1. d.26.1 FKBP-like FKBP-like core: beta(2)-alpha-beta(2); antiparallel beta-sheet 1kt0 d1kt0a3 A:169-177,178-187,211-221,239-249 1qz2 d1qz2a2 A:171-179,180-189,213-223,241-251 1qz2 d1qz2c2 C:171-179,180-188,213-223,241-251 1kt1 d1kt1a3 A:169-177,178-185,211-221,239-249 1p5q d1p5qc2 C:167-179,180-189,213-222,242-250 1q1c d1q1ca1 A:54-62,64-70,99-109,126-135 1y0o d1y0oc1 C:434-442,444-450,485-495,517-527 1n1a d1n1aa_ A:54-62,64-70,100-109,126-135 1q1c d1q1ca2 A:167-179,180-188,213-223,241-251 1p5q d1p5qa2 A:167-179,180-188,213-223,241-251 1p5q d1p5qb2 B:167-179,180-188,213-223,241-251 1fkh d1fkha_ A:23-31,33-39,68-78,95-107 1qz2 d1qz2b2 B:167-179,180-187,213-223,241-251 1d6o d1d6ob_ B:23-31,33-39,68-78,95-107 1fkg d1fkga_ A:23-31,33-39,68-78,95-107 1f40 d1f40a_ A:23-31,33-39,68-78,95-107 1q6h d1q6hb_ B:140-151,153-159,186-196,212-224 1pbk d1pbka_ A:132-140,142-148,184-194,212-224 1bl4 d1bl4a_ A:23-31,33-39,68-78,95-107 1fkd d1fkda_ A:21-31,33-39,68-78,95-107 1q6h d1q6ha_ A:140-151,153-159,186-196,212-224 1bl4 d1bl4b_ B:23-31,33-39,68-78,95-107 1yat d1yata_ A:23-31,33-39,68-78,95-107 1tco d1tcoc_ C:23-31,33-39,68-78,95-107 1fkf d1fkfa_ A:21-31,33-39,68-78,95-107 1fki d1fkib_ B:23-31,33-39,68-78,95-107 1q6i d1q6ia_ A:140-151,153-159,186-196,212-224 1j4i d1j4ia_ A:23-31,33-39,68-78,95-107 1qpl d1qplc_ C:220-231,233-239,268-278,295-307 2fke d2fkea_ A:20-31,33-39,68-78,95-107 1fkl d1fkla_ A:23-31,33-39,68-78,95-107 1fkb d1fkba_ A:23-31,33-39,68-78,95-107 1rot d1rota_ A:53-61,63-68,98-108,125-136 1m5y d1m5ya2 A:172-183,229-235,253-261,263-275 1eym d1eyma_ A:20-31,33-39,68-78,95-107 1pin d1pina2 A:54-63,120-126,143-153,154-163 1m5y d1m5yd2 D:172-183,229-235,253-261,263-275 2f21 d2f21a2 A:54-63,120-126,143-153,154-163 2q5a d2q5aa2 A:54-63,120-126,143-153,154-163 2itk d2itka2 A:54-63,120-126,143-153,154-163 2pv3 d2pv3a2 A:172-183,229-236,252-262,263-272 1eym d1eymb_ B:20-31,33-39,68-78,95-107 1f8a d1f8ab2 B:58-67,124-130,147-157,158-167 1w26 d1w26a3 A:165-173,180-184,207-218,227-238 1nmv d1nmva2 A:54-63,120-126,143-153,154-163 2vrh d2vrha3 A:165-173,180-184,207-218,227-238 1u79 d1u79c_ C:34-42,44-49,85-95,117-127 2pv2 d2pv2b1 B:172-183,229-236,253-261,263-274 1jvw d1jvwa_ A:87-97,99-104,132-142,159-171 1y0o d1y0ob1 B:233-242,244-249,285-295,317-328 1r9h d1r9ha_ A:37-45,47-52,82-92,109-118 1u79 d1u79b_ B:33-42,44-49,85-95,117-128 1m5y d1m5yb2 B:172-183,229-236,253-261,263-274 1fd9 d1fd9a_ A:125-136,138-144,171-181,198-207 1fkt d1fkta_ A:20-31,34-39,68-78,95-107 1u79 d1u79a_ A:33-42,44-49,85-95,117-128 1u79 d1u79d_ D:33-42,44-49,85-95,117-128 2etn d2etnc2 C:87-95,96-106,136-143,144-156 1u79 d1u79e_ E:33-42,44-49,85-95,117-128 2pv3 d2pv3b2 B:172-182,229-236,252-262,263-272 1jns d1jnsa_ A:2-12,47-54,71-79,82-92 2pv1 d2pv1a1 A:173-183,229-235,253-261,263-274 1y0o d1y0oa1 A:34-42,44-49,85-95,117-128 1y0o d1y0oe1 E:833-842,844-849,885-895,917-928 1m5y d1m5yc2 C:172-183,229-236,252-262,263-272 1y0o d1y0od1 D:633-642,644-649,685-695,717-728 2etn d2etnb2 B:87-95,96-105,134-143,144-156 1fks d1fksa_ A:21-31,34-39,69-77,96-107 1ix5 d1ix5a_ A:15-20,22-28,70-80,141-150 1d6o d1d6oa_ A:23-31,33-38,68-78,95-107 1d7h d1d7ha_ A:23-31,33-38,68-78,95-107 1d7h d1d7hb_ B:23-31,33-38,68-78,95-107 1d7j d1d7jb_ B:23-31,33-38,68-78,95-107 2etn d2etna2 A:87-95,96-106,136-143,144-156 1d7j d1d7ja_ A:23-31,33-38,68-78,95-107 1d7i d1d7ib_ B:23-31,33-38,68-78,95-107 1d7i d1d7ia_ A:23-31,33-38,68-78,95-107 1qpl d1qpla_ A:23-31,33-38,68-78,95-107 2ppn d2ppna1 A:23-31,33-38,68-78,95-107 1n1a d1n1ab_ B:54-62,64-70,101-109,126-139 1b6c d1b6cc_ C:23-31,33-38,68-78,95-107 1b6c d1b6cg_ G:23-31,33-38,68-78,95-107 1b6c d1b6ce_ E:23-31,33-38,68-78,95-107 1b6c d1b6ca_ A:23-31,33-38,68-78,95-107 1grj d1grja2 A:89-98,99-109,137-141,148-157 1qpf d1qpfa_ A:23-31,33-38,68-78,95-107 1fkk d1fkka_ A:23-31,33-38,68-78,95-107 1a7x d1a7xa_ A:23-31,33-38,68-78,95-107 1q6i d1q6ib_ B:140-151,153-158,186-196,212-224 1j4r d1j4ra_ A:20-31,33-38,68-78,95-107 3fap d3fapa_ A:21-31,33-38,68-78,95-107 1rou d1roua_ A:50-61,75-80,98-107,126-136 1fkr d1fkra_ A:20-30,45-50,69-77,96-107 1fki d1fkia_ A:23-31,33-38,68-78,95-107 1rou d1roua_ A:50-61,63-68,98-107,126-136 2fap d2fapa_ A:23-31,33-38,68-78,95-107 1nsg d1nsga_ A:23-31,33-38,68-78,95-107 1okg d1okga3 A:323-327,328-332,347-356,358-367 4fap d4fapa_ A:20-31,33-38,68-78,95-107 1fkr d1fkra_ A:20-30,34-39,69-77,96-107 1fap d1fapa_ A:20-31,33-38,68-78,95-107 1jnt d1jnta_ A:3-12,47-53,72-80,81-90 1a7x d1a7xb_ B:20-31,45-50,68-78,95-107 1fkj d1fkja_ A:21-31,33-38,68-78,95-107 1fap d1fapa_ A:20-31,45-50,68-78,95-107 1nmw d1nmwa_ A:53-63,120-127,145-153,154-163 1j4r d1j4rb_ B:20-31,33-38,68-78,95-107 2pv2 d2pv2a1 A:172-183,229-236,253-262,263-274 1j4r d1j4rd_ D:20-31,45-50,68-78,95-107 1q6u d1q6ua_ A:139-151,153-159,186-196,212-221 1qz2 d1qz2b2 B:167-179,187-192,213-223,241-251 2dg3 d2dg3a1 A:23-31,33-38,68-78,95-107 1bkf d1bkfa_ A:20-31,33-38,68-78,95-107 1j4r d1j4rb_ B:20-31,45-50,68-78,95-107 1j4r d1j4ra_ A:20-31,45-50,68-78,95-107 1fkt d1fkta_ A:20-31,45-50,68-78,95-107 2pv2 d2pv2d1 D:172-183,229-236,253-262,263-274 1j4h d1j4ha_ A:23-31,33-38,68-78,95-107 2pv2 d2pv2c1 C:172-183,229-236,254-262,263-274 1bkf d1bkfa_ A:20-31,45-50,68-78,95-107 1qpf d1qpfd_ D:220-231,245-250,268-278,295-307 1j4r d1j4rd_ D:20-31,33-38,68-78,95-107 1q6h d1q6ha_ A:140-151,165-170,186-196,212-224 1qpf d1qpfd_ D:220-231,233-238,268-278,295-307 2fke d2fkea_ A:20-31,45-50,68-78,95-107 1a7x d1a7xb_ B:20-31,33-38,68-78,95-107 1qpl d1qplc_ C:220-231,245-250,268-278,295-307 1c9h d1c9ha_ A:20-31,45-50,68-78,95-107 4fap d4fapa_ A:20-31,45-50,68-78,95-107 1eym d1eymb_ B:20-31,45-50,68-78,95-107 1q6h d1q6hb_ B:140-151,165-170,186-196,212-224 2f23 d2f23b2 B:86-95,96-106,136-142,145-156 1q6i d1q6ia_ A:140-151,165-170,186-196,212-224 1c9h d1c9ha_ A:20-31,33-38,68-78,95-107 1eym d1eyma_ A:20-31,45-50,68-78,95-107 1q6u d1q6ua_ A:139-151,165-170,186-196,212-221 1fkj d1fkja_ A:21-31,45-49,68-78,95-107 1fkf d1fkfa_ A:21-31,45-49,68-78,95-107 1fkd d1fkda_ A:21-31,45-49,68-78,95-107 3fap d3fapa_ A:21-31,45-49,68-78,95-107 1q6i d1q6ib_ B:140-151,165-170,186-196,212-224 1fks d1fksa_ A:21-31,45-49,69-77,96-107 1fd9 d1fd9a_ A:125-136,150-155,171-181,198-207 1jvw d1jvwa_ A:87-97,111-115,132-142,159-171 2eul d2eulb2 B:86-95,96-106,136-143,144-156 2eul d2euld2 D:86-95,96-106,136-143,144-156 2eul d2eula2 A:86-95,96-106,136-143,144-156 2eul d2eulc2 C:86-95,96-106,136-143,144-156 1r9h d1r9ha_ A:37-45,59-65,82-92,109-118 1rot d1rota_ A:53-61,75-81,98-108,125-136 1q1c d1q1ca1 A:54-62,76-82,99-109,126-135 2f23 d2f23a2 A:86-95,96-106,136-143,148-156 1n1a d1n1aa_ A:54-62,76-82,100-109,126-135 1y0o d1y0oc1 C:434-442,456-462,485-495,517-527 1u79 d1u79c_ C:34-42,56-62,85-95,117-127 2dg3 d2dg3a1 A:23-31,45-51,68-78,95-107 1u79 d1u79b_ B:33-42,56-62,85-95,117-128 2ppn d2ppna1 A:23-31,45-51,68-78,95-107 1fki d1fkia_ A:23-31,45-51,68-78,95-107 1bl4 d1bl4b_ B:23-31,45-51,68-78,95-107 1fkl d1fkla_ A:23-31,45-51,68-78,95-107 1u79 d1u79a_ A:33-42,56-62,85-95,117-128 1bl4 d1bl4a_ A:23-31,45-51,68-78,95-107 1d6o d1d6ob_ B:23-31,45-51,68-78,95-107 1d7h d1d7hb_ B:23-31,45-51,68-78,95-107 1y0o d1y0oa1 A:34-42,56-62,85-95,117-128 1d7h d1d7ha_ A:23-31,45-51,68-78,95-107 1j4h d1j4ha_ A:23-31,45-51,68-78,95-107 1u79 d1u79d_ D:33-42,56-62,85-95,117-128 1d7i d1d7ib_ B:23-31,45-51,68-78,95-107 1fki d1fkib_ B:23-31,45-51,68-78,95-107 1nsg d1nsga_ A:23-31,45-51,68-78,95-107 2fap d2fapa_ A:23-31,45-51,68-78,95-107 1y0o d1y0ob1 B:233-242,256-262,285-295,317-328 1d6o d1d6oa_ A:23-31,45-51,68-78,95-107 1tco d1tcoc_ C:23-31,45-51,68-78,95-107 1b6c d1b6ce_ E:23-31,45-51,68-78,95-107 1b6c d1b6cg_ G:23-31,45-51,68-78,95-107 1b6c d1b6cc_ C:23-31,45-51,68-78,95-107 1b6c d1b6ca_ A:23-31,45-51,68-78,95-107 1d7j d1d7jb_ B:23-31,45-51,68-78,95-107 1y0o d1y0oe1 E:833-842,856-862,885-895,917-928 1u79 d1u79e_ E:33-42,56-62,85-95,117-128 1fkb d1fkba_ A:23-31,45-51,68-78,95-107 1d7j d1d7ja_ A:23-31,45-51,68-78,95-107 1f40 d1f40a_ A:23-31,45-51,68-78,95-107 1fkg d1fkga_ A:23-31,45-51,68-78,95-107 1a7x d1a7xa_ A:23-31,45-51,68-78,95-107 1d7i d1d7ia_ A:23-31,45-51,68-78,95-107 1fkk d1fkka_ A:23-31,45-51,68-78,95-107 1qpl d1qpla_ A:23-31,45-51,68-78,95-107 1y0o d1y0od1 D:633-642,656-662,685-695,717-728 1fkh d1fkha_ A:23-31,45-51,68-78,95-107 1j4i d1j4ia_ A:23-31,45-51,68-78,95-107 1l1p d1l1pa_ A:18-24,41-47,64-75,89-102 1yat d1yata_ A:23-31,45-51,68-78,95-107 1qpf d1qpfa_ A:23-31,45-51,68-78,95-107 1pbk d1pbka_ A:132-140,161-167,184-194,212-224 1t11 d1t11b3 B:165-173,180-184,209-217,229-245 1kt1 d1kt1a3 A:169-177,185-190,211-221,239-249 1hxv d1hxva_ A:33-45,56-62,79-90,104-113 1kt1 d1kt1a2 A:54-61,76-82,99-107,128-140 1m5y d1m5yc3 C:283-293,339-345,363-372,377-385 1m5y d1m5yb3 B:283-293,339-345,363-372,377-385 1m5y d1m5yd3 D:280-293,339-345,362-372,377-388 1m5y d1m5ya3 A:282-293,339-345,362-372,377-386 1l1p d1l1pa_ A:24-29,37-41,64-75,89-102 1t11 d1t11a3 A:165-173,180-184,209-218,231-245 1kt0 d1kt0a2 A:54-61,76-82,99-109,131-140 2. d.161.1 ADC synthase the active site is formed by additional structures inserted into the core structure ! ADC synthase duplication: contains four repeats of alpha-beta(2)-beta motif arranged in a 4 layer core structure: alpha/beta/beta/alpha; orthogonally packed beta-sheets 2g5f d2g5fd1 D:61-68,69-76,104-112,128-139 2i6y d2i6ya1 A:61-68,69-76,104-112,128-139 2g5f d2g5fc1 C:61-68,69-76,104-112,128-139 2g5f d2g5fa1 A:61-68,69-76,104-112,128-139 2g5f d2g5fb1 B:61-68,69-75,104-112,128-139 1k0e d1k0ea_ A:53-61,62-69,104-112,132-139 1i1q d1i1qa_ A:55-65,66-73,144-152,172-180 1k0g d1k0gb_ B:53-61,62-69,104-112,133-139 1i7q d1i7qc_ C:55-65,66-73,144-152,171-180 1i7s d1i7sa_ A:55-65,66-73,144-152,171-180 1i7q d1i7qa_ A:55-65,66-73,144-152,171-180 1i7s d1i7sc_ C:55-65,66-73,144-152,171-180 1k0g d1k0ga_ A:53-61,62-69,104-112,132-139 3bzn d3bzna1 A:239-247,248-261,369-377,378-386 2eua d2euaa1 A:239-247,248-261,369-377,378-386 2i6y d2i6ya1 A:250-259,261-267,385-394,396-404 3bzm d3bzma1 A:239-247,248-261,369-377,378-386 2g5f d2g5fd1 D:251-259,261-274,386-394,396-404 1k0e d1k0eb_ B:53-61,62-69,104-112,132-139 2eua d2euab1 B:239-247,248-261,369-377,378-386 1k0e d1k0eb_ B:258-265,266-271,391-399,401-409 2g5f d2g5fc1 C:252-259,261-274,386-394,396-404 1k0g d1k0ga_ A:258-265,266-271,391-399,401-409 1qdl d1qdla_ A:225-232,233-246,358-366,368-376 1k0g d1k0gb_ B:258-265,266-271,391-399,401-409 1k0e d1k0ea_ A:258-265,266-279,391-399,401-409 2fn1 d2fn1b1 B:240-247,248-261,373-381,382-390 2fn0 d2fn0b1 B:240-247,248-261,373-381,382-390 2g5f d2g5fa1 A:252-259,261-274,386-394,396-404 2fn0 d2fn0a1 A:240-247,248-261,373-381,382-390 2g5f d2g5fb1 B:252-259,261-274,386-394,396-404 2fn1 d2fn1a1 A:240-247,248-261,373-381,382-390 2fn0 d2fn0a1 A:48-55,59-65,93-100,116-126 2fn1 d2fn1a1 A:48-55,59-65,93-100,116-126 2fn0 d2fn0b1 B:48-55,59-65,93-100,116-126 2fn1 d2fn1b1 B:48-55,59-65,93-100,116-126 1i1q d1i1qa_ A:311-317,318-332,450-458,460-467 1i7q d1i7qa_ A:309-317,318-332,450-458,460-467 1i7q d1i7qc_ C:309-317,318-332,450-458,460-467 1i7s d1i7sa_ A:310-317,318-332,450-458,460-468 1i7s d1i7sc_ C:310-317,318-332,450-458,460-468 3. e.3.1 beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like contains a cluster of helices and an alpha+beta sandwich 1sde d1sdea_ A:24-33,34-43,304-312,316-325 1scw d1scwa_ A:24-33,34-43,304-312,316-325 1yqs d1yqsa1 A:24-33,34-43,304-312,316-325 1hvb d1hvba_ A:24-33,34-43,304-312,316-325 1pw1 d1pw1a_ A:24-33,34-43,304-312,316-325 1iki d1ikia_ A:24-33,34-43,304-312,316-325 1pwc d1pwca_ A:24-33,34-43,304-312,316-325 1pwg d1pwga_ A:24-33,34-43,304-312,316-325 1ceg d1cega_ A:24-33,34-43,304-312,316-325 1pwd d1pwda_ A:24-33,34-43,304-312,316-325 1pw8 d1pw8a_ A:24-33,34-43,304-312,316-325 1mpl d1mpla_ A:24-33,34-43,304-312,316-325 1ikg d1ikga_ A:24-33,34-43,304-312,316-325 3pte d3ptea_ A:24-33,34-43,304-312,316-325 1wyc d1wyca1 A:81-90,91-101,346-355,356-365 1wyb d1wyba1 A:81-90,91-101,346-355,356-365 1cef d1cefa_ A:24-33,34-43,304-312,316-326 2dcf d2dcfa1 A:81-90,91-101,346-355,356-365 1u60 d1u60a_ A:41-48,50-57,263-271,273-281 1u60 d1u60c_ C:41-48,50-57,263-271,273-281 2zc4 d2zc4b1 B:287-297,298-308,568-577,581-591 1u60 d1u60b_ B:41-48,50-57,263-271,273-281 1u60 d1u60d_ D:41-48,50-57,263-271,273-281 3brm d3brmb1 B:48-56,58-65,272-281,291-300 2efu d2efua1 A:21-30,31-41,313-323,324-334 1ci9 d1ci9b_ B:36-45,46-56,353-361,362-371 2efu d2efud1 D:21-30,34-41,313-323,324-334 1k25 d1k25b4 B:1287-1297,1298-1307,1566-1577,1581-1591 1mwt d1mwtb3 B:344-352,354-364,612-622,626-635 1ci9 d1ci9a_ A:36-45,46-56,352-361,362-371 1ci8 d1ci8a_ A:36-45,46-56,352-361,362-371 2dns d2dnsb1 B:21-30,34-41,313-323,324-334 1ci8 d1ci8b_ B:36-45,46-56,352-361,362-371 2efx d2efxd1 D:21-30,34-41,313-323,324-334 2z2l d2z2lb1 B:287-297,298-308,566-577,581-591 2drw d2drwd1 D:21-30,34-41,313-323,324-334 2dns d2dnsd1 D:21-30,34-41,313-323,324-334 2zc4 d2zc4e1 E:287-297,298-308,566-577,581-591 1k25 d1k25d4 D:3287-3297,3298-3307,3566-3577,3581-3591 1qme d1qmea4 A:287-297,298-307,566-577,581-591 2z2l d2z2le1 E:287-297,298-308,566-577,581-591 2drw d2drwa1 A:21-30,31-41,313-323,324-334 2efu d2efub1 B:21-30,34-41,313-323,324-334 1mwu d1mwub3 B:344-353,354-364,615-622,627-633 1rp5 d1rp5b4 B:287-297,298-307,566-577,581-591 1k25 d1k25c4 C:2287-2297,2298-2307,2566-2577,2582-2591 2osu d2osub1 B:48-56,58-65,272-282,290-300 2efx d2efxa1 A:21-30,31-41,313-323,324-334 3brm d3brma1 A:48-56,58-65,272-282,290-300 2zc3 d2zc3b1 B:287-297,298-307,566-577,581-591 2dns d2dnsa1 A:21-30,31-41,313-323,324-334 1pyy d1pyya4 A:287-297,298-307,566-577,581-591 1mki d1mkib_ B:48-56,58-65,272-282,290-300 2zc3 d2zc3e1 E:287-297,298-307,566-577,581-591 1rp5 d1rp5a4 A:287-297,298-307,566-577,581-591 1mki d1mkia_ A:48-56,58-65,272-282,290-300 2osu d2osua1 A:48-56,58-65,272-282,290-300 1iyq d1iyqa_ A:42-52,53-61,242-252,257-267 2z2m d2z2mb1 B:287-297,298-307,566-577,581-591 2efx d2efxc1 C:21-30,31-41,313-323,324-334 1xp4 d1xp4b2 B:30-38,39-47,247-257,258-269 1xp4 d1xp4d2 D:30-38,39-47,247-257,258-267 2drw d2drwc1 C:21-30,31-41,313-323,324-334 1k25 d1k25a4 A:287-297,298-307,566-577,582-591 1qmf d1qmfa4 A:287-297,298-307,566-577,581-591 2z2m d2z2me1 E:287-297,298-308,566-577,581-591 2efx d2efxb1 B:21-30,31-41,313-323,324-334 1nzo d1nzoa2 A:18-26,27-35,221-231,232-243 2fff d2fffb1 B:420-430,431-440,660-667,669-678 1hzo d1hzob_ B:42-52,53-61,242-252,257-267 3bec d3beca2 A:18-26,27-35,221-231,232-243 1esi d1esia_ A:9-17,18-26,221-231,232-241 1hzo d1hzoa_ A:42-52,53-61,242-252,257-267 1pmd d1pmda4 A:287-297,298-308,566-577,581-591 1nzu d1nzua2 A:18-26,27-35,221-231,232-243 2bg1 d2bg1a1 A:420-430,431-440,660-667,669-678 2dns d2dnsc1 C:21-30,31-41,313-323,324-334 2blm d2blmb_ B:42-52,53-61,242-252,257-267 1nj4 d1nj4a2 A:18-26,27-35,221-231,232-243 2efu d2efuc1 C:21-30,31-41,313-323,324-334 2efx d2efxe1 E:21-30,31-41,313-323,324-334 2drw d2drwb1 B:21-30,31-41,313-323,324-334 1z6f d1z6fa2 A:18-26,27-35,221-231,232-243 1iyo d1iyoa_ A:42-52,53-61,242-252,257-267 2uwx d2uwxa1 A:420-430,431-440,660-667,669-678 1xp4 d1xp4a2 A:30-38,39-47,247-257,258-267 2c5w d2c5wb1 B:327-337,338-347,578-588,590-599 2drw d2drwe1 E:21-30,31-41,313-323,324-334 1fr1 d1fr1b_ B:25-35,37-45,321-331,332-342 1hd8 d1hd8a2 A:18-26,27-35,221-231,232-243 2efu d2efuf1 F:21-30,31-41,313-323,324-334 1bza d1bzaa_ A:42-52,53-61,242-252,257-267 1iys d1iysa_ A:42-52,53-61,242-252,257-267 1sdn d1sdna2 A:18-26,27-35,221-231,232-243 2olv d2olva2 A:357-368,369-378,602-613,615-625 2efu d2efue1 E:21-30,31-41,313-323,324-334 1xp4 d1xp4c2 C:30-38,39-47,247-257,258-267 3beb d3beba2 A:18-26,27-35,221-231,232-243 1iyp d1iypa_ A:42-52,53-61,242-252,257-267 1j9m d1j9ma_ A:9-17,18-26,221-231,232-243 2drw d2drwf1 F:21-30,31-41,313-323,324-334 1fr6 d1fr6b_ B:25-35,37-45,321-331,332-342 2c6w d2c6wb1 B:327-337,338-347,578-588,590-599 2dns d2dnse1 E:21-30,31-41,313-323,324-334 1es2 d1es2a_ A:9-17,18-26,221-231,232-243 1es5 d1es5a_ A:9-17,18-26,221-231,232-243 2olu d2olua2 A:357-368,369-378,602-613,615-625 1ei5 d1ei5a3 A:23-32,34-43,293-303,304-314 1skf d1skfa_ A:9-17,18-26,221-231,232-242 1mwu d1mwua3 A:344-353,354-364,613-622,626-635 1fr6 d1fr6a_ A:26-35,37-45,321-331,332-342 1o7e d1o7ea_ A:42-52,53-61,242-253,257-267 1alq d1alqa_ A:258-267,42-52,229-238,242-252 3dwk d3dwkc2 C:357-368,369-378,602-613,615-625 1vm1 d1vm1a_ A:41-52,53-61,242-251,258-267 1n4o d1n4oa_ A:42-52,53-61,242-253,257-267 1es4 d1es4a_ A:9-17,18-26,221-231,232-242 3dwk d3dwkb2 B:357-368,369-378,602-613,615-625 1n4o d1n4ob_ B:42-52,53-61,242-253,258-267 3dwk d3dwkd2 D:357-368,369-378,602-613,615-625 1htz d1htzb_ B:42-52,53-61,242-254,258-267 3dwk d3dwka2 A:357-368,369-378,602-613,615-625 1dy6 d1dy6b_ B:42-52,53-61,241-252,257-268 2olv d2olvb2 B:357-368,369-378,603-613,615-625 1kvm d1kvma_ A:26-35,37-45,321-331,332-342 1xx2 d1xx2a_ A:26-35,36-45,321-331,332-342 1kvm d1kvmb_ B:26-35,37-45,321-331,332-342 1mws d1mwsa3 A:344-353,354-364,613-622,626-635 1kdw d1kdwa_ A:26-35,37-45,321-331,332-342 1htz d1htzd_ D:42-52,53-61,242-254,258-267 1htz d1htze_ E:42-52,53-61,242-254,258-267 1fco d1fcoa_ A:23-32,34-42,318-328,329-339 1bls d1blsa_ A:26-35,37-45,321-331,332-342 1o7e d1o7eb_ B:42-52,53-61,242-253,258-267 1l0e d1l0ea_ A:26-35,37-45,321-331,332-342 2rcx d2rcxa1 A:26-35,37-45,321-331,332-342 1ke0 d1ke0a_ A:26-35,37-45,321-331,332-342 1ga9 d1ga9a_ A:26-35,37-45,321-331,332-342 1ke3 d1ke3b_ B:26-35,37-45,321-331,332-342 1rgy d1rgya_ A:26-35,37-45,321-331,332-342 1pi5 d1pi5a_ A:26-35,37-45,321-331,332-342 1bls d1blsb_ B:26-35,36-45,321-331,332-342 1htz d1htzc_ C:42-52,53-61,242-254,258-267 1ga0 d1ga0a_ A:26-35,36-45,324-334,335-345 1xx2 d1xx2b_ B:1026-1035,1036-1045,1321-1331,1332-1342 2hdq d2hdqb1 B:26-35,37-45,321-331,332-342 1fsw d1fswa_ A:26-35,37-45,321-331,332-342 1ke3 d1ke3a_ A:26-35,37-45,321-331,332-342 1es3 d1es3a_ A:9-17,18-26,221-231,232-242 1pi4 d1pi4a_ A:26-35,37-45,321-331,332-342 1htz d1htzf_ F:41-52,53-61,242-252,258-267 1w5d d1w5da1 A:24-34,35-43,417-427,431-441 1fsy d1fsyb_ B:26-35,37-45,321-331,332-342 1mxo d1mxoa_ A:26-35,37-45,321-331,332-342 1llb d1llba_ A:26-35,37-45,321-331,332-342 1l0d d1l0da_ A:26-35,37-45,321-331,332-342 2hdq d2hdqa1 A:26-35,37-45,321-331,332-342 1ga9 d1ga9b_ B:27-35,37-44,321-331,332-342 1my8 d1my8a_ A:26-35,37-45,321-331,332-342 1rgz d1rgza_ A:26-35,36-45,324-334,335-345 1ll9 d1ll9a_ A:26-35,37-45,321-331,332-342 1dy6 d1dy6a_ A:41-52,53-61,241-252,257-268 1llb d1llbb_ B:26-35,37-45,321-331,332-342 1l0f d1l0fa_ A:26-35,37-45,321-331,332-342 1tvf d1tvfa2 A:50-57,59-66,267-277,278-289 2hds d2hdsa1 A:26-35,37-45,321-331,332-342 1iem d1iema_ A:26-35,37-45,321-331,332-342 2hdr d2hdra1 A:26-35,37-45,321-331,332-342 2pu2 d2pu2a1 A:26-35,37-45,321-331,332-342 1fcn d1fcna_ A:23-32,34-42,318-328,329-339 4blm d4blma_ A:42-52,53-61,241-252,257-268 1i5q d1i5qa_ A:26-35,37-45,321-331,332-342 2pu4 d2pu4a1 A:26-35,37-45,321-331,332-342 2r9w d2r9wb1 B:26-35,37-45,321-331,332-342 1my8 d1my8b_ B:26-35,37-45,321-331,332-342 1ke4 d1ke4a_ A:26-35,37-45,321-331,332-342 1pi4 d1pi4b_ B:26-35,37-45,321-331,332-342 2hds d2hdsb1 B:26-35,37-45,321-331,332-342 1iel d1ielb_ B:26-35,37-45,321-331,332-342 2r9x d2r9xb1 B:26-35,37-45,321-331,332-342 1l2s d1l2sb_ B:26-35,37-45,321-331,332-342 1onh d1onha_ A:26-35,36-45,324-334,335-345 1q2q d1q2qa_ A:26-35,36-45,324-334,335-345 2hdu d2hdua1 A:26-35,37-45,321-331,332-342 2pu4 d2pu4b1 B:26-35,37-45,321-331,332-342 2p9v d2p9va1 A:26-35,37-45,321-331,332-342 1l2s d1l2sa_ A:26-35,37-45,321-331,332-342 2r9w d2r9wa1 A:26-35,37-45,321-331,332-342 1l0g d1l0ga_ A:26-35,37-45,321-331,332-342 2ffy d2ffya1 A:26-35,37-45,321-331,332-342 2pu2 d2pu2b1 B:26-35,37-45,321-331,332-342 1i5q d1i5qb_ B:26-35,37-45,321-331,332-342 2blm d2blma_ A:42-52,53-61,241-252,257-268 1fsy d1fsya_ A:26-35,37-45,321-331,332-342 1l0d d1l0db_ B:26-35,37-45,321-331,332-342 2q9n d2q9na1 A:26-35,36-45,321-331,332-342 1iel d1iela_ A:26-35,37-45,321-331,332-342 1ll5 d1ll5a_ A:26-35,37-45,321-331,332-342 1tvf d1tvfb2 B:50-57,59-66,267-277,278-289 2hdu d2hdub1 B:26-35,37-45,321-331,332-342 2p9v d2p9vb1 B:26-35,37-45,321-331,332-342 1l0f d1l0fb_ B:26-35,37-45,321-331,332-342 1xgi d1xgia1 A:26-35,37-45,321-331,332-342 1pi5 d1pi5b_ B:26-35,37-45,321-331,332-342 2r9x d2r9xa1 A:26-35,37-45,321-331,332-342 2ffy d2ffyb1 B:26-35,37-45,321-331,332-342 1htz d1htza_ A:42-52,53-61,242-254,258-267 1mwr d1mwrb3 B:344-353,354-364,612-622,626-635 1kvl d1kvlb_ B:26-35,37-45,321-331,332-342 1o07 d1o07a_ A:26-35,37-45,321-331,332-342 1c3b d1c3ba_ A:26-35,37-45,321-331,332-342 1l0e d1l0eb_ B:26-35,37-45,321-331,332-342 1ke4 d1ke4b_ B:26-35,37-45,321-331,332-342 2q9m d2q9ma1 A:26-35,36-45,321-331,332-342 1kvl d1kvla_ A:26-35,37-45,321-331,332-342 1mwt d1mwta3 A:344-352,354-364,612-622,627-635 2i72 d2i72a1 A:26-35,37-45,321-331,332-342 1xgj d1xgja1 A:26-35,37-45,321-331,332-342 1ll9 d1ll9b_ B:26-35,37-45,321-331,332-342 1w8q d1w8qb1 B:21-31,32-40,416-427,428-439 1kds d1kdsb_ B:26-35,37-45,321-331,332-342 2hdr d2hdrb1 B:26-35,37-45,321-331,332-342 1gce d1gcea_ A:26-35,36-45,324-334,335-345 1ll5 d1ll5b_ B:26-35,37-45,321-331,332-342 2rcx d2rcxb1 B:26-35,37-45,321-331,332-342 1kds d1kdsa_ A:26-35,37-45,321-331,332-342 2i72 d2i72b1 B:26-35,37-45,321-331,332-342 1kdw d1kdwb_ B:26-35,37-45,321-331,332-342 1fr1 d1fr1a_ A:26-35,37-45,321-331,332-342 1iem d1iemb_ B:26-35,37-45,321-331,332-342 2cc1 d2cc1a1 A:41-52,53-61,242-254,256-268 1w8q d1w8qc1 C:21-31,32-40,416-427,428-439 2bls d2blsb_ B:26-35,37-45,321-331,332-342 2bls d2blsa_ A:26-35,37-45,321-331,332-342 1o07 d1o07b_ B:26-35,37-45,321-331,332-342 1w8y d1w8yc1 C:21-31,32-40,416-427,428-439 1mwr d1mwra3 A:344-353,354-363,612-622,627-635 1ke0 d1ke0b_ B:26-35,37-45,321-331,332-342 1s6r d1s6ra_ A:26-35,37-45,321-331,332-342 1fcm d1fcma_ A:23-32,34-42,318-328,329-339 1djc d1djca_ A:42-52,53-61,242-253,258-267 1xa1 d1xa1c_ C:29-39,40-47,207-218,219-231 4blm d4blmb_ B:42-52,53-61,242-254,257-267 1i2w d1i2wa_ A:42-52,53-61,241-254,257-268 1vqq d1vqqa3 A:344-353,354-364,612-622,627-635 1mws d1mwsb3 B:344-353,354-364,612-622,627-635 1w8y d1w8yb1 B:21-31,33-40,416-427,428-439 1mbl d1mbla_ A:42-52,53-61,242-254,257-267 1ghp d1ghpa_ A:42-52,53-61,242-253,258-267 1mbl d1mblb_ B:42-52,53-61,242-254,257-267 1w8q d1w8qa1 A:20-31,32-40,416-427,428-439 1i2s d1i2sa_ A:42-52,53-61,241-254,257-268 1i2s d1i2sb_ B:42-52,53-61,241-254,257-268 2j9p d2j9pb1 B:24-34,35-43,417-428,430-441 1vqq d1vqqb3 B:344-353,354-364,612-622,627-635 1w8y d1w8ya1 A:20-31,32-40,416-427,428-439 1i2w d1i2wb_ B:42-52,53-61,241-254,257-268 1blc d1blca_ A:42-52,53-61,242-253,258-267 1w79 d1w79a1 A:20-31,32-40,416-427,428-439 1xa7 d1xa7a_ A:29-39,40-47,207-218,219-231 1pio d1piob_ B:42-52,53-61,242-253,258-267 1ghm d1ghma_ A:42-52,53-61,242-253,258-267 1kge d1kgea_ A:42-52,53-61,242-253,258-267 1dja d1djaa_ A:42-52,53-61,242-253,258-267 1pio d1pioa_ A:42-52,53-61,242-253,258-267 1g6a d1g6aa_ A:43-52,53-61,242-254,255-267 1n9b d1n9ba_ A:41-52,53-61,242-254,258-267 1ny0 d1ny0a_ A:41-52,53-61,242-254,258-267 1djb d1djba_ A:42-52,53-61,242-253,258-267 1w79 d1w79b1 B:20-31,32-40,416-427,428-439 1w79 d1w79c1 C:20-31,32-40,416-427,428-439 2j9p d2j9pa1 A:24-34,35-43,417-428,430-441 1bsg d1bsga_ A:43-52,53-61,241-254,255-268 1g68 d1g68a_ A:43-52,53-61,242-254,255-267 1jtd d1jtda_ A:41-52,53-61,241-252,256-265 3blm d3blma_ A:42-52,53-61,242-253,258-267 1fqg d1fqga_ A:41-52,53-61,241-252,256-266 1ghi d1ghia_ A:42-52,53-61,242-253,258-267 1jtg d1jtgc_ C:41-52,53-61,241-252,256-265 1ck3 d1ck3a_ A:41-52,53-61,242-254,258-267 1shv d1shva_ A:41-52,53-61,242-254,258-267 1xpb d1xpba_ A:41-51A,52-61,242-254,258-267 1jwp d1jwpa_ A:41-52,53-61,242-254,258-267 1w79 d1w79d1 D:20-31,32-40,416-427,428-439 1nyy d1nyya_ A:41-52,53-61,242-254,258-267 1xa1 d1xa1b_ B:29-39,40-47,204-218,219-231 1blh d1blha_ A:42-52,53-61,242-253,258-267 1nym d1nyma_ A:41-52,53-61,242-254,258-267 1lhy d1lhya_ A:41-52,53-61,242-254,258-268 1jvj d1jvja_ A:41-52,53-61,242-254,258-267 1bue d1buea_ A:42-52,53-61,241-253,255-268 1w8y d1w8yd1 D:20-31,32-40,416-427,428-439 3c7u d3c7uc1 C:41-52,53-61,241-252,256-265 1erm d1erma_ A:41-52,53-61,241-252,256-265 1blp d1blpa_ A:42-52,53-61,241-253,258-267 1bul d1bula_ A:42-52,53-61,241-253,255-268 1xa1 d1xa1a_ A:29-39,40-47,204-218,219-231 3c7v d3c7vc1 C:41-52,53-61,241-252,256-265 1ong d1onga_ A:41-52,53-61,242-254,258-267 3c7v d3c7va1 A:41-52,53-61,241-252,256-265 1xa7 d1xa7b_ B:31-38,41-47,204-218,219-229 1nxy d1nxya_ A:41-52,53-61,242-254,258-267 1jwv d1jwva_ A:41-52,53-61,242-254,258-267 1jtg d1jtga_ A:41-52,53-61,241-252,256-265 1xa1 d1xa1d_ D:29-39,40-47,204-218,219-231 1rcj d1rcja_ A:41-52,53-61,242-254,258-267 2h5s d2h5sa1 A:41-52,53-61,242-254,258-267 1tem d1tema_ A:41-52,53-61,242-254,258-267 2a3u d2a3ua1 A:41-52,53-61,242-254,258-267 2ex6 d2ex6a1 A:34-43,48-53,423-434,436-447 1bt5 d1bt5a_ A:41-52,53-61,242-254,258-267 2ex8 d2ex8a1 A:34-43,48-53,423-434,436-447 1m40 d1m40a_ A:41-52,53-61,242-254,258-267 1zg4 d1zg4a1 A:41-52,53-61,242-254,258-267 3c7u d3c7ua1 A:41-52,53-61,241-252,256-265 1li0 d1li0a_ A:41-52,53-61,242-254,258-267 1esu d1esua_ A:41-51A,52-61,242-254,258-267 1axb d1axba_ A:41-52,53-61,242-254,258-267 2g2w d2g2wa1 A:41-52,53-61,242-254,258-267 2ex9 d2ex9a1 A:34-43,48-53,423-434,436-447 2zd8 d2zd8a1 A:41-52,53-61,242-254,258-267 2exa d2exaa1 A:34-43,48-53,423-434,436-447 1kgf d1kgfa_ A:42-52,53-61,242-253,258-267 1w8q d1w8qd1 D:20-31,32-40,416-427,428-439 2g2u d2g2ua1 A:41-52,53-61,242-254,258-267 1pzo d1pzoa_ A:41-52,53-61,242-254,258-267 2ex2 d2ex2a1 A:34-43,48-53,423-434,436-447 3c4p d3c4pa1 A:41-52,53-61,242-254,258-267 1pzp d1pzpa_ A:41-52,53-61,242-254,258-267 2exb d2exba1 A:34-43,48-53,423-434,436-447 1tdg d1tdga_ A:41-52,53-61,242-254,258-267 2a49 d2a49a1 A:41-52,53-61,242-254,258-267 1tdl d1tdla_ A:41-52,53-61,242-254,258-267 1xkz d1xkzd_ D:359-369,370-377,534-548,549-561 1xkz d1xkzc_ C:359-369,370-377,534-548,549-561 1erq d1erqa_ A:41-52,53-61,241-252,256-265 1ero d1eroa_ A:41-52,53-61,241-252,256-265 1s0w d1s0wb_ B:41-52,53-61,241-252,256-265 2b5r d2b5ra1 A:41-52,53-61,241-252,256-265 1q2p d1q2pa_ A:41-52,53-61,242-254,258-267 1k38 d1k38a_ A:36-45,51-55,211-222,223-234 1li9 d1li9a_ A:41-52,53-61,242-254,258-267 1btl d1btla_ A:41-52,53-61,242-254,258-267 1xkz d1xkza_ A:359-369,370-377,534-548,549-561 1xkz d1xkzb_ B:359-369,370-377,534-548,549-561 1k38 d1k38b_ B:36-45,51-55,211-222,223-234 1jwz d1jwza_ A:42-52,53-61,242-254,258-268 2b5r d2b5rb1 B:42-52,53-61,241-252,256-265 1s0w d1s0wa_ A:41-52,53-61,241-252,256-265 1ome d1omea_ A:41-52,53-61,242-253,258-268 1nrf d1nrfa_ A:372-382,383-390,549-561,562-574 1m6k d1m6ka_ A:34-46,47-55,224-236,238-250 1m6k d1m6kb_ B:34-46,47-55,224-236,238-250 1e25 d1e25a_ A:41-51,56-61,242-253,256-269 1h8y d1h8yb_ B:38-46,50-54,216-229,230-240 1ewz d1ewzc_ C:38-46,50-54,215-229,230-240 1k4e d1k4ea_ A:38-47,48-54,215-229,230-240 1k6s d1k6sb_ B:38-47,48-54,215-229,230-240 1k57 d1k57a_ A:38-46,50-54,215-229,230-240 1k57 d1k57c_ C:38-46,50-54,215-229,230-240 1ewz d1ewzd_ D:38-46,50-54,215-229,230-240 1k57 d1k57d_ D:38-46,50-54,215-229,230-240 1k4f d1k4fb_ B:38-47,48-54,215-229,230-240 1k4e d1k4eb_ B:38-47,48-54,215-229,230-240 3c4o d3c4oa1 A:43-52,53-61,241-254,258-269 1k56 d1k56d_ D:38-46,50-54,215-229,230-240 1fof d1fofb_ B:38-47,48-54,215-229,230-240 1e3u d1e3ud_ D:38-46,50-54,215-229,230-240 1k6r d1k6rb_ B:38-47,48-54,215-229,230-240 1k54 d1k54c_ C:38-46,50-54,215-229,230-240 1k54 d1k54d_ D:38-46,50-54,215-229,230-240 1e4d d1e4da_ A:38-46,50-54,215-229,230-240 1k57 d1k57b_ B:38-46,50-54,215-229,230-240 1k55 d1k55c_ C:38-46,50-54,215-229,230-240 1k55 d1k55a_ A:38-46,50-54,215-229,230-240 1k6r d1k6ra_ A:38-46,49-54,215-229,230-240 1e3u d1e3uc_ C:38-46,50-54,215-229,230-240 1k55 d1k55b_ B:38-46,50-54,215-229,230-240 