List of the counted superfamily hits for pattern ID: 38 (enumeration index: query180) of S4

List of the counted superfamily hits for pattern ID: 38 (enumeration index: query180) of S4

SCOP superfamily ID superfamiily description corresponding fold description
e.52.1NAD kinase/diacylglycerol kinase-like NAD kinase/diacylglycerol kinase-like 2 domains: d1 [alpha/beta; related to the PFK N-terminal domain (scop_sf 53784)]; d2 [all-beta; atypical beta-sandwich made of 4 structural repeats of beta(3) unit]
d.219.1PP2C-like contain binuclear metal (Mn) centre ! PP2C-like 4 layers: alpha/beta/beta/alpha; antiparallel beta sheets
d.194.1CNF1/YfiH-like putative cysteine hydrolases CNF1/YfiH-like putative cysteine hydrolases 4 layers: alpha/beta/beta/alpha; mixed beta sheets
b.115.1Calcium-mediated lectin Calcium-mediated lectin sandwich; 9 strands in 2 sheets; greek-key
b.7.1C2 domain (Calcium/lipid-binding domain, CaLB) two constituent families are related by circular permutation ! C2 domain-like sandwich; 8 strands in 2 sheets; greek-key
b.1.16Lamin A/C globular tail domain Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.26.1SMAD/FHA domain has a few short helices inserted in loops ! SMAD/FHA domain sandwich; 11 strands in 2 sheets; greek-key
b.69.6Clathrin heavy-chain terminal domain 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
b.114.1N-utilization substance G protein NusG, insert domain N-utilization substance G protein NusG, insert domain sandwich; 8 strands in 2 sheets; meander
e.62.1Heme iron utilization protein-like Heme iron utilization protein-like 2 domains; d1 - 3-helical bundle similar to the homeodomain-like fold; d2 - 6-stranded beta-barrel capped by two helices at one end, similar topology to the PH-like fold
b.69.14Nucleoporin domain 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
b.95.1Ganglioside M2 (gm2) activator Ganglioside M2 (gm2) activator sandwich; 8 strands in 2 sheets; greek-key: partial topological similarity to immunoglobulin-like folds
b.69.4WD40 repeat-like also contains 8-bladed propellers ! 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
b.128.1Hypothetical protein YojF Hypothetical protein YojF pseudobarrel; capped at one end by an alpha-helix
d.181.1Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit unusual fold; contains a left-handed beta-alpha-beta unit
b.68.1Sialidases 6-bladed beta-propeller consists of six 4-stranded beta-sheet motifs; meander
b.69.1Galactose oxidase, central domain 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
b.110.1Cloacin translocation domain Cloacin translocation domain complex fold made of several coiled beta-sheets
e.1.1Serpins Serpins contains a cluster of helices and a beta-sandwich
b.70.1Quinoprotein alcohol dehydrogenase-like 8-bladed beta-propeller consists of eight 4-stranded beta-sheet motifs; meander ! also found in some members of the WD40-repeat superfamily
b.68.6Calcium-dependent phosphotriesterase 6-bladed beta-propeller consists of six 4-stranded beta-sheet motifs; meander
b.20.1ENV polyprotein, receptor-binding domain ENV polyprotein, receptor-binding domain sandwich; 9 strands in 2 sheets; greek-key; contains a few helices in loop regions
b.166.1MAL13P1.257-like MAL13P1.257-like complex fold; duplication: consists of two intertwinned structural repeats related by pseudo dyad
b.69.12Sema domain irregular 7-bladed beta-propeller with a large insertion in the fifth blade ! 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
b.165.1MOSC N-terminal domain-like MOSC N-terminal domain-like complex fold; comprises a beta-hairpin and a meander 3-stranded sheet packed against beta-barrel: closed, n=5, S=8; contains three short helices
d.332.1RGC domain-like RGC domain-like consists of two beta-sheets and four helices eclosing a cental cavity
b.126.1Adsorption protein p2 Adsorption protein p2 multisheet protein containing partial beta-propeller and beta-sandwich regions
d.182.1Baseplate structural protein gp11 Baseplate structural protein gp11 unusual fold; trimer