List of the counted superfamily hits for pattern ID: 52 (enumeration index: query201) of S4

List of the counted superfamily hits for pattern ID: 52 (enumeration index: query201) of S4

SCOP superfamily ID superfamiily description corresponding fold description
c.72.1Ribokinase-like has extra strand located between strands 2 and 3 ! Ribokinase-like core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest ! potential superfamily: members of this fold have similar functions but different ATP-binding sites
b.66.1Hemopexin-like domain 4-bladed beta-propeller consists of four 4-stranded beta-sheet motifs; meander
b.6.1Cupredoxins contains copper-binding site ! Cupredoxin-like sandwich; 7 strands in 2 sheets, greek-key ! variations: some members have additional 1-2 strands
d.75.2DNA repair protein MutS, domain I MutS N-terminal domain-like beta(2)-alpha-beta(2)-alpha-beta(2); 2 layers, alpha/beta
f.9.1Perfringolysin Perfringolysin 2 domains: (1) alpha+beta; (2) all-beta, similar to the CalB domain fold but the two last strands are transposed
b.92.1Composite domain of metallo-dependent hydrolases this domain is interrupted by the catalytic beta/alpha barrel domain ! Composite domain of metallo-dependent hydrolases pseudobarrel; mixed sheet of 7 strand folded upon itself and "buckled" by two beta-turns
b.68.7Tricorn protease N-terminal domain possibly related to the second domain of tricorn protease (a distorted 7-bladed beta-propeller) ! 6-bladed beta-propeller consists of six 4-stranded beta-sheet motifs; meander
b.68.8Fucose-specific lectin 6-bladed beta-propeller consists of six 4-stranded beta-sheet motifs; meander
e.38.1Release factor Release factor 4 domains: (1) 3-helical bundle; (2) alpha+beta of ferredoxin-like fold (3 and 4) alpha+beta of dsRDB-like fold
b.69.6Clathrin heavy-chain terminal domain 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
b.102.1Methuselah ectodomain duplication: contains two similar sub domains connected by a structured linker ! Methuselah ectodomain complex fold
e.6.1Acyl-CoA dehydrogenase NM domain-like flavoprotein: binds FAD; constituent families differ in the numbers of C-terminal domains (four-helical bundles) ! Acyl-CoA dehydrogenase NM domain-like 2 domains: (1) all-alpha: 5 helices; (2) contains an open beta-sheet barrel: n*=5, S*=8; complex topology
d.116.1YbaK/ProRS associated domain YbaK/ProRS associated domain core: alpha-beta-alpha-beta(2)-(alpha-beta)2-alpha-beta(2)-alpha-beta; 3 layers; bifurcated mixed sheet
c.71.1Dihydrofolate reductase-like Dihydrofolate reductase-like 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 34251687; strand 8 is antiparallel to the rest
b.98.1Leukotriene A4 hydrolase N-terminal domain Leukotriene A4 hydrolase N-terminal domain duplication: two beta-sandwiches of similar topologies are fused together in a single three beta-sheet domain
b.28.1Baculovirus p35 protein has a few helices inserted in loops ! Baculovirus p35 protein sandwich; 14 strands in 2 sheets; greek-key
d.179.1Substrate-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase unusual fold
b.131.1SPOC domain-like SPOC domain-like barrel, closed; n=7, S=10; complex topology
b.85.5Tlp20, baculovirus telokin-like protein similar to dUTPase in fold and trimeric assembly ! beta-clip double-stranded ribbon sharply bent in two places; the ribbon ends form incomplete barrel; jelly-roll
c.51.6XCC0632-like short crossover loop between strands 2 and 3; the antiparallel part of the beta-sheet (strands 3, 4 and 5) and the C-terminal helix are quite longAnticodon-binding domain-like 3 layers: a/b/a; mixed beta-sheet of five strands, order 21345; strand 4 is antiparallel to the rest