| SCOP superfamily ID |
superfamiily description |
corresponding fold description |
| d.26.1 | FKBP-like | FKBP-like core: beta(2)-alpha-beta(2); antiparallel beta-sheet |
| c.95.1 | Thiolase-like | Thiolase-like consists of two similar domains related by pseudo dyad; duplication ! 3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32451; strand 5 is antiparallel to the rest |
| g.10.1 | Hairpin loop containing domain-like the middle part is structurally similar to some knottins and defensins but differs in the disulfide pattern ! | Hairpin loop containing domain-like alpha+beta fold with two crossing loops |
| c.68.1 | Nucleotide-diphospho-sugar transferases | Nucleotide-diphospho-sugar transferases 3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest |
| d.181.1 | Insert subdomain of RNA polymerase alpha subunit | Insert subdomain of RNA polymerase alpha subunit unusual fold; contains a left-handed beta-alpha-beta unit |
| c.56.6 | LigB-like circular permutation of the common fold, most similar to the PNP fold ! | Phosphorylase/hydrolase-like core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops |
| b.62.1 | Cyclophilin-like | Cyclophilin-like barrel, closed; n=8, S=10; complex topology |
| c.74.1 | AraD/HMP-PK domain-like | AraD/HMP-PK domain-like 3 layers: a/b/a; mixed (mostly antiparallel) beta-sheet of 9 strands, order 432159876; left-handed crossover between strands 4 and 5 |
| d.151.1 | DNase I-like | DNase I-like contains beta-sandwich; duplication of alpha+beta motif |
| c.131.1 | Peptidyl-tRNA hydrolase II | Peptidyl-tRNA hydrolase II 3 layers: a/b/a; mixed beta-sheet of 4 strands, order 2143, strand 4 is antiparallel to the rest |
| d.220.1 | Metal cation-transporting ATPase, ATP-binding domain N | Metal cation-transporting ATPase, ATP-binding domain N unusual fold; core: beta-alpha(2)-beta(3)-alpha(2)-beta(2); 6-stranded antiparallel beta-sheet, order: 165432 |
| e.73.1 | CV3147-like | CV3147-like 2 domains; d1: [alpha/beta; 3 layers, a/b/a, mixed beta-sheet of 8 strands, order 12543876, strands 1, 7 and 8 are antiparallel to the rest]; d2: [pseudo beta-barrel of 6 strands, meander] |
| b.77.2 | delta-Endotoxin (insectocide), middle domain | beta-Prism I consists of 3 4-stranded sheets; strands are parallel to the 3-fold axis ! duplication: has internal pseudo threefold symmetry |
| d.70.1 | Yeast killer toxins | Yeast killer toxins beta-alpha-beta(2)-alpha-beta(2); 2 layers, alpha/beta; left-handed crossover connection |
| d.283.1 | Putative modulator of DNA gyrase, PmbA/TldD | Putative modulator of DNA gyrase, PmbA/TldD consists of two different alpha+beta domains; d1: [duplication of alpha-beta(3)-alpha motif; 2 layers: a/b; antiparallel beta-sheet, order: 321456; strands 1, 2, 4 and 5 are twice longer than other secondary structures]; d2 [ complex fold; contains beta-barrel (n=5, S=10)] |
| d.135.1 | The spindle assembly checkpoint protein mad2 N- and C-termini undergo large conformational rearrangement upon ligand binding ! | The spindle assembly checkpoint protein mad2 core: alpha(2)-beta(2)-alpha-beta; mixed sheet: order 213 |
| d.382.1 | PSTPO5379-like | PSTPO5379-like complex fold; consists of two alpha+beta subdomains, one is inserted in the other |
| d.77.1 | RL5-like | RL5-like beta-alpha-beta(2)-alpha-beta(3)-alpha; 2 layers, alpha/beta; antiparallel beta-sheet: order 231654 |
| e.38.1 | Release factor | Release factor 4 domains: (1) 3-helical bundle; (2) alpha+beta of ferredoxin-like fold (3 and 4) alpha+beta of dsRDB-like fold |
| c.76.1 | Alkaline phosphatase-like | Alkaline phosphatase-like core:3 layers: a/b/a; mixed beta-sheet of 8 strands, order 43516728, strand 7 is antiparallel to the rest |
| b.125.1 | Prokaryotic lipoproteins and lipoprotein localization factors | LolA-like prokaryotic lipoproteins and lipoprotein localization factors 11 stranded sheet partly folded in a corner-like structure filled with a few short helices |
| d.252.1 | CheC-like | CheC-like duplication: tandem repeat of two intertwined alpha-beta-(X)-beta(2) motifs |
| d.342.1 | PH1570-like | PH1570-like duplication: two beta(4)-alpha structural repeats, related by pseudo twofold symmetry; two extra helices in the linker region; single 8-standed antiparallel beta-sheet, order: 12348765 |
| d.349.1 | CPE0013-like | CPE0013-like beta(2)-alpha-beta(3); mixed, mostly antiparallel beta-sheet, folded in a half-barrel; order:31254; strand 3 is parallel to strand 1 and is shorter than the rest |
| e.59.1 | FdhE-like | FdhE-like consists on the N-terminal five-helical bundle, a tandem repeat of two rubredoxin-like domains and the C-terminal helix packed together |
| d.281.1 | Hemolytic lectin CEL-III, C-terminal domain | Hemolytic lectin CEL-III, C-terminal domain unusual fold |
| d.182.1 | Baseplate structural protein gp11 | Baseplate structural protein gp11 unusual fold; trimer |
| d.213.1 | VSV matrix protein | VSV matrix protein beta-alpha(2)-beta(4)-alpha-beta(2); two layers: alpha/beta; bifurcated coiled beta-sheet: order of the first 5 strands: 23154 |
| b.48.1 | mu transposase, C-terminal domain | mu transposase, C-terminal domain barrel; n=6, S=8, greek-key |