1k55 d1k55d_ D:38-46,50-54,215-229,230-240 1h8z d1h8zb_ B:38-46,50-55,215-229,230-240 1k54 d1k54b_ B:38-46,50-54,215-229,230-240 1ewz d1ewza_ A:38-46,50-54,215-229,230-240 1kgg d1kgga_ A:42-52,53-61,241-253,258-268 1k56 d1k56a_ A:38-46,50-54,215-229,230-240 1h8z d1h8za_ A:38-46,50-54,215-229,230-240 1k56 d1k56c_ C:38-46,50-54,215-229,230-240 1e4d d1e4dd_ D:38-46,50-54,215-229,230-240 1k56 d1k56b_ B:38-46,50-54,215-229,230-240 1e4d d1e4db_ B:38-46,50-54,215-229,230-240 1h5x d1h5xb_ B:38-46,50-55,215-229,230-240 1e3u d1e3ua_ A:38-46,50-54,215-229,230-240 1e3u d1e3ub_ B:38-46,50-54,215-229,230-240 1ewz d1ewzb_ B:38-46,50-54,215-229,230-240 1h5x d1h5xa_ A:38-46,50-54,215-229,230-240 1h8y d1h8ya_ A:38-46,50-54,215-229,230-240 1k6s d1k6sa_ A:38-46,50-54,215-229,230-240 1k54 d1k54a_ A:38-46,50-54,215-229,230-240 1fof d1fofa_ A:38-46,50-54,215-229,230-240 1k4f d1k4fa_ A:38-46,50-54,215-229,230-240 3bls d3blsa_ A:26-35,37-49,321-331,332-342 1e4d d1e4dc_ C:38-46,50-54,215-229,230-240 1fcm d1fcmb_ B:23-32,34-46,318-328,329-339 3bls d3blsb_ B:26-35,37-49,321-331,332-342 1xgj d1xgjb1 B:26-35,37-49,321-331,332-342 1fsw d1fswb_ B:26-35,37-49,321-331,332-342 1mxo d1mxob_ B:26-35,37-49,321-331,332-342 1fco d1fcob_ B:23-32,34-46,318-328,329-339 1l0g d1l0gb_ B:26-35,37-49,321-331,332-342 1fcn d1fcnb_ B:23-32,34-46,318-328,329-339 1c3b d1c3bb_ B:26-35,37-49,321-331,332-342 1xgi d1xgib1 B:26-35,37-49,321-331,332-342 1ome d1omeb_ B:42-52,53-61,244-253,258-267 6. e.62.1 Heme iron utilization protein-like Heme iron utilization protein-like 2 domains; d1 - 3-helical bundle similar to the homeodomain-like fold; d2 - 6-stranded beta-barrel capped by two helices at one end, similar topology to the PH-like fold 1u9t d1u9ta1 A:61-69,70-78,120-129,131-139 2hq2 d2hq2a1 A:61-69,70-78,118-129,131-139 2j0p d2j0pa1 A:62-71,72-80,120-131,133-141 2j0p d2j0pa1 A:242-250,251-259,298-309,311-320 1u9t d1u9ta1 A:239-247,248-256,295-306,308-317 2j0r d2j0ra1 A:241-250,251-259,298-309,311-320 2j0r d2j0ra1 A:63-71,72-80,120-131,133-141 2hq2 d2hq2a1 A:239-247,248-256,295-306,308-317 2hqv d2hqva1 A:83-92,93-101,141-152,154-162 7. d.110.4 SNARE-like beta(2)-alpha-beta(3)-alpha(2) ! Profilin-like core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha 2j3w d2j3wc1 C:3-12,14-23,69-78,80-89 2j3w d2j3wa1 A:3-12,14-23,69-78,80-89 2go5 d2go511 1:2-10,12-20,53-61,62-70 1nrj d1nrja_ A:2-9,11-20,73-81,84-92 1h3q d1h3qa_ A:3-12,14-24,69-78,80-89 2fh5 d2fh5a1 A:2-10,12-20,52-61,62-71 1h8m d1h8ma_ A:2-13,14-24,63-71,75-82 1iou d1ioua_ A:2-13,14-24,63-71,75-82 1ifq d1ifqb_ B:3-11,12-20,58-67,68-77 1ifq d1ifqa_ A:3-11,12-20,58-67,68-77 8. d.205.1 GTP cyclohydrolase I feedback regulatory protein, GFRP GTP cyclohydrolase I feedback regulatory protein, GFRP beta(2)-alpha-beta(2)-alpha-beta(2); 2 layers, alpha/beta, antiparallel beta-sheet: order 342165 1is8 d1is8s_ S:2-10,14-22,65-74,75-83 1is8 d1is8m_ M:2-10,14-22,65-74,75-83 1wpl d1wplp_ P:2-10,14-22,65-74,75-83 1is8 d1is8q_ Q:2-10,14-22,65-74,75-83 1is8 d1is8p_ P:2-10,14-22,65-74,75-83 1wpl d1wplk_ K:2-10,14-22,65-74,75-83 1wpl d1wpls_ S:2-10,14-22,65-74,75-83 1wpl d1wpln_ N:2-10,14-22,65-74,75-83 1is8 d1is8r_ R:2-10,14-22,65-74,75-83 1is8 d1is8l_ L:2-10,14-22,65-74,75-83 1wpl d1wpll_ L:2-10,14-22,65-74,75-83 1is8 d1is8o_ O:2-10,14-22,65-74,75-83 1is8 d1is8n_ N:2-10,14-22,65-74,75-83 1wpl d1wplm_ M:2-10,14-22,65-74,75-83 1is8 d1is8k_ K:2-10,14-22,65-74,75-83 1wpl d1wplt_ T:2-10,14-22,65-74,75-83 1wpl d1wplr_ R:2-10,14-22,65-74,75-83 1wpl d1wplo_ O:2-10,14-22,65-74,75-83 1wpl d1wplq_ Q:2-10,14-22,65-74,75-83 1is7 d1is7q_ Q:2-10,14-22,65-74,75-83 1is8 d1is8t_ T:2-10,14-22,65-74,75-83 1is7 d1is7o_ O:2-10,14-22,65-74,75-83 1is7 d1is7t_ T:2-10,14-22,65-74,75-83 1is7 d1is7k_ K:2-10,14-22,65-74,75-83 1is7 d1is7n_ N:2-10,14-22,65-74,75-83 1is7 d1is7p_ P:2-10,14-22,65-74,75-83 1is7 d1is7l_ L:2-10,14-22,65-74,75-83 1is7 d1is7r_ R:2-10,14-22,65-74,75-83 1is7 d1is7s_ S:2-10,14-22,65-74,75-83 1is7 d1is7m_ M:2-10,14-22,65-74,75-83 1jg5 d1jg5c_ C:1-9,13-21,64-73,74-82 1jg5 d1jg5d_ D:1-9,13-21,64-73,74-82 1jg5 d1jg5a_ A:1-9,13-21,64-73,74-82 1jg5 d1jg5b_ B:1-9,13-21,64-73,74-82 1jg5 d1jg5e_ E:1-9,13-21,64-73,74-82 11. d.110.2 GAF domain-like alpha(2)-beta(3)-alpha-beta(3)-alpha; antiparallel beta-sheet: order 321654 ! Profilin-like core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha 3c2w d3c2wa2 A:353-360,361-367,409-419,420-429 3c2w d3c2wd2 D:353-360,361-367,409-419,420-429 3c2w d3c2wc2 C:353-360,361-367,409-419,420-429 3c2w d3c2we2 E:353-360,361-367,409-419,420-429 3c2w d3c2wf2 F:353-360,361-367,409-419,420-429 3c2w d3c2wh2 H:353-360,361-367,409-419,420-429 3c2w d3c2wg2 G:353-360,361-367,409-419,420-429 3c2w d3c2wb2 B:353-360,361-367,409-419,420-429 3c2w d3c2wf1 F:158-167,169-179,257-267,268-279 3c2w d3c2wc1 C:158-167,169-179,257-267,268-279 2vea d2veaa1 A:171-180,182-192,270-280,281-292 2o9c d2o9ca1 A:171-180,182-192,270-280,281-292 3c2w d3c2wg1 G:158-167,169-179,257-267,268-279 2o9b d2o9ba1 A:171-180,182-192,270-280,281-292 3c2w d3c2we1 E:158-167,169-179,256-267,268-279 3c2w d3c2wb1 B:158-167,169-179,257-267,268-279 3c2w d3c2wa1 A:158-167,169-179,257-267,268-279 1tf1 d1tf1b_ B:30-39,40-50,129-140,142-154 1ztu d1ztua1 A:171-180,182-192,270-280,281-292 3c2w d3c2wd1 D:158-167,169-179,257-267,268-279 1tf1 d1tf1d_ D:30-39,40-50,129-140,142-154 1tf1 d1tf1a_ A:30-39,40-50,129-140,142-154 2ool d2oola1 A:180-189,191-201,279-289,290-301 2ool d2oolb1 B:180-189,191-201,279-289,290-301 2o9a d2o9ac1 C:24-32,37-46,125-136,138-150 1mkm d1mkmb2 B:93-103,104-115,193-204,206-218 1mkm d1mkma2 A:94-103,104-113,193-204,206-218 1stz d1stza2 A:133-139,230-235,285-297,298-309 1tf1 d1tf1c_ C:30-39,40-50,129-140,142-154 1stz d1stzc2 C:133-139,230-235,286-297,298-310 3c2w d3c2wh1 H:158-167,169-179,257-267,268-279 2vea d2veaa2 A:366-373,374-381,424-431,435-442 1vhm d1vhma_ A:60-70,71-80,123-133,134-145 1stz d1stzb2 B:133-139,230-235,286-297,298-310 1vhm d1vhmb_ B:60-70,71-80,123-133,134-145 2o99 d2o99c1 C:24-33,36-46,125-136,138-150 2k2n d2k2na1 A:49-58,60-70,149-159,160-171 2o9a d2o9ad1 D:24-33,36-46,125-136,138-150 1mc0 d1mc0a2 A:421-430,431-439,493-503,505-517 1td5 d1td5b_ B:24-34,35-46,125-136,138-150 2o9a d2o9ab1 B:24-34,35-46,125-136,138-150 2o99 d2o99b1 B:24-34,35-46,125-136,138-150 1f5m d1f5ma_ A:63-73,78-87,130-140,142-153 2o99 d2o99d1 D:24-34,35-46,125-136,138-150 1td5 d1td5a_ A:24-34,35-46,125-136,138-150 1td5 d1td5d_ D:24-34,35-46,125-136,138-150 2o9a d2o9aa1 A:24-34,35-46,125-136,138-150 1mc0 d1mc0a1 A:252-260,264-269,322-332,333-344 2o99 d2o99a1 A:24-34,35-46,125-136,138-150 1td5 d1td5c_ C:24-34,35-46,125-136,138-150 1f5m d1f5mb_ B:63-73,78-87,130-140,142-153 13. d.110.7 Roadblock/LC7 domain alpha-beta(2)-alpha-beta(3)-alpha; structurally most similar to the SNARE-like superfamily with a circular permutation of the terminal helices ! Profilin-like core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha 1veu d1veua_ A:18-27,29-37,77-85,88-96 3cpt d3cpta1 A:18-27,29-37,77-85,88-96 1vet d1veta_ A:18-27,29-37,77-85,88-96 2zl1 d2zl1b1 B:18-27,29-37,78-87,88-97 1sko d1skob_ B:17-26,28-36,77-86,87-96 1vet d1vetb_ B:18-27,29-37,78-87,88-97 1j3w d1j3wb_ B:29-37,39-47,91-100,102-111 1veu d1veub_ B:18-27,29-36,78-87,88-97 1j3w d1j3wc_ C:29-37,39-47,91-100,102-111 2b95 d2b95a1 A:26-35,37-44,85-94,95-103 1j3w d1j3wd_ D:29-37,39-47,91-100,102-111 1j3w d1j3wa_ A:29-37,39-47,91-100,102-111 2e8j d2e8ja1 A:18-25,27-34,75-84,85-93 1szv d1szva1 A:19-27,29-35,79-87,89-96 2e8j d2e8jb1 B:18-25,27-34,75-84,85-93 1z09 d1z09b1 B:112-121,124-130,171-180,181-189 1z09 d1z09a1 A:16-25,28-34,75-84,85-93 2b95 d2b95b1 B:26-35,37-43,85-94,95-103 1sko d1skoa_ A:19-28,30-38,78-86,88-97 2hz5 d2hz5b1 B:16-25,27-33,76-83,86-93 2hz5 d2hz5a1 A:16-25,27-33,75-82,86-94 1y4o d1y4oa1 A:24-33,35-39,83-92,93-101 1y4o d1y4ob1 B:224-233,235-239,284-291,293-301 14. b.114.1 N-utilization substance G protein NusG, insert domain N-utilization substance G protein NusG, insert domain sandwich; 8 strands in 2 sheets; meander 1m1g d1m1gd1 D:50-59,60-68,113-121,122-132 1m1g d1m1ga1 A:50-59,60-68,113-121,122-132 1npp d1nppd1 D:50-59,60-68,113-121,122-132 1npp d1nppb1 B:50-59,60-68,113-121,122-132 1m1g d1m1gc1 C:50-59,60-68,115-121,122-132 1m1g d1m1gb1 B:50-59,60-68,115-121,122-132 1npp d1nppc1 C:50-59,60-68,115-121,122-132 1npp d1nppa1 A:50-59,60-68,115-121,122-132 1m1h d1m1ha1 A:50-59,60-68,115-121,122-132 1npr d1npra1 A:49-59,60-68,115-121,122-134 16. d.110.5 Pheromone-binding domain of LuxR-like quorum-sensing transcription factors alpha(2)-beta(2)-alpha(2)-beta(3)-alpha; possibly related to the PAS domain ! Profilin-like core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha 1h0m d1h0mc2 C:34-44,45-52,111-121,123-133 1h0m d1h0ma2 A:34-44,45-52,111-121,123-133 1l3l d1l3lc2 C:35-44,45-52,111-121,123-133 1l3l d1l3ld2 D:35-44,45-52,111-121,123-133 1h0m d1h0mb2 B:34-44,45-52,111-121,123-133 1l3l d1l3la2 A:34-44,45-52,111-121,123-133 1l3l d1l3lb2 B:34-44,45-52,111-121,123-133 1h0m d1h0md2 D:34-44,45-52,111-121,123-133 18. d.53.1 Ribosomal protein S3 C-terminal domain Ribosomal protein S3 C-terminal domain alpha(2)-beta(4); 2 layers: alpha/beta; antiparallel beta-sheet: order 2143 2hgp d2hgpf2 F:147-156,163-172,181-190,195-204 2vho d2vhoc2 C:147-155,162-170,180-190,193-203 2hgr d2hgrf2 F:146-156,163-171,181-191,194-204 2qal d2qalc2 C:145-155,162-170,180-191,192-203 2avy d2avyc2 C:145-154,163-170,180-191,192-203 2qan d2qanc2 C:145-155,162-170,180-191,192-203 1yl4 d1yl4f2 F:147-156,163-171,181-192,193-204 2i2p d2i2pc2 C:146-155,162-170,181-191,192-203 1vs5 d1vs5c2 C:145-155,162-169,180-191,192-203 1i95 d1i95c2 C:146-156,163-171,181-192,193-204 2hhh d2hhhc2 C:147-156,163-172,181-192,193-204 1hnw d1hnwc2 C:147-156,163-171,181-192,193-204 1i96 d1i96c2 C:146-156,163-171,181-192,193-204 2hgi d2hgif2 F:146-156,163-172,181-192,193-204 2e5l d2e5lc2 C:147-156,163-171,181-192,193-204 2vhp d2vhpc2 C:145-155,162-171,180-191,192-203 1hnz d1hnzc2 C:147-156,163-171,181-192,193-204 2ow8 d2ow8d2 D:147-155,164-171,181-192,193-204 1hnx d1hnxc2 C:147-156,163-172,181-192,193-204 1fjg d1fjgc2 C:147-156,163-172,181-192,193-204 1i94 d1i94c2 C:147-156,163-172,181-192,193-204 1xmq d1xmqc2 C:147-156,163-172,181-192,193-204 2qou d2qouc2 C:146-155,162-170,179-191,192-204 1i97 d1i97c2 C:147-156,163-171,181-192,193-204 2f4v d2f4vc2 C:147-156,163-171,181-192,193-204 1n33 d1n33c2 C:147-156,163-172,181-192,193-204 1j5e d1j5ec2 C:147-156,163-171,181-192,193-204 1xmo d1xmoc2 C:147-156,163-172,181-192,193-204 1xnq d1xnqc2 C:147-156,163-172,181-192,193-204 2z4k d2z4kc2 C:145-155,162-171,179-191,192-205 2qow d2qowc2 C:145-154,163-171,179-191,192-205 1n32 d1n32c2 C:147-156,163-171,181-192,193-204 2z4m d2z4mc2 C:145-155,162-171,179-191,192-205 3df1 d3df1c2 C:145-154,164-171,179-191,192-205 3df3 d3df3c2 C:145-154,164-171,179-191,192-205 2qp0 d2qp0c2 C:146-155,162-170,179-191,192-205 2qoy d2qoyc2 C:146-155,162-170,179-191,192-204 2qbh d2qbhc2 C:145-155,162-170,179-191,192-205 1vs7 d1vs7c2 C:146-155,162-171,179-191,192-204 2qbj d2qbjc2 C:145-155,162-170,179-191,192-205 2qbd d2qbdc2 C:146-155,162-171,179-191,192-205 2qbf d2qbfc2 C:146-155,162-171,179-191,192-205 2uxc d2uxcc2 C:147-156,163-172,180-192,193-206 1n36 d1n36c2 C:147-156,163-171,181-192,193-204 2qbb d2qbbc2 C:146-155,162-170,179-191,192-205 2qb9 d2qb9c2 C:146-155,162-170,179-191,192-205 2uu9 d2uu9c2 C:147-156,163-171,180-192,193-206 2uuc d2uucc2 C:147-156,163-172,180-192,193-206 1xnr d1xnrc2 C:147-156,163-171,180-192,193-206 2uub d2uubc2 C:147-156,163-172,180-192,193-206 2aw7 d2aw7c2 C:146-155,162-170,179-191,192-205 2uua d2uuac2 C:147-156,163-172,180-192,193-206 2i2u d2i2uc2 C:145-155,162-167,178-191,192-206 2b64 d2b64c2 C:147-156,163-171,180-192,193-206 2b9o d2b9oc2 C:147-156,163-171,180-192,193-206 2b9m d2b9mc2 C:147-156,163-171,180-192,193-206 1hr0 d1hr0c2 C:147-156,163-171,179-192,193-207 2j00 d2j00c2 C:147-156,163-171,179-192,193-207 2j02 d2j02c2 C:147-156,163-171,179-192,193-207 1n34 d1n34c2 C:147-156,163-171,179-192,193-207 19. e.52.1 NAD kinase/diacylglycerol kinase-like NAD kinase/diacylglycerol kinase-like 2 domains: d1 [alpha/beta; related to the PFK N-terminal domain (scop_sf 53784)]; d2 [all-beta; atypical beta-sandwich made of 4 structural repeats of beta(3) unit] 1u0r d1u0ra_ A:140-148,149-158,240-246,267-275 1u0r d1u0rd_ D:140-148,149-158,240-246,267-275 1u0r d1u0rb_ B:140-148,149-158,240-246,267-275 1u0r d1u0rc_ C:140-148,149-158,240-247,266-275 1u0t d1u0ta_ A:140-148,149-158,240-246,267-275 1y3i d1y3ia1 A:140-148,149-158,239-246,267-275 1u0t d1u0tb_ B:140-148,149-158,240-246,267-275 1y3i d1y3ib1 B:140-148,149-158,240-246,267-275 2bon d2bona1 A:124-130,132-136,255-260,276-285 2p1r d2p1ra1 A:124-130,132-136,255-261,276-285 2p1r d2p1rb1 B:124-130,132-136,255-261,276-285 2p1r d2p1rd1 D:125-130,132-136,255-261,276-284 2p1r d2p1rc1 C:124-130,132-136,255-261,276-285 2bon d2bonb1 B:124-130,132-136,254-261,276-285 2qvl d2qvla1 A:123-129,130-134,257-262,279-287 2qv7 d2qv7a1 A:123-129,130-134,257-262,279-287 20. d.23.1 Tubby C-terminal domain-like Tubby C-terminal domain-like beta-sheet folds into a barrel (n=12, S=12) around the central helix 1i7e d1i7ea_ A:263-271,282-290,465-473,475-482 1c8z d1c8za_ A:263-271,282-290,465-473,475-482 1zxu d1zxua1 A:37-44,53-59,164-174,186-194 2q4m d2q4ma1 A:37-44,53-59,164-174,186-194 21. d.110.1 Profilin (actin-binding protein) alpha-beta(2)-alpha-beta(5)-alpha ! Profilin-like core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha 1hlu d1hlup_ P:15-25,27-34,97-106,107-115 1pne d1pnea_ A:15-25,27-34,97-106,107-115 1cf0 d1cf0a_ A:15-25,27-34,98-106,107-115 1awi d1awia_ A:15-25,27-34,98-106,107-115 1fil d1fila_ A:15-25,27-34,97-106,107-115 1fik d1fika_ A:15-25,27-34,97-106,107-115 1cjf d1cjfb_ B:15-25,27-34,97-106,107-115 2pav d2pavp1 P:15-25,27-34,97-106,107-115 2btf d2btfp_ P:15-25,27-34,97-106,107-115 1cf0 d1cf0b_ B:15-25,27-34,97-106,107-115 1d1j d1d1jb_ B:15-25,27-34,97-106,107-115 3chw d3chwp1 P:15-25,27-34,97-106,107-115 1awi d1awib_ B:15-25,27-34,97-106,107-115 2pbd d2pbdp1 P:15-25,27-34,97-106,107-115 1ypr d1yprb_ B:15-23,27-33,83-92,93-102 1k0k d1k0ka_ A:15-23,27-33,83-92,93-102 1ypr d1ypra_ A:15-23,27-33,83-92,93-102 1d1j d1d1ja_ A:15-25,27-34,97-106,107-115 1f2k d1f2kb_ B:2017-2024,2026-2032,2083-2092,2093-2102 1f2k d1f2ka_ A:1017-1024,1026-1032,1083-1092,1093-1102 1cqa d1cqaa_ A:23-30,32-38,91-100,101-110 2acg d2acga_ A:16-24,26-32,83-92,93-102 1prq d1prqa_ A:17-24,26-32,83-92,93-102 1acf d1acfa_ A:16-24,26-32,83-92,93-102 1g5u d1g5ua_ A:1021-1028,1030-1036,1089-1098,1099-1108 1g5u d1g5ub_ B:2021-2028,2030-2036,2089-2098,2099-2108 1cjf d1cjfa_ A:15-25,27-34,94-106,107-115 3nul d3nula_ A:20-28,30-36,89-98,99-108 1a0k d1a0ka_ A:20-28,30-36,89-98,99-108 1d1j d1d1jd_ D:15-25,27-34,94-106,107-115 1d1j d1d1jc_ C:15-25,27-34,94-106,107-115 1pfl d1pfla_ A:17-25,27-34,94-106,107-115 2prf d2prfa_ A:17-22,28-33,83-92,93-102 22. c.119.1 DAK1/DegV-like domain folds and architecture show some similarity to the tubulin-like GTPases; the nucleotide-binding sites of the Dihydroxyacetone kinase and tubulin families are different ! DAK1/DegV-like 2 different domains; d1: [core: 3 layers, a/b/a; parallel sheet of 5 strands, order: 2134]; D2: [2 layers, a/b; mixed sheet of 6 strands, order 321645; strands 2 and 6 are antiparallel to the rest] 1pzx d1pzxb_ B:157-164,188-196,230-237,274-281 1pzx d1pzxa_ A:157-164,188-196,230-236,274-281 1mgp d1mgpa_ A:182-190,213-222,251-263,300-309 1vpv d1vpvb_ B:157-165,188-197,226-238,275-287 1vpv d1vpva_ A:157-165,188-197,226-238,275-287 1un9 d1un9b4 B:186-196,211-216,253-262,301-310 1un9 d1un9a4 A:186-196,211-216,253-262,301-310 1un8 d1un8a4 A:186-196,211-216,253-262,301-310 1un8 d1un8b4 B:186-196,211-216,253-262,301-310 23. b.22.1 TNF-like TNF-like sandwich, 10 strands in 2 sheets; jelly-roll 1osg d1osgc_ C:144-152,167-175,192-203,277-284 1kxg d1kxga_ A:144-152,167-175,192-203,277-284 1osg d1osge_ E:144-152,167-175,192-203,277-284 1kxg d1kxgf_ F:144-152,167-175,192-203,277-284 1oqd d1oqdd_ D:3-11,26-34,51-62,136-143 1oqd d1oqdc_ C:3-11,26-34,51-62,136-143 1oqd d1oqdf_ F:3-11,26-34,51-62,136-143 1oqd d1oqdg_ G:3-11,26-34,51-62,136-143 1oqd d1oqda_ A:3-11,26-34,51-62,136-143 1kxg d1kxgc_ C:144-152,167-175,192-203,277-284 1oqd d1oqdb_ B:3-11,26-34,51-62,136-143 1oqd d1oqdj_ J:3-11,26-34,51-62,136-143 1oqd d1oqde_ E:3-11,26-34,51-62,136-143 1oqd d1oqdh_ H:3-11,26-34,51-62,136-143 1oqd d1oqdi_ I:3-11,26-34,51-62,136-143 1jh5 d1jh5i_ I:3-11,26-34,51-62,136-143 1jh5 d1jh5e_ E:3-11,26-34,51-62,136-143 1oqe d1oqed_ D:3-11,26-34,51-62,136-143 1jh5 d1jh5g_ G:3-11,26-34,51-62,136-143 1jh5 d1jh5a_ A:3-11,26-34,51-62,136-143 1jh5 d1jh5j_ J:3-11,26-34,51-62,136-143 1jh5 d1jh5h_ H:3-11,26-34,51-62,136-143 1jh5 d1jh5b_ B:3-11,26-34,51-62,136-143 1jh5 d1jh5f_ F:3-11,26-34,51-62,136-143 1jh5 d1jh5d_ D:3-11,26-34,51-62,136-143 1jh5 d1jh5c_ C:3-11,26-34,51-62,136-143 1osg d1osga_ A:144-152,167-175,192-203,277-284 1kxg d1kxge_ E:144-152,167-175,192-203,277-284 1oqe d1oqef_ F:3-11,26-34,51-62,136-143 1oqe d1oqeh_ H:3-11,26-34,51-62,136-143 1osg d1osgb_ B:144-152,167-175,192-203,277-284 1oqe d1oqeb_ B:3-11,26-34,51-62,136-143 1oqe d1oqei_ I:3-11,26-34,51-62,136-143 1oqe d1oqea_ A:3-11,26-34,51-62,136-143 1oqe d1oqej_ J:3-11,26-34,51-62,136-143 1kxg d1kxgd_ D:144-152,167-175,192-203,277-284 1oqe d1oqeg_ G:3-11,26-34,51-62,136-143 1oqe d1oqec_ C:3-11,26-34,51-62,136-143 1oqe d1oqee_ E:3-11,26-34,51-62,136-143 1kxg d1kxgb_ B:144-152,167-175,192-203,277-284 1osg d1osgd_ D:144-152,167-175,192-203,277-284 1osg d1osgf_ F:144-152,167-175,192-203,277-284 2q1m d2q1ma1 A:58-65,68-73,94-102,161-171 3b94 d3b94d1 D:58-65,68-73,94-102,161-172 1u5y d1u5yd_ D:106-117,126-136,153-164,234-241 2r30 d2r30a1 A:58-65,68-73,94-102,161-171 3b94 d3b94a1 A:58-64,68-73,94-101,163-172 1kd7 d1kd7m_ M:145-152,167-175,192-203,277-284 1kd7 d1kd7c_ C:145-152,167-175,192-203,277-284 1kd7 d1kd7l_ L:145-152,167-175,192-203,277-284 1kd7 d1kd7a_ A:145-152,167-175,192-203,277-284 1kd7 d1kd7k_ K:145-152,167-175,192-203,277-284 1kd7 d1kd7b_ B:145-152,167-175,192-203,277-284 3b93 d3b93c1 C:58-64,68-73,94-101,163-172 2r32 d2r32a1 A:58-64,68-72,94-102,161-172 3b93 d3b93a1 A:58-65,68-73,94-103,161-172 2q8o d2q8oa1 A:52-59,60-66,88-98,159-166 2qdn d2qdna1 A:52-59,60-66,88-98,159-166 3b9i d3b9ia1 A:52-59,60-66,88-98,159-166 2q8o d2q8ob1 B:52-59,60-66,88-98,159-166 2qdn d2qdnb1 B:52-59,60-66,88-98,159-166 3b9i d3b9ib1 B:52-59,60-66,88-98,159-166 1d0g d1d0gd_ D:122-127,162-166,181-194,273-280 1d0g d1d0gb_ B:122-127,162-166,181-194,273-280 1d0g d1d0ga_ A:122-127,162-166,181-194,273-280 1d2q d1d2qa_ A:122-129,162-166,181-191,273-280 1du3 d1du3j_ J:122-129,161-166,181-194,273-280 1d4v d1d4vb_ B:122-129,161-166,181-194,273-280 3b94 d3b94c1 C:58-64,68-73,94-100,164-172 1du3 d1du3d_ D:122-129,161-166,181-194,273-280 2tnf d2tnfb_ B:12-19,35-39,55-68,149-157 2tun d2tune_ E:12-19,35-39,55-66,150-157 2hev d2hevf1 F:60-70,74-79,97-110,164-176 2az5 d2az5b1 B:12-19,35-39,55-68,149-157 1a8m d1a8ma_ A:12-19,35-39,52-66,149-157 1o91 d1o91a_ A:615-622,635-642,656-669,732-743 2az5 d2az5d1 D:12-19,35-39,55-68,149-157 5tsw d5tswa_ A:12-19,35-39,55-68,149-157 1du3 d1du3l_ L:122-129,161-166,181-194,273-280 1du3 d1du3f_ F:122-129,161-166,181-194,273-280 3b94 d3b94b1 B:58-64,68-73,94-103,162-172 2tun d2tunb_ B:12-19,35-39,54-68,149-157 2hew d2hewf1 F:61-72,73-79,101-111,167-180 1tnr d1tnra_ A:29-36,52-56,72-84,164-171 1rj8 d1rj8g_ G:248-255,274-280,300-314,378-387 1rj8 d1rj8b_ B:248-255,274-280,300-314,378-387 1o91 d1o91b_ B:615-622,635-642,656-669,732-743 2tnf d2tnfa_ A:12-19,35-39,55-68,150-157 3b93 d3b93b1 B:58-64,68-72,94-103,162-172 4tsv d4tsva_ A:12-19,35-39,55-68,150-157 1c28 d1c28c_ C:116-122,136-141,157-168,235-245 1a8m d1a8mc_ C:12-19,35-39,55-68,150-157 1pk6 d1pk6b_ B:95-101,116-123,140-150,212-223 2jg9 d2jg9a1 A:93-99,112-119,136-147,212-222 2jg9 d2jg9d1 D:93-99,112-119,136-147,212-222 2jg8 d2jg8a1 A:93-99,112-119,136-147,212-222 2jg8 d2jg8d1 D:93-99,112-119,136-147,212-222 2tun d2tund_ D:12-19,35-39,55-68,150-157 1rj8 d1rj8d_ D:248-255,274-280,300-315,378-387 2tnf d2tnfc_ C:12-19,35-39,55-68,150-157 2tun d2tunc_ C:12-19,35-39,55-67,150-157 1pk6 d1pk6a_ A:93-99,112-119,136-147,212-222 2jg9 d2jg9b1 B:95-101,116-123,140-150,212-223 2jg9 d2jg9c1 C:92-98,113-118,134-147,206-217 2jg9 d2jg9f1 F:92-98,113-118,134-147,206-217 2jg9 d2jg9e1 E:95-101,116-123,140-150,212-223 1tnf d1tnfb_ B:12-19,35-39,55-68,150-157 2jg8 d2jg8b1 B:95-101,116-123,140-150,212-223 1rj7 d1rj7m_ M:248-255,274-280,300-313,378-387 2jg8 d2jg8e1 E:95-101,116-123,140-150,212-223 1tnf d1tnfc_ C:12-19,35-39,55-68,150-157 1o91 d1o91c_ C:615-622,637-642,656-669,732-743 1rj8 d1rj8a_ A:248-256,273-280,300-315,378-387 1c3h d1c3he_ E:116-122,136-141,157-170,235-245 1c3h d1c3ha_ A:116-124,136-141,157-171,233-245 1c3h d1c3hd_ D:116-122,136-141,157-170,235-245 1gr3 d1gr3a_ A:552-558,572-577,593-606,670-680 1du3 d1du3e_ E:122-129,161-166,181-194,273-281 1rj8 d1rj8f_ F:248-256,273-280,300-315,378-387 2jg8 d2jg8f1 F:92-98,113-118,134-147,206-217 1xu2 d1xu2d_ D:107-119,123-136,153-164,234-241 1rj7 d1rj7h_ H:248-256,273-280,300-313,378-387 1rj7 d1rj7k_ K:248-256,273-280,300-313,378-387 1c3h d1c3hf_ F:116-122,136-141,157-170,235-245 1du3 d1du3k_ K:122-129,161-166,181-194,273-281 1rj8 d1rj8e_ E:248-256,273-280,300-315,378-387 1rj7 d1rj7f_ F:248-256,273-280,300-313,378-387 1c28 d1c28a_ A:116-123,136-141,157-170,233-245 1rj7 d1rj7d_ D:248-256,273-280,300-313,378-387 1rj7 d1rj7g_ G:248-256,273-280,300-313,378-387 2jg8 d2jg8c1 C:92-98,113-118,134-147,206-217 1rj7 d1rj7i_ I:248-256,273-280,300-313,378-387 1rj7 d1rj7b_ B:248-256,273-280,300-313,378-387 1c3h d1c3hc_ C:116-124,136-141,160-171,233-245 1tnf d1tnfa_ A:12-19,35-39,52-68,150-157 1dg6 d1dg6a_ A:122-129,162-166,181-194,273-281 1rj7 d1rj7l_ L:248-256,273-280,300-313,378-387 1rj7 d1rj7a_ A:248-256,273-280,300-313,378-387 1c3h d1c3hb_ B:116-124,136-141,160-171,233-245 1rj7 d1rj7e_ E:248-256,273-280,300-313,378-387 1c28 d1c28b_ B:116-122,136-141,157-173,235-245 2tun d2tuna_ A:12-19,35-39,54-68,149-157 1u5y d1u5ya_ A:107-118,123-136,153-164,234-241 1xu2 d1xu2a_ A:107-118,123-136,153-164,234-241 1u5x d1u5xa_ A:107-118,123-136,153-164,234-241 1u5y d1u5yb_ B:107-118,123-136,153-163,234-241 1u5z d1u5za_ A:107-118,123-136,153-164,234-241 1jtz d1jtzy_ Y:163-170,193-197,212-224,304-314 1pk6 d1pk6c_ C:92-98,113-118,137-147,206-217 1s55 d1s55b1 B:163-170,193-197,212-225,304-314 1s55 d1s55a1 A:163-170,193-197,212-225,304-314 1jtz d1jtzx_ X:163-170,193-197,212-225,304-314 1iqa d1iqaa_ A:163-170,193-197,212-225,304-314 1s55 d1s55c1 C:163-170,193-197,212-225,304-314 1iqa d1iqab_ B:163-170,193-197,212-225,304-314 1iqa d1iqac_ C:163-170,193-197,212-225,304-314 1jtz d1jtzz_ Z:163-170,193-197,212-225,304-314 1xu2 d1xu2b_ B:106-118,123-136,153-164,234-241 1xu1 d1xu1b_ B:106-118,123-136,153-164,234-241 1xu1 d1xu1a_ A:106-118,123-136,153-164,234-241 1xu1 d1xu1d_ D:106-118,123-136,153-164,234-241 2hey d2heyg1 G:61-67,73-80,101-110,168-180 2hey d2heyf1 F:61-67,73-80,101-110,168-180 24. d.77.1 RL5-like RL5-like beta-alpha-beta(2)-alpha-beta(3)-alpha; 2 layers, alpha/beta; antiparallel beta-sheet: order 231654 2pzz d2pzza1 A:2-12,40-49,78-85,103-110 2nwu d2nwua1 A:2-11,40-48,80-86,110-116 1vs8 d1vs8f1 F:28-40,84-91,125-132,150-159 1vq7 d1vq7d1 D:16-27,68-76,102-107,128-136 2nwu d2nwub1 B:2-12,39-49,80-86,110-116 1mji d1mjib_ B:32-44,88-95,129-136,151-163 2otj d2otjd1 D:16-27,69-76,102-107,128-136 1yij d1yijd1 D:16-27,69-76,102-107,128-136 1vq4 d1vq4d1 D:16-27,69-76,102-107,128-136 1vq5 d1vq5d1 D:16-27,69-76,102-107,128-136 1q81 d1q81f_ F:16-28,67-76,102-107,128-136 1q86 d1q86f_ F:16-28,67-76,102-107,128-136 1yit d1yitd1 D:16-27,69-76,102-107,128-136 1vqp d1vqpd1 D:16-28,69-76,102-107,128-136 1q7y d1q7yf_ F:16-28,67-76,102-107,128-136 1vq8 d1vq8d1 D:16-27,69-76,102-107,128-136 2ogk d2ogkc1 C:4-16,51-59,94-101,118-127 1vqo d1vqod1 D:16-27,69-76,102-107,128-136 1mji d1mjia_ A:32-43,86-95,129-136,154-163 1vqk d1vqkd1 D:16-27,69-76,102-107,128-136 2nrq d2nrqa1 A:4-14,48-60,93-100,118-125 1iq4 d1iq4b_ B:29-40,82-92,126-134,150-160 2ogk d2ogka1 A:4-16,51-59,94-101,118-127 1qvg d1qvgd_ D:16-27,67-76,102-107,128-136 2j03 d2j03g1 G:32-42,88-95,130-137,153-163 1kqs d1kqsd_ D:16-27,67-76,102-107,128-136 1q82 d1q82f_ F:16-27,67-76,102-107,128-136 1m90 d1m90f_ F:16-27,67-76,102-107,128-136 1kc8 d1kc8f_ F:16-27,67-76,102-107,128-136 1kd1 d1kd1f_ F:16-27,67-76,102-107,128-136 1n8r d1n8rf_ F:16-27,67-76,102-107,128-136 1k73 d1k73f_ F:16-27,67-76,102-107,128-136 1m1k d1m1kf_ F:16-27,67-76,102-107,128-136 1k9m d1k9mf_ F:16-27,67-76,102-107,128-136 1k8a d1k8af_ F:16-27,67-76,102-107,128-136 1qvf d1qvfd_ D:16-27,67-76,102-107,128-136 1nji d1njif_ F:16-27,67-76,102-107,128-136 1jj2 d1jj2d_ D:16-27,67-76,102-107,128-136 2qbc d2qbcf1 F:28-40,82-91,125-131,151-159 2qba d2qbaf1 F:28-40,82-91,125-131,151-159 2hgj d2hgjg1 G:32-42,90-96,128-132,154-163 2ogk d2ogkb1 B:5-16,48-59,94-101,118-126 3dll d3dlld1 D:29-38,84-92,126-135,150-160 2j01 d2j01g1 G:32-42,87-96,129-137,155-163 2hgu d2hgug1 G:32-42,90-95,128-132,153-163 1iq4 d1iq4a_ A:29-40,81-92,126-134,150-160 1yjn d1yjnd1 D:16-28,65-76,102-107,128-136 1yj9 d1yj9d1 D:16-28,65-76,102-107,128-136 2qoz d2qozf1 F:28-37,82-91,125-132,150-159 2qp1 d2qp1f1 F:28-37,82-91,125-132,150-159 2otl d2otld1 D:16-27,65-76,102-107,128-136 1yi2 d1yi2d1 D:16-27,65-76,102-107,128-136 1s72 d1s72d_ D:16-27,65-76,102-107,128-136 1yjw d1yjwd1 D:16-27,65-76,102-107,128-136 2ogk d2ogkd1 D:4-16,48-59,94-101,118-127 1vq6 d1vq6d1 D:16-27,65-76,102-107,128-136 2zjq d2zjqd1 D:29-38,82-92,126-135,150-160 1vq9 d1vq9d1 D:16-27,65-76,102-107,128-136 1yhq d1yhqd1 D:16-27,65-76,102-107,128-136 1vqm d1vqmd1 D:16-27,65-76,102-107,128-136 1vql d1vqld1 D:16-27,65-76,102-107,128-136 1vqn d1vqnd1 D:16-27,65-76,102-107,128-136 2zjr d2zjrd1 D:29-38,82-92,127-135,150-160 3df4 d3df4f1 F:28-40,80-88,125-132,150-159 3cf5 d3cf5d1 D:29-38,81-92,127-135,150-160 2qox d2qoxf1 F:28-37,82-91,126-132,150-158 2zjp d2zjpd1 D:29-38,81-92,126-135,150-160 2j28 d2j28f1 F:28-39,79-91,125-133,149-159 2awb d2awbf1 F:28-39,79-91,125-133,149-159 2vhn d2vhnf1 F:28-39,78-88,125-133,149-159 2vhm d2vhmf1 F:28-39,78-88,125-133,149-159 3bbx d3bbxf1 F:28-38,79-91,126-131,151-159 2aw4 d2aw4f1 F:28-38,79-91,126-131,151-159 2rdo d2rdof1 F:28-38,79-91,126-131,151-159 1vs6 d1vs6f1 F:28-38,78-91,126-131,151-158 25. b.7.1 C2 domain (Calcium/lipid-binding domain, CaLB) two constituent families are related by circular permutation ! C2 domain-like sandwich; 8 strands in 2 sheets; greek-key 1e8y d1e8ya2 A:360-370,406-417,478-484,514-521 1e8x d1e8xa2 A:360-370,406-417,478-484,514-521 1e8z d1e8za2 A:360-370,406-417,478-484,514-521 1e7u d1e7ua2 A:360-370,406-417,478-484,514-521 1d5r d1d5ra1 A:192-202,237-243,315-322,341-350 1he8 d1he8a2 A:360-370,406-417,478-484,514-521 1e90 d1e90a2 A:360-370,406-417,478-484,514-521 1e7v d1e7va2 A:360-370,406-417,478-484,514-521 1e8w d1e8wa2 A:360-370,406-417,478-484,514-521 1gmi d1gmia_ A:7-18,61-75,111-121,122-132 1bci d1bcia_ A:17-29,67-80,116-124,128-138 2cjt d2cjtc1 C:2-14,41-53,94-98,118-128 2cjs d2cjsa1 A:2-14,41-53,94-98,118-128 2cjt d2cjtd1 D:2-14,41-53,94-98,118-128 1rlw d1rlwa_ A:16-29,67-81,115-125,127-138 1cjy d1cjya1 A:17-29,67-80,115-125,127-139 2isd d2isda2 A:627-640,679-694,729-735,746-756 2nq3 d2nq3a1 A:17-30,61-74,115-125,130-141 1bdy d1bdya_ A:2-15,58-63,100-109,111-123 1qat d1qatb2 B:627-640,680-694,729-735,746-756 1djz d1djza2 A:627-640,680-694,729-735,746-756 1qas d1qasa2 A:627-640,680-694,729-735,746-756 1djx d1djxa2 A:627-640,680-694,729-735,746-756 1djg d1djga2 A:627-640,680-694,729-735,746-756 1qat d1qata2 A:627-640,680-694,729-735,746-756 1qas d1qasb2 