  d1xa1b_  B:57-73,99-107,153-167,190-203
                   1xkz  d1xkzb_  B:387-403,429-437,483-497,520-533
                   1xa1  d1xa1a_  A:57-73,99-107,153-166,190-203
                   1xkz  d1xkzd_  D:387-403,429-437,483-497,520-533
                   1xkz  d1xkzc_  C:387-403,429-437,483-497,520-533
                   1w8q  d1w8qb1  B:47-64,286-298,356-370,407-415
                   1xkz  d1xkza_  A:387-403,429-437,483-497,520-533
                   1k38  d1k38b_  B:69-81,107-115,162-176,199-209
                   1k38  d1k38a_  A:69-81,107-115,162-176,199-210
                   1k56  d1k56c_  C:69-81,107-115,162-176,199-214
                   1k55  d1k55c_  C:69-81,107-115,162-176,199-214
                   1xa7  d1xa7b_  B:61-73,99-107,153-168,190-203
                   1xa7  d1xa7a_  A:61-73,99-107,153-167,190-201
                   1s6r  d1s6ra_  A:105-112,151-167,245-258,264-269

3.   a.234.1       Hypothetical protein MPN330    
                   Hypothetical protein MPN330 multihelical; consists of three different 4-helical bundles
                   1td6  d1td6a_  A:122-132,138-151,155-169,173-183

11.  d.213.1       VSV matrix protein    
                   VSV matrix protein beta-alpha(2)-beta(4)-alpha-beta(2); two layers: alpha/beta; bifurcated coiled beta-sheet: order of the first 5 strands: 23154
                   1lg7  d1lg7a_  A:80-93,101-116,198-209,209-215

15.  d.377.1       Rv2827c C-terminal domain-like    
                   Rv2827c C-terminal domain-like multihelical array flanked by two three-stranded mixed beta-sheets
                   1zel  d1zela2  A:212-221,224-239,240-251,278-283
                   1zel  d1zelb2  B:212-223,224-239,240-251,278-283

17.  e.69.1        Poly(A) polymerase catalytic subunit-like  Central domain d2 is distantly related to the nucleotidyltransferase superfamily (scop_sf 81301)  
                   Poly(A) polymerase catalytic subunit-like 3 domains; d1: all-alpha, contains HhH motif; d2: alpha+beta of nucleotidyltransferase fold (scop_cf 81302); d3: [alpha+beta; beta(3)-alpha-beta(3)-alpha(2); 3 layers: a/b/a; mixed beta-sheet of 6 strands, order 123654, strands 2 and 5 are antiparallel to the rest
                   2gaf  d2gafd1  D:48-65,162-180,209-226,248-257
                   2ga9  d2ga9d1  D:48-65,162-180,209-226,248-257