1. i.7.1 Reovirus components
Reovirus components
1ej6 d1ej6c_ C:1049-1053,1154-1159,1177-1184,1192-1199
1ej6 d1ej6b_ B:1049-1053,1154-1159,1177-1184,1192-1199
2. b.28.1 Baculovirus p35 protein has a few helices inserted in loops !
Baculovirus p35 protein sandwich; 14 strands in 2 sheets; greek-key
1p35 d1p35a_ A:24-35,97-101,148-157,163-173
1p35 d1p35b_ B:24-36,97-101,148-157,163-173
3. b.16.1 Ecotin, trypsin inhibitor
Ecotin, trypsin inhibitor sandwich; 8 strands in 2 sheets; complex topology with the crossing loops
1n8o d1n8oe_ E:19-26,69-77,105-109,114-121
1xxd d1xxdc_ C:19-26,69-79,105-109,114-121
1xxd d1xxdd_ D:19-26,69-79,105-109,114-121
1ifg d1ifga_ A:19-26,68-83,105-109,114-121
1ecz d1ecza_ A:19-26,67-83,105-109,114-121
1ecz d1eczb_ B:19-26,67-83,105-109,114-121
1slx d1slxa_ A:19-26,68-84,105-109,114-121
1slu d1slua_ A:19-26,68-84,105-109,114-121
1azz d1azzd_ D:19-26,68-84,105-109,114-121
1azz d1azzc_ C:19-26,68-84,105-109,114-121
1slw d1slwa_ A:19-26,69-84,105-109,114-121
1xxf d1xxfd_ D:19-26,69-84,105-109,114-121
4. c.8.5 GroEL apical domain-like
The "swivelling" beta/beta/alpha domain 3 layers: b/b/a; the central sheet is parallel, and the other one is antiparallel; there are some variations in topology ! this domain is thought to be mobile in most multi-domain proteins known to contain it
1we3 d1we3l2 L:190-199,245-251,250-254,271-276
1wf4 d1wf4n2 N:190-199,245-251,250-254,271-276
1wf4 d1wf4l2 L:190-199,245-251,250-254,271-276
1we3 d1we3k2 K:190-199,245-251,250-254,271-276
1we3 d1we3n2 N:190-199,245-251,250-254,271-276
1wf4 d1wf4k2 K:190-199,245-251,250-254,271-276
1we3 d1we3m2 M:190-199,245-251,250-254,271-276
1wf4 d1wf4m2 M:190-199,245-251,250-254,271-276
1wf4 d1wf4i2 I:190-199,245-251,250-254,271-276
1wf4 d1wf4j2 J:190-199,245-251,250-254,271-276
1we3 d1we3h2 H:190-199,245-251,250-254,271-276
1wf4 d1wf4h2 H:190-199,245-251,250-254,271-276
1we3 d1we3i2 I:190-199,245-251,250-254,271-276
1we3 d1we3j2 J:190-199,245-251,250-254,271-276
1aon d1aond2 D:193-201,246-252,251-255,272-278
1aon d1aone2 E:193-201,246-252,251-255,272-278
1aon d1aong2 G:193-200,246-252,251-255,272-278
5. i.16.1 GroE chaperon
GroE chaperon
1gru d1grud_ D:193-201,246-252,251-255,272-278
1gru d1grue_ E:193-201,246-252,251-255,272-278
1gru d1grug_ G:193-200,246-252,251-255,272-278
6. c.69.1 alpha/beta-Hydrolases many members have left-handed crossover connection between strand 8 and additional strand 9 !
alpha/beta-Hydrolases core: 3 layers, a/b/a; mixed beta-sheet of 8 strands, order 12435678, strand 2 is antiparallel to the rest
1jmy d1jmya_ A:81-91,99-104,115-120,136-142
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 37 (enumeration index: query178) of S4
3h8i B:111-115,146-157,240-246,260-270
3h8i A:111-115,146-157,240-246,260-270
2nwc A:196-200,246-252,251-255,272-277
3k1q C:986-990,1092-1096,1114-1121,1130-1140
3k1q B:981-990,1092-1096,1114-1121,1130-1140
2fj0 A:113-121,138-144,156-160,168-174
3h8l B:111-115,146-157,240-246,260-270
3h8l A:111-115,146-157,240-246,260-270
2y6t G:45-52,95-100,132-136,141-148
2y6t H:45-52,95-100,132-136,141-148
2y6t F:45-52,95-100,132-136,141-148
2y6t E:45-52,95-100,132-136,141-148
3e76 C:196-200,246-252,251-255,272-278
3e76 I:196-200,246-252,251-255,272-277
3iyl Y:980-990,1091-1096,1114-1121,1129-1140