B:627-640,680-694,729-735,746-756 1djy d1djya2 A:627-640,680-694,729-735,746-756 1djg d1djgb2 B:627-640,680-694,729-735,746-756 1djh d1djha2 A:627-640,680-694,729-735,746-756 1djz d1djzb2 B:627-640,680-694,729-735,746-756 1djx d1djxb2 B:627-640,680-694,729-735,746-756 2cjt d2cjta1 A:1-14,41-54,94-99,118-128 1dji d1djia2 A:627-640,680-694,729-735,746-756 1djw d1djwa2 A:627-640,680-694,729-735,746-756 1djh d1djhb2 B:627-640,680-694,729-735,746-756 2isd d2isdb2 B:627-640,680-694,729-735,746-756 1djw d1djwb2 B:627-640,680-694,729-735,746-756 2cjt d2cjtb1 B:1-14,41-54,94-99,118-128 1dji d1djib2 B:627-640,680-694,729-735,746-756 1djy d1djyb2 B:627-640,680-694,729-735,746-756 1bdy d1bdyb_ B:2-15,58-63,100-109,111-123 2ep6 d2ep6a1 A:96-108,142-152,190-194,206-217 1cjy d1cjyb1 B:1016-1029,1067-1080,1115-1125,1127-1140 2cjs d2cjsb1 B:1-14,41-54,94-98,118-129 2fju d2fjub2 B:678-689,725-729,772-778,789-799 2zkm d2zkmx2 X:676-689,725-729,772-778,789-799 1wfj d1wfja_ A:8-21,54-68,103-115,120-130 2yrb d2yrba1 A:603-617,656-664,707-719,726-739 26. d.110.9 GlcG-like alpha-beta(2)-alpha(3)-beta(2)-alpha; similar to the Roadblock/LC7 domain ! Profilin-like core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha 2a2l d2a2lc1 C:36-43,45-53,107-114,115-125 2a2l d2a2la1 A:36-43,45-53,107-114,115-125 2a2l d2a2ld1 D:36-43,45-53,107-114,115-125 2a2l d2a2lb1 B:36-43,45-53,107-114,115-125 27. b.115.1 Calcium-mediated lectin Calcium-mediated lectin sandwich; 9 strands in 2 sheets; greek-key 1oxc d1oxcd_ D:10-21,46-60,86-96,104-112 1ovs d1ovsc_ C:10-21,46-60,86-96,104-112 1oxc d1oxcc_ C:10-21,46-60,86-96,104-112 2chh d2chha1 A:10-21,47-59,85-95,103-111 1oux d1ouxd_ D:10-21,46-60,86-96,104-111 1w8f d1w8fc1 C:10-21,46-60,86-96,104-112 1uqx d1uqxa_ A:10-21,47-59,85-95,103-111 1ovs d1ovsa_ A:10-21,46-60,86-96,104-111 1w8h d1w8hd1 D:10-21,46-60,86-96,104-111 1oxc d1oxca_ A:10-21,46-60,86-96,104-111 1w8f d1w8fd1 D:10-21,47-60,86-96,104-112 1oux d1ouxc_ C:10-21,46-59,86-96,104-112 2boj d2boja1 A:10-21,47-60,86-96,104-111 2boj d2bojd1 D:10-21,46-59,86-96,104-112 1uzv d1uzvb_ B:10-21,47-60,86-96,104-112 1w8f d1w8fb1 B:10-21,46-59,86-96,104-112 2bp6 d2bp6d1 D:10-21,46-59,86-96,104-111 1ous d1ousd_ D:10-21,47-60,86-96,104-112 2bp6 d2bp6c1 C:10-21,47-60,86-96,104-112 2jdh d2jdhd1 D:10-21,46-59,86-96,104-112 2jdk d2jdkd1 D:10-21,46-59,86-96,104-112 2jdk d2jdkb1 B:10-21,46-59,86-96,104-112 1ovp d1ovpa_ A:10-21,47-60,86-96,104-112 1ous d1ousa_ A:10-21,47-60,86-96,104-112 1uzv d1uzva_ A:10-21,47-60,86-96,104-112 1gzt d1gzta_ A:10-21,47-60,86-96,104-112 2bp6 d2bp6a1 A:10-21,47-60,86-96,104-112 2jdh d2jdha1 A:10-21,47-60,86-96,104-112 2jdk d2jdka1 A:10-21,47-60,86-96,104-112 1ovs d1ovsb_ B:10-21,47-60,86-96,104-111 2boj d2bojc1 C:10-21,47-60,86-96,104-112 1ovs d1ovsd_ D:10-21,47-60,86-96,104-111 1w8h d1w8hb1 B:10-21,47-60,86-96,104-111 2bp6 d2bp6b1 B:10-21,47-60,86-96,104-111 1gzt d1gztc_ C:10-21,47-60,86-96,104-111 1uzv d1uzvc_ C:10-21,47-60,86-96,104-111 2jdh d2jdhc1 C:10-21,47-60,86-96,104-111 1ous d1ousb_ B:10-21,47-59,86-96,104-111 2jdk d2jdkc1 C:10-21,47-60,86-96,104-111 1uzv d1uzvd_ D:10-21,47-59,86-96,104-112 2boj d2bojb1 B:10-21,47-59,86-96,104-112 1ous d1ousc_ C:10-21,47-59,86-96,104-112 1gzt d1gztd_ D:10-21,47-59,86-96,104-112 2jdh d2jdhb1 B:10-21,47-59,86-96,104-112 1w8f d1w8fa1 A:10-21,47-59,86-96,104-112 1our d1oura_ A:10-21,47-59,86-96,104-112 1oxc d1oxcb_ B:10-21,47-59,86-96,104-111 1oux d1ouxb_ B:10-21,47-59,86-96,104-111 1oux d1ouxa_ A:10-21,47-60,86-96,104-111 1gzt d1gztb_ B:10-21,47-59,86-96,104-111 1w8h d1w8ha1 A:10-21,47-59,86-96,104-111 1w8h d1w8hc1 C:10-21,47-59,86-96,104-111 28. d.110.10 YNR034W-A-like Profilin-like core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha 2grg d2grga1 A:14-22,24-31,64-73,74-82 29. b.26.1 SMAD/FHA domain has a few short helices inserted in loops ! SMAD/FHA domain sandwich; 11 strands in 2 sheets; greek-key 1wv3 d1wv3a1 A:1-9,10-17,61-68,69-79 1mr1 d1mr1b_ B:321-331,338-343,499-506,522-529 1mr1 d1mr1a_ A:321-331,338-343,499-506,522-529 1uht d1uhta_ A:11-19,23-31,96-102,104-113 2aff d2affa1 A:4-12,14-22,85-91,92-100 1dd1 d1dd1b_ B:321-331,338-343,499-506,522-529 1dd1 d1dd1a_ A:321-331,338-343,499-506,522-529 1dd1 d1dd1c_ C:321-331,338-343,499-506,522-529 2fez d2feza3 A:289-296,297-303,365-372,373-381 1ygs d1ygsa_ A:321-331,338-343,499-505,522-529 1r21 d1r21a_ A:4-11,15-22,84-91,92-100 1g88 d1g88a_ A:321-331,338-343,500-506,522-529 1u7f d1u7fb_ B:321-331,338-343,499-506,522-529 1g88 d1g88b_ B:321-331,338-343,500-506,522-529 1u7v d1u7vb_ B:321-331,338-343,499-506,522-529 1g88 d1g88c_ C:321-331,338-343,500-506,522-529 1j2f d1j2fb_ B:203-211,212-221,343-350,362-369 1j2f d1j2fa_ A:203-211,213-221,343-351,362-369 1qwt d1qwta_ A:203-211,212-221,343-350,362-369 1mjs d1mjsa_ A:230-239,246-250,369-376,392-399 1fhr d1fhra_ A:575-584,588-596,674-685,686-697 2ff4 d2ff4a3 A:290-296,297-303,365-372,373-380 2ff4 d2ff4b3 B:290-296,297-303,365-372,373-380 1khx d1khxa_ A:273-282,289-293,413-419,435-442 1u7v d1u7va_ A:273-282,289-293,413-419,435-442 1fhq d1fhqa_ A:575-583,589-596,674-685,686-697 1u7f d1u7fa_ A:231-240,247-251,371-377,393-400 1dev d1deva_ A:273-282,289-293,413-419,435-442 1g6g d1g6gb_ B:33-40,45-49,127-133,140-148 1g6g d1g6ga_ A:30-40,44-51,126-133,140-148 1j4k d1j4ka_ A:575-583,589-596,674-685,686-697 1khu d1khub_ B:270-279,286-290,411-417,433-440 1mk2 d1mk2a_ A:230-239,246-250,370-376,392-399 1dmz d1dmza_ A:575-583,589-596,675-685,686-697 1k2m d1k2ma_ A:575-583,589-596,674-685,686-697 1k2n d1k2na_ A:575-583,589-596,674-685,686-697 1k3q d1k3qa_ A:31-39,44-50,126-133,140-148 1j4l d1j4la_ A:575-583,589-596,674-685,686-697 1qwt d1qwtb_ B:203-211,213-221,343-351,362-370 1mzk d1mzka_ A:179-189,194-201,277-284,287-296 1k3j d1k3ja_ A:31-39,45-50,126-133,140-148 2g1l d2g1la1 A:499-504,514-518,583-590,592-599 2jqi d2jqia1 A:31-39,45-50,126-133,140-148 1j4p d1j4pa_ A:31-39,45-50,126-133,140-148 1dev d1devc_ C:273-282,289-293,413-418,433-442 1j4o d1j4oa_ A:31-39,45-50,126-133,140-148 1j4q d1j4qa_ A:31-39,45-50,126-133,140-148 1qu5 d1qu5a_ A:575-583,589-596,674-685,686-697 1gxc d1gxcd_ D:93-99,104-109,185-192,196-204 1gxc d1gxca_ A:93-99,104-109,185-192,196-204 1gxc d1gxcg_ G:93-99,104-108,185-192,196-204 1gxc d1gxcj_ J:93-99,104-108,185-192,196-204 1wln d1wlna1 A:10-17,29-34,97-104,107-115 1g3g d1g3ga_ A:31-39,44-50,126-133,140-147 2a0t d2a0ta1 A:31-39,45-50,126-133,140-147 2csw d2cswa1 A:16-23,28-33,104-109,120-128 1k3n d1k3na_ A:31-39,45-50,126-133,140-147 2pie d2piea1 A:16-23,28-32,102-109,120-128 30. d.124.1 Ribonuclease Rh-like Ribonuclease Rh-like alpha+beta fold 1jy5 d1jy5b_ B:6-14,40-50,166-172,173-184 1jy5 d1jy5a_ A:6-14,40-50,166-172,173-184 1sgl d1sgla_ A:6-14,40-48,166-172,174-185 1ioo d1iooa_ A:3-11,29-38,149-155,161-172 1ioo d1ioob_ B:3-11,29-38,149-155,161-172 1iqq d1iqqa_ A:2-10,30-39,151-159,160-173 1bol d1bola_ A:25-33,43-53,178-184,185-198 1dix d1dixa_ A:5-13,36-46,157-165,167-180 1iyb d1iyba_ A:5-13,36-46,156-164,166-179 1iyb d1iybb_ B:5-13,36-46,156-164,166-179 1ucd d1ucda_ A:2-10,31-41,147-156,157-171 1j1f d1j1fa_ A:2-10,31-41,147-156,157-171 1j1g d1j1ga_ A:2-10,31-41,147-156,157-171 1ucc d1ucca_ A:2-10,31-41,147-156,157-171 1ucg d1ucgb_ B:2-10,31-41,147-156,157-171 1bk7 d1bk7a_ A:2-10,31-41,147-156,157-171 1uca d1ucaa_ A:2-10,31-41,147-156,157-171 1ucg d1ucga_ A:2-10,31-41,147-156,157-171 1v9h d1v9ha_ A:2-10,31-41,147-156,157-171 33. d.110.3 PYP-like sensor domain (PAS domain) alpha-beta(2)-alpha(2)-beta(3) ! Profilin-like core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha 3c2w d3c2wc3 C:27-34,36-43,92-103,104-113 3c2w d3c2wg3 G:27-34,36-43,92-103,104-113 3c2w d3c2wh3 H:27-34,36-43,92-103,104-113 3c2w d3c2wf3 F:27-34,36-43,92-103,104-113 3c2w d3c2wa3 A:27-34,36-42,92-103,104-113 1ll8 d1ll8a_ A:10-17,18-25,89-100,101-112 3c2w d3c2we3 E:27-34,36-42,92-103,104-113 1ztu d1ztua2 A:39-47,48-56,109-119,120-129 3c2w d3c2wd3 D:27-34,36-42,92-103,104-113 1v9z d1v9za_ A:31-38,40-46,110-121,122-132 3c2w d3c2wb3 B:27-34,37-42,92-103,104-113 1s67 d1s67u_ U:31-38,40-46,110-121,122-133 1s67 d1s67l_ L:31-38,40-46,110-121,122-133 1v9z d1v9zb_ B:31-38,40-46,110-121,122-132 1s66 d1s66l_ L:31-38,40-46,110-121,122-133 1vb6 d1vb6b1 B:31-38,40-46,110-121,122-133 1dp9 d1dp9a_ A:154-161,163-169,233-244,245-256 1v9y d1v9yb_ B:31-38,40-46,110-121,122-132 1v9y d1v9ya_ A:31-38,40-46,110-121,122-132 1s66 d1s66u_ U:31-38,40-46,110-121,122-133 1vb6 d1vb6a1 A:31-38,40-46,110-121,122-133 2o9b d2o9ba2 A:39-47,48-55,109-119,120-130 2o9c d2o9ca2 A:39-47,48-55,109-119,120-130 1lsx d1lsxa_ A:154-161,163-169,233-244,245-256 2owj d2owja1 A:154-161,163-169,233-244,245-256 1xj3 d1xj3a1 A:154-161,163-169,233-244,245-256 1dp8 d1dp8a_ A:154-161,163-169,233-244,245-256 1xj2 d1xj2a1 A:154-161,163-169,233-244,245-256 1lsv d1lsva_ A:154-161,163-169,233-244,245-256 2ool d2oolb2 B:43-50,53-61,113-126,127-135 1dp6 d1dp6a_ A:154-161,163-169,233-244,245-256 1xj4 d1xj4a1 A:154-161,163-169,233-244,245-256 1lsw d1lswa_ A:154-161,163-169,233-244,245-256 1mzu d1mzuc_ C:28-35,37-43,104-112,116-124 1xj6 d1xj6a1 A:154-161,163-169,233-244,245-256 2ool d2oola2 A:43-51,52-60,113-126,127-135 1lt0 d1lt0a_ A:155-161,163-169,233-244,245-256 1xj4 d1xj4b1 B:155-161,163-169,233-244,245-256 1xj6 d1xj6b1 B:155-161,163-169,233-244,245-256 2owh d2owha1 A:154-161,163-169,233-244,245-256 1d06 d1d06a_ A:148-155,157-163,227-238,239-250 1xfq d1xfqa1 A:29-35,37-43,103-111,116-125 1drm d1drma_ A:154-161,163-169,233-244,245-256 1y28 d1y28a_ A:155-161,163-169,233-244,245-256 1otd d1otda_ A:28-35,37-43,102-112,117-125 1g28 d1g28c_ C:930-936,941-947,1003-1016,1022-1032 1jnu d1jnub_ B:930-936,941-947,1003-1016,1022-1032 1jnu d1jnud_ D:930-936,941-947,1003-1016,1022-1032 1g28 d1g28d_ D:930-936,941-947,1003-1016,1022-1032 1jnu d1jnua_ A:930-936,941-947,1003-1016,1022-1032 1g28 d1g28a_ A:930-936,941-947,1003-1016,1022-1032 1jnu d1jnuc_ C:930-936,941-947,1003-1016,1022-1032 1g28 d1g28b_ B:930-936,941-947,1003-1016,1022-1032 2qj7 d2qj7a1 A:28-35,37-43,102-112,117-125 1odv d1odvb_ B:28-35,37-43,102-112,117-125 1otd d1otdb_ B:28-35,37-43,102-112,117-125 1d7e d1d7ea_ A:28-35,37-43,102-112,117-125 1oti d1otia_ A:28-35,37-43,102-112,117-125 1ote d1otea_ A:28-35,37-43,102-112,117-125 1ew0 d1ew0a_ A:148-155,157-163,227-238,239-251 1gsw d1gswa_ A:28-35,37-43,102-112,116-125 1gsx d1gsxa_ A:28-35,37-43,102-112,117-125 1f98 d1f98a_ A:28-35,37-43,102-112,117-125 1n9o d1n9oa_ A:20-27,32-38,94-109,111-123 1xfn d1xfna1 A:28-35,37-43,102-111,117-125 1f9i d1f9ia_ A:28-35,37-43,102-112,116-125 1nwz d1nwza_ A:28-35,37-43,102-112,116-125 1ot9 d1ot9a_ A:28-35,37-43,102-112,116-125 2qws d2qwsa1 A:28-35,37-43,102-112,116-125 2qj5 d2qj5a1 A:28-35,37-43,102-112,116-125 3pyp d3pypa_ A:28-35,37-43,102-112,116-125 1uwn d1uwnx_ X:28-35,37-43,102-112,116-125 1uwp d1uwpx1 X:28-35,37-43,102-112,116-125 1ot6 d1ot6a_ A:28-35,37-43,102-112,116-125 1t1a d1t1aa1 A:28-35,37-43,102-112,116-125 2pyp d2pypa_ A:28-35,37-43,102-112,116-125 2pyr d2pyra_ A:28-35,37-43,102-112,116-125 2phy d2phya_ A:28-35,37-43,102-112,116-125 1otb d1otba_ A:28-35,37-43,102-112,116-125 1ts6 d1ts6a1 A:28-35,37-43,102-112,116-125 1ts0 d1ts0a1 A:28-35,37-43,102-112,116-125 1ts8 d1ts8a1 A:28-35,37-43,102-112,116-125 1ts7 d1ts7a1 A:28-35,37-43,102-112,116-125 1s4s d1s4sa_ A:28-35,37-43,102-112,116-125 1odv d1odva_ A:28-35,37-43,102-112,116-125 1s1z d1s1za_ A:28-35,37-43,102-112,116-125 1s1y d1s1ya_ A:28-35,37-43,102-112,116-125 1ota d1otaa_ A:28-35,37-43,102-112,116-125 1kou d1koua_ A:28-35,37-43,102-111,117-125 1s4r d1s4ra_ A:28-35,37-43,102-112,116-125 1n9l d1n9la_ A:20-27,32-38,94-109,111-124 1t1c d1t1ca1 A:28-35,37-43,102-112,116-125 1byw d1bywa_ A:28-34,39-45,103-118,120-135 1t1b d1t1ba1 A:28-35,37-43,102-112,116-125 1t19 d1t19a1 A:28-35,37-43,102-112,116-125 1ugu d1ugua_ A:28-35,37-43,102-111,116-125 2d01 d2d01a1 A:28-35,37-43,102-111,116-125 1t18 d1t18a1 A:28-35,37-43,102-112,116-125 1gsv d1gsva_ A:28-35,37-43,102-112,116-125 2vea d2veaa3 A:30-38,39-46,102-114,116-125 1n9n d1n9na_ A:20-27,32-38,94-109,111-124 1oj5 d1oj5a_ A:260-268,270-277,335-349,355-366 1p97 d1p97a_ A:6-14,15-22,82-94,95-113 3phy d3phya_ A:28-35,37-43,102-111,117-125 1mzu d1mzub_ B:28-35,37-43,100-111,116-124 1mzu d1mzua_ A:28-35,37-43,100-111,116-124 34. c.8.4 PA domain The "swivelling" beta/beta/alpha domain 3 layers: b/b/a; the central sheet is parallel, and the other one is antiparallel; there are some variations in topology ! this domain is thought to be mobile in most multi-domain proteins known to contain it 1cx8 d1cx8d2 D:198-204,207-216,225-231,371-378 1de4 d1de4c2 C:198-206,207-216,225-231,370-378 2pvv d2pvva2 A:126-133,135-141,167-173,339-347 3bi1 d3bi1a2 A:126-133,135-141,167-173,339-347 3bhx d3bhxa2 A:126-133,135-141,167-173,339-347 3bi0 d3bi0a2 A:126-133,135-141,167-173,339-347 1cx8 d1cx8e2 E:198-204,211-216,225-231,371-378 2jbj d2jbja2 A:126-133,135-141,167-172,339-347 1cx8 d1cx8f2 F:198-204,211-216,225-231,371-378 2pvw d2pvwa2 A:126-133,135-141,167-172,339-347 2or4 d2or4a2 A:126-133,135-141,167-172,339-347 2oot d2oota2 A:126-133,135-141,167-172,339-347 1de4 d1de4f2 F:198-205,207-216,225-231,371-378 2c6c d2c6ca2 A:126-133,135-141,167-172,339-347 2cij d2cija2 A:126-133,135-141,167-172,339-347 2jbk d2jbka2 A:126-133,135-141,167-172,339-347 1cx8 d1cx8c2 C:198-204,212-216,225-231,371-378 1cx8 d1cx8b2 B:198-205,211-216,225-231,371-378 2nsu d2nsub2 B:198-205,211-216,225-231,371-378 1de4 d1de4i2 I:198-205,211-216,225-231,371-378 2c6g d2c6ga2 A:126-133,135-141,167-172,340-347 1de4 d1de4i2 I:198-205,207-211,225-231,371-378 2c6p d2c6pa2 A:126-133,135-141,167-171,342-347 35. d.264.1 Prim-pol domain Prim-pol domain consists of two alpha+beta domains 1rni d1rnia_ A:106-114,142-150,156-165,169-174 1g71 d1g71b_ B:140-147,148-155,295-300,301-310 1v33 d1v33a_ A:140-147,148-155,295-300,301-310 1g71 d1g71a_ A:140-147,148-155,295-300,301-310 1v34 d1v34a_ A:140-147,148-155,295-300,301-310 1zt2 d1zt2a1 A:168-173,177-183,250-255,256-263 36. b.175.1 FomD-like FomD barrel-like barrel, closed; n=8, S=12; meander; similar topology to the AOC barrel-like fold (reversed to the lipocalin barrel topology) 2p12 d2p12a1 A:11-19,20-26,89-95,96-103 2p12 d2p12b1 B:11-19,20-26,83-95,96-103 38. b.128.1 Hypothetical protein YojF Hypothetical protein YojF pseudobarrel; capped at one end by an alpha-helix 1njh d1njha_ A:20-30,41-53,90-100,101-111 40. c.8.3 Carbamoyl phosphate synthetase, small subunit N-terminal domain The "swivelling" beta/beta/alpha domain 3 layers: b/b/a; the central sheet is parallel, and the other one is antiparallel; there are some variations in topology ! this domain is thought to be mobile in most multi-domain proteins known to contain it 1c30 d1c30h1 H:3-10,12-21,23-29,128-135 1bxr d1bxrd1 D:3-10,12-21,23-29,128-135 1m6v d1m6vf1 F:3-10,12-21,23-29,128-135 1jdb d1jdbc1 C:3-10,12-21,23-29,128-135 1bxr d1bxrh1 H:3-10,12-21,23-29,128-135 1kee d1keeh1 H:3-10,12-21,23-29,128-135 1cs0 d1cs0h1 H:3-10,12-21,23-29,128-135 1c30 d1c30f1 F:3-10,12-21,23-29,128-135 1cs0 d1cs0d1 D:3-10,12-21,23-29,128-135 1cs0 d1cs0b1 B:3-10,12-21,23-29,128-135 1c3o d1c3od1 D:3-10,12-21,23-29,128-135 1kee d1keed1 D:3-10,12-21,23-29,128-135 1m6v d1m6vb1 B:3-10,12-21,23-29,128-135 1c3o d1c3of1 F:3-10,12-21,23-29,128-135 1t36 d1t36f1 F:3-10,12-21,23-29,128-135 1bxr d1bxrb1 B:3-10,12-21,23-29,128-135 1t36 d1t36b1 B:3-10,12-21,23-29,128-135 1cs0 d1cs0f1 F:3-10,12-21,23-29,128-135 1bxr d1bxrf1 F:3-10,12-21,23-29,128-135 1jdb d1jdbl1 L:3-10,12-21,23-29,128-135 1t36 d1t36d1 D:3-10,12-21,23-29,128-135 1c30 d1c30d1 D:3-10,12-21,23-29,128-135 1a9x d1a9xh1 H:7503-7510,7512-7521,7523-7529,7628-7635 1ce8 d1ce8h1 H:3-10,12-21,23-29,127-135 1a9x d1a9xf1 F:5503-5510,5512-5521,5523-5529,5628-5635 1ce8 d1ce8d1 D:3-10,12-21,23-29,127-135 1a9x d1a9xd1 D:3503-3510,3512-3521,3523-3529,3628-3635 1ce8 d1ce8b1 B:3-10,12-21,24-29,128-135 1jdb d1jdbi1 I:3-10,12-21,24-29,128-135 1jdb d1jdbf1 F:3-10,12-21,24-29,128-135 1m6v d1m6vd1 D:3-10,12-21,23-29,127-135 1c3o d1c3ob1 B:3-10,12-21,24-29,128-135 1m6v d1m6vh1 H:3-10,12-21,23-29,127-135 1t36 d1t36h1 H:3-10,12-18,24-29,128-135 1c3o d1c3oh1 H:3-10,12-18,24-29,128-135 1ce8 d1ce8f1 F:3-10,12-18,24-29,128-135 1kee d1keef1 F:3-10,12-18,24-29,128-135 1kee d1keeb1 B:3-10,12-18,24-29,128-135 1a9x d1a9xb1 B:1503-1510,1512-1518,1524-1529,1628-1635 1c30 d1c30b1 B:3-10,12-18,24-29,127-135 42. d.276.1 Hypothetical protein yfbM Hypothetical protein yfbM beta-alpha(2)-beta-alpha(2)-beta(2)-alpha(n)-beta; 3 layers: a/b/a; antiparallel beta-sheet, order: 21543 1ryl d1ryla_ A:4-11,38-43,83-90,159-166 1ryl d1rylb_ B:4-11,38-43,84-90,159-166 43. d.110.6 Sensory domain-like alpha(2)-beta(2)-alpha(2)-beta(3); possibly related to the PAS domain ! Profilin-like core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha 2hje d2hjea1 A:209-216,217-223,248-255,263-271 2hj9 d2hj9d1 D:209-216,217-223,249-255,263-270 2hj9 d2hj9c1 C:209-216,217-223,249-255,263-270 1zhh d1zhhb1 B:209-216,217-223,250-255,263-270 2p7j d2p7ja2 A:77-86,88-99,148-160,161-172 2p7j d2p7jb2 B:77-86,88-99,148-160,161-172 3by8 d3by8a1 A:95-103,105-110,144-155,157-168 2v9a d2v9ab1 B:55-62,64-68,103-115,117-128 1p0z d1p0zj_ J:55-62,64-69,103-115,117-129 1p0z d1p0zi_ I:55-62,64-69,103-115,117-129 1p0z d1p0za_ A:55-62,64-69,103-115,117-129 1p0z d1p0zd_ D:55-62,64-69,103-115,117-129 1p0z d1p0zf_ F:55-62,64-69,103-115,117-129 1p0z d1p0zh_ H:55-62,64-69,103-115,117-129 1p0z d1p0zc_ C:55-62,64-69,103-115,117-129 1zhh d1zhhb1 B:113-120,121-127,162-178,179-192 1p0z d1p0zb_ B:55-62,64-69,103-115,117-129 1p0z d1p0ze_ E:55-62,64-69,103-115,117-129 2hje d2hjea1 A:113-120,121-127,162-178,179-192 1p0z d1p0zg_ G:55-62,64-69,103-115,117-129 2hj9 d2hj9d1 D:113-120,121-127,162-178,179-192 2p7j d2p7ja1 A:190-195,197-202,244-253,259-267 2p7j d2p7jb1 B:190-195,197-202,244-253,259-267 2hj9 d2hj9c1 C:113-120,121-127,162-178,179-192 2j80 d2j80a1 A:55-62,64-69,103-115,117-129 2j80 d2j80b1 B:55-62,64-69,103-115,117-129 2bas d2basa2 A:309-317,324-330,375-386,388-396 2bas d2basb2 B:310-317,324-330,374-386,388-397 44. b.125.1 Prokaryotic lipoproteins and lipoprotein localization factors LolA-like prokaryotic lipoproteins and lipoprotein localization factors 11 stranded sheet partly folded in a corner-like structure filled with a few short helices 2byo d2byoa1 A:39-49,56-66,179-189,190-201 1iwm d1iwma_ A:29-42,43-56,165-172,173-186 1iwm d1iwmb_ B:29-42,43-56,165-172,173-186 1iwn d1iwna_ A:29-42,43-56,165-172,173-186 1ua8 d1ua8a_ A:14-26,33-43,135-145,147-160 1iwl d1iwla_ A:14-26,32-43,135-145,147-160 45. b.44.1 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain probably related to the second domain and its superfamiy by a circular permutation ! Elongation factor/aminomethyltransferase common domain barrel, closed; n=6, S=10; greek-key 1ije d1ijea2 A:337-346,394-399,420-427,428-440 1efu d1efua2 A:302-312,352-357,370-379,380-389 2b7b d2b7ba2 A:337-346,394-399,420-427,428-440 1efu d1efuc2 C:302-312,352-357,370-379,380-389 1d2e d1d2eb2 B:350-360,400-405,418-427,428-440 2fx3 d2fx3a2 A:302-312,352-357,370-379,380-389 1efc d1efcb2 B:302-312,352-357,371-379,380-389 1efc d1efca2 A:302-312,352-357,371-379,380-389 1dg1 d1dg1g2 G:302-312,352-357,370-379,380-389 1d2e d1d2ec2 C:350-360,400-405,419-427,428-440 1d8t d1d8ta2 A:302-312,352-357,372-379,380-389 1xb2 d1xb2a2 A:350-360,400-404,420-427,428-440 1aip d1aipf2 F:314-324,364-369,382-391,392-401 1d8t d1d8tb2 B:302-312,352-357,372-379,380-389 1d2e d1d2ed2 D:350-360,400-404,418-427,428-440 1d2e d1d2ea2 A:350-360,400-404,418-427,428-440 1dg1 d1dg1h2 H:302-312,352-356,370-379,380-389 1tui d1tuib2 B:314-324,364-368,382-391,392-401 1tui d1tuic2 C:314-324,364-368,382-391,392-401 1tui d1tuia2 A:314-324,364-368,382-391,392-401 1aip d1aipe2 E:314-323,365-375,382-391,392-401 1aip d1aipb2 B:314-323,365-375,382-391,392-401 1aip d1aipa2 A:314-323,365-375,382-391,392-401 2c77 d2c77a2 A:314-323,366-375,382-391,392-401 1xb2 d1xb2a2 A:350-360,404-411,420-427,428-440 1d2e d1d2ea2 A:350-360,404-411,418-427,428-440 2bvn d2bvna2 A:302-312,352-357,371-379,380-389 2bvn d2bvnb2 B:302-312,352-357,370-379,380-389 1ha3 d1ha3b2 B:314-324,364-368,383-391,392-401 1ha3 d1ha3a2 A:314-324,364-368,383-391,392-401 1ttt d1ttta2 A:314-324,364-369,382-391,392-401 1zc8 d1zc8y2 Y:314-324,364-369,382-391,392-401 1d2e d1d2ed2 D:350-360,404-411,418-427,428-440 2c78 d2c78a2 A:314-323,366-375,382-391,392-401 1dg1 d1dg1h2 H:302-312,356-363,370-379,380-389 1tui d1tuib2 B:314-324,368-375,382-391,392-401 1ttt d1tttb2 B:314-324,364-369,382-391,392-401 1d2e d1d2ec2 C:350-360,405-411,419-427,428-440 1d2e d1d2eb2 B:350-360,405-411,418-427,428-440 1tui d1tuic2 C:314-324,368-375,382-391,392-401 1eft d1efta2 A:314-324,364-368,382-391,392-401 1ob2 d1ob2a2 A:302-312,352-357,370-379,380-389 1ha3 d1ha3b2 B:314-324,368-375,383-391,392-401 2b7c d2b7ca2 A:336-346,394-399,421-427,428-437 1tui d1tuia2 A:314-324,368-375,382-391,392-401 1eft d1efta2 A:314-324,368-375,382-391,392-401 1ha3 d1ha3a2 A:314-324,368-375,383-391,392-401 1f60 d1f60a2 A:336-346,394-399,421-427,428-437 1ijf d1ijfa2 A:336-346,394-399,421-427,428-437 1exm d1exma2 A:314-324,368-375,383-391,392-401 1efu d1efuc2 C:302-312,357-363,370-379,380-389 1dg1 d1dg1g2 G:302-312,357-363,370-379,380-389 1exm d1exma2 A:314-324,364-368,383-391,392-401 1efu d1efua2 A:302-312,357-363,370-379,380-389 1f60 d1f60a2 A:336-346,399-405,421-427,428-437 2b7c d2b7ca2 A:336-346,399-405,421-427,428-437 1efc d1efcb2 B:302-312,357-363,371-379,380-389 1b23 d1b23p2 P:314-324,364-368,382-391,392-401 1efc d1efca2 A:302-312,357-363,371-379,380-389 1ijf d1ijfa2 A:336-346,399-405,421-427,428-437 1ob2 d1ob2a2 A:302-312,357-362,370-379,380-389 1zun d1zunb2 B:333-343,388-393,415-422,423-433 1ttt d1tttc2 C:314-324,364-368,382-391,392-401 1jny d1jnya2 A:324-333,384-393,408-415,416-425 1ttt d1tttc2 C:314-324,368-375,382-391,392-401 1b23 d1b23p2 P:314-324,368-375,382-391,392-401 1ob5 d1ob5c2 C:314-324,368-375,383-391,392-401 1ob5 d1ob5e2 E:314-324,368-375,383-391,392-401 1ob5 d1ob5a2 A:314-324,368-375,383-391,392-401 2fx3 d2fx3a2 A:302-312,357-363,370-379,380-389 1d8t d1d8ta2 A:302-312,357-363,372-379,380-389 1g7c d1g7ca2 A:334-346,399-405,421-427,428-437 2bvn d2bvna2 A:302-312,357-363,371-379,380-389 2bvn d2bvnb2 B:302-312,357-363,370-379,380-389 1d8t d1d8tb2 B:302-312,357-363,372-379,380-389 1aip d1aipf2 F:314-324,369-375,382-391,392-401 1ttt d1ttta2 A:314-324,369-375,382-391,392-401 1zc8 d1zc8y2 Y:314-324,369-375,382-391,392-401 1ob5 d1ob5a2 A:314-324,364-368,383-391,392-401 1ob5 d1ob5c2 C:314-324,364-368,383-391,392-401 1ob5 d1ob5e2 E:314-324,364-368,383-391,392-401 1ije d1ijea2 A:337-346,399-405,420-427,428-440 1ttt d1tttb2 B:314-324,369-375,382-391,392-401 2b7b d2b7ba2 A:337-346,399-405,420-427,428-440 1wb2 d1wb2d2 D:277-284,340-346,353-361,368-380 1g7c d1g7ca2 A:334-346,394-399,421-427,428-437 1wb3 d1wb3d2 D:277-284,340-346,353-361,368-380 1wb3 d1wb3b2 B:278-284,340-345,354-360,369-380 1wb3 d1wb3a3 A:278-284,340-345,353-360,369-380 1skq d1skqa2 A:321-334,387-393,408-415,416-425 1wb2 d1wb2b2 B:278-284,340-345,353-360,369-380 1wb1 d1wb1b2 B:278-284,340-345,353-360,369-380 1skq d1skqb2 B:321-334,387-393,408-415,416-425 1wb1 d1wb1d2 D:278-284,340-346,353-361,368-380 1jny d1jnyb2 B:321-334,387-393,409-415,416-425 1zun d1zunb2 B:333-343,393-399,415-422,423-433 2qn6 d2qn6a2 A:327-336,376-383,391-402,403-415 2qmu d2qmua2 A:327-336,376-383,391-402,403-415 1s0u d1s0ua2 A:350-359,399-407,413-424,425-437 1kk0 d1kk0a2 A:323-332,372-380,386-397,398-409 2plf d2plfa2 A:327-336,376-384,393-402,403-414 2aho d2ahoa2 A:327-336,376-383,393-402,403-414 1skq d1skqa2 A:321-334,382-387,408-415,416-425 1kk2 d1kk2a2 A:323-332,372-380,386-397,398-409 1kjz d1kjza2 A:323-332,372-380,386-397,398-409 1skq d1skqb2 B:321-334,382-387,408-415,416-425 1kk3 d1kk3a2 A:323-332,372-380,386-397,398-409 1kk1 d1kk1a2 A:323-332,372-380,386-397,398-409 1jny d1jnyb2 B:321-334,382-387,409-415,416-425 2pmd d2pmda2 A:327-336,376-384,392-402,403-414 2pmd d2pmdb2 B:327-336,376-384,393-402,403-414 47. d.110.8 YeeU-like beta(2)-alpha-beta(3); 2 layers, a/b; there is an oligomerization interface instead of the 'missing' helical layer ! Profilin-like core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha 2inw d2inwa1 A:28-38,47-52,96-103,108-117 2inw d2inwb1 B:28-38,47-52,96-103,108-117 2h28 d2h28a1 A:28-38,47-52,96-103,108-117 2h28 d2h28b1 B:28-38,47-52,96-103,108-117 2ea9 d2ea9a1 A:21-31,40-45,89-96,101-110 2inw d2inwa1 A:28-38,39-43,96-103,108-117 2h28 d2h28b1 B:28-38,39-43,96-103,108-117 2inw d2inwb1 B:28-38,39-43,96-103,108-117 2h28 d2h28a1 A:28-38,39-43,96-103,108-117 2ea9 d2ea9a1 A:21-31,32-36,89-96,101-110 49. b.61.1 Avidin/streptavidin Streptavidin-like barrel, closed; n=8, S=10; meander 1swf d1swfb_ B:52-62,70-79,26-35,36-45 1swg d1swgc_ C:53-62,68-79,26-34,36-46 1swf d1swfa_ A:52-61,70-79,26-35,37-45 1swg d1swga_ A:53-61,68-79,26-35,37-46 1swg d1swgb_ B:53-61,68-79,26-35,37-46 1swf d1swfc_ C:52-61,68-79,26-35,37-45 1swg d1swgd_ D:52-61,68-79,26-35,37-45 1swf d1swfd_ D:52-61,68-79,26-35,37-45 1i9h d1i9ha_ A:18-24,26-35,101-113,122-134 1vwl d1vwlb_ B:18-24,26-35,101-113,122-134 1vwj d1vwjb_ B:18-24,26-35,101-113,122-134 1vwk d1vwkb_ B:18-24,26-35,101-113,122-134 1vwi d1vwib_ B:18-24,26-35,101-113,122-134 2rtc d2rtcb_ B:18-24,26-35,101-113,122-134 1slg d1slgb_ B:18-24,26-35,101-113,122-134 2izc d2izcb_ B:18-24,26-35,101-113,122-134 2izd d2izdb_ B:18-24,26-35,101-113,122-134 1slf d1slfb_ B:18-24,26-35,101-113,122-134 1str d1strb_ B:18-24,26-35,101-113,122-134 2rtq d2rtqb_ B:18-24,26-35,101-113,122-134 2rtr d2rtrb_ B:18-24,26-35,101-113,122-134 2rti d2rtib_ B:18-24,26-35,101-113,122-134 2rth d2rthb_ B:18-24,26-35,101-113,122-134 2rtp d2rtpb_ B:18-24,26-35,101-113,122-134 1sts d1stsb_ B:18-24,26-35,101-113,122-134 2rtn d2rtnb_ B:18-24,26-35,101-113,122-134 2rto d2rtob_ B:18-24,26-35,101-113,122-134 1srf d1srfa_ A:18-24,26-35,101-113,122-133 1srj d1srja_ A:18-24,26-35,101-113,122-133 2izf d2izfb_ B:18-24,26-35,101-113,122-133 2ize d2izeb_ B:18-24,26-35,101-113,122-133 1vwa d1vwab_ B:18-24,26-35,101-113,122-134 1srh d1srha_ A:18-24,26-35,101-113,122-133 1luq d1luqa_ A:1018-1024,1026-1035,1101-1113,1122-1133 1mk5 d1mk5a_ A:18-24,26-35,101-113,122-133 2izh d2izhb_ B:18-24,26-35,101-113,122-133 1pts d1ptsa_ A:18-24,26-35,101-113,122-133 1lcz d1lcza_ A:18-24,26-35,101-113,122-133 2rtb d2rtbb_ B:18-24,26-35,101-113,122-133 1lcw d1lcwa_ A:18-24,26-35,101-113,122-133 2izl d2izlb_ B:18-24,26-35,101-113,122-133 1lcv d1lcva_ A:18-24,26-35,101-113,122-133 1srg d1srga_ A:18-24,26-35,101-113,122-133 2rtg d2rtgb_ B:18-24,26-35,101-113,122-133 1df8 d1df8a_ A:18-24,26-35,101-113,122-133 2gh7 d2gh7a1 A:18-24,26-35,101-113,122-133 2f01 d2f01a1 A:18-24,26-35,101-113,122-133 2rtd d2rtdb_ B:18-24,26-35,101-113,122-133 1sre d1srea_ A:18-24,26-35,101-113,122-133 1sri d1sria_ A:18-24,26-35,101-113,122-133 2rtf d2rtfb_ B:18-24,26-35,101-113,122-133 2izg d2izgb_ B:18-24,26-35,101-113,122-133 2rte d2rteb_ B:18-24,26-35,101-113,122-133 1sle d1sleb_ B:18-24,26-35,101-113,122-133 1swt d1swta_ A:18-24,26-35,101-113,122-133 2a8g d2a8ga1 A:7-13,15-25,90-102,112-123 1ndj d1ndjc_ C:18-24,26-35,101-113,122-132 1swd d1swda_ A:18-24,26-35,101-113,122-132 1n43 d1n43b_ B:18-24,26-35,101-113,122-132 1swu d1swua_ A:18-24,26-35,101-113,122-132 2a5b d2a5ba1 A:7-13,15-25,90-102,112-123 1srf d1srfb_ B:18-24,26-35,101-113,122-132 1swh d1swha_ A:18-24,26-35,101-113,122-132 1rxj d1rxjd_ D:18-24,26-35,101-113,122-132 1luq d1luqb_ B:2018-2024,2026-2035,2101-2113,2122-2132 1swj d1swjb_ B:18-24,26-35,101-113,122-132 1mk5 d1mk5b_ B:18-24,26-35,101-113,122-132 1nc9 d1nc9a_ A:18-24,26-35,101-113,122-132 1swr d1swrd_ D:18-24,26-35,101-113,122-132 1n9y d1n9ya_ A:18-24,26-35,101-113,122-132 1swd d1swdb_ B:18-24,26-35,101-113,122-132 1nc9 d1nc9b_ B:18-24,26-35,101-113,122-132 1swq d1swqa_ A:18-24,26-35,101-113,122-132 1nbx d1nbxa_ A:18-24,26-35,101-113,122-132 1n7y d1n7yb_ B:18-24,26-35,101-113,122-132 1df8 d1df8b_ B:18-24,26-35,101-113,122-132 1nqm d1nqmd_ D:618-624,626-635,701-713,722-732 1ndj d1ndjb_ B:18-24,26-35,101-113,122-132 1ldo d1ldob_ B:207-213,215-225,289-302,312-323 1moy d1moya_ A:18-24,26-35,101-113,122-132 1swo d1swoa_ A:18-24,26-35,101-113,122-132 1n43 d1n43c_ C:18-24,26-35,101-113,122-132 1nbx d1nbxd_ D:18-24,26-35,101-113,122-132 1nbx d1nbxc_ C:18-24,26-35,101-113,122-132 1srh d1srhb_ B:18-24,26-35,101-113,122-132 1nqm d1nqma_ A:18-24,26-35,101-113,122-132 1swu d1swud_ D:18-24,26-35,101-113,122-132 1slf d1slfd_ D:18-24,26-35,101-113,122-132 2g5l d2g5lb1 B:18-24,26-35,101-113,122-132 2f01 d2f01b1 B:18-24,26-35,101-113,122-132 2gh7 d2gh7b1 B:18-24,26-35,101-113,122-132 1rxj d1rxja_ A:18-24,26-35,101-113,122-132 1swr d1swrc_ C:18-24,26-35,101-113,122-132 1ndj d1ndjd_ D:18-24,26-35,101-113,122-132 1n9m d1n9md_ D:18-24,26-35,102-113,122-132 1ndj d1ndja_ A:18-24,26-35,101-113,122-132 1rxk d1rxka_ A:18-24,26-35,101-113,122-132 2rtr d2rtrd_ D:18-24,26-35,101-113,122-132 1nc9 d1nc9c_ C:18-24,26-35,101-113,122-132 2cam d2camb_ B:7-13,15-25,89-102,112-123 1n43 d1n43a_ A:18-24,26-35,101-113,122-132 2a5b d2a5bb1 B:7-13,15-25,89-102,112-123 2izf d2izfd_ D:18-24,26-35,101-113,122-132 1nbx d1nbxb_ B:18-24,26-35,101-113,122-132 1nc9 d1nc9d_ D:18-24,26-35,101-113,122-132 1ij8 d1ij8b_ B:207-213,215-225,289-302,312-323 1n7y d1n7ya_ A:18-24,26-35,101-113,122-132 1sri d1srib_ B:18-24,26-35,101-113,122-132 1nqm d1nqmb_ B:218-224,226-235,301-313,322-332 2rtd d2rtdd_ D:18-24,26-35,101-113,122-132 1swr d1swrb_ B:18-24,26-35,101-113,122-132 1swk d1swka_ A:18-24,26-35,101-113,122-132 1kl5 d1kl5d_ D:18-24,26-35,101-113,122-132 1hxz d1hxzb_ B:18-24,26-35,101-113,122-132 2rtn d2rtnd_ D:18-24,26-35,101-113,122-132 1swo d1swod_ D:18-24,26-35,101-113,122-132 2rtg d2rtgd_ D:18-24,26-35,101-113,122-132 1sre d1sreb_ B:18-24,26-35,101-113,122-132 2ize d2ized_ D:18-24,26-35,101-113,122-132 1mm9 d1mm9a_ A:18-24,26-35,101-113,122-132 2rtq d2rtqd_ D:18-24,26-35,101-113,122-132 1stp d1stpa_ A:18-24,26-35,101-113,122-132 1swk d1swkc_ C:18-24,26-35,101-113,122-132 1srj d1srjb_ B:18-24,26-35,101-113,122-132 1swa d1swaa_ A:18-24,26-35,101-113,122-132 2izd d2izdd_ D:18-24,26-35,101-113,122-132 2rtb d2rtbd_ D:18-24,26-35,101-113,122-132 1kl4 d1kl4a_ A:18-24,26-35,101-113,122-132 1n43 d1n43d_ D:18-24,26-35,101-113,122-132 2rtc d2rtcd_ D:18-24,26-35,101-113,122-132 1vwo d1vwob_ B:18-24,26-35,101-113,122-132 2rti d2rtid_ D:18-24,26-35,101-113,122-132 1mep d1mepc_ C:18-24,26-35,101-113,122-132 1kl3 d1kl3d_ D:18-24,26-35,101-113,122-132 1rxk d1rxkb_ B:18-24,26-35,101-113,122-132 1hxl d1hxlb_ B:18-24,26-35,101-113,122-132 1swe d1swea_ A:18-24,26-35,101-113,122-132 1vwk d1vwkd_ D:18-24,26-35,101-113,122-132 1swl d1swla_ A:18-24,26-35,101-113,122-132 1nqm d1nqmc_ C:418-424,426-435,501-513,522-532 1kl3 d1kl3a_ A:18-24,26-35,101-113,122-132 2izi d2izia_ A:18-24,26-35,101-113,122-132 2rtf d2rtfd_ D:18-24,26-35,101-113,122-132 1rxj d1rxjb_ B:18-24,26-35,101-113,122-132 1srg d1srgb_ B:18-24,26-35,101-113,122-132 1hxz d1hxza_ A:18-24,26-35,101-113,122-132 1hxl d1hxla_ A:18-24,26-35,101-113,122-132 1swr d1swra_ A:18-24,26-35,101-113,122-132 2izh d2izhd_ D:18-24,26-35,101-113,122-132 1avd d1avdb_ B:7-13,15-25,89-102,112-123 2izg d2izgd_ D:18-24,26-35,101-113,122-132 1slg d1slgd_ D:18-24,26-35,101-113,122-132 2izj d2izja_ A:18-24,26-35,101-113,122-132 1n7y d1n7yc_ C:18-24,26-35,101-113,122-132 2qcb d2qcba1 A:18-24,26-35,101-113,122-132 1kl5 d1kl5a_ A:18-24,26-35,101-113,122-132 2rtp d2rtpd_ D:18-24,26-35,101-113,122-132 1vwl d1vwld_ D:18-24,26-35,101-113,122-132 1vwh d1vwhb_ B:18-24,26-35,101-113,122-132 1swe d1sweb_ B:18-24,26-35,101-113,122-132 1mep d1mepd_ D:18-24,26-35,101-113,122-132 1rxh d1rxhb_ B:218-224,226-235,301-313,322-332 1ldo d1ldoa_ A:7-13,15-25,89-102,112-123 1ldq d1ldqb_ B:207-213,215-225,289-302,312-323 1rxj d1rxjc_ C:18-24,26-35,101-113,122-132 2rth d2rthd_ D:18-24,26-35,101-113,122-132 1lcv d1lcvb_ B:218-224,226-235,301-313,322-332 1n9y d1n9yb_ B:17-24,26-35,101-113,122-132 1swp d1swpa_ A:18-24,26-35,101-113,122-132 1swj d1swja_ A:18-24,26-35,101-113,122-132 1swh d1swhd_ D:18-24,26-35,101-113,122-132 1swh d1swhc_ C:18-24,26-35,101-113,122-132 1swk d1swkb_ B:18-24,26-35,101-113,122-132 2rtj d2rtja_ A:18-24,26-35,101-113,122-132 1hqq d1hqqd_ D:18-24,26-35,101-113,122-132 1swq d1swqd_ D:18-24,26-35,101-113,122-132 1swk d1swkd_ D:18-24,26-35,101-113,122-132 1rsu d1rsub_ B:18-24,26-35,101-113,122-132 1kl5 d1kl5b_ B:18-24,26-35,101-113,122-132 1swh d1swhb_ B:18-24,26-35,101-113,122-132 2a8g d2a8gb1 B:7-13,15-25,89-102,112-123 2rte d2rted_ D:18-24,26-35,101-113,122-132 1mep d1mepb_ B:18-24,26-35,101-113,122-132 1swl d1swld_ D:18-24,26-35,101-113,122-132 1hqq d1hqqa_ A:18-24,26-35,101-113,122-132 1hqq d1hqqc_ C:18-24,26-35,101-113,122-132 1kl3 d1kl3b_ B:18-24,26-35,101-113,122-132 1pts d1ptsb_ B:18-24,26-35,101-113,122-132 1kl4 d1kl4d_ D:18-24,26-35,101-113,122-132 2izb d2izba_ A:18-24,26-35,101-113,122-132 1vwg d1vwgb_ B:18-24,26-35,101-113,122-132 2rtk d2rtka_ A:18-24,26-35,101-113,122-132 2rta d2rtaa_ A:18-24,26-35,101-113,122-132 1vwj d1vwjd_ D:18-24,26-35,101-113,122-132 1ij8 d1ij8a_ A:7-13,15-25,89-102,112-123 1swj d1swjc_ C:18-24,26-35,101-113,122-132 2rtm d2rtma_ A:18-24,25-35,101-113,122-132 1rst d1rstb_ B:18-24,26-35,101-113,122-132 1hy2 d1hy2d_ D:18-24,26-35,101-113,122-132 2a5c d2a5cb1 B:7-13,15-25,89-102,112-123 1kff d1kffc_ C:18-24,26-35,101-113,122-132 2izl d2izld_ D:18-24,26-35,101-113,122-132 2izc d2izcd_ D:18-24,26-35,101-113,122-132 1swb d1swba_ A:18-24,26-35,101-113,122-132 2izk d2izka_ A:18-24,26-35,101-113,122-132 1hqq d1hqqb_ B:18-24,26-35,101-113,122-132 1kff d1kffd_ D:18-24,26-35,101-113,122-132 1swq d1swqb_ B:18-24,26-35,101-113,122-132 1kff d1kffb_ B:18-24,26-35,101-113,122-132 1vwe d1vweb_ B:18-24,26-35,101-113,122-132 1lcz d1lczb_ B:218-224,226-235,301-313,322-332 1lcw d1lcwb_ B:218-224,226-235,301-313,322-332 1vwi d1vwid_ D:18-24,26-35,101-113,122-132 1vwq d1vwqb_ B:18-24,26-35,101-113,122-132 1vwn d1vwnb_ B:18-24,26-35,101-113,122-132 1hy2 d1hy2c_ C:18-24,26-35,101-113,122-132 1vwm d1vwmb_ B:18-24,26-35,101-113,122-132 1swd d1swdc_ C:18-24,26-35,101-113,122-132 1swe d1swec_ C:18-24,26-35,101-113,122-132 1n9y d1n9yd_ D:18-24,26-35,101-113,122-132 1swu d1swub_ B:18-24,26-35,101-113,122-132 1swq d1swqc_ C:18-24,26-35,101-113,122-132 1swl d1swlb_ B:18-24,26-35,101-113,122-132 1swo d1swob_ B:18-24,26-35,101-113,122-132 1swp d1swpc_ C:18-24,26-35,101-113,122-132 1str d1strd_ D:18-24,26-35,101-113,122-132 1avd d1avda_ A:7-13,15-25,89-102,112-123 1vwp d1vwpb_ B:18-24,26-35,101-113,122-132 1vwa d1vwad_ D:18-24,26-35,101-113,122-132 1swo d1swoc_ C:18-24,26-35,101-113,122-132 1mep d1mepa_ A:18-24,26-35,101-113,122-132 1ldq d1ldqa_ A:7-13,15-25,90-102,112-123 1swp d1swpd_ D:18-24,26-35,101-113,122-132 1i9h d1i9hb_ B:218-224,226-235,301-313,322-332 1swd d1swdd_ D:18-24,26-35,101-113,122-132 1swe d1swed_ D:18-24,26-35,101-113,122-132 1kl5 d1kl5c_ C:18-24,26-35,101-113,122-132 1kl3 d1kl3c_ C:18-24,26-35,101-113,122-132 1vwr d1vwrb_ B:18-24,26-35,101-113,122-132 2iza d2izaa_ A:18-24,26-35,101-113,122-132 2rtl d2rtla_ A:18-24,25-35,101-113,122-132 1kl4 d1kl4b_ B:18-24,26-35,101-113,122-132 1swp d1swpb_ B:18-24,26-35,101-113,122-132 1swb d1swbd_ D:18-24,26-35,101-113,122-132 2rto d2rtod_ D:18-24,26-35,101-113,122-132 1hy2 d1hy2a_ A:18-24,26-35,101-113,122-132 1kff d1kffa_ A:18-24,26-35,101-113,122-132 1n7y d1n7yd_ D:18-24,26-35,101-113,122-132 1kl4 d1kl4c_ C:18-24,26-35,101-113,122-132 1rxh d1rxha_ A:18-24,26-35,101-113,122-132 1swa d1swab_ B:18-24,26-35,101-113,122-132 2a5c d2a5ca1 A:7-13,15-25,89-102,112-123 1ave d1avea_ A:7-13,15-25,89-102,112-123 2bc3 d2bc3b1 B:18-24,26-35,101-113,122-132 1n9m d1n9mc_ C:18-24,26-35,101-113,122-132 1swc d1swca_ A:18-24,26-35,101-113,122-132 2cam d2cama_ A:7-13,15-25,89-102,112-123 1hy2 d1hy2b_ B:18-24,26-35,101-113,122-132 1swa d1swac_ C:18-24,26-35,101-113,122-132 1lel d1lela_ A:7-13,15-25,89-102,112-123 1swn d1swnd_ D:18-24,26-35,101-113,122-132 1swc d1swcd_ D:18-24,26-35,101-113,122-132 1n9m d1n9ma_ A:18-24,26-35,101-113,122-132 2bc3 d2bc3a1 A:18-24,26-35,101-113,122-132 1ave d1aveb_ B:7-13,15-25,89-102,112-123 1swb d1swbb_ B:18-24,26-35,101-113,122-132 1swl d1swlc_ C:18-24,26-35,101-113,122-132 1sts d1stsd_ D:18-24,26-35,101-113,122-132 1swj d1swjd_ D:18-24,26-35,101-113,122-132 1swn d1swna_ A:18-24,26-35,101-113,122-132 1n9y d1n9yc_ C:18-24,26-35,101-113,122-132 1vwb d1vwbb_ B:18-24,26-35,101-113,122-132 1swb d1swbc_ C:18-24,26-35,101-113,122-132 1swu d1swuc_ C:18-24,26-35,101-113,122-132 1sld d1sldb_ B:18-24,26-35,101-113,122-132 1n9m d1n9mb_ B:18-24,26-35,101-113,122-132 1n4j d1n4ja_ A:18-24,26-35,101-113,122-132 1sle d1sled_ D:18-24,26-35,101-113,122-132 1vwd d1vwdb_ B:18-24,26-35,101-113,122-132 1vwf d1vwfb_ B:18-24,26-35,101-113,122-132 1swn d1swnb_ B:18-24,26-35,101-113,122-132 1swc d1swcc_ C:18-24,26-35,101-113,122-132 1swa d1swad_ D:18-24,26-35,101-113,122-132 2avi d2avia_ A:7-13,15-25,89-102,112-123 1swc d1swcb_ B:18-24,26-35,101-113,122-132 1rav d1rava_ A:7-13,15-25,89-102,112-123 1nqn d1nqnb_ B:207-213,215-225,290-302,312-323 2avi d2avib_ B:7-13,15-25,89-102,112-123 1sws d1swsa_ A:18-24,26-35,101-113,122-132 1nqn d1nqna_ A:7-13,15-25,89-102,112-123 1vwc d1vwcb_ B:18-24,26-35,101-113,122-132 1swn d1swnc_ C:18-24,26-35,101-113,122-132 1sws d1swsd_ D:18-24,26-35,101-113,122-132 1sws d1swsb_ B:18-24,26-35,101-113,122-132 1swt d1swtb_ B:18-24,26-35,101-113,122-132 2g5l d2g5la1 A:18-24,26-32,101-113,122-132 1rav d1ravb_ B:7-13,16-25,89-102,112-123 1lel d1lelb_ B:207-213,215-225,289-302,312-323 1sws d1swsc_ C:18-23,26-35,101-113,122-132 51. e.17.1 D-aminoacid aminotransferase-like PLP-dependent enzymes D-aminoacid aminotransferase-like PLP-dependent enzymes 2 domains: (1) alpha+beta: beta3-alpha2-beta2; (2) alpha/beta, a part of its mixed sheet forms barrel: n=6, S=8 1a3g d1a3gc_ C:6-11,12-17,93-102,117-126 1a3g d1a3ga_ A:6-11,12-17,93-102,117-126 1a3g d1a3gb_ B:6-11,12-17,93-102,117-126 1iyd d1iyda_ A:6-11,12-17,92-102,117-125 1i1k d1i1ka_ A:6-11,12-17,93-102,117-126 1iyd d1iydb_ B:6-11,12-17,92-102,117-125 1iye d1iyeb_ B:6-11,12-17,93-102,117-125 1i1k d1i1kc_ C:1006-1011,1012-1017,1093-1102,1117-1126 1i1k d1i1kb_ B:506-511,512-517,593-602,617-626 1iye d1iyec_ C:6-11,12-17,92-102,117-125 1i1l d1i1lb_ B:506-511,512-517,592-602,617-625 1iye d1iyea_ A:6-11,12-17,92-102,117-125 1i1l d1i1lc_ C:1006-1011,1012-1017,1092-1102,1117-1125 1iyd d1iydc_ C:6-11,12-17,92-102,117-125 1i1l d1i1la_ A:6-11,12-17,92-102,117-125 1i1m d1i1mb_ B:506-511,512-517,592-602,617-625 1i1m d1i1mc_ C:1006-1011,1012-1017,1092-1102,1117-1125 1i1m d1i1ma_ A:6-11,12-17,92-102,117-125 4daa d4daab_ B:1-6,7-12,83-94,108-119 1g2w d1g2wa_ A:1-6,7-12,83-94,108-119 2daa d2daab_ B:1-6,7-12,83-94,108-119 1g2w d1g2wb_ B:1-6,7-12,83-94,108-119 3daa d3daaa_ A:1-6,7-12,83-94,108-119 3daa d3daab_ B:1-6,7-12,83-94,108-119 4daa d4daaa_ A:1-6,7-12,83-94,108-119 2daa d2daaa_ A:1-6,7-12,83-94,108-119 1daa d1daab_ B:1-6,7-12,83-94,108-119 2hhf d2hhfa1 A:36-45,46-56,137-149,159-172 2dab d2daba_ A:1-6,7-12,83-94,108-119 1ekv d1ekva_ A:36-45,47-56,137-149,159-172 2dab d2dabb_ B:1-6,7-12,83-94,108-118 5daa d5daab_ B:1-6,7-12,83-96,108-118 1a0g d1a0gb_ B:1-6,7-12,83-94,108-118 1a0g d1a0ga_ A:1-6,7-12,83-94,108-118 1daa d1daaa_ A:1-6,7-12,83-94,108-118 5daa d5daaa_ A:1-6,7-12,83-96,108-118 1ekv d1ekvb_ B:36-45,47-56,137-150,159-172 1kt8 d1kt8b_ B:536-545,547-556,637-650,659-672 1kta d1ktab_ B:536-545,547-556,637-650,659-672 1i2l d1i2la_ A:1-5,6-10,75-89,99-108 1et0 d1et0a_ A:7-11,12-20,90-106,116-125 1kt8 d1kt8a_ A:36-45,47-56,137-150,159-172 1ekf d1ekfa_ A:36-45,50-56,137-150,159-172 1ekp d1ekpb_ B:36-45,50-56,137-150,159-172 1kta d1ktaa_ A:36-45,50-56,137-150,159-172 2a1h d2a1ha1 A:36-45,50-56,137-150,159-172 1i2k d1i2ka_ A:1-5,6-10,75-89,96-108 2hhf d2hhfb1 B:536-545,546-550,637-650,659-672 2hhf d2hhfb1 B:536-545,550-556,637-650,659-672 2a1h d2a1hb1 B:36-45,50-56,137-150,159-172 1ekp d1ekpa_ A:36-45,50-56,137-150,159-172 1ekf d1ekfb_ B:36-45,50-56,137-150,159-172 53. f.4.3 Porins Transmembrane beta-barrels not a true fold, gathers together transmembrane barrels of different (n,S) 1po3 d1po3b_ B:224-234,242-251,697-707,731-741 1nqf d1nqfa_ A:137-146,148-160,558-567,584-594 1nqh d1nqha_ A:137-146,147-160,558-567,584-594 1ujw d1ujwa_ A:137-146,148-160,558-567,584-594 2ysu d2ysua1 A:137-146,147-160,558-567,584-594 1nqe d1nqea_ A:137-146,148-160,558-567,584-594 1pnz d1pnza_ A:221-234,242-253,697-707,731-741 2guf d2gufa1 A:137-146,148-161,558-567,584-594 2gsk d2gska1 A:137-146,147-161,558-567,584-594 1nqg d1nqga_ A:137-146,148-161,558-567,584-594 1fcp d1fcpa_ A:160-170,172-184,682-691,713-723 2grx d2grxa1 A:160-170,172-185,684-693,715-725 2grx d2grxb1 B:160-170,172-185,684-693,715-725 1qff d1qffa_ A:160-170,172-185,684-693,715-725 1by5 d1by5a_ A:160-170,172-185,673-682,704-714 1qjq d1qjqa_ A:160-170,172-185,684-693,715-725 1by3 d1by3a_ A:160-170,172-185,673-682,704-714 1fep d1fepa_ A:152-165,168-184,668-677,714-724 1qkc d1qkca_ A:160-170,171-185,684-693,715-725 1fi1 d1fi1a_ A:160-170,171-185,684-693,715-725 1qfg d1qfga_ A:160-170,171-185,684-693,715-725 2fcp d2fcpa_ A:160-170,171-185,682-691,713-723 1kmo d1kmoa_ A:222-234,242-255,697-707,731-741 1po3 d1po3a_ A:222-234,242-255,697-707,731-741 1po0 d1po0a_ A:222-234,242-255,697-707,731-741 1kmp d1kmpa_ A:224-235,242-255,697-707,731-741 8prn d8prna_ A:1-16,24-42,264-275,278-289 1prn d1prna_ A:1-16,24-42,264-275,278-289 2prn d2prna_ A:1-16,24-42,264-275,278-289 6prn d6prna_ A:1-16,24-42,264-275,278-289 5prn d5prna_ A:1-16,24-42,264-275,278-289 1bh3 d1bh3a_ A:1-16,24-42,264-275,278-289 1h6s d1h6s1_ 1:1-16,24-42,264-275,278-289 3prn d3prna_ A:1-16,24-42,264-275,278-289 2por d2pora_ A:1-16,17-36,274-285,291-301 3por d3pora_ A:1-16,17-36,274-286,291-301 7prn d7prna_ A:1-16,24-42,264-276,278-289 1mpf d1mpfa_ A:8-24,35-52,306-317,329-340 1gfn d1gfna_ A:8-24,35-52,306-317,329-340 1gfp d1gfpa_ A:8-24,35-52,306-317,329-340 1opf d1opfe_ E:8-24,35-52,306-317,329-340 1opf d1opff_ F:8-24,35-52,306-317,329-340 1opf d1opfb_ B:8-24,35-52,306-317,329-340 1opf d1opfc_ C:8-24,35-52,306-317,329-340 1opf d1opfa_ A:8-24,35-52,306-317,329-340 1opf d1opfd_ D:8-24,35-52,306-317,329-340 1gfq d1gfqa_ A:8-24,35-52,306-317,329-340 1gfo d1gfoa_ A:8-24,35-52,306-317,329-340 1hxt d1hxta_ A:8-24,35-52,306-317,329-340 1hxx d1hxxa_ A:8-24,35-52,306-317,329-340 1pho d1phoa_ A:8-24,36-52,306-317,329-340 1bt9 d1bt9a_ A:8-24,35-52,306-317,329-340 1gfm d1gfma_ A:8-24,34-52,306-317,329-340 2omf d2omfa_ A:8-24,34-52,306-317,329-340 2zfg d2zfga1 A:8-24,34-52,306-317,329-340 2zld d2zlda1 A:8-24,35-52,306-317,329-340 2zld d2zldb1 B:8-24,35-52,306-317,329-340 1hxu d1hxua_ A:8-24,34-52,306-317,329-340 1osm d1osma_ A:8-24,35-52,306-317,329-340 1osm d1osmc_ C:8-24,35-52,306-317,329-340 1osm d1osmb_ B:8-24,35-52,306-317,329-340 1t16 d1t16a_ A:42-60,75-88,380-393,401-422 1t16 d1t16b_ B:42-60,75-88,380-393,401-422 2fgq d2fgqx1 X:3-19,22-32,285-300,317-332 1oh2 d1oh2r_ R:72-87,116-130,437-450,471-483 1a0t d1a0tr_ R:72-87,116-130,437-450,471-483 1oh2 d1oh2q_ Q:72-87,116-130,437-450,471-483 1a0t d1a0tq_ Q:72-87,116-130,437-450,471-483 1a0t d1a0tp_ P:72-87,116-130,437-450,471-483 1oh2 d1oh2p_ P:72-87,116-130,437-450,471-483 1a0s d1a0sq_ Q:72-87,116-130,437-450,471-483 1a0s d1a0sp_ P:72-87,116-130,437-450,471-483 1a0s d1a0sr_ R:72-87,115-130,437-450,471-483 1e54 d1e54a_ A:1-19,22-32,285-300,317-332 2fgr d2fgra1 A:1-19,22-32,285-300,317-332 1mpo d1mpoa_ A:1-15,39-54,359-363,406-421 1mpo d1mpoc_ C:1-15,39-54,359-363,406-421 1mpo d1mpob_ B:1-15,39-54,359-363,406-421 1af6 d1af6b_ B:1-15,39-54,359-363,406-421 1mpq d1mpqb_ B:1-15,39-54,359-363,406-421 1mpq d1mpqa_ A:1-15,39-54,359-363,406-421 1mpq d1mpqc_ C:1-15,39-54,359-363,406-421 1af6 d1af6c_ C:1-15,39-54,359-363,406-421 1mpm d1mpmb_ B:1-15,39-54,359-363,406-421 1af6 d1af6a_ A:1-15,39-54,359-363,406-421 1mpm d1mpmc_ C:1-15,39-54,359-363,406-421 1mpm d1mpma_ A:1-15,39-54,359-363,406-421 1t1l d1t1lb_ B:42-60,75-89,380-400,401-421 1mpn d1mpna_ A:1-15,39-54,359-363,406-421 1mpn d1mpnb_ B:1-15,39-54,359-363,406-421 1mpn d1mpnc_ C:1-15,39-54,359-363,406-421 1mpr d1mprb_ B:1-15,39-54,369-373,412-427 1mpr d1mprc_ C:1-15,39-54,369-373,412-427 2mpr d2mprb_ B:1-15,39-54,369-373,412-427 1mpr d1mpra_ A:1-15,39-54,369-373,412-427 2mpr d2mprc_ C:1-15,39-54,369-373,412-427 1mal d1malb_ B:1-15,39-54,359-363,406-421 1mal d1mala_ A:1-15,39-54,359-363,406-421 1mal d1malc_ C:1-15,39-54,359-363,406-421 2mpr d2mpra_ A:1-15,39-54,369-373,412-427 1mpq d1mpqb_ B:1-15,39-54,363-375,406-421 1mpq d1mpqa_ A:1-15,39-54,363-375,406-421 1mpq d1mpqc_ C:1-15,39-54,363-375,406-421 1t1l d1t1la_ A:42-62,75-89,380-400,401-421 54. b.43.3 Translation proteins Reductase/isomerase/elongation factor common domain barrel, closed; n=6, S=10; greek-key 2f1l d2f1la2 A:7-18,23-29,40-47,83-90 1d1n d1d1na_ A:146-159,163-172,179-186,228-234 1g7s d1g7sa1 A:231-242,246-255,262-269,320-327 1g7r d1g7ra1 A:231-242,246-255,262-269,320-327 1vq6 d1vq6b1 B:36-49,159-167,196-210,305-314 1d2e d1d2ec1 C:258-263,271-281,286-295,335-342 1g7t d1g7ta1 A:231-242,246-255,262-269,320-327 1d2e d1d2ed1 D:258-263,271-281,286-295,335-342 2qa4 d2qa4b1 B:37-47,159-167,196-210,305-314 1sqr d1sqra_ A:2-13,19-26,41-48,82-87 1elo d1eloa1 A:308-319,323-332,337-345,386-392 1jny d1jnya1 A:232-243,247-256,262-269,309-315 2ogm d2ogmb1 B:1-11,21-27,101-109,192-201 2plf d2plfa1 A:213-222,235-244,250-257,314-319 1d2e d1d2ea1 A:258-263,271-281,286-294,336-342 1kjz d1kjza1 A:209-218,231-240,246-253,308-314 1kk2 d1kk2a1 A:209-218,231-240,246-253,308-314 2hvy d2hvyb1 B:1-12,14-22,26-33,68-73 1kk3 d1kk3a1 A:209-218,231-240,246-253,308-314 1kk1 d1kk1a1 A:209-218,231-240,246-253,308-314 1d2e d1d2eb1 B:258-263,271-281,286-294,335-342 1xb2 d1xb2a1 A:258-263,271-281,287-294,336-342 1aip d1aipb1 B:221-226,235-244,250-257,299-306 1ha3 d1ha3a1 A:221-228,234-244,249-257,299-306 1s0u d1s0ua1 A:236-245,258-267,273-280,335-341 1aip d1aipa1 A:221-226,234-244,250-257,300-306 1r5o d1r5oa1 A:469-479,481-490,496-503,545-549 1ttt d1tttc1 C:221-226,234-244,249-257,300-306 1aip d1aipe1 E:221-226,234-244,250-257,300-306 1tui d1tuic1 C:221-226,234-244,250-257,300-306 1tui d1tuib1 B:221-226,234-244,250-257,300-306 2bvn d2bvna1 A:210-215,224-233,239-246,288-294 1ha3 d1ha3b1 B:221-226,234-244,250-257,300-306 1dar d1dara1 A:308-319,323-332,338-345,385-391 2c77 d2c77a1 A:221-226,234-244,249-257,300-306 1q7y d1q7yd_ D:37-49,159-167,196-207,305-314 1b23 d1b23p1 P:221-226,234-244,250-257,300-306 2b7c d2b7ca1 A:244-249,258-267,273-280,320-327 1tui d1tuia1 A:221-226,234-244,251-257,300-306 3cd6 d3cd6b1 B:35-47,159-169,197-210,305-314 1ob2 d1ob2a1 A:210-215,223-233,239-246,288-294 1zc8 d1zc8y1 Y:221-226,234-244,249-257,299-306 1ttt d1ttta1 A:221-226,234-244,249-257,299-306 1r5n d1r5na1 A:469-473,481-490,496-503,545-549 1kk0 d1kk0a1 A:209-218,231-240,247-253,308-314 1r5b d1r5ba1 A:469-473,481-490,495-503,545-549 1exm d1exma1 A:221-226,234-244,250-257,299-306 2vhm d2vhmd1 D:3-14,20-28,105-114,197-206 2bvn d2bvnb1 B:210-215,223-233,239-246,288-294 2rfk d2rfkc1 C:1-12,14-21,26-33,66-74 2pmd d2pmda1 A:213-222,235-244,250-257,312-319 2pmd d2pmdb1 B:213-222,235-244,250-257,312-319 1ttt d1tttb1 B:221-228,234-244,253-257,299-306 1efu d1efua1 A:210-215,223-233,239-246,288-294 2aho d2ahoa1 A:213-222,235-244,250-257,312-319 1efg d1efga1 A:309-319,323-332,337-345,386-391 1aip d1aipf1 F:221-226,235-244,251-257,299-306 1efc d1efcb1 B:210-214,223-233,239-246,290-294 2fx3 d2fx3a1 A:210-215,224-233,240-246,288-294 1d8t d1d8tb1 B:210-214,223-233,239-246,290-294 1efu d1efuc1 C:210-215,223-233,240-246,288-294 1dg1 d1dg1h1 H:210-214,223-233,238-246,290-294 1fnm d1fnma1 A:309-319,323-332,338-345,386-391 1d8t d1d8ta1 A:210-214,223-233,239-246,290-294 1dg1 d1dg1g1 G:210-214,223-233,239-246,290-294 2npf d2npfb1 B:377-390,393-402,408-415,465-472 1wb2 d1wb2a2 A:387-401,402-408,420-428,455-467 2bm0 d2bm0a1 A:309-319,323-332,338-345,385-391 1efc d1efca1 A:210-214,223-233,240-246,290-294 1wb3 d1wb3a2 A:387-401,402-408,420-428,455-467 2bm1 d2bm1a1 A:309-319,323-332,338-345,386-392 2p8y d2p8yt1 T:377-388,393-402,407-415,465-471 1g7t d1g7ta2 A:464-469,478-488,493-500,544-549 2p8z d2p8zt1 T:377-388,393-402,407-415,465-471 2p8w d2p8wt1 T:377-388,393-402,407-415,465-471 1wb2 d1wb2c2 C:387-399,404-408,422-427,455-466 1f60 d1f60a1 A:244-254,258-267,274-280,320-327 1wb1 d1wb1a2 A:387-401,402-408,420-428,455-467 1wb1 d1wb1c2 C:387-399,404-408,422-427,455-466 1ijf d1ijfa1 A:244-254,258-267,274-280,320-327 1u2r d1u2ra1 A:377-390,393-402,407-415,465-471 1xe1 d1xe1a_ A:26-32,39-49,54-61,99-107 1ije d1ijea1 A:244-254,258-267,274-280,320-327 1g7c d1g7ca1 A:244-254,258-267,274-280,320-327 2efg d2efga1 A:309-319,323-332,338-345,385-392 2p8x d2p8xt1 T:377-389,393-402,407-415,465-471 1ob5 d1ob5c1 C:221-225,235-244,249-257,302-306 1ob5 d1ob5e1 E:221-225,235-244,249-257,302-306 1ob5 d1ob5a1 A:221-225,235-244,249-257,302-306 1zm9 d1zm9c1 C:377-390,393-402,407-415,465-471 1n0u d1n0ua1 A:378-383,393-402,408-415,465-471 1zm9 d1zm9a1 A:377-390,393-402,407-415,465-471 1zm3 d1zm3c1 C:377-390,393-402,407-415,465-471 1zm2 d1zm2a1 A:377-390,393-402,407-415,465-471 2bv3 d2bv3a1 A:309-319,323-332,338-345,385-392 2j28 d2j28d1 D:4-13,21-28,105-117,197-206 2awb d2awbd1 D:4-13,21-28,105-117,197-206 2b7b d2b7ba1 A:244-254,258-267,274-280,320-327 1ktv d1ktvb1 B:309-319,323-332,338-345,386-392 1ktv d1ktva1 A:309-319,323-332,338-345,386-392 1zm4 d1zm4c1 C:377-390,393-402,407-415,465-471 2qmu d2qmua1 A:213-222,235-244,250-256,312-319 1zun d1zunb1 B:243-249,258-267,273-280,318-325 1n0v d1n0vd1 D:378-383,393-402,408-415,465-471 2npf d2npfa1 A:378-383,393-402,408-415,465-471 2c78 d2c78a1 A:221-232,234-244,250-257,300-306 2qn6 d2qn6a1 A:213-222,235-244,250-256,312-319 1eft d1efta1 A:221-232,234-244,250-257,300-306 2e1r d2e1ra1 A:378-389,393-402,407-415,465-471 1g7r d1g7ra2 A:464-470,478-488,495-500,542-549 1n0v d1n0vc1 C:377-383,393-402,408-415,465-471 1jny d1jnyb1 B:233-244,246-256,262-269,309-315 1zm9 d1zm9e1 E:377-383,393-402,407-415,465-471 1zm3 d1zm3e1 E:377-383,393-402,407-415,465-471 3cd6 d3cd6b1 B:35-47,65-76,197-210,305-314 1zm2 d1zm2e1 E:377-383,393-402,407-415,465-471 2vhn d2vhnd1 D:3-9,20-28,105-114,197-206 1zm3 d1zm3a1 A:377-383,393-402,407-415,465-471 2ogn d2ognb1 B:3-8,17-27,100-109,192-201 1skq d1skqb1 B:233-244,246-256,263-269,309-315 1zm2 d1zm2c1 C:377-383,393-402,407-415,465-471 1zm4 d1zm4e1 E:377-383,393-402,407-415,465-471 1zm4 d1zm4a1 A:377-383,393-402,407-415,465-471 1skq d1skqa1 A:233-244,246-256,263-269,309-315 3bbx d3bbxd1 D:2-9,21-28,106-114,199-206 2aw4 d2aw4d1 D:2-9,21-28,106-114,199-206 2rdo d2rdod1 D:2-9,21-28,106-114,199-206 2hgu d2hgue1 E:1-6,20-27,98-108,193-200 1n0v d1n0vd1 D:68-72,383-390,432-439,440-445 1vsa d1vsac1 C:3-7,18-39,98-113,192-201 1g7s d1g7sa2 A:464-470,478-488,494-500,542-549 1vs8 d1vs8d1 D:4-9,21-28,105-117,197-206 2v47 d2v47e1 E:3-7,22-28,98-109,192-199 2v49 d2v49e1 E:3-7,22-28,98-109,192-199 2ogo d2ogob1 B:3-8,17-27,99-109,194-201 2hgj d2hgje1 E:1-6,17-27,98-109,192-200 3cme d3cmeb1 B:39-46,65-76,196-207,305-314 2qa4 d2qa4b1 B:37-47,65-76,196-210,305-314 2hgq d2hgqe1 E:1-6,17-27,99-108,193-200 3dll d3dllb1 B:2-7,18-28,99-112,193-201 1vq6 d1vq6b1 B:36-49,65-76,196-210,305-314 2zjp d2zjpb1 B:2-7,18-28,98-112,192-201 1yj9 d1yj9b1 B:39-46,65-76,196-210,305-314 1nji d1njid_ D:39-46,63-76,196-210,305-314 1k73 d1k73d_ D:39-46,63-76,196-210,305-314 1m90 d1m90d_ D:39-46,63-76,196-210,305-314 1ffk d1ffkb_ B:39-46,63-75,195-209,305-314 1jj2 d1jj2b_ B:39-46,63-76,196-210,305-314 1vq9 d1vq9b1 B:39-46,63-76,196-210,305-314 1kc8 d1kc8d_ D:39-46,63-76,196-210,305-314 2zjq d2zjqb1 B:2-7,18-28,100-112,192-201 1kqs d1kqsb_ B:39-46,65-76,196-214,305-314 1yjn d1yjnb1 B:39-46,65-76,198-210,305-314 1vqo d1vqob1 B:39-46,65-76,198-210,305-314 3ccm d3ccmb1 B:39-46,65-76,196-210,305-314 3ccs d3ccsb1 B:39-46,65-76,196-210,305-314 1q82 d1q82d_ D:39-46,65-76,196-214,305-314 2otl d2otlb1 B:39-46,65-76,196-210,305-314 1vq8 d1vq8b1 B:39-46,65-76,196-210,305-314 3ccu d3ccub1 B:39-46,65-76,196-210,305-314 1yij d1yijb1 B:39-46,65-76,196-210,305-314 1m1k d1m1kd_ D:39-46,65-76,196-210,305-314 2qbc d2qbcd1 D:3-7,19-29,106-111,198-206 2qba d2qbad1 D:3-7,19-29,106-111,198-206 1qvg d1qvgb_ B:40-46,65-76,196-210,305-314 3cc7 d3cc7b1 B:39-46,65-76,196-210,305-314 1qvf d1qvfb_ B:39-46,65-76,196-210,305-314 3cce d3cceb1 B:39-46,65-76,196-210,305-314 1vqm d1vqmb1 B:39-46,65-76,196-210,305-314 2j03 d2j03e1 E:2-7,18-28,100-109,192-201 3cma d3cmab1 B:39-46,65-76,196-210,305-314 1yit d1yitb1 B:40-46,65-76,196-210,305-314 1yi2 d1yi2b1 B:39-46,65-76,196-210,305-314 3cc2 d3cc2b1 B:39-46,65-76,196-210,305-314 2qbi d2qbid1 D:3-7,19-29,106-111,198-206 1vql d1vqlb1 B:39-46,65-76,196-210,305-314 1q86 d1q86d_ D:39-46,65-76,196-210,305-314 3cpw d3cpwb1 B:39-46,65-76,196-210,305-314 1n8r d1n8rd_ D:39-46,65-76,196-210,305-314 3ccq d3ccqb1 B:39-46,65-76,196-210,305-314 1s72 d1s72b_ B:39-46,65-76,196-210,305-314 1k8a d1k8ad_ D:39-46,65-76,196-210,305-314 3ccl d3cclb1 B:39-46,65-76,196-210,305-314 2qbk d2qbkd1 D:3-7,19-29,106-111,198-206 2gya d2gyab1 B:3-10,20-29,104-113,199-206 1yjw d1yjwb1 B:39-46,65-76,196-210,305-314 1vq4 d1vq4b1 B:39-46,65-76,196-210,305-314 2qbe d2qbed1 D:3-7,19-29,106-117,197-206 3ccv d3ccvb1 B:39-46,65-76,196-210,305-314 1kd1 d1kd1d_ D:39-46,65-76,196-210,305-314 1vq5 d1vq5b1 B:39-46,65-76,196-210,305-314 2qbg d2qbgd1 D:3-7,19-29,106-117,197-206 1yhq d1yhqb1 B:39-46,65-76,196-210,305-314 1k9m d1k9md_ D:39-46,65-76,196-210,305-314 2zjr d2zjrb1 B:2-7,18-28,98-112,192-201 2otj d2otjb1 B:39-46,65-76,196-210,305-314 2i2t d2i2td1 D:3-7,19-29,106-111,198-206 1q81 d1q81d_ D:39-46,65-76,196-210,305-314 2i2v d2i2vd1 D:3-7,19-29,106-111,198-206 2gyc d2gycb1 B:3-10,20-29,104-113,199-206 1vq7 d1vq7b1 B:39-46,65-76,196-210,305-314 2z4l d2z4ld1 D:3-7,19-29,106-111,198-206 2z4n d2z4nd1 D:3-7,19-29,106-111,198-206 3d5b d3d5be1 E:2-7,18-28,98-115,192-201 3d5d d3d5de1 E:2-7,18-28,98-115,192-201 1vqk d1vqkb1 B:39-46,65-76,196-210,307-314 2qao d2qaod1 D:3-7,19-29,106-111,198-206 2qam d2qamd1 D:3-7,19-29,106-111,198-206 3df4 d3df4d1 D:3-7,19-29,106-111,198-206 3df2 d3df2d1 D:3-7,19-29,106-111,198-206 2j01 d2j01e1 E:3-7,18-28,100-109,192-201 3cf5 d3cf5b1 B:2-7,18-28,100-115,192-201 2qoz d2qozd1 D:3-7,19-29,106-111,198-206 1vsp d1vspc1 C:4-8,18-28,98-108,194-201 3cc4 d3cc4b1 B:39-47,65-76,196-210,305-314 2qp1 d2qp1d1 D:3-7,19-29,106-111,198-206 3ccr d3ccrb1 B:40-47,65-76,196-210,305-314 2qex d2qexb1 B:40-49,65-76,196-210,305-314 55. b.55.1 PH domain-like PH domain-like barrel barrel, partly opened; n*=6, S*=12; meander; capped by an alpha-helix 1wjm d1wjma_ A:13-22,30-34,83-90,92-99 1qc6 d1qc6b_ B:2010-2018,2021-2026,2077-2084,2085-2093 1evh d1evha_ A:10-19,20-26,76-83,84-92 2iyb d2iybb1 B:7-19,20-26,76-83,84-92 2iyb d2iybd1 D:10-19,20-26,76-83,84-92 1egx d1egxa_ A:10-19,20-26,78-85,86-94 2iyb d2iyba1 A:7-19,20-26,76-83,84-92 2iyb d2iybc1 C:7-19,20-26,76-82,85-92 2r0d d2r0db2 B:270-276,279-283,325-331,357-362 2r09 d2r09b2 B:270-276,279-283,325-331,357-362 2cy5 d2cy5a1 A:37-46,73-82,118-125,132-140 1k5d d1k5dk_ K:52-59,66-80,118-125,133-142 1k5d d1k5dh_ H:52-59,66-80,118-125,133-142 1k5d d1k5db_ B:52-59,66-80,118-125,133-142 1k5d d1k5de_ E:52-59,66-80,118-125,133-142 2aeh d2aeha2 A:255-264,266-275,312-321,326-333 2al6 d2al6b2 B:255-264,266-275,312-321,326-333 1u29 d1u29a1 A:261-272,274-286,321-327,353-358 1x11 d1x11a_ A:333-344,385-393,424-431,456-465 1oy2 d1oy2a_ A:53-64,109-114,163-169,175-182 1ddw d1ddwa_ A:10-17,23-27,73-81,82-90 1u2b d1u2ba1 A:265-277,279-291,326-332,358-363 1mai d1maia_ A:25-33,35-45,95-102,107-112 2gcj d2gcjd1 D:383-389,390-399,433-442,446-455 2al6 d2al6a2 A:255-264,266-275,313-321,326-332 1n3h d1n3ha_ A:53-63,109-114,163-169,175-183 2rnr d2rnrb1 B:7-18,19-28,63-70,72-80 2gcl d2gcla1 A:383-389,390-399,433-442,446-455 2r09 d2r09a2 A:266-276,279-290,325-331,357-362 1aqc d1aqca_ A:333-344,385-393,424-431,456-465 2gcl d2gclb1 B:383-389,390-399,433-442,446-455 1qc6 d1qc6a_ A:1007-1018,1021-1026,1077-1084,1085-1093 2gcj d2gcja1 A:383-389,390-399,433-442,446-455 1ddm d1ddma_ A:81-93,114-118,158-167,170-180 2gcj d2gcjc1 C:383-389,390-399,433-442,446-455 2roz d2rozb1 B:19-28,53-62,95-103,107-115 2fju d2fjub3 B:20-27,32-41,98-105,109-118 1u27 d1u27a1 A:261-272,274-286,321-327,353-358 2gcj d2gcjb1 B:383-389,390-399,433-442,446-455 1wgu d1wgua_ A:19-28,53-62,95-104,106-115 2zkm d2zkmx3 X:20-29,30-41,98-105,109-118 1x05 d1x05a1 A:16-27,34-44,86-93,95-102 1dro d1droa_ A:13-19,32-40,86-92,94-101 1p3r d1p3ra_ A:51-60,90-99,132-141,142-152 1p3r d1p3rb_ B:51-60,90-99,132-141,142-152 1fgz d1fgza_ A:265-277,278-283,325-331,357-362 1p3r d1p3rc_ C:51-60,90-99,132-141,142-152 1fgy d1fgya_ A:265-277,278-283,325-331,357-362 1nu2 d1nu2a_ A:43-52,82-90,124-133,134-144 1ntv d1ntva_ A:43-52,82-90,124-133,134-144 1wi1 d1wi1a_ A:13-19,25-36,76-84,85-93 2uvm d2uvma1 A:4-16,21-32,71-80,81-90 1q67 d1q67a_ A:42-51,54-58,189-196,199-206 1bwn d1bwna_ A:4-14,24-33,99-107,108-116 1v89 d1v89a_ A:8-18,23-33,71-78,89-94 1u5f d1u5fa1 A:116-127,136-146,185-192,194-201 1bwn d1bwnb_ B:4-14,24-33,99-107,108-116 1oqn d1oqna_ A:1043-1052,1082-1090,1124-1133,1134-1144 1m7e d1m7ea_ A:51-60,90-98,132-141,142-152 1m7e d1m7ec_ C:51-60,90-98,132-141,142-152 2z0p d2z0pd1 D:4-14,24-33,99-107,108-116 1m7e d1m7eb_ B:51-60,90-98,132-141,142-152 1oqn d1oqnb_ B:1043-1052,1082-1090,1124-1133,1134-1144 2i5f d2i5fa1 A:245-257,258-270,313-320,322-329 1b55 d1b55b_ B:4-14,24-33,99-107,108-116 1b55 d1b55a_ A:4-14,24-33,99-107,108-116 2coa d2coaa1 A:8-19,21-33,76-82,83-90 1btk d1btka_ A:4-14,24-33,99-107,108-116 1u5d d1u5da1 A:107-120,125-137,176-182,186-192 1btk d1btkb_ B:4-14,24-33,99-107,108-116 1zvr d1zvra1 A:90-96,98-109,149-156,158-165 1tj6 d1tj6a1 A:9-24,25-31,85-92,93-100 1eaz d1eaza_ A:192-204,205-217,256-263,264-271 2z0p d2z0pa1 A:4-14,24-33,99-107,108-116 1zc3 d1zc3b1 B:173-186,187-200,240-246,249-255 1unp d1unpa_ A:4-16,21-32,71-80,81-90 2r0d d2r0da2 A:266-276,279-283,325-331,357-362 2cay d2cayb1 B:28-35,43-51,87-95,255-261 1m7r d1m7ra1 A:90-96,98-109,149-156,158-165 1xod d1xodb1 B:9-24,25-31,85-92,93-100 1zc3 d1zc3d1 D:173-186,187-200,240-246,249-255 2nmb d2nmba_ A:84-93,115-125,158-166,171-180 1zc4 d1zc4b1 B:173-186,187-200,240-246,249-255 1zsq d1zsqa1 A:90-96,98-109,149-156,158-165 1lw3 d1lw3a1 A:90-96,98-109,149-156,158-165 1fhw d1fhwb_ B:266-275,280-290,325-331,357-362 1shc d1shca_ A:53-58,118-128,163-169,175-182 2z0p d2z0pb1 B:4-14,24-33,99-107,108-116 1zc4 d1zc4d1 D:173-186,187-200,240-246,249-255 2z0p d2z0pc1 C:4-14,24-33,99-107,108-116 1q67 d1q67b_ B:37-52,53-58,189-196,199-206 1upr d1upra_ A:1055-1065,1071-1081,1119-1125,1130-1135 2cay d2caya1 A:28-35,43-51,87-95,255-261 1fhw d1fhwa_ A:267-275,280-290,325-331,357-362 1ddv d1ddva_ A:6-17,23-27,73-80,83-90 1unr d1unra_ A:13-17,20-31,71-80,81-90 1fhx d1fhxb_ B:266-275,280-290,325-331,357-362 1xx0 d1xx0a1 A:243-255,260-271,313-320,322-329 1qqg d1qqgb2 B:161-169,181-189,219-227,232-240 1awe d1awea_ A:43-54,55-65,112-119,121-128 2j59 d2j59n1 N:936-943,957-966,1006-1013,1014-1021 1h10 d1h10a_ A:5-17,20-31,71-80,81-90 1unq d1unqa_ A:5-17,20-31,71-80,81-90 2j59 d2j59p1 P:936-943,957-966,1006-1013,1014-1021 1ddm d1ddma_ A:81-93,118-125,158-167,170-180 1zm0 d1zm0a1 A:247-257,258-271,313-320,322-329 1upq d1upqa_ A:55-65,71-81,119-125,130-135 1u5g d1u5gd1 D:116-127,136-146,185-191,196-201 2cof d2cofa1 A:13-19,20-31,66-74,75-83 2j59 d2j59m1 M:936-943,957-966,1006-1013,1014-1021 1n3h d1n3ha_ A:53-63,118-128,163-169,175-183 1irs d1irsa_ A:160-169,181-189,219-227,232-240 1qqg d1qqga2 A:161-169,181-189,219-227,232-240 2j59 d2j59r1 R:936-943,957-966,1006-1013,1014-1021 1m7r d1m7rb1 B:90-95,99-109,149-156,158-165 2j59 d2j59o1 O:936-943,957-966,1006-1013,1014-1021 2crf d2crfa1 A:30-40,44-52,99-109,110-120 2cy4 d2cy4a1 A:32-41,73-82,118-125,132-139 1u5g d1u5gc1 C:116-127,136-146,185-191,196-201 1x86 d1x86g2 G:1019-1028,1037-1044,1095-1101,1108-1114 1u5g d1u5gb1 B:116-127,136-146,185-191,196-201 1pfj d1pfja_ A:7-18,19-28,63-70,72-79 1xcg d1xcge2 E:965-976,980-990,1041-1048,1054-1061 1u5g d1u5ga1 A:116-127,136-146,185-191,196-201 2j59 d2j59q1 Q:936-943,957-966,1006-1013,1014-1021 2i5c d2i5cb1 B:245-255,260-270,313-320,322-329 1zm0 d1zm0b1 B:252-256,259-271,313-320,322-329 2fjl d2fjla1 A:2-12,15-26,111-118,124-130 1mk9 d1mk9d2 D:310-318,325-333,364-370,377-382 1u5d d1u5dc1 C:107-120,125-137,176-182,186-192 1mk9 d1mk9b2 B:310-318,325-333,364-370,377-382 1u5d d1u5dd1 D:115-119,126-137,176-182,187-192 1pls d1plsa_ A:11-15,20-29,67-74,76-83 1xod d1xoda1 A:11-22,27-31,85-92,93-100 1bak d1baka_ A:558-569,577-585,616-625,627-634 1qc6 d1qc6a_ A:1007-1018,1033-1043,1077-1084,1085-1093 1mk9 d1mk9h2 H:310-318,325-333,364-370,377-382 1q67 d1q67a_ A:42-51,61-71,189-196,199-206 2dyn d2dyna_ A:11-21,30-39,75-83,94-100 2iyb d2iybb1 B:7-19,32-42,76-83,84-92 1mke d1mkea1 A:44-55,57-74,108-115,116-124 1dbh d1dbha2 A:443-453,458-465,512-518,522-528 1xd4 d1xd4a3 A:443-453,458-465,512-518,522-528 1xdv d1xdvb3 B:443-453,458-465,512-518,522-528 1xd4 d1xd4b3 B:443-453,458-465,512-518,522-528 1xdv d1xdva3 A:443-453,458-465,512-518,522-528 1sgh d1sgha2 A:203-211,213-222,253-260,266-271 2g35 d2g35a1 A:6-14,21-30,60-66,73-78 1x86 d1x86e2 E:1019-1030,1035-1044,1095-1101,1108-1114 1x86 d1x86a2 A:1019-1031,1034-1044,1095-1104,1105-1114 1uef d1uefa_ A:5-13,25-33,67-75,80-88 2coc d2coca1 A:8-19,21-31,73-80,81-88 1mk9 d1mk9f2 F:310-318,325-333,364-370,377-382 2iyb d2iyba1 A:7-19,32-42,76-83,84-92 1fao d1faoa_ A:166-176,179-190,226-233,234-241 1ym7 d1ym7b2 B:559-568,576-585,616-625,627-634 1mk7 d1mk7b2 B:310-318,325-334,364-370,377-383 1fhx d1fhxa_ A:265-276,279-283,325-331,357-362 1mix d1mixa2 A:310-318,325-333,364-370,377-382 1y19 d1y19b2 B:310-318,325-334,364-370,377-382 1isn d1isna2 A:219-227,229-238,269-276,281-287 1ym7 d1ym7d2 D:559-568,576-585,616-625,627-634 1y19 d1y19d2 D:310-318,325-334,364-370,377-382 1miz d1mizb2 B:310-318,325-333,364-370,377-382 1rj2 d1rj2g2 G:832-842,858-867,911-918,921-928 1mph d1mpha_ A:1-13,23-32,73-81,83-90 1fgz d1fgza_ A:265-277,283-290,325-331,357-362 2emt d2emtb2 B:203-211,213-222,253-260,265-271 1y19 d1y19h2 H:310-318,325-334,364-370,377-382 1fhx d1fhxa_ A:265-276,283-290,325-331,357-362 1ym7 d1ym7a2 A:559-568,576-585,616-625,627-634 1ym7 d1ym7c2 C:559-568,576-585,616-625,627-634 1t77 d1t77a2 A:2078-2089,2090-2101,2148-2158,2160-2167 1x86 d1x86c2 C:1019-1030,1034-1044,1095-1104,1105-1114 1rrp d1rrpd_ D:40-53,54-72,108-113,122-131 2hth d2hthb1 B:23-29,35-44,79-87,104-111 1rrp d1rrpb_ B:40-53,54-72,108-113,122-131 1k5g d1k5gk_ K:48-59,66-81,118-125,133-142 1k5g d1k5gh_ H:48-59,66-81,118-125,133-142 1k5g d1k5gb_ B:48-59,66-81,118-125,133-142 1pms d1pmsa_ A:460-470,475-482,530-536,538-545 1t77 d1t77b2 B:2078-2089,2090-2101,2148-2158,2160-2167 1xr0 d1xr0b_ B:19-27,31-42,70-76,85-91 1k5g d1k5ge_ E:48-59,66-81,118-125,133-142 1y19 d1y19f2 F:310-318,325-334,364-370,377-382 1y19 d1y19j2 J:310-318,325-334,364-370,377-382 2emt d2emta2 A:203-210,214-222,253-260,266-271 1fgy d1fgya_ A:265-277,283-290,325-331,357-362 1mk7 d1mk7d2 D:310-318,325-334,364-370,377-383 1t77 d1t77c2 C:2078-2089,2090-2101,2148-2158,2160-2167 1oy2 d1oy2a_ A:53-64,118-128,163-169,175-182 1x1g d1x1ga1 A:16-27,34-44,91-97,99-106 1p5t d1p5tb_ B:5-13,25-33,67-75,80-88 1nty d1ntya2 A:1426-1437,1445-1454,1494-1501,1509-1514 1dyn d1dynb_ B:12-21,31-38,75-83,94-100 1t77 d1t77d2 D:2078-2089,2090-2101,2148-2158,2160-2167 1u5e d1u5ea1 A:122-127,137-146,185-192,194-201 2otx d2otxa1 A:122-127,137-146,185-192,194-201 1dyn d1dyna_ A:12-21,30-38,75-83,94-100 1p6s d1p6sa_ A:4-16,21-32,71-75,86-91 2r0d d2r0da2 A:266-276,283-290,325-331,357-362 1tj6 d1tj6b1 B:10-22,27-31,85-92,93-100 1p5t d1p5ta_ A:5-13,25-33,67-75,80-88 1v88 d1v88a_ A:7-19,21-32,67-73,100-106 2iyb d2iybc1 C:7-19,32-42,76-82,85-92 2yvc d2yvca2 A:203-211,213-222,253-260,266-271 1u5d d1u5db1 B:107-119,125-137,176-182,186-192 2dfk d2dfka2 A:271-277,282-291,337-344,348-354 2k00 d2k00a1 A:311-318,325-333,364-370,377-382 1uef d1uefb_ B:5-13,25-33,67-75,80-88 2aeh d2aehb2 B:255-263,267-275,312-321,326-333 1omw d1omwa2 A:559-568,576-585,616-625,627-634 1fb8 d1fb8a_ A:166-175,180-190,226-233,234-241 2ems d2emsa2 A:203-211,213-222,253-260,266-271 2j0m d2j0ma2 A:255-263,267-275,312-321,326-333 2k2u d2k2ua1 A:3-10,11-20,58-65,85-92 1e5w d1e5wa2 A:203-211,213-222,253-260,266-271 1tj6 d1tj6a1 A:9-24,36-44,85-92,93-100 1y19 d1y19l2 L:310-318,325-334,364-370,377-383 2otx d2otxb1 B:122-127,137-146,185-192,194-201 1u5e d1u5eb1 B:122-127,137-146,185-192,194-201 1xod d1xodb1 B:9-24,36-44,85-92,93-100 2yvc d2yvcc2 C:203-211,213-222,253-260,266-271 2dyn d2dynb_ B:12-21,32-38,75-83,94-100 1j19 d1j19a2 A:203-211,213-222,253-260,266-271 1qqg d1qqga1 A:12-23,24-36,79-89,90-97 2adz d2adza1 A:7-17,25-36,142-150,151-159 1xcg d1xcga2 A:965-976,980-990,1041-1048,1055-1061 1txd d1txda2 A:1019-1030,1034-1044,1096-1104,1105-1114 1kzg d1kzgc2 C:1832-1844,1858-1867,1911-1918,1921-1928 1h4r d1h4ra2 A:219-227,229-238,269-276,282-287 1kz7 d1kz7c2 C:1832-1844,1858-1867,1911-1918,1921-1928 1fho d1fhoa_ A:17-21,23-34,71-78,84-89 1lb1 d1lb1g2 G:832-844,858-867,911-918,921-928 1rj2 d1rj2d2 D:832-844,858-867,911-918,921-928 1lb1 d1lb1c2 C:832-844,858-867,911-918,921-928 1w1h d1w1hb_ B:456-468,469-480,512-519,520-527 1lb1 d1lb1e2 E:832-844,858-867,911-918,921-928 1mi1 d1mi1a2 A:2141-2153,2154-2165,2212-2222,2224-2231 1kzg d1kzga2 A:832-844,858-867,911-918,921-928 1h4r d1h4rb2 B:219-227,229-238,269-276,282-287 1tj6 d1tj6b1 B:10-22,36-44,85-92,93-100 2cod d2coda1 A:9-17,25-34,66-73,75-81 1rj2 d1rj2a2 A:832-844,858-867,911-918,921-928 1mi1 d1mi1b2 B:2141-2153,2154-2165,2212-2222,2224-2231 1qqg d1qqgb1 B:12-23,24-36,79-89,90-97 1gc7 d1gc7a2 A:203-211,213-222,253-260,266-271 1w1g d1w1ga_ A:456-468,469-480,512-519,520-527 2i5c d2i5cc1 C:245-256,259-270,313-320,322-329 1lb1 d1lb1a2 A:832-844,858-867,911-918,921-928 2i5c d2i5ca1 A:245-256,259-270,313-320,322-329 1ef1 d1ef1b2 B:203-211,213-222,253-260,266-271 1kz7 d1kz7a2 A:832-844,858-867,911-918,921-928 1w1h d1w1hd_ D:456-468,469-480,512-519,520-527 1ef1 d1ef1a2 A:203-211,213-222,253-260,266-271 1gc6 d1gc6a2 A:203-211,213-222,253-260,266-271 1xke d1xkea1 A:10-22,25-41,79-88,94-101 1w1h d1w1ha_ A:456-468,469-480,512-519,520-527 2yvc d2yvcb2 B:203-211,213-222,253-260,266-271 1x1f d1x1fa1 A:23-28,34-43,80-87,88-95 1v5u d1v5ua_ A:9-18,23-34,78-85,86-94 2d10 d2d10b2 B:203-211,213-222,253-260,266-271 1foe d1foec2 C:1266-1276,1288-1297,1354-1365,1366-1377 1foe d1foea2 A:1266-1276,1288-1297,1354-1365,1366-1377 1foe d1foee2 E:1266-1276,1288-1297,1354-1365,1366-1377 2d10 d2d10d2 D:203-211,213-222,253-260,266-271 1foe d1foeg2 G:1266-1276,1288-1297,1354-1365,1366-1377 2gcj d2gcjb1 B:242-252,254-263,294-303,314-322 2gcj d2gcjc1 C:242-252,254-263,294-303,314-322 2d2q d2d2qb2 B:203-211,213-222,253-260,266-271 2d11 d2d11b2 B:203-211,213-222,253-260,266-271 2gs0 d2gs0a1 A:3-10,11-20,58-65,84-91 2d11 d2d11a2 A:203-211,213-222,253-260,266-271 1xod d1xoda1 A:11-22,36-43,85-92,93-100 2d11 d2d11c2 C:203-211,213-222,253-260,266-271 1w1h d1w1hc_ C:456-468,469-480,512-519,520-527 1v5p d1v5pa_ A:16-25,31-41,87-94,95-102 2gcj d2gcjd1 D:242-252,254-263,294-303,314-322 2gcl d2gcla1 A:242-252,254-263,294-303,314-322 1ni2 d1ni2a2 A:203-211,213-222,253-260,266-271 2gcj d2gcja1 A:242-252,254-263,294-303,314-322 1wjm d1wjma_ A:13-22,34-41,83-90,92-99 1gg3 d1gg3c2 C:189-197,199-208,236-243,251-258 2d10 d2d10a2 A:203-211,213-222,253-260,266-271 2zpy d2zpya2 A:203-211,213-222,253-260,266-271 2d10 d2d10c2 C:203-211,213-222,253-260,266-271 1gg3 d1gg3a2 A:189-197,199-208,236-244,250-258 1j0w d1j0wa_ A:12-18,27-35,66-75,79-87 2d2q d2d2qa2 A:203-211,213-222,253-260,266-271 1shc d1shca_ A:59-64,109-114,163-169,175-182 1gg3 d1gg3b2 B:189-197,199-207,236-244,250-258 2gcl d2gclb1 B:242-252,254-263,294-303,314-322 2d11 d2d11d2 D:203-211,213-222,253-260,266-271 2dx5 d2dx5a1 A:23-28,35-44,81-86,105-112 1j0w d1j0wb_ B:12-18,27-35,66-74,79-87 1v5m d1v5ma_ A:17-29,42-54,96-103,105-112 1wg7 d1wg7a_ A:20-28,40-51,90-97,99-106 1egx d1egxa_ A:10-19,33-43,78-85,86-94 1y5o d1y5oa1 A:3-10,11-20,58-66,83-91 1wgq d1wgqa_ A:10-18,24-33,69-76,77-85 1i2h d1i2ha_ A:1010-1017,1031-1041,1073-1080,1083-1090 2dkq d2dkqa1 A:24-32,56-64,109-117,123-131 1btn d1btna_ A:6-13,23-32,74-81,83-90 1wvh d1wvha1 A:1611-1620,1643-1652,1697-1704,1710-1720 1wj1 d1wj1a_ A:31-38,61-70,103-111,116-125 1i7a d1i7ad_ D:5-16,31-40,73-81,82-90 1x11 d1x11b_ B:335-343,385-393,424-431,457-465 2r0d d2r0db2 B:270-276,283-290,325-331,357-362 1qc6 d1qc6b_ B:2010-2018,2033-2043,2077-2084,2085-2093 2r09 d2r09b2 B:270-276,283-290,325-331,357-362 1ddw d1ddwa_ A:10-17,31-41,73-81,82-90 1i7a d1i7ac_ C:5-16,31-41,73-81,82-90 1evh d1evha_ A:10-19,32-42,76-83,84-92 2iyb d2iybd1 D:10-19,32-42,76-83,84-92 1tqz d1tqza1 A:16-21,41-53,91-99,101-109 2bcj d2bcja2 A:559-569,574-578,616-625,627-634 56. d.109.3 FLJ32549 C-terminal domain-like alpha-beta(2)-alpha-beta(3)-alpha; similar to the Roadblock/LC7 domain Gelsolin-like 3 layers: a/b/a; contains mixed beta-sheet 2gnx d2gnxa2 A:310-318,346-352,389-398,401-410 58. e.58.1 Viral ssDNA binding protein Viral ssDNA binding protein 2 domains; d1: [large alpha+beta domain subdivided into the 'head', 'neck' and 'shoulders' regions; in the 'neck', there is an OB-fold interrupted by large insertions]; d2: [all-alpha, 6 helices; orthogonal array] 1urj d1urjb_ B:18-26,154-163,180-187,188-199 1urj d1urja_ A:18-26,154-163,180-187,188-199 59. b.49.3 Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like barrel, closed; n=6, S=8; greek-key 1ylo d1yloe1 E:66-75,77-85,93-102,142-149 1ylo d1yloc1 C:66-75,77-85,93-102,142-149 1ylo d1yloa1 A:66-75,77-85,93-102,142-149 1ylo d1ylod1 D:66-75,77-85,93-102,142-149 1ylo d1ylof1 F:66-75,77-85,93-102,142-149 1ylo d1ylob1 B:66-75,77-85,93-102,142-149 2gre d2gren1 N:73-82,84-92,100-109,162-169 2gre d2greb1 B:73-82,84-92,100-109,162-169 2gre d2grea1 A:73-82,84-92,100-109,162-169 1vhe d1vhea1 A:72-81,83-91,100-108,157-164 2gre d2grek1 K:73-82,84-92,101-109,162-169 2gre d2gref1 F:73-82,84-92,101-109,162-169 2gre d2greh1 H:73-82,84-92,100-109,162-169 2gre d2greg1 G:73-82,84-92,101-109,162-169 2gre d2grej1 J:73-82,84-92,100-109,164-169 2gre d2gred1 D:73-82,84-92,100-109,164-169 2gre d2grel1 L:73-82,84-92,100-109,164-169 2gre d2grei1 I:73-82,84-92,100-109,164-169 2gre d2grec1 C:73-82,84-92,100-109,164-169 2gre d2grem1 M:73-82,84-92,101-109,164-169 2gre d2greo1 O:73-82,84-92,100-109,164-169 2gre d2gree1 E:73-82,84-92,100-109,164-169 1y0y d1y0ya1 A:72-81,83-91,99-107,160-165 1y0r d1y0ra1 A:72-81,83-91,99-107,160-165 2gre d2grep1 P:73-82,84-92,101-109,164-169 1xfo d1xfob1 B:72-81,83-91,99-107,160-165 1xfo d1xfoc1 C:72-81,83-91,99-107,160-165 1xfo d1xfoa1 A:72-81,83-91,99-107,160-165 1y7e d1y7ea1 A:99-104,113-123,133-144,229-236 1xfo d1xfod1 D:72-81,83-91,99-107,158-165 1vho d1vhoa1 A:70-78,79-86,97-104,149-154 2fvg d2fvga1 A:64-73,75-83,91-98,143-150 60. b.61.4 Quinohemoprotein amine dehydrogenase A chain, domain 3 Streptavidin-like barrel, closed; n=8, S=10; meander 1jmz d1jmza5 A:181-191,193-205,258-267,272-281 1jmx d1jmxa5 A:181-191,193-205,258-267,272-281 1jju d1jjua5 A:174-184,186-199,249-258,263-272 1pby d1pbya5 A:174-184,186-199,249-258,263-272 61. b.61.2 beta-Barrel protease inhibitors Streptavidin-like barrel, closed; n=8, S=10; meander 1smp d1smpi_ I:13-20,21-30,83-90,92-100 1jiw d1jiwi_ I:12-20,24-32,87-94,96-104 1pxv d1pxvd_ D:28-35,36-45,85-94,102-108 1qwx d1qwxa_ A:28-35,36-45,85-93,102-108 1nyc d1nycb_ B:28-35,36-45,85-94,102-108 1nyc d1nyca_ A:29-35,36-45,85-94,99-108 1pxv d1pxvc_ C:28-35,36-45,85-94,99-108 1y4h d1y4hc1 C:28-35,36-45,85-94,98-108 1qwx d1qwxb_ B:28-35,36-45,85-94,99-108 1y4h d1y4hd1 D:28-35,36-45,85-94,98-108 62. d.26.2 Colicin E3 immunity protein FKBP-like core: beta(2)-alpha-beta(2); antiparallel beta-sheet 1jch d1jchb_ B:1-11,14-26,46-50,70-80 1jch d1jchd_ D:1-11,14-26,46-50,70-80 1e44 d1e44a_ A:1-12,13-26,46-50,71-80 2b5u d2b5ud1 D:1-12,13-26,46-50,70-80 2b5u d2b5ub1 B:1-12,13-26,46-50,70-80 63. d.58.7 RNA-binding domain, RBD Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 2o3d d2o3da1 A:122-127,156-163,176-183,185-195 2cpy d2cpya1 A:544-550,586-592,605-610,611-620 1no8 d1no8a_ A:105-111,146-153,166-171,172-181 1p1t d1p1ta_ A:17-22,58-64,78-82,85-92 2cpz d2cpza1 A:401-407,443-449,463-468,469-477 1dz5 d1dz5b_ B:10-15,52-58,72-77,78-86 1dz5 d1dz5a_ A:10-15,52-58,72-77,78-86 1uw4 d1uw4c_ C:51-60,93-102,115-122,124-134 1uw4 d1uw4a_ A:51-60,93-102,115-122,124-134 2cqc d2cqca1 A:119-124,160-166,180-185,186-193 1u6f d1u6fa1 A:43-49,86-92,105-110,111-119 2cq2 d2cq2a1 A:43-49,81-88,102-108,110-120 3beg d3begb1 B:122-128,156-163,176-183,185-195 2ghp d2ghpf2 F:41-50,79-88,100-105,106-114 2ghp d2ghpe2 E:41-50,79-88,100-105,106-114 1whw d1whwa_ A:38-44,80-87,101-105,106-114 2mst d2msta_ A:110-115,151-158,171-175,176-184 2ghp d2ghpc2 C:41-50,79-88,100-105,106-114 1sjr d1sjra_ A:45-53,83-92,105-109,114-121 1x4c d1x4ca1 A:16-22,51-58,71-78,80-90 2cqg d2cqga1 A:106-110,146-153,165-169,170-177 2ghp d2ghpg2 G:41-50,79-88,100-105,106-114 1x5p d1x5pa1 A:16-22,49-57,70-75,76-84 2cq4 d2cq4a1 A:151-156,192-199,211-216,217-224 1fnx d1fnxh1 H:39-45,81-87,101-106,107-115 2ghp d2ghpb2 B:41-50,79-88,101-105,106-114 2ghp d2ghph2 H:41-50,79-88,100-105,106-114 2ghp d2ghpd2 D:41-50,79-88,100-105,106-114 2f9j d2f9ja1 A:19-25,58-65,78-83,84-92 3sxl d3sxlb1 B:125-131,167-174,187-192,193-201 3sxl d3sxla1 A:125-131,167-174,187-192,193-201 3sxl d3sxlc1 C:125-131,167-174,187-192,193-201 1d8z d1d8za_ A:4-10,46-53,66-71,72-80 2f9d d2f9da1 A:19-25,58-65,78-83,84-92 2nz4 d2nz4d1 D:10-16,53-60,73-78,79-87 2cqi d2cqia1 A:9-15,49-56,69-74,75-83 1b7f d1b7fb1 B:125-131,167-174,187-192,193-201 1wwh d1wwhc1 C:173-179,208-215,227-232,234-242 1fxl d1fxla1 A:39-45,81-88,101-106,107-115 1wg4 d1wg4a_ A:16-22,51-58,71-78,80-89 1wi6 d1wi6a1 A:67-73,102-109,122-127,128-136 1cvj d1cvjc2 C:99-105,139-146,159-164,165-173 1b7f d1b7fa1 A:125-131,167-174,187-192,193-201 1g2e d1g2ea1 A:39-45,81-88,101-106,107-115 1wwh d1wwhb1 B:173-179,208-215,227-232,234-242 1h2t d1h2tz_ Z:40-46,82-89,103-107,108-116 1fje d1fjeb2 B:100-106,137-143,157-162,163-171 1wwh d1wwhd1 D:173-179,208-215,227-232,234-242 2nz4 d2nz4b1 B:10-16,53-60,73-78,79-87 2cpx d2cpxa1 A:309-315,351-357,372-376,377-385 1h2u d1h2uy_ Y:40-46,82-89,102-107,108-116 1cvj d1cvje1 E:11-17,53-60,73-78,79-87 1n54 d1n54b_ B:40-46,82-89,103-107,108-116 2f9j d2f9jb1 B:19-25,58-65,79-83,84-92 1cvj d1cvjg1 G:11-17,53-60,73-78,79-87 1wf0 d1wf0a_ A:6-12,43-50,59-66,67-74 2ghp d2ghpa2 A:41-49,80-88,100-105,106-114 2f9d d2f9db1 B:19-25,58-65,79-83,84-92 3cul d3culb1 B:405-411,448-455,468-473,474-482 1wf1 d1wf1a_ A:28-34,63-69,84-88,89-97 1wg1 d1wg1a_ A:95-101,129-137,150-155,156-164 1a9n d1a9nb_ B:10-16,53-60,73-78,79-87 2ghp d2ghpf1 F:117-123,160-165,179-184,185-193 1m5v d1m5vc_ C:10-16,53-60,73-78,79-87 2ghp d2ghpb1 B:117-123,160-165,179-184,185-193 3cun d3cunb1 B:405-411,448-455,469-473,474-482 1h2u d1h2ux_ X:40-46,82-89,102-107,108-116 1cvj d1cvjh1 H:11-17,53-60,73-78,79-87 1a9n d1a9nd_ D:10-16,53-60,73-78,79-87 2ghp d2ghpe3 E:210-216,254-261,273-278,279-287 1vc5 d1vc5a_ A:10-16,53-60,74-78,79-87 1x5u d1x5ua1 A:16-22,58-65,78-83,84-92 1n52 d1n52b_ B:40-46,82-89,103-107,108-116 2cpd d2cpda1 A:231-237,267-274,287-292,293-301 3cul d3cula1 A:305-311,348-355,368-373,374-382 3cun d3cuna1 A:305-311,348-355,368-373,374-382 2ghp d2ghpa3 A:210-216,254-261,273-278,279-287 2ghp d2ghph3 H:210-216,254-261,273-278,279-287 2cqb d2cqba1 A:6-12,48-55,68-73,74-82 2ghp d2ghpf3 F:210-216,254-261,273-278,279-287 1x5t d1x5ta1 A:6-12,49-56,69-74,75-83 1nu4 d1nu4b_ B:10-16,53-60,73-78,79-87 1vc6 d1vc6a_ A:10-16,53-60,74-78,79-87 2ghp d2ghpd3 D:210-216,254-261,273-278,279-287 1nu4 d1nu4a_ A:10-16,53-60,73-78,79-87 2mss d2mssa_ A:110-115,150-156,170-175,176-184 1cvj d1cvjd1 D:11-17,53-60,73-78,79-87 1x4a d1x4aa1 A:23-29,62-69,82-87,88-95 1vby d1vbya_ A:10-16,53-60,74-78,79-87 1sj4 d1sj4p_ P:10-16,53-60,74-78,79-87 2nz4 d2nz4a1 A:10-16,53-60,74-78,79-87 1vbz d1vbza_ A:10-16,53-60,74-78,79-87 2cqd d2cqda1 A:11-17,53-60,72-77,78-86 2k3k d2k3ka1 A:7-13,50-57,70-75,76-84 1urn d1urnc_ C:10-16,53-60,73-78,79-87 2ghp d2ghpd1 D:117-123,160-166,179-184,185-193 2ghp d2ghpe1 E:117-123,160-166,179-184,185-193 1vc7 d1vc7a_ A:10-16,53-60,74-78,79-87 3bo2 d3bo2a1 A:10-16,53-60,74-78,79-87 1cvj d1cvjb1 B:11-17,53-60,73-78,79-87 1vc0 d1vc0a_ A:10-16,53-60,74-78,79-87 1vbx d1vbxa_ A:10-16,53-60,74-78,79-87 2ghp d2ghpc3 C:210-216,254-261,273-278,279-287 1sjf d1sjfa_ A:10-16,53-60,74-78,79-87 2dit d2dita1 A:16-22,65-71,86-90,91-99 2cpe d2cpea1 A:361-367,411-417,431-436,437-445 2ghp d2ghpg1 G:117-123,160-166,179-184,185-193 2nz4 d2nz4c1 C:10-16,53-60,74-78,79-87 1m5p d1m5pf_ F:10-16,53-60,74-78,79-87 2cqp d2cqpa1 A:925-932,968-975,988-993,994-1002 2ghp d2ghpc1 C:117-123,160-166,179-184,185-193 2ghp d2ghpa1 A:117-123,160-166,179-184,185-193 1u6b d1u6ba_ A:10-16,53-60,74-78,79-87 1urn d1urna_ A:10-16,53-60,74-78,79-87 1sj3 d1sj3p_ P:10-16,53-60,74-78,79-87 2ghp d2ghpg3 G:210-216,254-261,273-278,279-287 2ghp d2ghph1 H:117-123,160-166,179-184,185-193 1m5k d1m5kf_ F:10-16,53-60,74-78,79-87 1m5o d1m5oc_ C:10-16,53-60,74-78,79-87 1cvj d1cvjg2 G:99-105,139-146,159-164,165-173 1urn d1urnb_ B:10-16,53-60,74-78,79-87 1wel d1wela1 A:430-436,472-478,491-496,497-505 2oih d2oiha1 A:10-16,53-60,74-78,79-87 1m5o d1m5of_ F:10-16,53-60,74-78,79-87 1drz d1drza_ A:10-16,53-60,74-78,79-87 1x0f d1x0fa1 A:182-190,224-231,244-248,249-256 1cvj d1cvje2 E:99-105,139-146,160-164,165-173 1cx0 d1cx0a_ A:10-16,53-60,74-78,79-87 1m5k d1m5kc_ C:10-16,53-60,74-78,79-87 1m5p d1m5pc_ C:10-16,53-60,74-78,79-87 2evz d2evza2 A:131-137,170-176,189-194,196-204 3bo3 d3bo3a1 A:10-16,53-60,74-78,79-87 2adc d2adca2 A:454-460,492-499,512-517,519-527 2err d2erra1 A:116-123,157-165,177-182,183-191 1oia d1oiab_ B:10-16,53-60,74-78,79-87 1aud d1auda_ A:9-15,52-59,72-77,78-86 2oj3 d2oj3a1 A:10-16,53-60,74-78,79-87 3bo4 d3bo4a1 A:10-16,53-60,74-78,79-87 2cpj d2cpja1 A:73-79,108-115,129-134,135-143 1x5s d1x5sa1 A:13-19,55-61,75-80,81-89 1wwh d1wwha1 A:173-179,208-215,227-231,235-242 1wtb d1wtba1 A:182-189,223-231,243-248,249-256 2dgx d2dgxa1 A:554-561,598-605,618-623,624-632 2sxl d2sxla_ A:3-10,46-53,66-71,72-80 1oo0 d1oo0b_ B:71-79,115-122,135-140,141-149 1rk8 d1rk8a_ A:72-79,115-122,136-140,141-149 1hl6 d1hl6a_ A:71-79,115-122,136-140,141-149 2hyi d2hyib1 B:71-79,115-122,135-140,141-149 1p27 d1p27d_ D:71-79,115-122,135-140,141-149 2hyi d2hyih1 H:71-79,115-122,136-140,141-149 1p27 d1p27b_ B:71-79,115-122,136-140,141-149 2j0s d2j0sd1 D:71-79,115-122,136-140,141-149 1hl6 d1hl6c_ C:71-79,115-122,136-140,141-149 64. b.69.5 RCC1/BLIP-II two families are clearly related but differ by the number of strands per blade ! 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander 1i2m d1i2mb_ B:34-43,68-76,399-408,409-417 1a12 d1a12b_ B:34-42,68-76,398-408,409-418 1i2m d1i2md_ D:34-43,68-76,398-408,409-418 1a12 d1a12c_ C:34-42,68-76,398-408,409-418 1a12 d1a12a_ A:34-42,68-76,398-408,409-418 65. b.176.1 AttH-like AttH-like duplication: two flattened beta-barrels of lipocalin-like topology are orthogonally packed with a pseudo twofold symmetry 2ich d2icha1 A:224-236,238-249,322-336,341-349 2ich d2ichb1 B:224-236,238-249,323-336,341-349 2ich d2ichb1 B:46-59,61-74,181-194,205-218 2ich d2icha1 A:46-59,61-74,181-194,205-218 2ich d2ichb1 B:46-59,61-74,194-200,205-218 2ich d2icha1 A:46-59,61-74,194-200,205-218 66. d.220.1 Metal cation-transporting ATPase, ATP-binding domain N Metal cation-transporting ATPase, ATP-binding domain N unusual fold; core: beta-alpha(2)-beta(3)-alpha(2)-beta(2); 6-stranded antiparallel beta-sheet, order: 165432 1kju d1kjua3 A:363-374,375-386,559-568,591-600 1t5t d1t5ta3 A:361-374,375-386,559-568,591-601 1t5s d1t5sa3 A:361-374,375-386,559-568,591-601 1vfp d1vfpa3 A:361-374,375-386,559-568,591-601 1vfp d1vfpb3 B:361-374,375-386,559-568,591-601 2zbd d2zbda3 A:361-374,375-386,559-568,591-601 3b9r d3b9ra3 A:361-374,375-386,559-568,591-601 1wpg d1wpgc3 C:361-374,375-386,559-568,591-601 1wpg d1wpgb3 B:361-374,375-386,559-568,591-601 1iwo d1iwob3 B:361-374,375-386,559-568,591-601 1iwo d1iwoa3 A:361-374,375-386,559-568,591-601 2zbe d2zbea3 A:361-374,375-386,559-568,591-601 3b9b d3b9ba3 A:361-374,375-386,559-568,591-601 3b9r d3b9rb3 B:361-374,375-386,559-568,591-601 1su4 d1su4a3 A:361-374,375-386,559-568,591-601 2zbe d2zbeb3 B:361-374,375-386,559-568,591-601 2zbf d2zbfa3 A:361-374,375-386,559-568,591-601 1xp5 d1xp5a3 A:361-374,375-386,559-568,591-601 2zbg d2zbga3 A:361-374,375-386,559-568,591-601 1wpg d1wpgd3 D:361-374,375-386,559-568,591-601 1wpg d1wpga3 A:361-374,375-386,559-568,591-601 1q3i d1q3ia_ A:378-387,388-393,543-553,576-587 68. d.26.3 Chitinase insertion domain FKBP-like core: beta(2)-alpha-beta(2); antiparallel beta-sheet 1jnd d1jnda2 A:279-286,299-304,351-360,361-371 1jne d1jnea2 A:279-286,299-304,351-360,361-371 1ll6 d1ll6a2 A:292-299,318-322,338-347,348-354 1ll6 d1ll6c2 C:292-299,318-322,338-347,348-354 1ll6 d1ll6d2 D:292-299,318-322,338-347,348-354 1ll6 d1ll6b2 B:292-299,318-322,338-347,348-354 1ll7 d1ll7a2 A:292-299,318-322,338-347,348-354 1ll7 d1ll7b2 B:292-299,318-322,338-347,348-354 1ll4 d1ll4a2 A:292-299,318-322,338-347,348-354 1ll4 d1ll4c2 C:292-299,318-322,338-347,348-354 1ll4 d1ll4b2 B:292-299,318-322,338-347,348-354 1ll4 d1ll4d2 D:292-299,318-322,338-347,348-354 1d2k d1d2ka2 A:292-299,318-322,338-347,348-354 2a3c d2a3cb2 B:298-305,324-328,344-353,354-360 1wno d1wnob2 B:260-267,286-290,306-315,316-322 3chf d3chfa2 A:298-305,324-328,344-353,354-360 3chc d3chca2 A:298-305,324-328,344-353,354-360 3chc d3chcb2 B:298-305,324-328,344-353,354-360 2a3c d2a3ca2 A:298-305,324-328,344-353,354-360 2a3b d2a3ba2 A:298-305,324-328,344-353,354-360 2a3e d2a3eb2 B:298-305,324-328,344-353,354-360 2a3b d2a3bb2 B:298-305,324-328,344-353,354-360 1w9p d1w9pa2 A:298-305,324-328,344-353,354-360 3che d3chea2 A:298-305,324-328,344-353,354-360 1w9p d1w9pb2 B:298-305,324-328,344-353,354-360 3chf d3chfb2 B:298-305,324-328,344-353,354-360 2a3a d2a3aa2 A:298-305,324-328,344-353,354-360 3ch9 d3ch9a2 A:298-305,324-328,344-353,354-360 3chd d3chda2 A:298-305,324-328,344-353,354-360 2a3e d2a3ea2 A:298-305,324-328,344-353,354-360 2iuz d2iuza2 A:298-305,324-328,344-353,354-360 2iuz d2iuzb2 B:298-305,324-328,344-353,354-360 2a3a d2a3ab2 B:298-305,324-328,344-353,354-360 3che d3cheb2 B:298-305,324-328,344-353,354-360 3ch9 d3ch9b2 B:298-305,324-328,344-353,354-360 1w9u d1w9ua2 A:298-305,324-328,344-353,354-360 3chd d3chdb2 B:298-305,324-328,344-353,354-360 1w9u d1w9ub2 B:298-305,324-328,344-353,354-360 1w9v d1w9vb2 B:298-305,324-328,344-353,354-360 1wno d1wnoa2 A:260-267,286-290,306-315,316-322 1w9v d1w9va2 A:298-305,324-328,344-353,354-360 1hkj d1hkja2 A:267-274,283-289,320-328,329-335 1zu8 d1zu8a2 A:240-247,255-261,293-301,302-308 1owq d1owqa2 A:240-247,255-261,293-301,302-307 1zbc d1zbca2 A:240-247,255-261,293-301,302-307 1zb5 d1zb5a2 A:240-247,255-261,293-301,302-307 2pi6 d2pi6a2 A:240-247,255-261,293-301,302-307 2olh d2olha2 A:240-247,255-261,293-301,302-307 1xrv d1xrva2 A:240-247,255-261,293-301,302-307 2g8z d2g8za2 A:240-247,255-261,293-301,302-307 1zl1 d1zl1a2 A:240-247,255-261,293-301,302-307 2dsu d2dsua2 A:240-247,255-261,293-301,302-307 2dsz d2dsza2 A:240-247,255-261,293-301,302-307 2fdm d2fdma2 A:240-247,255-261,293-301,302-307 2dt1 d2dt1a2 A:240-247,255-261,293-301,302-307 2o92 d2o92a2 A:240-247,255-261,293-301,302-307 2dt3 d2dt3a2 A:240-247,255-261,293-301,302-307 1syt d1syta2 A:240-247,255-261,293-301,302-307 2o9o d2o9oa2 A:240-247,255-261,293-301,302-307 1sr0 d1sr0a2 A:240-247,255-261,293-301,302-307 2dpe d2dpea2 A:240-247,255-261,293-301,302-307 2esc d2esca2 A:240-247,255-261,293-301,302-307 2dsv d2dsva2 A:240-247,255-261,293-301,302-307 2qf8 d2qf8a2 A:240-247,255-261,293-301,302-307 2dt0 d2dt0a2 A:240-247,255-261,293-301,302-307 2dsw d2dswa2 A:240-247,255-261,293-301,302-307 1zbv d1zbva2 A:240-247,255-261,293-301,302-307 1zbw d1zbwa2 A:240-247,255-261,293-301,302-307 2b31 d2b31a2 A:240-247,255-261,293-301,302-307 2g41 d2g41a2 A:240-247,255-261,293-301,302-307 1ljy d1ljya2 A:240-247,255-261,293-301,302-307 1xhg d1xhga2 A:240-247,255-261,293-301,302-307 2dt2 d2dt2a2 A:240-247,255-261,293-301,302-307 2aos d2aosa2 A:240-247,255-261,293-301,302-307 1zbk d1zbka2 A:240-247,255-261,293-301,302-307 1hjv d1hjvb2 B:261-268,275-282,315-322,323-328 1tfv d1tfva2 A:239-246,254-260,292-300,301-306 1vf8 d1vf8a2 A:246-253,261-268,301-309,310-316 1hki d1hkia2 A:267-274,282-289,320-328,329-334 1nwt d1nwtb2 B:261-268,275-282,314-322,323-328 1hjw d1hjwa2 A:261-268,275-282,314-322,323-328 1lg1 d1lg1a2 A:267-274,282-289,320-328,329-334 1hjv d1hjva2 A:261-268,275-282,315-322,323-328 1lq0 d1lq0a2 A:267-274,282-289,320-328,329-334 1hjv d1hjvd2 D:261-268,275-282,316-322,323-328 1hjx d1hjxc2 C:261-268,275-282,316-322,323-328 1guv d1guva2 A:266-274,282-289,322-330,331-336 1kfw d1kfwa2 A:328-334,342-348,374-382,383-388 69. b.62.1 Cyclophilin-like Cyclophilin-like barrel, closed; n=8, S=10; complex topology 1m9f d1m9fa_ A:3-13,14-25,49-53,155-164 1m9x d1m9xa_ A:3-13,14-25,49-53,155-164 2alf d2alfa1 A:3-13,14-25,49-53,155-164 1qng d1qnga_ A:4-14,16-26,56-60,162-171 1e3b d1e3ba_ A:3-13,14-25,56-60,162-171 2igv d2igva1 A:3-13,14-25,56-60,162-171 1z81 d1z81a1 A:40-50,51-62,91-95,201-210 1awr d1awrb_ B:1003-1013,1014-1025,1049-1053,1155-1165 1m9y d1m9yf_ F:3-13,14-25,49-53,155-165 2cyh d2cyha_ A:3-13,14-25,49-53,155-165 2igw d2igwa1 A:3-13,14-25,56-60,162-171 1w8v d1w8va_ A:3-13,14-25,49-53,155-165 1iip d1iipa2 A:15-25,27-37,69-73,175-184 1awv d1awvc_ C:1003-1013,1014-1025,1049-1053,1155-1165 2biu d2biux1 X:3-13,14-25,49-53,155-165 1m9c d1m9cb_ B:3-13,14-25,49-53,155-165 1m9d d1m9da_ A:2-13,14-26,49-53,155-164 1awr d1awrc_ C:1003-1013,1014-1025,1049-1053,1155-1165 1awt d1awte_ E:1003-1013,1014-1025,1049-1053,1155-1165 1awt d1awta_ A:1003-1013,1014-1025,1049-1053,1155-1165 1awr d1awra_ A:1003-1013,1014-1025,1049-1053,1155-1165 1vdn d1vdna1 A:2-11,12-23,47-51,153-162 1awu d1awua_ A:1003-1013,1014-1025,1049-1053,1155-1165 1awr d1awrf_ F:1003-1013,1014-1025,1049-1053,1155-1165 1e8k d1e8ka_ A:2-13,14-26,56-60,162-172 1awt d1awtb_ B:1002-1013,1014-1026,1049-1053,1155-1165 1h0p d1h0pa_ A:23-37,38-49,73-77,180-191 1dyw d1dywa_ A:2-13,14-27,56-60,162-172 1zx8 d1zx8b1 B:-1-8,9-18,31-40,113-122 2esl d2esld1 D:32-47,48-59,83-87,190-200 1zx8 d1zx8a1 A:-1-8,9-18,31-40,113-122 1zx8 d1zx8c1 C:-1-8,9-18,31-40,113-122 1ist d1istb_ B:2-11,12-23,47-55,153-162 1m9y d1m9ya_ A:3-13,14-25,49-57,155-164 2a2n d2a2nb1 B:492-499,500-508,529-533,638-646 2cfe d2cfea1 A:3-11,12-23,47-55,153-162 1m9e d1m9eb_ B:3-13,14-25,49-57,155-164 1m9e d1m9ea_ A:3-13,14-25,49-57,155-164 1w74 d1w74a_ A:13-22,24-31,67-71,174-182 1m9y d1m9ye_ E:3-13,14-25,49-57,155-164 1m9x d1m9xf_ F:3-13,14-25,49-57,155-165 2oju d2ojua1 A:45-52,55-60,141-145,146-150 1m9x d1m9xe_ E:3-13,14-25,49-57,155-164 1ist d1ista_ A:2-11,12-23,47-55,153-162 1m63 d1m63c_ C:3-13,14-25,49-57,155-164 1m9x d1m9xb_ B:3-13,14-25,49-57,155-165 1nmk d1nmka_ A:3-13,14-25,49-57,155-164 2rmb d2rmbo_ O:3-13,14-25,49-57,155-165 1mik d1mika_ A:3-13,14-25,49-57,155-165 1cwc d1cwca_ A:3-13,14-25,49-57,155-165 1cwf d1cwfa_ A:3-13,14-25,49-57,155-165 1ak4 d1ak4a_ A:3-13,14-25,49-57,155-164 1xq7 d1xq7c_ C:4-15,16-27,51-59,157-166 1m9d d1m9db_ B:3-13,14-25,49-57,155-164 1qoi d1qoia_ A:10-20,22-32,61-69,168-177 1cwa d1cwaa_ A:3-13,14-25,49-57,155-165 1m9y d1m9yb_ B:3-13,14-25,49-57,155-165 1m9f d1m9fb_ B:3-13,14-25,49-57,155-165 1mzw d1mzwa_ A:10-20,22-32,61-69,168-177 1cwl d1cwla_ A:3-13,14-25,49-57,155-165 1oca d1ocaa_ A:3-13,14-25,51-57,155-165 1m9c d1m9ca_ A:3-13,14-25,49-57,155-164 1m63 d1m63g_ G:3-13,14-25,49-57,155-165 1cwi d1cwia_ A:3-13,14-25,49-57,155-165 2z6w d2z6wa1 A:3-13,14-25,49-57,155-165 1bck d1bcka_ A:3-13,14-25,49-57,155-165 1clh d1clha_ A:5-12,13-20,42-51,157-166 1ihg d1ihga2 A:15-25,27-37,69-77,175-184 1nmk d1nmkb_ B:3-13,14-25,49-57,155-165 1rmh d1rmha_ A:3-13,14-25,49-57,155-165 1cwm d1cwma_ A:3-13,14-25,49-57,155-165 1xo7 d1xo7a_ A:4-15,16-27,51-59,157-166 2rmb d2rmbq_ Q:3-13,14-25,49-57,155-165 1cwb d1cwba_ A:3-13,14-25,49-57,155-165 1ynd d1ynda1 A:3-13,14-25,49-57,155-165 1ak4 d1ak4b_ B:3-13,14-25,49-57,155-165 1mf8 d1mf8c_ C:3-13,14-25,49-57,155-164 1awt d1awtd_ D:1003-1013,1014-1025,1049-1057,1155-1165 1awr d1awre_ E:1003-1013,1014-1025,1049-1057,1155-1165 2bit d2bitx1 X:3-13,14-25,49-57,155-165 2rmb d2rmbc_ C:3-13,14-25,49-57,155-165 2rma d2rmak_ K:3-13,14-25,49-57,155-165 1xo7 d1xo7b_ B:4-15,16-27,51-59,157-166 2rmb d2rmbs_ S:3-13,14-25,49-57,155-165 2rma d2rmag_ G:3-13,14-25,49-57,155-165 1xo7 d1xo7c_ C:4-15,16-27,51-59,157-166 2cpl d2cpla_ A:3-13,14-25,49-57,155-165 2r99 d2r99a1 A:139-149,150-161,185-193,291-300 1zmf d1zmfa1 A:139-149,150-161,185-193,291-300 2rma d2rmas_ S:3-13,14-25,49-57,155-165 1cwk d1cwka_ A:3-13,14-25,49-57,155-165 2rma d2rmaa_ A:3-13,14-25,49-57,155-165 1cwj d1cwja_ A:3-13,14-25,49-57,155-165 2rma d2rmae_ E:3-13,14-25,49-57,155-165 1awt d1awtf_ F:1003-1013,1014-1025,1049-1057,1155-1165 2rma d2rmai_ I:3-13,14-25,49-57,155-165 1cwh d1cwha_ A:3-13,14-25,49-57,155-165 1vbs d1vbsa_ A:3-13,14-25,49-57,155-165 2rmb d2rmbk_ K:3-13,14-25,49-57,155-165 2rmb d2rmbe_ E:3-13,14-25,49-57,155-165 3cyh d3cyha_ A:3-13,14-25,49-57,155-165 2rmb d2rmbg_ G:3-13,14-25,49-57,155-165 1vbt d1vbtb_ B:3-13,14-25,49-57,155-165 2rma d2rmam_ M:3-13,14-25,49-57,155-165 1w8m d1w8ma_ A:3-13,14-25,50-57,155-165 1cwo d1cwoa_ A:3-13,14-25,50-57,155-165 1xq7 d1xq7b_ B:2-15,16-27,51-59,157-166 1xq7 d1xq7a_ A:2-15,16-27,51-59,157-166 1zkc d1zkca1 A:317-325,328-333,414-418,419-423 4cyh d4cyha_ A:3-13,14-25,49-57,155-165 1aws d1awsa_ A:1003-1013,1014-1025,1050-1057,1155-1165 2rma d2rmao_ O:3-13,14-25,50-57,155-165 2ok3 d2ok3a1 A:38-46,49-54,135-139,140-144 2rmb d2rmbi_ I:3-13,14-25,50-57,155-165 1rmh d1rmhb_ B:3-13,14-25,50-57,155-165 1qnh d1qnhb_ B:4-14,15-26,56-64,162-170 2rmb d2rmbm_ M:3-13,14-25,50-57,155-165 5cyh d5cyha_ A:3-13,14-25,49-57,155-165 1j2a d1j2aa_ A:4-12,13-21,42-50,156-165 2rmb d2rmba_ A:3-13,14-25,50-57,155-165 2rma d2rmaq_ Q:3-13,14-25,50-57,155-165 1vbt d1vbta_ A:3-13,14-25,50-57,155-165 1ynd d1yndb1 B:3-13,14-25,50-57,155-165 1awt d1awtc_ C:1003-1013,1014-1025,1050-1057,1155-1165 2a2n d2a2nc1 C:529-537,540-545,626-630,631-635 1xyh d1xyha1 A:38-46,49-54,135-139,140-144 2oju d2ojub1 B:44-52,55-60,141-145,146-150 2rma d2rmac_ C:3-13,14-25,50-57,155-165 2a2n d2a2na1 A:529-537,540-545,626-630,631-635 1c5f d1c5fm_ M:6-16,17-28,62-68,167-176 1c5f d1c5fg_ G:6-16,17-28,62-68,167-176 1c5f d1c5fe_ E:6-16,17-28,62-68,167-176 2rmc d2rmcc_ C:37-47,48-59,83-91,190-200 2c3b d2c3bb1 B:3-11,18-28,52-61,163-171 1lop d1lopa_ A:37-45,48-53,140-145,146-152 1v9t d1v9ta_ A:42-50,53-58,142-147,148-154 1c5f d1c5fo_ O:6-16,17-28,61-68,167-176 1vai d1vaia_ A:42-50,53-58,142-147,148-154 1v9t d1v9tb_ B:42-50,53-58,142-147,148-154 1w74 d1w74b_ B:13-22,24-31,67-75,174-182 1xo7 d1xo7d_ D:4-15,16-27,51-60,157-166 2a2n d2a2nc1 C:492-499,500-508,529-537,638-646 1c5f d1c5fc_ C:6-16,17-28,62-68,167-176 2nul d2nula_ A:37-45,48-53,140-145,146-152 1qnh d1qnha_ A:3-14,15-27,56-64,162-170 2rmc d2rmcg_ G:33-47,48-59,83-91,190-200 2a2n d2a2na1 A:492-499,500-508,529-537,638-646 1zkc d1zkca1 A:278-287,288-298,317-325,426-436 1zkc d1zkcb1 B:278-287,288-298,317-325,426-436 1cyn d1cyna_ A:8-21,22-33,57-65,164-174 1c5f d1c5fi_ I:5-16,17-29,61-68,167-176 2esl d2eslc1 C:33-47,48-59,83-91,190-200 2c3b d2c3ba1 A:3-11,18-28,53-61,163-171 2rmc d2rmca_ A:33-47,48-59,83-91,190-200 1zkc d1zkcb1 B:317-325,327-333,414-418,419-423 2rmc d2rmce_ E:33-47,48-59,83-91,190-200 2fu0 d2fu0a1 A:6-13,14-22,44-51,151-159 1xwn d1xwna1 A:12-19,20-28,49-58,157-165 1c5f d1c5fk_ K:5-16,17-29,62-68,167-176 2nul d2nula_ A:1-7,8-16,37-45,155-163 1lop d1lopa_ A:1-7,8-16,37-45,155-163 1vai d1vaib_ B:3-12,13-21,42-50,157-165 1v9t d1v9tb_ B:4-12,13-21,42-50,157-165 2ok3 d2ok3a1 A:1-8,9-17,38-46,147-155 2esl d2esla1 A:32-47,48-59,83-91,190-200 1xyh d1xyha1 A:1-8,9-17,38-46,147-155 1v9t d1v9ta_ A:4-12,13-21,42-50,157-165 2esl d2eslb1 B:32-47,48-59,83-91,190-200 2esl d2eslf1 F:32-47,48-59,83-91,190-200 1vai d1vaia_ A:5-12,13-21,42-50,157-165 2oju d2ojua1 A:7-14,15-23,45-52,153-162 2esl d2esle1 E:33-47,48-59,83-91,190-201 2oju d2ojub1 B:5-14,15-23,44-52,153-163 2b71 d2b71a1 A:39-46,48-55,76-84,184-191 1a33 d1a33a_ A:5-16,17-29,62-69,167-176 72. e.38.1 Release factor Release factor 4 domains: (1) 3-helical bundle; (2) alpha+beta of ferredoxin-like fold (3 and 4) alpha+beta of dsRDB-like fold 1gqe d1gqea_ A:127-135,175-185,196-204,213-225 1rq0 d1rq0b_ B:486-497,534-547,556-564,573-585 2b3t d2b3tb1 B:110-120,157-168,179-187,196-208 1rq0 d1rq0c_ C:886-897,934-947,956-964,973-985 1rq0 d1rq0a_ A:86-97,134-147,156-164,173-185 2fvo d2fvoa1 A:85-97,134-147,156-164,173-185 74. c.91.1 PEP carboxykinase-like PEP carboxykinase-like contains a P-loop NTP-binding motif; mixed beta-sheet folds into a barrel-like structure with helices packed on one side 2pc9 d2pc9d1 D:355-359,419-427,459-466,467-474 1j3b d1j3bb1 B:355-359,419-427,459-466,467-474 2pc9 d2pc9a1 A:355-359,419-427,459-466,467-474 1j3b d1j3ba1 A:355-359,419-427,459-466,467-474 1aq2 d1aq2a1 A:370-374,434-442,471-477,478-484 2olq d2olqa1 A:370-374,434-442,471-477,478-484 1k3c d1k3ca1 A:370-374,434-442,471-477,478-484 2pc9 d2pc9c1 C:355-359,419-427,460-465,468-473 1xkv d1xkvb1 B:355-359,419-427,460-466,467-473 2pxz d2pxzx1 X:370-374,434-442,471-477,478-484 2pc9 d2pc9b1 B:355-359,419-427,460-465,468-473 2py7 d2py7x1 X:370-374,434-442,471-477,478-484 1k3d d1k3da1 A:370-374,434-442,471-477,478-484 2olr d2olra1 A:370-374,434-442,471-477,478-484 1ayl d1ayla1 A:370-374,434-442,471-477,478-484 1os1 d1os1a1 A:370-374,434-442,471-477,478-484 1xkv d1xkva1 A:355-359,419-427,460-466,467-473 1khb d1khba1 A:443-447,509-521,549-554,555-560 1oen d1oena1 A:370-374,434-444,471-477,478-484 1khe d1khea1 A:443-447,509-521,549-554,555-560 1ii2 d1ii2b1 B:343-347,408-416,450-456,457-463 1khf d1khfa1 A:443-447,509-521,549-554,555-560 1nhx d1nhxa1 A:443-447,509-521,549-554,555-560 1khg d1khga1 A:443-447,509-515,549-554,555-560 1ii2 d1ii2a1 A:343-347,408-416,450-456,457-463 1m51 d1m51a1 A:443-447,509-521,549-554,555-560 2gmv d2gmvb1 B:443-447,509-515,550-554,555-559 2gmv d2gmva1 A:443-447,509-521,550-554,555-559 77. b.61.5 Dipeptidyl peptidase I (cathepsin C), exclusion domain Streptavidin-like barrel, closed; n=8, S=10; meander 2djf d2djfa1 A:13-21,36-46,95-105,109-118 1jqp d1jqpa1 A:13-24,36-46,95-105,109-118 2djg d2djga1 A:13-25,36-46,95-105,109-118 1k3b d1k3ba_ A:13-24,37-46,95-105,109-119 78. d.171.1 Fibrinogen C-terminal domain-like Fibrinogen C-terminal domain-like unusual fold 1lwu d1lwuc1 C:194-198,224-228,241-251,377-387 1lwu d1lwui1 I:194-198,224-228,241-251,377-387 1lwu d1lwul1 L:194-198,224-228,241-251,377-387 1fzb d1fzbb1 B:252-256,287-295,307-317,447-457 1lwu d1lwuf1 F:194-198,224-228,241-251,377-387 1fzb d1fzbe1 E:252-256,287-295,307-317,447-457 1n73 d1n73b1 B:273-277,308-314,327-337,467-476 1m1j d1m1je1 E:257-261,291-299,311-321,451-461 1n73 d1n73f1 F:194-198,224-228,241-251,378-387 1lt9 d1lt9b1 B:252-256,287-295,307-317,447-457 1fzc d1fzce1 E:252-256,287-295,307-317,447-457 1n73 d1n73c1 C:194-198,224-228,241-251,378-387 1m1j d1m1jb1 B:257-261,291-299,311-321,451-461 1rf0 d1rf0b1 B:252-256,287-295,307-317,447-457 1lwu d1lwuk1 K:273-277,308-314,327-337,467-476 1lwu d1lwuh1 H:273-277,308-314,327-337,467-476 1lwu d1lwub1 B:273-277,308-314,327-337,467-476 1lwu d1lwue1 E:273-277,308-314,327-337,467-476 1re4 d1re4b1 B:252-256,287-295,307-317,447-457 1re4 d1re4e1 E:252-256,287-295,307-317,448-457 1fzd d1fzdf_ F:653-660,684-691,702-712,834-844 1n8e d1n8ee1 E:252-256,287-294,307-316,447-457 1n8e d1n8eb1 B:252-256,287-294,307-316,448-457 1fzd d1fzde_ E:653-660,684-691,702-712,835-843 1fzd d1fzdh_ H:653-660,684-691,702-712,835-844 1fzd d1fzdc_ C:653-660,684-691,702-712,834-844 1fzd d1fzdg_ G:653-660,684-691,702-712,834-844 1ltj d1ltje1 E:252-256,288-294,307-317,447-457 1fzc d1fzcb1 B:252-256,288-294,307-317,448-457 1fzf d1fzfb1 B:252-256,287-294,307-317,447-457 1lt9 d1lt9e1 E:252-256,287-294,307-317,448-457 1fzf d1fzfe1 E:252-256,287-294,307-317,447-457 1fzg d1fzgb1 B:252-256,287-294,307-317,447-457 1rf1 d1rf1e1 E:252-256,287-294,307-317,448-457 1re3 d1re3b1 B:252-256,287-294,307-317,447-457 1fze d1fzee1 E:252-256,287-294,307-317,447-457 1fzg d1fzge1 E:252-256,287-294,307-317,447-457 1rf1 d1rf1b1 B:252-256,287-294,307-317,448-457 1fze d1fzeb1 B:252-256,287-294,307-317,448-457 1rf0 d1rf0e1 E:252-256,287-294,307-317,447-457 1ltj d1ltjb1 B:252-256,287-294,307-317,447-457 1re3 d1re3e1 E:252-256,287-294,307-317,447-457 1fzd d1fzdb_ B:653-660,684-690,702-712,835-844 1n86 d1n86b1 B:252-256,287-294,307-317,447-457 1n86 d1n86e1 E:252-256,287-294,307-317,448-457 1n86 d1n86c1 C:194-198,225-229,243-253,380-389 1n86 d1n86f1 F:194-198,225-229,243-253,380-389 1fzd d1fzda_ A:653-660,684-690,702-712,834-843 1m1j d1m1jc1 C:194-198,225-229,243-253,379-389 1ltj d1ltjf1 F:194-198,225-229,243-253,379-389 1jc9 d1jc9a_ A:92-96,122-126,138-148,253-262 1re4 d1re4f1 F:194-198,225-229,243-253,380-389 1lt9 d1lt9c1 C:194-198,225-229,243-253,380-389 1fzd d1fzdd_ D:653-660,684-690,702-712,834-844 1fze d1fzec1 C:194-198,225-229,243-253,380-389 1fic d1ficb_ B:194-198,225-229,243-253,380-389 1fze d1fzef1 F:194-198,225-229,243-253,380-389 1fzg d1fzgc1 C:194-198,225-229,243-253,380-389 1lt9 d1lt9f1 F:194-198,225-229,243-253,380-389 1rf1 d1rf1c1 C:194-198,225-229,243-253,380-389 1fza d1fzab1 B:252-256,291-295,307-317,448-457 1fza d1fzae1 E:252-256,291-295,307-317,448-457 1fzf d1fzff1 F:194-198,225-229,243-253,379-389 1fzf d1fzfc1 C:194-198,225-229,243-253,380-389 1fic d1fica_ A:194-198,225-229,243-253,380-389 1fzg d1fzgf1 F:194-198,225-229,243-253,380-389 1fid d1fida_ A:194-198,225-229,243-253,380-389 1re3 d1re3f1 F:194-198,225-229,243-253,380-389 1fza d1fzac1 C:188-198,225-229,243-253,380-389 1fza d1fzaf1 F:188-198,225-229,243-253,380-389 2fib d2fiba_ A:194-198,225-229,243-253,380-389 1re3 d1re3c1 C:194-198,225-229,243-253,380-389 1rf1 d1rf1f1 F:188-198,225-229,243-253,380-389 1fzc d1fzcc1 C:188-198,225-229,243-253,380-389 1m1j d1m1jf1 F:188-198,225-229,243-253,380-389 2oyh d2oyhc1 C:188-198,225-229,243-253,380-389 1fzc d1fzcf1 F:188-198,225-229,243-253,380-389 1ltj d1ltjc1 C:188-198,225-229,243-253,380-389 1n8e d1n8ec1 C:188-198,225-229,243-252,380-389 2oyi d2oyic1 C:188-198,225-229,243-253,380-389 1n8e d1n8ef1 F:188-198,225-229,243-252,380-389 1n73 d1n73e1 E:273-277,304-314,327-337,467-476 79. d.347.1 Acetoacetate decarboxylase-like Acetoacetate decarboxylase-like complex fold: contains a 3-layer beta-sheet structure, which is folded in two conjoint barrels capped by helices; one rounded barrel has 7 strands, the other flattened barrel has 9 strands 3cmb d3cmbc1 C:30-40,58-68,203-212,240-251 3cmb d3cmbb1 B:30-40,58-71,203-211,240-251 3cmb d3cmbd1 D:30-40,58-71,203-211,240-251 3cmb d3cmba1 A:30-40,58-71,203-211,240-251 3c8w d3c8wc1 C:37-48,66-77,198-209,228-240 3c8w d3c8wa1 A:37-48,66-79,198-209,228-240 3c8w d3c8wd1 D:37-48,66-79,198-209,228-240 3c8w d3c8wb1 B:37-48,66-79,198-209,228-240 3c8w d3c8wd1 D:33-37,66-79,198-209,240-244 3c8w d3c8wa1 A:33-37,66-79,198-209,240-244 3c8w d3c8wb1 B:33-37,66-79,198-209,240-244 3cmb d3cmbb1 B:30-40,58-71,203-211,251-257 3cmb d3cmbd1 D:30-40,58-71,203-211,251-257 3cmb d3cmba1 A:30-40,58-71,203-211,251-257 80. b.177.1 YmcC-like YmcC-like 12-stranded meander beta-sheet, folded into a deformed beta-barrel; topological similarity to the LolA-like fold (scop_cf 89391) 2in5 d2in5a1 A:35-42,44-56,173-184,187-196 2in5 d2in5b1 B:33-42,46-56,173-184,187-198 81. f.46.1 HlyD-like secretion proteins HlyD-like secretion proteins consists of three domains: beta-barrel (res. 29-38,170-259; scop_cf 50412); barrel-sandwich hybrid (39-72,135-169; scop_sf 51230) and long alpha-hairpin (73-134; scop_cf 46556) 1t5e d1t5ei_ I:29-37,171-180,202-211,251-259 1t5e d1t5ej_ J:29-36,171-180,202-211,251-259 1t5e d1t5ee_ E:29-36,171-180,202-211,251-259 1t5e d1t5eb_ B:29-36,171-180,202-211,251-259 1t5e d1t5eh_ H:29-36,171-180,202-211,251-259 1t5e d1t5ef_ F:29-36,171-180,202-211,251-259 1t5e d1t5ek_ K:29-36,171-180,202-211,251-259 1t5e d1t5el_ L:29-36,171-180,202-211,251-259 1t5e d1t5ea_ A:29-36,171-180,202-211,251-259 1t5e d1t5ed_ D:29-36,171-180,202-211,251-259 1t5e d1t5em_ M:29-36,171-180,202-211,251-259 1t5e d1t5eg_ G:29-36,171-180,202-211,251-259 1t5e d1t5ec_ C:29-36,171-180,202-211,251-259 1vf7 d1vf7k_ K:30-36,171-180,207-211,251-258 1vf7 d1vf7m_ M:29-37,171-180,202-211,251-259 1vf7 d1vf7d_ D:28-36,171-180,202-211,251-260 1vf7 d1vf7i_ I:28-36,171-180,202-211,251-260 1vf7 d1vf7f_ F:28-36,171-180,202-211,251-260 1vf7 d1vf7l_ L:28-36,171-180,202-211,251-260 1vf7 d1vf7j_ J:28-36,171-180,202-211,251-260 1vf7 d1vf7b_ B:28-36,171-180,202-211,251-260 1vf7 d1vf7g_ G:27-36,171-180,202-211,251-261 1vf7 d1vf7h_ H:27-36,171-180,202-211,251-261 1vf7 d1vf7a_ A:26-36,171-180,202-211,251-262 1vf7 d1vf7c_ C:24-36,171-180,202-211,251-265 1vf7 d1vf7e_ E:23-36,171-180,202-211,251-266 84. d.172.1 gp120 core gp120 core unusual fold 2ny0 d2ny0a1 A:119-126,196-205,422-426,431-435 2ny4 d2ny4a1 A:119-126,196-205,422-426,431-435 2b4c d2b4cg1 G:119-126,196-205,422-426,431-435 2nxz d2nxza1 A:119-126,196-205,422-426,431-435 2ny2 d2ny2a1 A:119-126,196-203,422-426,431-435 2ny5 d2ny5g1 G:119-126,196-203,422-426,431-435 2nxy d2nxya1 A:119-126,196-205,422-426,431-435 2ny6 d2ny6a1 A:119-126,196-205,422-426,431-435 2ny1 d2ny1a1 A:118-126,196-203,422-426,431-435 2ny3 d2ny3a1 A:118-126,196-203,422-426,431-435 1gc1 d1gc1g_ G:118-126,196-203,422-426,431-435 1rzj d1rzjg_ G:118-126,196-203,422-426,431-435 1rzk d1rzkg_ G:118-126,196-203,422-426,431-435 1g9m d1g9mg_ G:118-126,196-203,422-426,431-435 2i5y d2i5yp1 P:118-127,195-203,422-426,431-435 1g9n d1g9ng_ G:118-126,196-203,422-426,431-435 1yyl d1yylg1 G:118-128,194-203,422-426,431-435 2i60 d2i60p1 P:119-128,194-203,422-426,431-435 1yym d1yymg1 G:118-128,194-203,422-426,431-435 1yym d1yymp1 P:1118-1128,1194-1203,1422-1426,1431-1435 2i60 d2i60g1 G:118-128,194-203,422-426,431-435 1yyl d1yylp1 P:1118-1128,1194-1203,1422-1426,1431-1435 2i5y d2i5yg1 G:119-128,194-205,422-426,431-435 86. b.61.3 D-aminopeptidase, middle and C-terminal domains Streptavidin-like barrel, closed; n=8, S=10; meander 1ei5 d1ei5a2 A:427-434,435-445,498-508,509-519 1ei5 d1ei5a1 A:347-354,355-365,400-408,409-418 87. d.343.1 MM3350-like MM3350-like beta(2)-alpha-beta(4); antiparallel beta-sheet; order: 216534; similar to a ubiquitin-like fold with the extra C-terminal strand inserted in the middle of the beta-sheet 2i1s d2i1sa1 A:6-16,22-30,99-106,110-123 2i1s d2i1sb1 B:6-16,22-30,99-106,110-123 88. b.141.1 Bacterial fluorinating enzyme, C-terminal domain Bacterial fluorinating enzyme, C-terminal domain barrel, closed; n=7, S=10; greek-key topology; one overside connection 1rqp d1rqpa1 A:200-212,213-219,234-241,292-298 2c2w d2c2wa1 A:200-212,213-219,234-241,292-298 2c4u d2c4ud1 D:200-212,213-219,232-241,292-298 2v7t d2v7ta1 A:200-212,213-219,234-241,292-298 2c5h d2c5ha1 A:200-212,213-219,233-241,292-298 2c4u d2c4ua1 A:200-212,213-219,234-241,292-298 2v7t d2v7tb1 B:200-212,213-219,234-241,292-298 2v7w d2v7wb1 B:200-212,213-219,234-241,292-298 2cc2 d2cc2b1 B:200-212,213-219,234-241,292-298 2c4t d2c4ta1 A:200-212,213-219,232-241,292-298 2v7v d2v7va1 A:200-212,213-219,234-241,292-298 2v7w d2v7wa1 A:200-212,213-219,234-241,292-298 2c4u d2c4ub1 B:200-212,213-219,234-241,292-298 2v7t d2v7tc1 C:200-212,213-219,234-241,292-298 1rqp d1rqpb1 B:200-212,213-219,234-241,292-298 2v7u d2v7ub1 B:200-212,213-219,234-241,292-298 2v7u d2v7uc1 C:200-212,213-219,234-241,292-298 1rqr d1rqra1 A:200-212,213-219,234-241,292-298 2v7u d2v7ua1 A:200-212,213-219,234-241,292-298 2cc2 d2cc2a1 A:200-212,213-219,233-241,292-298 1rqp d1rqpc1 C:200-212,213-219,234-241,292-298 1rqr d1rqrc1 C:200-212,213-219,234-241,292-298 2v7v d2v7vc1 C:200-212,213-219,234-241,292-298 2v7w d2v7wc1 C:200-212,213-219,234-241,292-298 2cc2 d2cc2c1 C:200-212,213-219,234-241,292-298 2c4u d2c4uf1 F:200-212,213-219,234-241,292-298 2c2w d2c2wb1 B:200-212,213-219,234-241,290-298 2cbx d2cbxa1 A:200-212,213-219,233-241,290-298 2c4t d2c4tc1 C:200-212,213-219,234-241,290-298 2v7x d2v7xc1 C:200-212,213-219,234-241,290-298 2c5b d2c5bb1 B:200-212,213-219,234-241,292-298 2cbx d2cbxb1 B:200-212,213-219,234-241,290-298 2c4u d2c4uc1 C:200-212,213-219,234-241,292-298 2v7x d2v7xa1 A:200-212,213-219,234-241,290-298 2c4t d2c4tb1 B:200-212,213-219,234-241,290-298 2c2w d2c2wc1 C:200-212,213-219,234-241,290-298 2c5b d2c5ba1 A:200-212,213-219,234-241,290-298 2v7x d2v7xb1 B:200-212,213-219,234-241,290-298 2cbx d2cbxc1 C:200-212,213-219,234-241,290-298 2c4u d2c4ue1 E:200-212,213-219,234-241,290-298 2c5h d2c5hb1 B:200-212,213-219,234-241,292-298 2c5b d2c5bc1 C:200-212,213-219,232-241,290-298 2c5h d2c5hc1 C:200-212,213-219,233-241,290-298 2v7v d2v7vb1 B:201-212,213-219,234-241,292-298 1rqr d1rqrb1 B:201-212,213-219,234-241,292-298 89. f.4.1 OMPA-like forms (8,10) barrel ! Transmembrane beta-barrels not a true fold, gathers together transmembrane barrels of different (n,S) 2ge4 d2ge4a1 A:4-18,32-46,134-143,160-170 1ys5 d1ys5a1 A:47-60,62-69,133-142,148-156 1g90 d1g90a_ A:4-16,34-46,134-143,160-170 1qjp d1qjpa_ A:4-17,33-46,134-145,160-171 1bxw d1bxwa_ A:4-18,32-46,134-145,160-171 1mm5 d1mm5a_ A:23-33,52-63,136-146,151-163 1qj9 d1qj9a_ A:1-15,20-32,120-133,134-148 1qj8 d1qj8a_ A:1-15,18-32,120-133,134-148 1thq d1thqa_ A:21-34,51-62,135-145,150-162 2axt d2axto1 O:64-80,90-94,234-250,253-271 1p4t d1p4ta_ A:3-20,21-38,121-135,138-155 2axt d2axto1 O:64-80,102-114,234-250,253-271 1q9f d1q9fa_ A:5-15,21-32,119-133,134-148 91. d.290.1 AF0104/ALDC/Ptd012-like characteristic metal ion (zinc)-binding motif in the putative active site ! AF0104/ALDC/Ptd012-like duplication: consists of two similar beta-alpha-beta(4) motifs 2hx0 d2hx0a1 A:50-56,62-67,81-92,94-102 2nmu d2nmua1 A:50-56,62-67,81-92,94-102 1xcr d1xcra1 A:211-219,238-246,264-271,276-283 1xcr d1xcrb1 B:211-219,238-246,264-271,276-284 1xv2 d1xv2a_ A:119-126,143-150,171-179,183-188 1xv2 d1xv2b_ B:119-126,143-150,171-179,183-188 2h6l d2h6lb1 B:47-56,59-69,84-97,98-111 1xv2 d1xv2c_ C:119-126,143-150,171-179,183-188 1xv2 d1xv2d_ D:119-126,143-150,171-179,183-188 2h6l d2h6la1 A:47-56,59-69,84-97,98-111 2h6l d2h6lc1 C:47-56,59-69,84-97,98-111 92. b.60.1 Lipocalins bind hydrophobic ligands in their interior ! Lipocalins barrel, closed or opened; n=8, S=12; meander 2a13 d2a13a1 A:28-37,43-54,140-150,156-164 2fr2 d2fr2a1 A:16-26,32-43,137-148,153-163 1r0u d1r0ua_ A:5-18,19-29,110-122,128-139 2joz d2joza1 A:19-24,33-42,96-103,104-112 1o1u d1o1ua_ A:2-9,35-44,106-115,116-126 1eqd d1eqda_ A:19-32,39-50,115-125,131-139 1d2u d1d2ua_ A:19-32,39-50,115-125,131-139 1qwd d1qwda_ A:41-49,57-68,126-133,137-143 1qwd d1qwdb_ B:41-49,57-68,126-133,137-143 1jjj d1jjja_ A:8-18,39-49,114-123,124-134 2f73 d2f73c1 C:3-10,37-45,107-116,117-127 1np4 d1np4a_ A:19-32,39-50,115-125,131-139 3ifb d3ifba_ A:3-13,34-44,111-120,121-131 1d3s d1d3sa_ A:19-32,39-50,115-126,131-139 1x8q d1x8qa_ A:19-32,39-50,115-126,131-139 2at6 d2at6x1 X:19-32,39-50,115-126,131-139 1fem d1fema_ A:21-27,40-49,113-122,130-139 2o62 d2o62a2 A:12-24,26-42,101-112,114-127 1aqb d1aqba_ A:21-27,40-49,113-122,130-139 1ywc d1ywca1 A:19-32,39-50,115-126,131-139 3c77 d3c77x1 X:19-32,39-50,115-126,131-139 3c78 d3c78x1 X:19-32,39-50,115-126,131-139 3c76 d3c76x1 X:19-32,39-50,115-126,131-139 1kt4 d1kt4a_ A:21-27,40-49,113-122,130-139 1ml7 d1ml7a_ A:19-32,39-50,115-126,131-139 1hbp d1hbpa_ A:21-27,40-49,113-122,130-139 1kt5 d1kt5a_ A:21-27,40-49,113-122,130-139 1jyj d1jyja_ A:21-27,39-49,113-122,130-139 1kt7 d1kt7a_ A:21-27,40-49,113-122,130-139 1erb d1erba_ A:21-27,40-49,113-122,130-139 1hbq d1hbqa_ A:21-27,40-49,113-122,130-139 1jyd d1jyda_ A:21-27,41-49,113-122,130-139 1rbp d1rbpa_ A:21-27,40-49,113-122,130-139 1sxu d1sxua_ A:19-32,39-50,115-126,131-139 1sxy d1sxya_ A:19-32,39-50,115-126,131-139 1fen d1fena_ A:21-27,40-49,113-122,130-139 1kzx d1kzxa_ A:3-13,34-44,111-120,121-131 1rlb d1rlbe_ E:21-27,40-49,113-122,130-139 1fel d1fela_ A:21-27,40-49,113-122,130-139 1vpr d1vpra1 A:1027-1035,1070-1078,1149-1160,1161-1173 1brp d1brpa_ A:21-27,37-49,113-122,130-139 1rlb d1rlbf_ F:21-27,40-49,113-122,130-139 2a0a d2a0aa1 A:5-12,38-46,111-120,121-131 1eii d1eiia_ A:6-16,38-47,114-123,126-133 1xca d1xcab_ B:4-14,38-47,117-126,127-137 3emm d3emma1 A:28-37,43-54,140-151,155-164 1ure d1urea_ A:3-13,34-44,111-120,121-131 2ifb d2ifba_ A:3-13,34-44,111-120,121-131 1blr d1blra_ A:4-11,39-47,117-126,127-137 1ywd d1ywda1 A:19-32,40-50,115-125,131-139 1brq d1brqa_ A:21-27,40-49,113-122,130-139 1ifc d1ifca_ A:3-13,34-44,111-120,121-131 1ifb d1ifba_ A:3-13,34-44,111-120,121-131 1lnm d1lnma_ A:23-32,40-51,108-117,124-133 2o62 d2o62b2 B:13-24,26-42,101-112,114-127 1qfv d1qfvb_ B:28-35,48-59,118-127,130-139 1qft d1qftb_ B:28-35,48-59,118-127,130-139 1lke d1lkea_ A:23-32,40-51,108-117,124-133 1qfv d1qfva_ A:28-35,48-59,118-127,130-139 1ike d1ikea_ A:19-32,40-50,115-126,131-139 1oee d1oeea_ A:37-42,82-89,153-160,173-179 1oek d1oeka_ A:36-42,82-89,153-160,173-179 1iw2 d1iw2a_ A:28-38,52-61,114-123,124-133 1ikj d1ikja_ A:19-32,40-50,115-126,131-139 1s7d d1s7da_ A:37-42,82-89,153-160,173-179 1sy2 d1sy2a_ A:19-32,40-50,115-126,131-139 2ju7 d2ju7a1 A:3-14,36-45,107-116,117-126 1u0x d1u0xa_ A:19-32,40-50,115-126,131-139 1txl d1txla_ A:58-64,104-111,175-182,195-201 1oej d1oeja_ A:36-42,82-89,153-160,173-179 1x8p d1x8pa_ A:19-32,40-50,115-126,131-139 2at0 d2at0x1 X:19-32,40-50,115-126,131-139 1sxx d1sxxa_ A:19-32,40-50,115-126,131-139 2ju8 d2ju8a1 A:3-13,36-45,107-116,117-127 2f73 d2f73h1 H:3-14,37-45,107-116,117-127 1pm1 d1pm1x_ X:21-29,36-48,114-125,126-138 2q4n d2q4na1 A:28-39,40-54,140-151,152-166 1icn d1icna_ A:3-13,35-44,111-120,121-131 1kzw d1kzwa_ A:3-13,35-44,111-120,121-131 2all d2allx1 X:21-29,36-48,114-125,126-138 1lf7 d1lf7a_ A:28-38,52-61,114-123,124-133 2a3f d2a3fx1 X:21-30,36-48,114-125,126-138 1sa8 d1sa8a_ A:3-9,10-19,86-95,96-106 2eu7 d2eu7x1 X:21-31,36-48,114-125,126-138 2hys d2hysa1 A:21-30,36-48,114-125,126-138 2amm d2ammx1 X:21-30,36-48,114-125,126-138 1p6p d1p6pa_ A:3-13,36-44,105-114,115-125 1icm d1icma_ A:3-13,35-44,111-120,121-131 1mx7 d1mx7a_ A:5-15,38-46,113-122,124-134 1sy0 d1sy0a_ A:19-32,40-50,115-126,131-139 1jjx d1jjxa_ A:5-15,38-46,111-120,121-131 1e02 d1e02b_ B:14-25,37-46,96-107,109-120 2jn3 d2jn3a1 A:3-12,36-44,105-114,115-125 2gtf d2gtfx1 X:21-30,36-48,114-125,126-138 1dzm d1dzmb_ B:13-25,37-47,96-107,109-120 2asn d2asnx1 X:21-30,36-48,114-125,126-138 1t68 d1t68x1 X:21-31,36-48,114-125,126-138 2al0 d2al0x1 X:21-30,36-48,114-125,126-138 2ah7 d2ah7x1 X:21-30,36-48,114-125,126-138 1kt6 d1kt6a_ A:22-32,40-49,113-122,130-139 1iiu d1iiua_ A:22-32,40-49,113-122,130-139 2f73 d2f73e1 E:4-14,37-45,107-116,117-127 1dzm d1dzma_ A:13-25,37-47,96-107,109-120 1dzp d1dzpb_ B:13-25,37-47,96-107,109-120 2f73 d2f73b1 B:4-14,37-45,107-116,117-127 2ft9 d2ft9a1 A:3-13,36-44,105-114,115-125 1zry d1zrya1 A:3-13,36-44,105-114,115-125 1e02 d1e02a_ A:13-25,37-47,96-107,109-120 1e00 d1e00a_ A:13-25,37-47,96-107,109-120 2gc9 d2gc9a1 A:13-21,23-32,85-95,128-138 1b56 d1b56a_ A:8-18,41-49,114-123,124-134 2f73 d2f73d1 D:4-14,37-45,107-116,117-127 4np1 d4np1b_ B:19-32,39-50,115-126,128-139 1dc9 d1dc9a_ A:3-13,35-44,111-120,121-131 1dzp d1dzpa_ A:13-25,37-47,96-107,109-120 1lfo d1lfoa_ A:3-14,37-45,107-116,117-127 1e00 d1e00b_ B:13-25,37-47,96-107,109-120 1dzk d1dzka_ A:13-25,37-47,96-107,109-120 1kxo d1kxoa_ A:24-32,40-51,108-117,122-133 1kqw d1kqwa_ A:5-15,38-46,113-122,123-134 1bbp d1bbpd_ D:25-33,41-52,112-123,126-137 1dzj d1dzja_ A:13-25,37-47,96-107,109-120 2ju3 d2ju3a1 A:4-14,36-45,107-116,117-127 1a2d d1a2db_ B:5-15,38-46,111-119,124-131 1a2d d1a2da_ A:5-15,38-46,111-119,124-131 1e06 d1e06a_ A:13-25,37-47,96-107,109-120 1dzj d1dzjb_ B:13-25,37-47,96-107,109-120 1bbp d1bbpc_ C:24-33,41-52,112-123,126-137 1lpj d1lpja_ A:5-15,38-46,113-122,123-133 2f73 d2f73g1 G:4-14,37-45,107-116,117-127 1dzk d1dzkb_ B:13-25,37-47,96-107,109-120 1kqx d1kqxa_ A:5-15,38-46,113-122,123-133 1z24 d1z24a1 A:25-33,41-52,112-123,126-137 1bm5 d1bm5a_ A:4-14,39-47,117-126,127-137 1fdq d1fdqa_ A:5-15,38-46,111-120,121-131 1jbh d1jbha_ A:5-15,38-46,113-122,124-134 1pbo d1pboa_ A:14-26,38-48,97-108,110-122 1tw4 d1tw4a_ A:3-12,36-44,105-114,115-125 1opb d1opbc_ C:5-15,38-46,113-122,123-133 1n0s d1n0sb_ B:24-32,42-51,108-118,122-133 1eio d1eioa_ A:3-12,36-44,106-115,116-125 1a18 d1a18a_ A:5-15,38-46,111-119,124-131 1bwy d1bwya_ A:5-15,38-46,111-120,121-132 1n0s d1n0sa_ A:24-32,42-51,108-118,122-133 1mx8 d1mx8a_ A:5-15,38-46,113-122,123-133 1sy3 d1sy3a_ A:19-32,39-50,115-126,128-139 1yup d1yupa1 A:16-27,41-50,101-109,117-124 1gt5 d1gt5b_ B:14-26,38-48,97-108,110-122 1yup d1yupb1 B:16-27,41-50,101-109,117-124 1g74 d1g74a_ A:5-15,38-46,111-120,121-131 1opb d1opbd_ D:5-15,38-46,113-122,123-133 1yup d1yupg1 G:16-27,41-50,101-109,117-124 1yup d1yupd1 D:16-27,41-50,101-109,116-124 2o62 d2o62b1 B:144-155,159-173,243-254,256-269 2ftb d2ftba1 A:3-13,36-44,105-114,115-125 1o8v d1o8va_ A:5-15,38-46,112-121,122-133 1opa d1opaa_ A:5-15,38-46,113-122,123-133 1opb d1opbb_ B:5-15,38-46,113-122,123-133 1a3y d1a3yb_ B:13-25,37-47,96-107,109-120 1yup d1yupf1 F:16-27,41-50,101-109,116-124 1t8v d1t8va1 A:4-9,35-41,111-120,121-130 1fdq d1fdqb_ B:505-515,538-546,611-620,621-631 1e5p d1e5pa_ A:7-19,31-40,90-101,103-114 1gka d1gkab_ B:28-36,43-55,112-123,124-135 1gt1 d1gt1b_ B:14-26,38-48,97-108,110-122 1hn2 d1hn2b_ B:2014-2026,2038-2048,2097-2108,2110-2122 1lib d1liba_ A:5-15,38-46,111-120,121-131 1ggl d1ggla_ A:5-15,38-46,113-122,123-134 1g85 d1g85b_ B:14-26,38-48,97-108,110-122 2acp d2acpx1 X:21-31,37-48,114-125,130-138 1gt3 d1gt3b_ B:14-26,38-48,97-108,110-122 1e5p d1e5pc_ C:7-19,31-40,90-101,103-114 1obp d1obpb_ B:14-26,38-48,97-108,110-122 1vyg d1vyga_ A:5-15,38-46,112-121,122-132 1opb d1opba_ A:5-15,38-46,113-122,123-133 1opa d1opab_ B:5-15,38-46,113-122,123-133 1g85 d1g85a_ A:14-26,38-48,97-108,110-122 2ans d2ansa_ A:5-15,38-46,111-120,121-131 1hn2 d1hn2a_ A:1014-1026,1038-1048,1097-1108,1110-1122 1ab0 d1ab0a_ A:5-15,38-46,111-120,121-131 1gt3 d1gt3a_ A:14-26,38-48,97-108,110-122 1g5w d1g5wa_ A:5-15,38-46,111-120,121-132 1pmp d1pmpc_ C:5-15,38-46,111-120,121-131 1bbp d1bbpa_ A:24-33,41-52,112-124,125-137 1obp d1obpa_ A:14-26,38-48,97-108,110-122 1kt3 d1kt3a_ A:22-32,40-49,113-122,130-139 1np1 d1np1b_ B:19-32,39-50,115-126,127-139 1eal d1eala_ A:3-13,36-44,106-115,116-127 1xca d1xcaa_ A:4-14,39-47,117-126,127-137 2ans d2ansb_ B:5-15,38-46,111-120,121-131 1fe3 d1fe3a_ A:5-15,38-46,111-120,121-131 2qm9 d2qm9b1 B:5-15,38-46,111-120,121-131 2qm9 d2qm9a1 A:5-15,38-46,111-120,121-131 1tw4 d1tw4b_ B:3-13,36-44,105-114,115-125 2akq d2akqc1 C:16-27,41-50,101-109,117-124 1pmp d1pmpa_ A:5-15,38-46,111-120,121-131 1lie d1liea_ A:5-15,38-46,111-120,121-131 1cbi d1cbia_ A:4-14,39-47,116-125,126-136 1qab d1qabe_ E:22-32,41-49,114-122,130-139 1e5p d1e5pd_ D:7-19,31-40,90-101,103-114 1cbi d1cbib_ B:4-14,39-47,116-125,126-136 1exs d1exsa_ A:16-28,40-50,101-109,117-124 2fr3 d2fr3a1 A:4-14,39-47,117-126,127-137 1g7n d1g7na_ A:5-15,38-46,111-120,121-131 1gt1 d1gt1a_ A:14-26,38-48,97-108,110-122 1adl d1adla_ A:5-15,38-46,111-120,121-131 3np1 d3np1a_ A:19-32,39-50,115-126,127-139 1hmt d1hmta_ A:5-15,38-46,111-120,121-131 2ofm d2ofmx1 X:19-32,39-50,115-126,127-139 2q9s d2q9sa1 A:5-15,38-46,111-120,121-131 1hmr d1hmra_ A:5-15,38-46,111-120,121-131 1lic d1lica_ A:5-15,38-46,111-120,121-131 1crb d1crba_ A:5-15,38-46,113-122,124-134 2cbr d2cbra_ A:4-14,39-47,116-125,126-136 1lif d1lifa_ A:5-15,38-46,111-120,121-131 1koi d1koia_ A:19-32,39-50,115-126,127-139 1ywb d1ywba1 A:19-32,39-50,115-126,127-139 1tou d1toua_ A:5-15,38-46,111-120,121-131 2at8 d2at8x1 X:19-32,39-50,115-126,127-139 1cbr d1cbra_ A:4-14,39-47,116-125,126-136 1cbr d1cbrb_ B:4-14,39-47,116-125,126-136 1tvq d1tvqa_ A:3-13,36-44,105-114,115-125 1hms d1hmsa_ A:5-15,38-46,111-120,121-131 1lid d1lida_ A:5-15,38-46,111-120,121-131 1vyf d1vyfa_ A:5-15,38-46,112-121,122-132 1pmp d1pmpb_ B:5-15,38-46,111-120,121-131 2nnq d2nnqa1 A:5-15,38-46,111-120,121-131 2at5 d2at5x1 X:19-32,39-50,115-126,127-139 2hnx d2hnxa1 A:5-15,38-46,111-120,121-131 1yiv d1yiva1 A:5-15,38-46,111-120,121-131 1ywa d1ywaa1 A:19-32,39-50,115-126,127-139 1sy1 d1sy1a_ A:19-32,39-50,115-126,127-139 1mvg d1mvga_ A:3-13,36-44,105-114,115-125 1xki d1xkia_ A:14-24,37-45,95-104,109-118 1euo d1euoa_ A:21-30,37-48,114-125,126-138 2cbs d2cbsa_ A:4-14,39-47,117-126,127-137 1cbq d1cbqa_ A:4-14,39-47,117-126,127-137 1pee d1peea_ A:21-30,37-48,114-125,126-138 1tow d1towa_ A:5-15,38-46,111-120,121-131 1cbs d1cbsa_ A:4-14,39-47,117-126,127-137 1acd d1acda_ A:5-15,38-46,111-120,121-131 3cbs d3cbsa_ A:4-14,39-47,117-126,127-137 1u18 d1u18b1 B:20-33,41-51,116-127,129-140 2r56 d2r56a1 A:17-27,41-50,101-110,116-124 2r56 d2r56b1 B:16-27,41-50,101-110,116-124 1x8n d1x8na_ A:19-32,39-50,115-126,127-139 1bbp d1bbpb_ B:24-33,41-52,112-124,125-137 1qab d1qabf_ F:22-32,41-49,113-120,132-139 1ngl d1ngla_ A:29-35,53-61,118-129,130-141 1sxw d1sxwa_ A:19-32,39-50,115-126,127-139 1u18 d1u18a1 A:20-33,41-51,116-127,129-140 1alb d1alba_ A:5-15,38-46,111-120,121-131 1o1v d1o1va_ A:7-13,35-44,106-115,116-127 1bj7 d1bj7a_ A:13-25,37-45,96-107,108-119 1hqp d1hqpa_ A:13-24,37-46,96-107,109-120 1gt4 d1gt4b_ B:14-25,38-48,97-108,110-122 1gt4 d1gt4a_ A:14-25,38-48,97-108,110-122 1gt5 d1gt5a_ A:14-25,38-48,97-108,110-122 1e06 d1e06b_ B:13-24,37-47,96-107,109-120 2o62 d2o62a1 A:144-155,160-173,243-254,256-269 1np1 d1np1a_ A:19-32,40-50,115-126,127-139 1u17 d1u17b1 B:20-32,41-51,116-127,129-140 1u17 d1u17a1 A:20-33,41-51,116-127,128-140 4np1 d4np1a_ A:19-32,40-50,115-126,127-139 1pbo d1pbob_ B:14-25,38-48,97-108,110-122 1a3y d1a3ya_ A:13-24,37-47,96-107,109-120 3np1 d3np1b_ B:19-32,40-50,115-126,127-139 2np1 d2np1b_ B:19-32,40-50,115-126,127-139 1obq d1obqa_ A:32-41,48-60,114-125,127-138 1x8o d1x8oa_ A:19-32,40-50,115-126,127-139 1erx d1erxa_ A:19-32,40-50,115-126,127-139 2np1 d2np1a_ A:19-32,40-50,115-126,127-139 1s44 d1s44a_ A:32-41,48-60,114-125,127-138 1obu d1obua_ A:32-41,48-60,114-125,127-138 1obq d1obqb_ B:32-41,48-60,114-125,127-138 1obu d1obub_ B:32-41,48-60,114-125,127-138 1i4u d1i4ub_ B:32-41,48-60,114-125,127-138 1i4u d1i4ua_ A:32-41,48-60,114-125,127-138 1s44 d1s44b_ B:32-41,48-60,114-125,127-138 1s2p d1s2pa_ A:32-41,48-60,114-125,127-138 1e5p d1e5pb_ B:7-18,31-40,90-101,103-114 1s2p d1s2pb_ B:32-41,48-60,114-125,127-138 1gka d1gkaa_ A:32-41,48-60,114-125,127-138 1h91 d1h91a_ A:32-41,48-60,114-125,127-138 1h91 d1h91b_ B:32-41,48-60,114-125,127-138 1epa d1epaa_ A:12-22,37-45,96-107,108-119 1epa d1epab_ B:12-22,37-45,96-107,108-119 1epb d1epba_ A:12-22,37-45,96-107,108-119 2hmb d2hmba_ A:6-15,38-46,111-120,121-131 1jzu d1jzua_ A:11-22,33-43,94-105,106-117 2a2u d2a2ud_ D:16-26,40-49,99-110,111-122 2a2u d2a2ua_ A:16-26,40-49,99-110,111-122 2a2u d2a2ub_ B:16-26,40-49,99-110,111-122 2a2u d2a2uc_ C:16-26,40-49,99-110,111-122 1ftp d1ftpa_ A:8-16,39-46,113-122,123-133 2a2g d2a2gd_ D:16-26,40-49,99-110,111-122 2a2g d2a2gc_ C:16-26,40-49,99-110,111-122 2a2g d2a2ga_ A:16-26,40-49,99-110,111-122 2a2g d2a2gb_ B:16-26,40-49,99-110,111-122 2f73 d2f73a1 A:8-14,37-45,107-116,117-127 1df3 d1df3a_ A:17-27,40-49,99-110,111-122 2f73 d2f73f1 F:8-14,37-45,107-116,117-127 1dfv d1dfvb_ B:29-39,52-60,117-128,129-140 1r0u d1r0ua_ A:5-18,29-36,110-122,128-139 1dfv d1dfva_ A:29-39,52-60,117-128,129-140 1yp6 d1yp6a1 A:17-27,40-49,99-110,111-122 1ew3 d1ew3a_ A:34-45,58-67,118-129,130-141 1qy2 d1qy2a_ A:17-27,40-49,99-110,111-122 1epb d1epbb_ B:13-22,37-45,96-107,108-119 1znh d1znha1 A:17-27,40-49,99-110,111-122 1zne d1znea1 A:17-27,40-49,99-110,111-122 1yp7 d1yp7a1 A:16-27,40-49,99-110,111-122 1l6m d1l6mc_ C:29-39,52-60,117-128,129-140 1x89 d1x89a1 A:29-39,52-60,117-128,129-140 2dm5 d2dm5a1 A:16-27,40-49,99-110,111-122 1x89 d1x89b1 B:28-39,52-60,117-128,129-140 1x71 d1x71b1 B:28-39,52-60,117-128,129-140 2ozq d2ozqa1 A:17-27,40-49,99-110,111-122 1qy0 d1qy0a_ A:16-27,40-49,99-110,111-122 1znd d1znda1 A:16-27,40-49,99-110,111-122 1zng d1znga1 A:16-27,40-49,99-110,111-122 1qy1 d1qy1a_ A:16-27,40-49,99-110,111-122 1l6m d1l6mb_ B:29-39,52-60,117-128,129-140 1x8u d1x8ua1 A:29-39,52-60,117-128,129-140 1znl d1znla1 A:16-27,40-49,99-110,111-122 1x71 d1x71a1 A:28-39,52-60,117-128,129-140 1znk d1znka1 A:16-27,40-49,99-110,111-122 1l6m d1l6ma_ A:28-39,52-60,117-128,129-140 1x71 d1x71c1 C:28-39,52-60,117-128,129-140 1qqs d1qqsa_ A:29-39,52-60,117-128,129-140 1i05 d1i05a_ A:34-45,58-67,117-128,129-140 1i06 d1i06a_ A:34-45,58-67,117-128,129-140 1x8u d1x8ub1 B:28-39,52-60,117-128,129-140 1x8u d1x8uc1 C:29-39,52-60,117-128,129-140 1i04 d1i04a_ A:34-45,58-67,117-128,129-140 1x89 d1x89c1 C:29-39,52-60,117-128,129-140 1gm6 d1gm6a_ A:19-30,43-52,102-113,114-125 1mdc d1mdca_ A:6-14,37-45,110-119,124-131 1kgl d1kgla_ A:9-15,38-46,113-122,124-134 1jv4 d1jv4a_ A:16-27,40-49,99-110,111-122 1ftp d1ftpb_ B:8-16,39-47,113-122,123-133 1ggl d1gglb_ B:9-15,38-46,113-122,124-134 95. b.20.1 ENV polyprotein, receptor-binding domain ENV polyprotein, receptor-binding domain sandwich; 9 strands in 2 sheets; greek-key; contains a few helices in loop regions 1lcs d1lcsa_ A:7-18,19-31,179-187,192-205 1lcs d1lcsb_ B:6-18,19-31,179-187,192-205 1aol d1aola_ A:10-20,26-33,202-214,215-230 1aol d1aola_ A:10-20,22-26,202-214,215-230 97. c.19.1 FabD/lysophospholipase-like FabD/lysophospholipase-like core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 432156; strand 4 is antiparallel to the rest 1oxw d1oxwb_ B:1148-1157,1160-1167,1196-1204,1206-1215 1oxw d1oxwc_ C:2148-2157,2160-2167,2196-2204,2206-2215 1oxw d1oxwa_ A:148-157,160-167,196-204,206-215 1cjy d1cjya2 A:325-334,344-350,486-491,543-549 1cjy d1cjyb2 B:1325-1334,1344-1350,1486-1491,1543-1549 99. b.161.1 PTSIIA/GutA-like PTSIIA/GutA-like barrel, closed; n=8, S=12; mixed sheet; two overside connections; duplication: consists of two intertwinned structural repeats 2f9h d2f9ha1 A:3-13,39-44,54-61,117-123 2f9h d2f9hb1 B:5-14,37-44,54-61,116-123 100. e.73.1 CV3147-like CV3147-like 2 domains; d1: [alpha/beta; 3 layers, a/b/a, mixed beta-sheet of 8 strands, order 12543876, strands 1, 7 and 8 are antiparallel to the rest]; d2: [pseudo beta-barrel of 6 strands, meander] 2o3i d2o3ib1 B:259-269,282-289,317-325,352-360 2o3i d2o3ia1 A:259-269,282-289,317-325,352-360 102. e.76.1 Viral glycoprotein ectodomain-like Viral glycoprotein ectodomain-like complex fold; contains three rigid, mostly-beta domains and an alpha-helical region, acting as a conformatiomal switch ("fusion stalk") 2gum d2guma1 A:142-153,365-373,439-445,447-458 2gum d2gumc1 C:142-153,365-373,439-445,447-458 2gum d2gumb1 B:142-153,365-373,439-445,447-458 2j6j d2j6ja1 A:36-46,181-191,225-232,234-240 2cmz d2cmzc1 C:36-47,180-191,225-232,234-240 2cmz d2cmza1 A:36-47,180-191,225-232,234-240 2cmz d2cmzb1 B:36-47,180-191,225-232,234-240 2gum d2guma1 A:142-153,373-381,439-445,447-458 2gum d2gumc1 C:142-153,373-381,439-445,447-458 2gum d2gumb1 B:142-153,373-381,439-445,447-458 2gum d2gumc1 C:156-177,262-281,339-348,349-356 2gum d2gumb1 B:156-177,262-281,339-348,349-356 2gum d2guma1 A:156-177,262-281,339-348,349-356 2gum d2guma1 A:142-153,373-381,432-436,447-458 2gum d2gumc1 C:142-153,373-381,432-436,447-458 2gum d2gumb1 B:142-153,373-381,432-436,447-458 2gum d2gumc1 C:156-177,178-192,244-250,262-281 2gum d2gumb1 B:156-177,178-192,245-250,262-281 2gum d2guma1 A:156-177,178-192,245-250,262-281 2cmz d2cmza1 A:52-72,118-139,156-160,165-170 2j6j d2j6ja1 A:53-71,118-139,156-161,165-171 2cmz d2cmzc1 C:52-72,117-139,156-160,165-170 2cmz d2cmzb1 B:52-72,117-139,156-160,165-170 103. b.49.1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like barrel, closed; n=6, S=8; greek-key 1cow d1cowb2 B:26-36,37-43,50-56,86-91 1cow d1cowc2 C:26-36,37-43,50-56,86-91 1bmf d1bmfb2 B:26-36,37-43,50-56,86-91 1bmf d1bmfc2 C:26-36,37-43,50-56,86-91 1efr d1efrb2 B:26-36,37-43,50-56,86-91 1efr d1efrc2 C:26-36,37-43,50-56,86-91 1w0k d1w0ka2 A:26-36,37-43,50-56,86-91 1e1r d1e1rc2 C:26-36,37-43,50-56,86-91 1cow d1cowa2 A:26-36,37-43,50-56,84-91 1bmf d1bmfa2 A:26-36,37-43,50-56,84-91 1nbm d1nbmb2 B:26-36,37-43,50-56,84-91 2jdi d2jdic2 C:26-36,37-43,50-56,84-91 2ck3 d2ck3c2 C:26-36,37-43,50-56,84-91 1w0k d1w0kd2 D:9-18,19-25,32-39,73-78 1h8e d1h8ed2 D:9-18,19-25,32-39,73-78 2jdi d2jdib2 B:26-36,37-43,50-56,84-91 1w0j d1w0jf2 F:9-18,19-25,32-39,73-78 1e1r d1e1ra2 A:26-36,37-43,50-56,84-91 1sky d1skyb2 B:26-36,37-43,50-56,84-91 1mab d1mabb2 B:9-18,19-25,32-40,71-78 1h8h d1h8ha2 A:26-36,37-43,50-56,84-91 1w0j d1w0je2 E:9-18,19-25,32-39,73-78 1nbm d1nbma2 A:26-36,37-43,50-56,84-91 1e1q d1e1qb2 B:26-35,38-43,50-56,86-91 1e79 d1e79c2 C:26-36,37-43,50-56,84-91 1e1q d1e1qa2 A:26-36,37-43,50-56,84-91 1e79 d1e79b2 B:26-35,38-43,50-56,86-91 1h8e d1h8eb2 B:26-35,38-43,50-56,86-91 1ohh d1ohha2 A:26-36,37-43,50-56,84-91 1w0k d1w0kc2 C:26-36,37-43,50-56,84-91 1ohh d1ohhc2 C:26-36,37-43,50-56,84-91 1sky d1skye2 E:2-11,12-18,26-36,72-80 1h8e d1h8ec2 C:26-36,37-43,50-56,84-91 1nbm d1nbmc2 C:26-36,37-43,50-56,84-91 1w0j d1w0jc2 C:26-36,37-43,50-56,84-91 1h8e d1h8ea2 A:26-36,37-43,50-56,84-90 1w0j d1w0ja2 A:26-36,37-43,50-56,84-90 1cow d1cowd2 D:9-18,19-25,34-39,71-78 1h8h d1h8hc2 C:26-36,37-43,50-56,84-91 1e1q d1e1qc2 C:26-36,37-43,50-56,84-91 1e79 d1e79a2 A:26-36,37-43,50-56,84-90 2jdi d2jdia2 A:26-36,37-43,50-56,84-90 1efr d1efra2 A:26-36,37-43,50-56,84-90 2ck3 d2ck3a2 A:26-36,37-43,50-56,84-90 1bmf d1bmff2 F:9-18,19-25,32-39,72-78 1e1q d1e1qf2 F:9-18,19-25,32-39,72-78 1h8e d1h8ee2 E:9-18,19-25,32-39,72-78 1kmh d1kmhb2 B:19-28,29-35,43-50,88-94 1fx0 d1fx0b2 B:19-28,29-35,43-50,89-94 1efr d1efrf2 F:9-18,19-25,32-39,72-78 1ohh d1ohhb2 B:26-35,38-43,50-56,84-91 1e1r d1e1rb2 B:26-35,38-43,50-56,84-91 1w0j d1w0jb2 B:26-35,38-43,50-56,84-91 1h8h d1h8hb2 B:26-35,38-43,50-56,84-91 2ck3 d2ck3b2 B:26-35,37-43,50-56,84-91 1w0k d1w0kb2 B:26-35,38-43,50-56,84-91 1efr d1efrd2 D:9-18,19-25,32-39,71-79 1nbm d1nbmd2 D:9-18,19-26,32-39,71-78 2f43 d2f43b2 B:9-18,19-25,32-39,71-78 1e79 d1e79f2 F:9-18,19-25,32-39,71-78 1ohh d1ohhd2 D:9-18,19-25,32-39,71-78 2jdi d2jdid2 D:9-18,19-25,32-39,71-78 1h8h d1h8hf2 F:9-18,19-25,32-39,71-78 1ohh d1ohhe2 E:9-18,19-25,32-39,71-78 1e79 d1e79e2 E:9-18,19-25,32-39,71-78 1cow d1cowf2 F:9-18,19-25,32-39,72-79 1w0k d1w0ke2 E:9-18,19-25,32-39,71-78 2ck3 d2ck3d2 D:9-18,19-25,32-39,71-78 2ck3 d2ck3f2 F:9-18,19-25,32-39,71-78 2jdi d2jdif2 F:9-18,19-25,32-39,71-78 2ck3 d2ck3e2 E:9-18,19-25,32-39,71-78 1w0k d1w0kf2 F:9-18,19-25,32-39,71-78 2jdi d2jdie2 E:9-18,19-25,32-39,71-78 1e1q d1e1qd2 D:9-18,19-25,32-39,71-78 1h8e d1h8ef2 F:9-18,19-25,32-39,71-78 1e79 d1e79d2 D:9-18,19-25,32-39,71-78 1h8h d1h8hd2 D:9-18,19-25,32-39,71-78 1w0j d1w0jd2 D:9-18,19-25,32-39,71-78 1e1r d1e1rd2 D:9-18,19-25,32-39,71-78 1e1r d1e1rf2 F:9-18,19-25,32-39,71-78 1e1q d1e1qe2 E:9-18,19-25,32-39,71-78 1h8h d1h8he2 E:9-18,19-25,32-39,71-78 1e1r d1e1re2 E:9-18,19-25,32-39,71-78 1efr d1efre2 E:9-18,19-25,32-39,71-78 1ohh d1ohhf2 F:10-18,19-25,32-39,72-78 2f43 d2f43a2 A:26-36,37-43,50-56,86-94 1bmf d1bmfe2 E:9-18,19-25,32-39,71-78 1cow d1cowe2 E:9-18,19-25,32-39,71-78 1nbm d1nbme2 E:9-18,19-25,32-39,71-78 1bmf d1bmfd2 D:9-18,19-25,32-39,71-78 1mab d1maba2 A:26-36,37-43,50-56,86-94 1nbm d1nbmf2 F:10-18,19-25,32-39,71-78 104. e.61.1 ImpE-like ImpE-like consists of two domains; d1: right-handed superhelix of five helices; d2: pseudo beta-barrel containing structurally similar part to the "Histone-like" proteins from archaea (scop_fa 54161) 1zbp d1zbpa1 A:133-138,139-144,172-179,256-261 1zbp d1zbpa1 A:154-161,163-170,188-197,200-208 105. b.86.1 Hedgehog/intein (Hint) domain duplication: contains two intertwined structural repeats ! Hedgehog/intein (Hint) domain complex fold made of five beta-hairpin units and a b-ribbon arc 1gpp d1gppa_ A:175-410,412-420,443-447,449-453 1dfa d1dfaa1 A:175-180,416-420,442-447,449-454 1ef0 d1ef0b1 B:175-180,416-420,442-447,449-454 1vde d1vdeb1 B:175-180,416-420,442-447,449-454 1vde d1vdea1 A:175-180,416-420,442-447,449-454 1um2 d1um2a1 A:458-463,699-703,725-730,732-737 1jva d1jvaa1 A:458-463,699-703,725-730,732-737 1dq3 d1dq3a1 A:81-88,90-97,121-125,416-426 1um2 d1um2b1 B:458-463,699-703,725-730,732-737 1jva d1jvab1 B:458-463,699-703,725-730,732-737 1ef0 d1ef0a1 A:175-180,416-420,442-447,449-454 1lws d1lwsa1 A:175-180,416-420,442-447,449-454 1lwt d1lwta1 A:175-180,416-420,442-447,449-454 1mi8 d1mi8a_ A:53-62,64-70,91-97,117-131 1at0 d1at0a_ A:353-361,362-377,389-394,395-400 1am2 d1am2a_ A:75-84,85-94,187-192,193-198 1am2 d1am2a_ A:46-64,66-72,99-107,160-173 1at0 d1at0a_ A:308-318,320-326,353-361,362-377 111. d.289.1 WWE domain WWE domain beta(2)-alpha-beta(4); antiparallel folded beta-sheet (half-barrel), order 216543 1ujr d1ujra_ A:28-37,38-43,78-83,88-98 2a90 d2a90a2 A:130-137,145-149,185-191,195-204 2a90 d2a90a1 A:44-54,55-60,97-102,114-122 112. c.8.8 Putative cyclase contains mixed beta-sheet barrel, closed n=7, S=10 ! The "swivelling" beta/beta/alpha domain 3 layers: b/b/a; the central sheet is parallel, and the other one is antiparallel; there are some variations in topology ! this domain is thought to be mobile in most multi-domain proteins known to contain it 1r61 d1r61b_ B:48-52,163-168,176-186,192-203 2b0a d2b0aa1 A:43-47,144-149,160-169,175-185 1r61 d1r61a_ A:48-52,163-168,176-186,192-203 113. b.43.4 Riboflavin synthase domain-like Reductase/isomerase/elongation factor common domain barrel, closed; n=6, S=10; greek-key 1a8p d1a8pa1 A:3-15,18-26,36-45,85-93 1j9z d1j9za1 A:281-292,299-307,317-323,507-516 1ja1 d1ja1a1 A:281-292,299-307,317-323,507-516 1fdr d1fdra1 A:3-16,18-26,35-42,84-92 1ja1 d1ja1b1 B:281-292,299-307,317-323,507-516 1amo d1amob1 B:281-293,299-307,317-323,507-516 1amo d1amoa1 A:281-293,299-307,317-323,507-516 1ja0 d1ja0b1 B:281-292,299-307,317-323,507-516 1ja0 d1ja0a1 A:281-292,299-307,317-323,507-516 1j9z d1j9zb1 B:281-292,299-307,317-323,507-516 1gvh d1gvha2 A:152-164,166-175,187-194,241-250 1i7p d1i7pa1 A:41-53,55-63,76-85,137-146 1ddg d1ddgb1 B:236-248,255-263,273-279,432-442 1ddg d1ddga1 A:236-248,255-263,273-279,432-442 1umk d1umka1 A:41-53,55-63,76-85,137-146 1qx4 d1qx4a1 A:41-53,55-63,76-85,135-146 1qx4 d1qx4b1 B:41-53,55-63,76-85,135-146 1w87 d1w87a1 A:20-32,39-47,58-63,128-137 1tll d1tllb1 B:2992-3004,3011-3019,3030-3036,3222-3231 1f20 d1f20a1 A:992-1004,1011-1019,1030-1036,1222-1231 1ddi d1ddia1 A:236-247,255-263,273-279,432-442 1qfj d1qfja1 A:1-13,17-25,34-41,84-93 1qfj d1qfjd1 D:1-14,16-25,34-41,84-93 2bsa d2bsaa1 A:20-32,39-47,58-63,128-137 1gaq d1gaqa1 A:37-48,56-66,74-79,143-152 2bmw d2bmwa1 A:20-32,39-47,58-63,128-137 1qh0 d1qh0a1 A:20-31,39-47,58-63,128-137 1h42 d1h42a1 A:20-32,39-47,58-63,128-137 1ogj d1ogja1 A:20-32,39-47,58-63,128-137 1ogi d1ogia1 A:20-32,39-47,58-63,128-137 1quf d1qufa1 A:20-32,39-47,58-64,126-137 1qfz d1qfzb1 B:531-542,550-560,568-573,637-646 1qfy d1qfyb1 B:531-542,550-560,568-573,637-646 1qfj d1qfjc1 C:1-14,16-25,34-40,84-93 1qgz d1qgza1 A:20-32,39-47,58-63,128-137 1e63 d1e63a1 A:20-31,39-47,58-63,128-137 1w87 d1w87b1 B:20-32,39-47,58-63,126-137 1i8d d1i8db2 B:104-113,119-127,138-143,176-184 1cnf d1cnfa1 A:12-24,26-35,47-56,106-117 1qfj d1qfjb1 B:1-14,16-25,34-40,84-93 1ndh d1ndha1 A:13-25,27-35,48-57,107-118 1go2 d1go2a1 A:20-31,39-47,58-63,126-137 1w35 d1w35a1 A:20-32,39-47,58-63,126-137 1b2r d1b2ra1 A:20-32,39-47,58-63,126-137 1gr1 d1gr1a1 A:20-31,39-47,58-63,126-137 1qgy d1qgya1 A:20-32,39-47,58-63,126-137 1w34 d1w34a1 A:20-32,39-47,58-63,126-137 1gjr d1gjra1 A:20-32,39-47,58-63,126-137 2cnd d2cnda1 A:11-24,26-35,47-56,108-117 1que d1quea1 A:20-32,39-47,58-63,126-137 1bqe d1bqea1 A:20-31,39-47,58-63,126-137 1frn d1frna1 A:37-48,56-64,74-79,141-152 1frq d1frqa1 A:37-48,56-66,74-79,141-152 1krh d1krha1 A:107-119,122-131,143-149,191-202 1qg0 d1qg0a1 A:31-42,50-60,68-73,135-146 1bx1 d1bx1a1 A:37-48,56-66,74-79,141-152 1qfz d1qfza1 A:31-42,50-60,68-73,135-146 1bjk d1bjka1 A:20-31,39-47,58-63,126-137 1qg0 d1qg0b1 B:1031-1042,1050-1060,1068-1073,1135-1146 1qfy d1qfya1 A:31-42,50-60,68-73,135-146 1ep1 d1ep1b1 B:4-16,19-27,38-43,90-99 1qga d1qgab1 B:531-542,550-560,568-573,635-646 1qga d1qgaa1 A:31-42,50-60,68-73,135-146 1bx0 d1bx0a1 A:37-48,56-66,74-79,141-152 1fnb d1fnba1 A:37-48,56-64,74-79,141-152 1gaq d1gaqc1 C:37-48,56-66,74-79,141-152 1krh d1krhb1 B:107-119,122-131,143-149,191-202 1e64 d1e64a1 A:20-32,39-47,58-63,126-137 1e62 d1e62a1 A:20-31,39-47,58-63,126-137 1fnc d1fnca1 A:37-48,56-64,74-79,141-152 1fnd d1fnda1 A:37-48,56-64,74-79,141-152 1gaw d1gawb1 B:37-48,56-66,74-79,141-152 1gaw d1gawa1 A:37-48,56-66,74-79,141-152 1ewy d1ewyb1 B:20-32,39-47,58-63,126-137 1i8d d1i8dc1 C:7-19,20-28,40-45,79-87 1i8d d1i8db1 B:7-19,20-28,40-45,78-87 1sm4 d1sm4a1 A:85-97,104-114,122-127,189-200 1sm4 d1sm4b1 B:1085-1096,1104-1114,1122-1127,1189-1200 1cne d1cnea1 A:11-24,26-35,47-56,106-117 1ep2 d1ep2b1 B:4-16,19-27,38-43,90-99 1kzl d1kzla2 A:103-116,117-126,136-143,178-185 1jb9 d1jb9a1 A:33-44,52-62,70-75,143-154 1ewy d1ewya1 A:20-31,39-47,58-63,126-137 1pkv d1pkvb_ B:7-18,21-28,38-45,79-87 1tvc d1tvca1 A:10-22,25-34,48-54,100-110 1kzl d1kzla1 A:7-14,21-29,40-45,78-87 1hze d1hzeb_ B:7-19,20-28,40-45,78-88 1hze d1hzea_ A:7-19,20-28,40-45,78-88 1i8d d1i8da1 A:7-19,20-28,38-45,78-87 1pkv d1pkva_ A:8-19,20-28,38-45,79-87 1ep3 d1ep3b1 B:4-16,19-27,38-43,88-99 1i8d d1i8dc2 C:103-110,121-126,136-143,177-184 1i8d d1i8da2 A:105-116,117-126,136-143,178-184 116. b.111.1 Small protein B (SmpB) Small protein B (SmpB) barrel, closed; n=6, S=8, greek-key, partial similarity to the OB-fold 2ob7 d2ob7c1 C:23-30,82-87,106-115,116-124 1p6v d1p6va_ A:22-30,82-87,104-115,116-128 2ob7 d2ob7b1 B:22-30,82-87,104-115,116-128 2czj d2czjc1 C:17-25,75-81,98-109,111-123 1wjx d1wjxa_ A:17-24,74-80,97-108,110-121 2czj d2czjg1 G:17-25,75-81,98-109,111-123 1j1h d1j1ha_ A:16-24,77-81,103-109,111-122 1p6v d1p6vc_ C:23-30,79-87,104-115,116-127 2czj d2czja1 A:18-25,73-81,98-109,111-122 2czj d2czje1 E:18-25,73-81,98-109,111-122 1zc8 d1zc8k1 K:22-30,80-87,104-115,116-128 1k8h d1k8ha_ A:22-30,80-87,104-115,116-128 122. d.182.1 Baseplate structural protein gp11 Baseplate structural protein gp11 unusual fold; trimer 1el6 d1el6a_ A:80-93,154-161,170-174,175-189 1el6 d1el6b_ B:80-93,154-161,170-174,175-189 1el6 d1el6c_ C:80-93,154-161,170-174,175-189 123. b.152.1 Flagellar hook protein flgE Flagellar hook protein flgE consists of two different domains; d1: [complex fold made of bifurcated beta-sheets]; d2 (inserted into d1): [beta-sandwich; 8 strands in 2 sheets] 1wlg d1wlgb_ B:80-87,89-95,105-110,112-120 1wlg d1wlga_ A:80-87,89-95,105-110,112-120 125. d.22.1 GFP-like GFP-like beta-sheet folds into a barrel (n=11, S=14) around the central helix 1eml d1emla_ A:91-101,103-116,159-172,174-188 2rh7 d2rh7d1 D:90-100,102-114,155-168,170-184 2rh7 d2rh7c1 C:90-100,102-114,155-168,170-184 2rh7 d2rh7a1 A:90-100,102-114,155-168,170-184 2rh7 d2rh7b1 B:90-100,102-115,155-168,170-184 1uis d1uisa_ A:87-97,99-112,152-165,167-181 1g7k d1g7ka_ A:90-100,102-115,155-168,170-184 1jby d1jbya_ A:91-101,103-116,159-172,174-188 1uis d1uisb_ B:87-97,99-112,152-165,167-181 1ggx d1ggxb_ B:90-100,102-115,155-168,170-184 1f0b d1f0ba_ A:91-101,103-116,159-172,174-188 1g7k d1g7kb_ B:90-100,102-115,155-168,170-184 1mov d1mova_ A:90-100,102-115,155-168,170-184 1rrx d1rrxa_ A:90-96,103-116,159-163,174-189 1g7k d1g7kd_ D:90-100,102-115,155-168,170-184 1ggx d1ggxa_ A:90-100,102-115,155-168,170-184 1xqm d1xqma_ A:87-97,99-112,152-165,167-181 1rmp d1rmpa_ A:91-101,103-116,159-172,174-188 1mou d1moua_ A:90-100,102-115,155-168,170-184 1g7k d1g7kc_ C:90-100,102-115,155-168,170-184 1cv7 d1cv7a_ A:90-101,103-116,159-172,174-189 1f09 d1f09a_ A:90-101,103-116,159-172,174-189 1emb d1emba_ A:90-101,103-116,159-172,174-189 1b9c d1b9cb_ B:89-101,103-116,159-172,174-189 1ema d1emaa_ A:90-101,103-116,159-172,174-189 2yfp d2yfpa_ A:90-101,103-116,159-172,174-189 1qyf d1qyfa_ A:89-101,103-116,159-172,174-189 1kyp d1kypa_ A:89-101,103-116,159-172,174-189 1b9c d1b9cc_ C:89-101,103-116,159-172,174-189 1jc0 d1jc0b_ B:89-101,103-116,159-172,174-189 1rrx d1rrxa_ A:97-101,103-116,164-172,174-189 1b9c d1b9cd_ D:89-101,103-116,159-172,174-189 1jc0 d1jc0a_ A:89-101,103-116,159-172,174-189 1jc1 d1jc1a_ A:89-101,103-116,159-172,174-189 1hcj d1hcjc_ C:89-101,103-116,159-172,174-189 1hcj d1hcjd_ D:89-101,103-116,159-172,174-189 1hcj d1hcja_ A:89-101,103-116,159-172,174-189 1kyr d1kyra_ A:89-101,103-116,159-172,174-189 1oxd d1oxda_ A:89-101,103-116,159-172,174-189 1oxe d1oxea_ A:89-101,103-116,159-172,174-189 1jc1 d1jc1b_ B:89-101,103-116,159-172,174-189 1q4e d1q4ea_ A:89-101,103-116,159-172,174-189 1s6z d1s6za_ A:89-101,103-116,159-172,174-189 1jbz d1jbza_ A:89-101,103-116,159-172,174-189 1q73 d1q73a_ A:89-101,103-116,159-172,174-189 1rmm d1rmma_ A:89-101,103-116,159-172,174-189 1q4c d1q4ca_ A:89-101,103-116,159-172,174-189 1emg d1emga_ A:89-101,103-116,159-172,174-189 1q4a d1q4aa_ A:89-101,103-116,159-172,174-189 1gfl d1gflb_ B:89-101,103-116,159-172,174-189 1emf d1emfa_ A:89-101,103-116,159-172,174-189 1jc0 d1jc0c_ C:89-101,103-116,159-172,174-189 1q4d d1q4da_ A:89-101,103-116,159-172,174-189 1qyq d1qyqa_ A:89-101,103-116,159-172,174-189 1gfl d1gfla_ A:89-101,103-116,159-172,174-189 1emc d1emcc_ C:89-101,103-116,159-172,174-189 1q4b d1q4ba_ A:89-101,103-116,159-172,174-189 1emc d1emcd_ D:89-101,103-116,159-172,174-189 1emc d1emcb_ B:89-101,103-116,159-172,174-189 1c4f d1c4fa_ A:89-101,103-116,159-172,174-189 1rm9 d1rm9a_ A:89-101,103-116,159-172,174-189 1bfp d1bfpa_ A:89-101,103-116,158-172,174-189 1qxt d1qxta_ A:89-101,103-116,159-172,174-188 1b9c d1b9ca_ A:89-101,103-116,159-172,174-188 1qy3 d1qy3a_ A:89-101,103-116,159-172,174-188 1kys d1kysa_ A:89-101,103-116,159-172,174-188 1kp5 d1kp5b_ B:399-411,413-426,469-482,484-498 2emn d2emna_ A:89-101,103-116,159-172,174-188 1jc1 d1jc1c_ C:89-101,103-116,159-172,174-188 1hcj d1hcjb_ B:89-101,103-116,159-172,174-188 1yfp d1yfpb_ B:89-101,103-116,159-172,174-188 1yfp d1yfpa_ A:89-101,103-116,159-172,174-188 1kp5 d1kp5a_ A:99-111,113-126,169-182,184-198 1h6r d1h6rb_ B:89-101,103-116,159-172,174-188 1eme d1emea_ A:89-101,103-116,159-172,174-188 1h6r d1h6ra_ A:89-101,103-116,159-172,174-188 1emk d1emka_ A:89-101,103-116,159-172,174-188 1emc d1emca_ A:89-101,103-116,159-172,174-188 1myw d1mywa_ A:89-101,103-116,159-172,174-188 1rmo d1rmoa_ A:89-101,103-116,159-172,174-188 1emm d1emma_ A:89-101,103-116,159-172,174-188 1qyo d1qyoa_ A:89-101,103-116,159-172,174-188 2emd d2emda_ A:89-101,103-116,159-172,174-188 1oxf d1oxfa_ A:89-101,103-116,159-172,174-188 1huy d1huya_ A:89-101,103-116,159-172,174-188 1h6r d1h6rc_ C:89-101,103-116,159-172,174-188 1gl4 d1gl4a1 A:484-495,500-512,549-564,572-585 2emo d2emoa_ A:89-101,103-116,159-172,174-188 1ggx d1ggxc_ C:88-100,102-115,155-168,170-184 1ggx d1ggxd_ D:88-100,102-115,155-168,170-184 1h4u d1h4ua1 A:484-495,500-512,549-564,571-585 126. b.34.11 Prokaryotic SH3-related domain SH3-like barrel barrel, partly opened; n*=4, S*=8; meander ! the last strand is interrupted by a turn of 3-10 helix 1m9s d1m9sa2 A:410-414,422-427,445-452,453-459 1m9s d1m9sa3 A:488-493,500-506,524-533,534-542 1m9s d1m9sa4 A:570-574,582-587,605-614,615-623 2fg0 d2fg0a1 A:20-27,33-41,53-61,62-70 2fg0 d2fg0b1 B:20-27,33-41,53-61,62-70 1xov d1xova1 A:190-196,203-210,222-229,230-237 2evr d2evra1 A:20-27,33-41,53-61,62-70 1xov d1xova1 A:263-268,276-281,295-301,303-309 128. d.313.1 Prenyltransferase-like the barrel channel harbours the substrate-binding site ! Antiparallel beta/alpha barrel (PT-barrel) tandem repeat of five alpha(2)-beta(2) motifs; antiparallel beta-sheet barrel, closed; n=10, S=10; order 123456789A; there is a channel along the barrel axis 1zdw d1zdwa1 A:47-54,61-68,269-278,279-290 1zdy d1zdya1 A:47-55,61-68,269-278,279-290 1zcw d1zcwa1 A:47-55,61-68,269-278,279-290 1zb6 d1zb6a1 A:47-55,61-68,269-278,279-290 129. d.63.1 CYTH-like phosphatases CYTH-like phosphatases duplication of beta-alpha-beta(3) motif: antiparallel beta sheet forms wide barrel (n=8, S=16) with a channel running through it 1d8h d1d8hc_ C:303-312,424-436,466-478,487-498 1d8i d1d8ic_ C:303-312,424-436,466-478,487-498 1d8i d1d8ia_ A:303-312,424-436,466-478,487-498 1d8i d1d8ib_ B:303-312,424-436,466-478,487-498 1d8h d1d8ha_ A:303-312,424-436,466-478,487-498 1d8h d1d8hb_ B:303-312,424-436,466-478,487-498 1yem d1yema_ A:1-9,68-79,109-118,120-130 1yem d1yemb_ B:1-9,68-79,109-118,120-130 2aca d2acaa1 A:10-19,83-92,122-131,133-144 130. b.61.7 Extracellular hemoglobin linker subunit, receptor domain Streptavidin-like barrel, closed; n=8, S=10; meander 2gtl d2gtln1 N:109-119,125-137,203-213,214-226 2gtl d2gtlm1 M:107-119,125-137,202-212,213-225 2gtl d2gtlo1 O:105-116,123-134,198-208,209-221 132. b.54.1 Core binding factor beta, CBF Core binding factor beta, CBF barrel, closed; n=6, S=10; meander; capped at both ends by alpha-helices 2jhb d2jhba_ A:25-32,53-61,107-119,120-126 1e50 d1e50d_ D:22-30,51-59,105-116,119-128 1h9d d1h9dd_ D:22-30,51-59,105-116,119-128 1io4 d1io4d_ D:22-30,51-59,105-116,119-128 1h9d d1h9db_ B:22-30,51-59,105-116,119-128 1e50 d1e50b_ B:22-30,51-59,105-116,119-128 1cl3 d1cl3a_ A:22-30,51-58,105-116,119-127 135. b.44.2 Aminomethyltransferase beta-barrel domain Elongation factor/aminomethyltransferase common domain barrel, closed; n=6, S=10; greek-key 1vlo d1vloa1 A:279-287,322-331,336-343,344-353 1v5v d1v5vb1 B:312-322,351-362,367-376,377-385 1pj7 d1pj7a1 A:743-752,783-794,798-807,808-816 1pj5 d1pj5a1 A:743-752,783-794,798-807,808-816 1vly d1vlya1 A:245-254,288-298,304-308,314-318 1v5v d1v5va1 A:312-322,352-362,367-376,377-385 1wos d1wosa1 A:278-287,318-328,332-341,343-351 1woo d1wooa1 A:278-287,318-328,332-341,343-351 1wop d1wopa1 A:278-287,318-328,332-341,343-351 1pj6 d1pj6a1 A:743-752,783-794,800-807,808-816 1wor d1wora1 A:278-287,318-328,334-341,343-351 136. d.170.2 A heparin-binding domain SRCR-like unusual fold; disulfide-rich; core: beta-x-alpha-beta-loop-beta 1mwp d1mwpa_ A:32-36,42-48,81-88,114-120 139. e.5.1 Heme-dependent catalase-like Heme-dependent catalase-like contains an (8,10) beta-barrel and an all-alpha domain 1f4j d1f4jc_ C:77-89,103-116,274-285,310-321 1dgg d1dggb_ B:77-89,103-116,274-285,310-321 1dgg d1dgga_ A:77-89,103-116,274-285,310-321 1f4j d1f4jb_ B:77-89,103-116,274-285,310-321 1dgb d1dgbc_ C:77-89,103-116,274-285,310-321 1dgf d1dgfa_ A:77-89,103-116,274-285,310-321 1dgh d1dgha_ A:77-89,103-116,274-285,310-321 1dgf d1dgfb_ B:77-89,103-116,274-285,310-321 1dgf d1dgfd_ D:77-89,103-116,274-285,310-321 7cat d7catb_ B:76-88,102-115,273-284,309-320 7cat d7cata_ A:76-88,102-115,273-284,309-320 8cat d8catb_ B:76-88,102-115,273-284,309-320 4blc d4blcc_ C:76-88,102-115,273-284,309-320 1dgf d1dgfc_ C:77-89,103-116,274-285,310-321 1dgh d1dghc_ C:77-89,103-116,274-285,310-321 1a4e d1a4eb_ B:72-84,98-111,271-282,307-318 1dgg d1dggd_ D:77-89,103-116,274-285,310-321 1a4e d1a4ed_ D:72-84,98-111,271-282,307-318 1dgh d1dghb_ B:77-89,103-116,274-285,310-321 1th2 d1th2b1 B:76-88,102-115,273-284,309-320 1dgg d1dggc_ C:77-89,103-116,274-285,310-321 1th4 d1th4b1 B:78-88,102-115,273-284,309-320 1dgb d1dgbd_ D:77-89,103-116,274-285,310-321 2cag d2caga_ A:56-68,82-95,253-265,289-300 1th4 d1th4a1 A:76-88,102-115,273-284,309-320 8cat d8cata_ A:76-88,103-115,273-284,309-320 1th2 d1th2c1 C:76-88,102-115,273-284,309-320 1dgh d1dghd_ D:77-89,104-116,274-285,310-321 1m85 d1m85a_ A:56-68,82-95,253-265,289-300 1tgu d1tgud1 D:76-88,102-115,273-284,309-320 1dgb d1dgbb_ B:77-89,103-116,274-285,310-321 1e93 d1e93a_ A:56-68,82-95,253-265,289-300 1tgu d1tgua1 A:76-88,102-115,273-284,309-320 1mqf d1mqfa_ A:56-68,82-95,253-265,289-300 4blc d4blcd_ D:76-88,103-115,273-284,309-320 1tgu d1tguc1 C:76-88,102-115,273-284,309-320 1th2 d1th2a1 A:76-88,102-115,273-284,309-320 1qqw d1qqwd_ D:77-89,103-116,274-285,310-321 1ggf d1ggfb2 B:130-141,159-169,331-342,367-378 1a4e d1a4ea_ A:72-84,100-111,271-282,307-318 1gge d1ggec2 C:130-141,159-169,331-342,367-378 1ggj d1ggjb2 B:130-141,159-169,331-342,367-378 1m7s d1m7sb_ B:80-91,105-118,276-287,310-321 1ggh d1gghc2 C:130-141,159-169,331-342,367-378 1p7y d1p7yb2 B:130-141,159-169,331-342,367-378 1iph d1iphd2 D:130-141,159-169,331-342,367-378 1iph d1iphc2 C:130-141,159-169,331-342,367-378 1iph d1iphb2 B:130-141,159-169,331-342,367-378 1iph d1ipha2 A:130-141,159-169,331-342,367-378 1th2 d1th2d1 D:76-88,104-115,273-284,309-320 1ggj d1ggjc2 C:130-141,159-169,331-342,367-378 1cf9 d1cf9d2 D:130-141,159-169,331-342,367-378 1h7k d1h7ka_ A:56-68,82-95,253-265,289-300 1th3 d1th3a1 A:76-88,102-115,273-284,309-320 1gg9 d1gg9c2 C:130-141,159-169,331-342,367-378 4blc d4blca_ A:76-88,103-115,273-284,309-320 1cf9 d1cf9c2 C:130-141,159-169,331-342,367-378 2cah d2caha_ A:56-68,82-95,253-265,289-300 1gge d1ggeb2 B:130-141,159-169,331-342,367-378 1ggj d1ggjd2 D:130-141,159-169,331-342,367-378 1gg9 d1gg9d2 D:130-141,159-169,331-342,367-378 1gge d1gged2 D:130-141,159-169,331-342,367-378 1gg9 d1gg9a2 A:130-141,159-169,331-342,367-378 1cf9 d1cf9a2 A:130-141,159-169,331-342,367-378 1p80 d1p80c2 C:130-141,159-169,331-342,367-378 1h6n d1h6na_ A:56-68,82-95,253-265,289-300 1th3 d1th3d1 D:76-88,102-115,273-284,309-320 1ggh d1gghb2 B:130-141,159-169,331-342,367-378 1qqw d1qqwb_ B:77-89,105-116,274-285,310-321 1a4e d1a4ec_ C:72-84,100-111,271-282,307-318 1qqw d1qqwa_ A:77-89,105-116,274-285,310-321 1m7s d1m7sa_ A:80-91,105-118,276-287,310-321 1gg9 d1gg9b2 B:130-141,159-169,331-342,367-378 1cf9 d1cf9b2 B:130-141,159-169,331-342,367-378 1qws d1qwsc2 C:130-141,159-169,331-342,367-378 1nm0 d1nm0a_ A:56-68,82-95,253-265,289-300 1gge d1ggea2 A:130-141,159-169,331-342,367-378 1p81 d1p81c2 C:130-141,159-169,331-342,367-378 1ggf d1ggfd2 D:130-141,159-169,331-342,367-378 1p7z d1p7zc2 C:130-141,159-169,331-342,367-378 1qws d1qwsa2 A:130-141,159-169,331-342,367-378 1qws d1qwsd2 D:130-141,159-169,331-342,367-378 1si8 d1si8d_ D:56-70,82-95,253-264,289-300 1f4j d1f4ja_ A:77-88,103-116,274-285,310-321 1m7s d1m7sd_ D:80-91,105-118,276-287,310-321 1si8 d1si8b_ B:56-70,82-95,253-264,289-300 1ggk d1ggka2 A:130-141,159-169,331-342,367-378 1p81 d1p81d2 D:130-141,159-169,331-342,367-378 1p80 d1p80d2 D:130-141,159-169,331-342,367-378 1p7z d1p7zb2 B:130-141,159-169,331-342,367-378 1qws d1qwsb2 B:130-141,159-169,331-342,367-378 1dgb d1dgba_ A:77-88,103-116,274-285,310-321 1th3 d1th3c1 C:76-88,102-115,273-284,309-320 1gwe d1gwea_ A:63-75,89-101,259-271,295-306 1ggf d1ggfc2 C:130-141,159-169,331-342,367-378 1p81 d1p81b2 B:130-141,159-169,331-342,367-378 1si8 d1si8a_ A:56-70,82-95,253-264,289-300 1p80 d1p80b2 B:130-141,159-169,331-342,367-378 1qqw d1qqwc_ C:77-89,105-116,274-285,310-321 1m7s d1m7sc_ C:80-91,105-118,276-287,310-321 1qf7 d1qf7d2 D:130-141,159-169,331-342,367-378 1qf7 d1qf7c2 C:130-141,159-169,331-342,367-378 1hbz d1hbza_ A:63-75,89-101,259-271,295-306 1ggk d1ggkd2 D:130-141,159-169,331-342,367-378 1p7z d1p7zd2 D:130-141,159-169,331-342,367-378 1p81 d1p81a2 A:130-141,159-169,331-342,367-378 1ggh d1gghd2 D:130-141,159-169,331-342,367-378 1ggf d1ggfa2 A:130-141,159-169,331-342,367-378 1gwh d1gwha_ A:63-75,89-101,259-271,295-306 1qf7 d1qf7b2 B:130-141,159-169,331-342,367-378 1qwl d1qwla_ A:58-70,84-97,255-267,291-302 1ggk d1ggkb2 B:130-141,159-169,331-342,367-378 1p80 d1p80a2 A:130-141,159-169,331-342,367-378 1p7y d1p7yd2 D:130-141,159-169,331-342,367-378 1ggk d1ggkc2 C:130-141,159-169,331-342,367-378 1qf7 d1qf7a2 A:130-141,159-169,331-342,367-378 1ggj d1ggja2 A:130-141,159-169,331-342,367-378 1gwf d1gwfa_ A:63-75,89-101,259-271,295-306 1p7y d1p7yc2 C:130-141,159-169,331-342,367-378 1th4 d1th4d1 D:76-88,104-115,273-284,309-320 1p7z d1p7za2 A:130-141,159-169,331-342,367-378 1ggh d1ggha2 A:130-141,159-169,331-342,367-378 1si8 d1si8c_ C:56-70,82-95,253-265,289-300 2iqf d2iqfb1 B:58-69,84-97,255-267,291-302 2a9e d2a9eb1 B:58-69,84-97,255-267,291-302 1tgu d1tgub1 B:76-87,104-115,273-284,309-320 1f4j d1f4jd_ D:77-89,104-116,274-285,310-322 1th3 d1th3b1 B:76-87,104-115,273-284,309-320 4blc d4blcb_ B:76-87,102-115,273-284,309-320 1p7y d1p7ya2 A:130-141,159-169,331-343,367-378 2a9e d2a9ea1 A:58-69,84-97,255-267,291-302 2iqf d2iqfa1 A:58-69,84-97,255-267,291-302 1u5u d1u5ub_ B:69-80,93-107,266-278,300-312 1qwm d1qwmb_ B:58-69,84-97,255-267,291-302 1qwm d1qwma_ A:58-69,84-97,255-267,291-302 1qwl d1qwlb_ B:58-69,84-97,255-267,291-302 1u5u d1u5ua_ A:69-80,93-107,266-278,300-311 1th4 d1th4c1 C:76-87,102-115,273-284,309-320 142. e.70.1 MalF N-terminal region-like MalF N-terminal region-like consists of 3 N-terminal transmembrane helices, an alpha+beta linker domain and a beta-barrel (n=7; S=8) with one overside loop 2r6g d2r6gf1 F:119-128,129-139,193-200,202-206 146. b.42.1 Cytokine beta-Trefoil barrel, closed; n=6, S=12; and a hairpin triplet; meander ! duplication: has internal pseudo threefold symmetry 1irp d1irpa_ A:12-19,21-28,108-115,146-152 1q1u d1q1ua_ A:10-18,20-27,94-100,135-141 1nun d1nuna_ A:77-85,87-94,160-167,200-206 1ira d1irax_ X:10-18,20-27,107-114,145-151 1dzc d1dzca_ A:25-32,33-40,108-114,145-151 1ilr d1ilr2_ 2:10-18,20-27,107-114,145-151 1fq9 d1fq9b_ B:20-27,28-36,102-109,138-144 1itb d1itba_ A:4-13,15-21,108-115,145-151 1ilr d1ilr1_ 1:10-18,20-27,107-114,145-151 1fq9 d1fq9a_ A:20-27,28-36,102-109,138-144 2fdb d2fdbm1 M:50-59,62-69,137-144,173-178 2fdb d2fdbn1 N:1050-1059,1062-1069,1137-1144,1173-1178 1t4q d1t4qa_ A:4-13,15-22,108-115,145-151 1too d1tooa_ A:4-13,15-22,108-115,145-151 7i1b d7i1ba_ A:4-13,41-47,108-115,145-151 8i1b d8i1ba_ A:5-13,15-22,108-115,145-151 1fga d1fgaa_ A:20-27,28-36,102-109,138-143 2nvh d2nvha1 A:4-13,15-22,108-115,145-151 1ilt d1iltb_ B:10-18,20-27,107-114,145-152 1itb d1itba_ A:4-13,41-47,108-115,145-151 1twm d1twma_ A:4-13,15-22,108-115,145-151 1iob d1ioba_ A:4-13,15-22,108-115,145-151 1twe d1twea_ A:4-13,15-22,108-115,145-151 1ilt d1ilta_ A:10-18,20-27,107-114,145-151 1cvs d1cvsa_ A:20-27,28-36,102-109,138-144 1md6 d1md6a_ A:5-13,15-22,106-113,147-153 1cvs d1cvsb_ B:20-27,28-36,102-109,138-144 1too d1tooa_ A:4-13,41-47,108-115,145-151 1fmm d1fmms_ S:4-10,11-18,86-91,123-128 1bld d1blda_ A:29-36,37-45,111-118,147-153 6i1b d6i1ba_ A:4-13,41-47,108-115,145-151 2i1b d2i1ba_ A:4-13,15-22,108-115,145-151 1g82 d1g82c_ C:63-69,71-78,145-151,186-191 9ilb d9ilba_ A:4-13,15-22,108-115,145-151 1s0l d1s0la_ A:4-13,15-22,108-115,145-151 1bff d1bffa_ A:27-35,36-44,110-117,146-153 1bla d1blaa_ A:29-36,37-45,112-118,147-153 1t4q d1t4qa_ A:4-13,41-47,108-115,145-151 4i1b d4i1ba_ A:4-13,15-22,108-115,145-151 2mib d2miba_ A:5-13,15-22,108-115,145-151 1pwa d1pwaa_ A:41-51,56-64,130-138,164-169 1axm d1axmb_ B:11-18,19-26,93-100,131-137 1k5v d1k5vb_ B:13-18,19-27,93-100,131-135 1qql d1qqla_ A:9-18,20-27,93-100,131-137 1twm d1twma_ A:4-13,41-47,108-115,145-151 7i1b d7i1ba_ A:4-13,15-21,108-115,145-151 6i1b d6i1ba_ A:4-13,15-21,108-115,145-151 1ijt d1ijta_ A:81-90,92-100,165-172,201-206 1i1b d1i1ba_ A:4-13,15-22,108-115,145-151 4fgf d4fgfa_ A:20-27,28-36,102-109,138-143 2p23 d2p23a1 A:42-51,56-64,130-138,164-169 2p23 d2p23b1 B:1042-1051,1056-1064,1130-1138,1164-1169 21bi d21bia_ A:4-13,15-22,108-115,145-151 9ilb d9ilba_ A:4-13,41-47,108-115,145-151 1twe d1twea_ A:4-13,41-47,108-115,145-151 41bi d41bia_ A:4-13,15-22,108-115,145-151 5i1b d5i1ba_ A:4-13,15-22,108-115,145-151 2irt d2irtb_ B:9-18,45-51,107-114,145-151 1nzk d1nzkd_ D:11-18,19-27,93-100,131-137 1hib d1hiba_ A:4-13,15-22,109-115,145-150 2bfh d2bfha_ A:20-27,28-36,102-109,138-144 2i1b d2i1ba_ A:4-13,41-47,108-115,145-151 4i1b d4i1ba_ A:4-13,41-47,108-115,145-151 2afg d2afgb_ B:11-18,19-26,93-100,131-136 1l2h d1l2ha_ A:4-13,15-22,108-115,145-151 1ii4 d1ii4d_ D:29-36,37-45,111-118,147-153 1ii4 d1ii4b_ B:29-36,37-45,111-118,147-153 1ii4 d1ii4c_ C:29-36,37-45,111-118,147-153 1ii4 d1ii4a_ A:29-36,37-45,111-118,147-153 1bfg d1bfga_ A:20-27,28-36,102-109,138-144 31bi d31bia_ A:4-13,15-22,108-115,145-151 5i1b d5i1ba_ A:4-13,41-47,108-115,145-151 21bi d21bia_ A:4-13,41-47,108-115,145-151 1nzk d1nzkb_ B:11-18,19-27,93-100,131-137 1evt d1evtb_ B:11-18,19-26,93-100,131-136 1j0s d1j0sa_ A:9-15,17-24,112-118,150-156 1hkn d1hkna_ A:1011-1018,1019-1027,1093-1100,1131-1137 1jt7 d1jt7d_ D:11-18,19-27,93-100,131-137 1evt d1evta_ A:11-18,19-26,93-100,131-136 1jt7 d1jt7b_ B:11-18,19-27,93-100,131-137 1hkn d1hknf_ F:6011-6018,6019-6026,6093-6100,6131-6136 41bi d41bia_ A:4-13,41-47,108-115,145-151 1bfb d1bfba_ A:21-28,29-36,103-110,139-144 1ev2 d1ev2d_ D:20-27,28-36,102-109,138-144 1ev2 d1ev2c_ C:20-27,28-36,102-109,138-144 1afc d1afch_ H:11-18,19-26,93-100,131-136 1bas d1basa_ A:21-28,29-37,103-110,139-144 1e0o d1e0oc_ C:11-18,19-26,93-100,131-137 1ev2 d1ev2a_ A:20-27,28-36,102-109,138-144 1ev2 d1ev2b_ B:20-27,28-36,102-109,138-144 1jtc d1jtcb_ B:11-18,19-27,93-100,131-137 1hkn d1hknb_ B:2011-2018,2019-2027,2093-2100,2131-2137 1iil d1iilc_ C:29-36,37-45,111-118,147-153 1axm d1axmf_ F:11-18,19-27,93-100,131-137 1iil d1iilb_ B:29-36,37-45,111-118,147-153 1iil d1iild_ D:29-36,37-45,111-118,147-153 1iil d1iila_ A:29-36,37-45,111-118,147-153 1jtc d1jtcd_ D:11-18,19-27,93-100,131-137 31bi d31bia_ A:4-13,41-47,108-115,145-151 1k5u d1k5ub_ B:11-18,19-27,93-100,131-137 2afg d2afga_ A:11-18,19-26,93-100,131-136 2fgf d2fgfa_ A:20-27,28-35,102-109,138-144 1axm d1axmc_ C:11-18,19-27,93-100,131-136 1afc d1afcc_ C:13-18,19-27,93-100,131-135 1hkn d1hknc_ C:3011-3018,3019-3026,3093-3100,3131-3137 1jt5 d1jt5b_ B:11-18,19-27,93-100,131-137 1p63 d1p63a_ A:11-18,19-27,93-100,131-137 1ihk d1ihka_ A:63-69,71-78,144-151,186-191 1g82 d1g82a_ A:63-69,71-78,144-151,186-191 1bfc d1bfca_ A:21-28,29-37,103-110,139-144 1hkn d1hkne_ E:5011-5018,5019-5026,5093-5100,5131-5137 1g82 d1g82b_ B:63-69,71-78,144-151,186-191 2ila d2ilaa_ A:17-23,25-32,114-121,147-152 1e0o d1e0oa_ A:11-18,19-27,93-100,131-137 1q03 d1q03a_ A:11-18,19-27,93-100,131-137 1g82 d1g82d_ D:63-69,71-78,144-151,186-192 1jt3 d1jt3b_ B:11-18,19-27,93-100,131-137 1bar d1barb_ B:11-18,19-27,93-100,131-136 1hkn d1hknd_ D:4011-4018,4019-4026,4093-4100,4131-4137 1p63 d1p63b_ B:11-18,19-27,93-100,131-137 1q03 d1q03b_ B:11-18,19-27,93-100,131-136 1jt4 d1jt4a_ A:11-18,19-27,93-100,131-137 1pzz d1pzzb_ B:11-18,19-27,93-100,131-137 1jt3 d1jt3a_ A:11-18,19-27,93-100,131-137 1jt4 d1jt4b_ B:11-18,19-27,93-100,131-137 1jqz d1jqza_ A:11-18,19-27,93-100,131-137 1k5u d1k5ua_ A:11-18,19-26,93-100,131-137 2axm d2axmb_ B:11-18,19-27,93-100,131-136 1jy0 d1jy0a_ A:11-18,19-27,93-100,131-137 1q04 d1q04a_ A:11-18,19-27,93-100,131-137 1pzz d1pzza_ A:11-18,19-27,93-100,131-137 1jt5 d1jt5a_ A:11-18,19-27,93-100,131-137 1jqz d1jqzb_ B:11-18,19-27,93-100,131-137 1axm d1axma_ A:11-18,19-27,93-100,131-136 1q04 d1q04b_ B:11-18,19-27,93-100,131-137 1jy0 d1jy0b_ B:11-18,19-27,93-100,131-136 2afg d2afgc_ C:11-18,19-27,93-100,131-137 1k5u d1k5uc_ C:11-18,19-27,93-100,131-137 1rg8 d1rg8a_ A:11-18,19-27,93-100,131-137 1ira d1irax_ X:10-18,45-51,107-114,145-151 1nzk d1nzka_ A:11-18,19-27,93-100,131-137 1m16 d1m16b_ B:11-18,19-27,93-100,131-137 1afc d1afcg_ G:11-18,19-26,93-100,131-136 1m16 d1m16a_ A:11-18,19-27,93-100,131-137 1axm d1axmd_ D:11-18,19-26,93-100,131-137 2afg d2afgd_ D:11-18,19-27,93-100,131-137 2axm d2axma_ A:11-18,19-27,93-100,131-137 1jtc d1jtca_ A:11-18,19-27,93-100,131-137 1nzk d1nzkc_ C:11-18,19-27,93-100,131-137 1rg8 d1rg8b_ B:11-18,19-27,93-100,131-136 1bar d1bara_ A:11-18,19-27,93-100,131-137 1jtc d1jtcc_ C:11-18,19-27,93-100,131-137 1jt7 d1jt7c_ C:11-18,19-27,93-100,131-137 1djs d1djsb_ B:11-18,19-27,93-100,131-136 1jt7 d1jt7a_ A:11-18,19-27,93-100,131-137 1afc d1afcb_ B:11-18,19-27,93-100,131-136 1afc d1afcf_ F:11-18,19-27,93-100,131-136 1axm d1axme_ E:11-18,19-27,93-100,131-137 1afc d1afce_ E:11-18,19-27,93-100,131-136 1k5v d1k5va_ A:11-18,19-27,93-100,131-137 1qqk d1qqkb_ B:9-18,20-27,93-100,133-139 1qqk d1qqka_ A:9-18,20-27,93-100,133-138 2irt d2irta_ A:10-18,45-51,107-114,145-151 1afc d1afca_ A:11-18,19-27,93-100,131-136 1afc d1afcd_ D:11-18,19-27,93-100,131-136 1md6 d1md6a_ A:5-13,40-46,106-113,147-153 8i1b d8i1ba_ A:5-13,41-47,108-115,145-151 1q1u d1q1ua_ A:10-18,43-49,94-100,135-141 1ilr d1ilr2_ 2:10-18,45-52,107-114,145-151 1ilr d1ilr1_ 1:10-18,45-52,107-114,145-151 1ry7 d1ry7a_ A:26-32,36-42,108-115,146-151 1ilt d1ilta_ A:10-18,45-52,107-114,145-151 1ilt d1iltb_ B:10-18,45-52,107-114,145-152 148. b.170.1 WSSV envelope protein-like WSSV envelope protein-like beta-sandwich; 9 strands in 2 sheets; greek-key 2edm d2edma1 A:46-57,59-64,126-137,180-193 2ed6 d2ed6k1 K:48-59,63-67,131-142,188-198 2ed6 d2ed6l1 L:48-59,63-67,131-142,188-198 2ed6 d2ed6f1 F:48-59,63-67,131-142,188-198 2ed6 d2ed6i1 I:48-59,63-67,131-142,188-198 2ed6 d2ed6d1 D:48-59,63-67,131-142,188-198 2ed6 d2ed6a1 A:48-59,63-67,131-142,188-198 2ed6 d2ed6c1 C:48-59,63-67,131-142,188-198 2ed6 d2ed6g1 G:48-59,63-67,131-142,188-198 2ed6 d2ed6e1 E:48-59,63-67,131-142,188-198 2ed6 d2ed6h1 H:48-59,63-67,131-142,188-198 2ed6 d2ed6b1 B:48-59,63-67,131-142,188-198 2ed6 d2ed6j1 J:48-59,63-67,130-142,188-198 151. b.61.6 YceI-like Streptavidin-like barrel, closed; n=8, S=10; meander 1y0g d1y0ga_ A:23-27,54-61,149-162,178-190 1y0g d1y0gc_ C:23-27,54-61,149-162,178-190 1y0g d1y0gb_ B:23-27,54-61,149-162,178-190 1y0g d1y0gd_ D:23-27,54-61,149-162,178-190 1wub d1wuba_ A:9-19,21-29,125-139,159-173 1wub d1wuba_ A:1-5,29-39,125-139,159-173 1y0g d1y0gb_ B:33-43,45-53,149-162,178-190 1y0g d1y0gd_ D:33-43,45-53,149-162,178-190 1y0g d1y0gc_ C:33-43,45-53,149-162,178-190 1y0g d1y0ga_ A:33-43,45-53,149-162,178-190 153. b.43.2 FucI/AraA C-terminal domain-like Reductase/isomerase/elongation factor common domain barrel, closed; n=6, S=10; greek-key 2hxg d2hxgc1 C:331-341,342-349,388-400,449-456 2ajt d2ajta1 A:331-341,342-349,389-400,449-456 2ajt d2ajtc1 C:331-341,342-349,389-400,449-456 2ajt d2ajtb1 B:331-341,342-349,389-400,449-456 2hxg d2hxga1 A:331-341,342-349,388-400,449-456 1fui d1fuid1 D:357-367,386-392,454-466,527-534 2hxg d2hxgb1 B:331-341,342-349,389-400,449-456 158. d.261.1 Hypothetical protein PH1602 Hypothetical protein PH1602 complex alpha+beta fold; contains a region of similarity to the ferredoxin-like fold 1uc2 d1uc2b_ B:207-214,227-237,382-391,466-476 1uc2 d1uc2a_ A:203-214,227-237,382-391,466-476 159. b.145.1 AXH domain AXH domain pseudobarrel; some similarity to OB-fold 1oa8 d1oa8b_ B:613-622,626-636,650-654,679-684 1oa8 d1oa8c_ C:608-622,626-636,650-654,681-689 1oa8 d1oa8d_ D:608-622,626-636,650-654,681-689 1oa8 d1oa8a_ A:608-618,626-635,650-654,681-689 161. d.213.1 VSV matrix protein VSV matrix protein beta-alpha(2)-beta(4)-alpha-beta(2); two layers: alpha/beta; bifurcated coiled beta-sheet: order of the first 5 strands: 23154 1lg7 d1lg7a_ A:59-75,128-140,151-165,166-180 162. b.42.5 Actin-crosslinking proteins beta-Trefoil barrel, closed; n=6, S=12; and a hairpin triplet; meander ! duplication: has internal pseudo threefold symmetry 1dfc d1dfca1 A:1012-1019,1021-1028,1098-1107,1131-1138 1dfc d1dfcb1 B:2012-2019,2021-2028,2098-2107,2131-2138 1hce d1hcea_ A:3-9,11-18,81-88,112-118 1dfc d1dfca3 A:1261-1268,1270-1275,1343-1350,1375-1381 1dfc d1dfcb2 B:2140-2148,2149-2156,2219-2225,2253-2258 1dfc d1dfca2 A:1140-1148,1149-1156,1219-1226,1253-1258 1hcd d1hcda_ A:1-8,12-18,81-88,112-118 1dfc d1dfcb1 B:2012-2019,2045-2049,2098-2107,2131-2138 1dfc d1dfca1 A:1012-1019,1045-1049,1098-1107,1131-1138 163. e.42.1 L-A virus major coat protein L-A virus major coat protein large protein without apparent domain division 1m1c d1m1cb_ B:24-39,40-55,487-492,586-600 1m1c d1m1ca_ A:24-39,40-55,487-492,586-601 165. e.56.1 YaeB-like YaeB-like 2 domains; d1: [beta-barrel (n=6, S=10), similar to the Reductase/isomerase/elongation factor common domain fold (scop_cf 50412), provides homodimerisation interface]; d2: [alpha+beta (disordered)] 1xqb d1xqba_ A:9-14,32-39,55-63,128-133 1xqb d1xqbb_ B:9-14,32-39,55-63,128-133 166. f.4.5 Autotransporter forms (12,14) barrel; contains a long alpha-helix running along the barrel axis ! Transmembrane beta-barrels not a true fold, gathers together transmembrane barrels of different (n,S) 1uyo d1uyox_ X:818-833,838-854,1056-1069,1070-1084 1uyn d1uynx_ X:818-835,836-855,1056-1069,1070-1084 169. b.42.3 Agglutinin this superfamily is distinct from the ricin B-like lectin superfamily ! beta-Trefoil barrel, closed; n=6, S=12; and a hairpin triplet; meander ! duplication: has internal pseudo threefold symmetry 1jly d1jlya1 A:5-13,14-21,108-116,148-154 1jlx d1jlxa1 A:5-13,14-21,108-116,148-154 1jlx d1jlxb1 B:5-13,14-21,108-116,148-154 1jly d1jlyb1 B:5-13,14-21,108-116,148-154 1jly d1jlya2 A:162-170,172-181,254-262,293-299 1jly d1jlyb2 B:164-170,172-181,254-262,293-299 1jlx d1jlxb2 B:164-170,172-181,254-262,293-299 1jlx d1jlxa2 A:164-170,172-181,254-262,293-299 170. f.4.2 Outer membrane phospholipase A (OMPLA) forms (12,16) barrel ! Transmembrane beta-barrels not a true fold, gathers together transmembrane barrels of different (n,S) 1qd6 d1qd6.1 C:37-47,64-80,234-245,255-262 1qd6 d1qd6.2 D:37-47,64-80,234-245,255-262 1fw3 d1fw3b_ B:37-47,64-80,234-245,255-262 1fw3 d1fw3a_ A:37-47,64-80,234-245,255-262 1qd5 d1qd5a_ A:37-47,64-80,234-245,255-262 1ilz d1ilza_ A:37-47,64-80,234-245,255-262 1fw2 d1fw2a_ A:37-47,64-80,234-245,255-262 1ild d1ilda_ A:37-47,64-80,234-245,255-262 1im0 d1im0a_ A:37-47,64-80,234-245,255-262 1im0 d1im0a_ A:37-47,64-80,234-245,262-266 1ild d1ilda_ A:37-47,64-80,234-245,262-266 1qd6 d1qd6.1 C:37-47,64-80,234-245,262-266 1ilz d1ilza_ A:37-47,64-80,234-245,262-266 1qd6 d1qd6.2 D:37-47,64-80,234-245,262-266 1fw2 d1fw2a_ A:37-47,64-80,234-245,262-266 1fw3 d1fw3a_ A:37-47,64-80,234-245,262-266 1fw3 d1fw3b_ B:37-47,64-80,234-245,262-266 1qd5 d1qd5a_ A:37-47,64-80,234-245,262-266 172. g.41.6 Hypothetical protein MTH1184 contains two CXC motifs ! Rubredoxin-like metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2 1gh9 d1gh9a_ A:1-8,10-17,20-25,27-32 175. b.42.6 MIR domain beta-Trefoil barrel, closed; n=6, S=12; and a hairpin triplet; meander ! duplication: has internal pseudo threefold symmetry 1n4k d1n4ka2 A:237-246,247-257,387-394,429-435 1t9f d1t9fa_ A:29-38,39-45,150-157,190-195 178. b.166.1 MAL13P1.257-like MAL13P1.257-like complex fold; duplication: consists of two intertwinned structural repeats related by pseudo dyad 1zso d1zsoa1 A:3-14,90-103,133-141,142-156 1zso d1zsob1 B:1-14,90-103,133-141,142-156 182. b.42.8 AbfB domain beta-Trefoil barrel, closed; n=6, S=12; and a hairpin triplet; meander ! duplication: has internal pseudo threefold symmetry 2d43 d2d43a2 A:347-355,362-368,448-454,490-496 1wd3 d1wd3a2 A:347-355,362-368,448-454,490-496 1wd4 d1wd4a2 A:346-355,362-368,448-454,490-496 2d44 d2d44a2 A:346-355,362-368,448-454,490-496 183. b.159.1 Allene oxide cyclase-like AOC barrel-like barrel, closed; n=8, S=10; meander; mirrored (reversed) topology to the Spreptavidin-like and Lipocalin-like folds 2q4i d2q4ic1 C:21-30,50-63,132-140,143-152 1z8k d1z8ka1 A:21-30,50-63,132-140,143-152 1z8k d1z8kb1 B:21-30,50-63,132-140,143-152 2brj d2brja1 A:16-25,45-58,127-135,138-147 2dio d2dioa1 A:16-25,45-58,127-135,138-147 2brj d2brjc1 C:16-25,45-58,127-135,138-147 2gin d2ginb1 B:16-25,45-58,127-135,138-147 2gin d2ginf1 F:16-25,45-58,127-135,138-147 2gin d2ginc1 C:16-25,45-58,127-135,138-147 2brj d2brjb1 B:16-25,45-58,125-135,138-148 2gin d2gind1 D:16-25,45-58,127-135,138-147 1zvc d1zvca1 A:21-30,50-63,129-140,143-153 2dio d2dioc1 C:16-25,45-58,124-135,138-148 2q4i d2q4ia1 A:21-30,50-63,130-140,143-153 2dio d2diob1 B:16-25,45-58,124-135,138-148 2gin d2gine1 E:16-25,45-58,125-135,138-148 1z8k d1z8kc1 C:21-30,50-63,129-140,143-153 2q4i d2q4ib1 B:21-30,50-63,129-140,143-153 2gin d2gina1 A:16-25,46-58,125-135,138-148 186. f.4.6 Tsx-like channel forms (12,16) barrel ! Transmembrane beta-barrels not a true fold, gathers together transmembrane barrels of different (n,S) 1tlz d1tlza_ A:21-26,31-46,226-238,259-272 1tlw d1tlwb_ B:21-26,31-46,226-238,259-272 1tly d1tlya_ A:21-26,31-46,226-238,260-272 1tlw d1tlwa_ A:21-26,31-46,226-238,260-272 1tly d1tlyb_ B:21-26,31-46,226-238,260-272 1tlz d1tlzb_ B:21-26,31-46,226-238,260-272 1tlz d1tlzb_ B:12-21,31-46,226-238,260-272 1tly d1tlyb_ B:12-21,31-46,226-238,260-272 1tlw d1tlwb_ B:12-21,31-46,226-238,259-272 1tlw d1tlwa_ A:12-21,31-46,226-238,260-272 1tlz d1tlza_ A:12-21,31-46,226-238,259-272 1tly d1tlya_ A:12-21,31-46,226-238,260-272 188. b.31.1 EV matrix protein EV matrix protein consists of two beta-sandwich domains of similar topologies 1h2c d1h2ca_ A:70-83,87-102,119-128,172-186 1h2d d1h2db_ B:70-83,87-102,119-128,172-186 1h2d d1h2da_ A:70-83,87-102,119-127,172-186 190. b.159.2 SO1590-like AOC barrel-like barrel, closed; n=8, S=10; meander; mirrored (reversed) topology to the Spreptavidin-like and Lipocalin-like folds 2q03 d2q03b1 B:7-28,30-44,115-124,126-135 2q03 d2q03a1 A:6-28,30-44,113-124,126-137 2ooj d2oojb1 B:3-17,26-40,110-121,122-133 2ooj d2ooja1 A:3-17,26-40,110-121,122-133 192. b.42.7 DNA-binding protein LAG-1 (CSL) contains rudiment hairpin triplet lacking one hairpin ! beta-Trefoil barrel, closed; n=6, S=12; and a hairpin triplet; meander ! duplication: has internal pseudo threefold symmetry 2fo1 d2fo1a3 A:388-398,404-412,493-501,535-551 3brd d3brda3 A:389-398,404-412,493-501,535-551 1ttu d1ttua3 A:389-398,404-412,493-500,535-551 3brf d3brfa3 A:389-398,404-412,493-500,535-551 193. f.4.4 OMPT-like forms (10,12) barrel ! Transmembrane beta-barrels not a true fold, gathers together transmembrane barrels of different (n,S) 1i78 d1i78b_ B:11-32,40-60,244-259,279-297 1i78 d1i78a_ A:11-32,40-60,244-269,279-297 2vdf d2vdfa1 A:7-24,25-45,205-225,234-253 1k24 d1k24a_ A:8-22,29-44,205-229,230-253 196. f.8.1 Aerolisin/ETX pore-forming domain Aerolisin/ETX pore-forming domain 3 domains: (1) alpha+beta; (2&3) all-beta 1uyj d1uyja_ A:95-120,152-174,175-210,234-260 1uyj d1uyjc_ C:95-120,152-174,175-210,234-260 1uyj d1uyjb_ B:95-120,152-174,175-210,234-260 3c0n d3c0na2 A:214-232,269-282,287-323,395-421 1z52 d1z52a2 A:214-232,269-282,288-323,395-422 3c0m d3c0mb2 B:214-232,269-282,288-323,395-421 3c0n d3c0nb2 B:214-232,269-282,287-323,395-421 1pre d1preb2 B:214-232,269-282,287-323,395-421 3c0m d3c0ma2 A:214-232,269-282,287-323,395-421 1pre d1prea2 A:214-232,269-283,288-323,395-422 3c0o d3c0oa2 A:214-232,269-282,287-324,395-421 1z52 d1z52b2 B:214-232,269-282,288-323,395-422 3c0o d3c0ob2 B:214-232,269-282,290-324,395-421