1. c.68.1 Nucleotide-diphospho-sugar transferases
Nucleotide-diphospho-sugar transferases 3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest
1tzf d1tzfa_ A:4-9,34-47,124-130,131-135
1wvc d1wvca_ A:4-9,34-47,124-130,131-135
1jyl d1jyla_ A:6-13,37-50,100-106,107-111
1jyl d1jylc_ C:6-13,37-50,100-106,107-111
1jyl d1jyld_ D:6-13,37-50,100-106,107-111
1jyl d1jylb_ B:6-13,37-50,100-106,107-111
1jyk d1jyka_ A:6-13,37-50,100-106,107-111
1g23 d1g23a_ A:3-9,34-47,102-109,110-115
1g23 d1g23g_ G:3-9,34-47,102-109,110-115
1g23 d1g23d_ D:3-9,34-47,102-109,110-115
1g23 d1g23e_ E:3-9,34-47,102-109,110-115
2am4 d2am4a1 A:108-115,117-131,206-212,213-217
1g23 d1g23b_ B:3-9,34-47,102-109,110-115
1foa d1foaa_ A:108-115,117-131,206-212,213-217
2am5 d2am5a1 A:108-115,117-131,206-212,213-217
1g1l d1g1la_ A:3-9,34-47,102-109,110-115
2am3 d2am3a1 A:108-115,117-131,206-212,213-217
1g1l d1g1ld_ D:3-9,34-47,102-109,110-115
1fxo d1fxoa_ A:3-9,34-47,102-109,110-115
1g1l d1g1lh_ H:3-9,34-47,102-109,110-115
1g0r d1g0rd_ D:3-9,34-47,102-109,110-115
2apc d2apca1 A:108-115,117-131,206-212,213-217
1g0r d1g0ra_ A:3-9,34-47,102-109,110-115
1fxo d1fxog_ G:3-9,34-47,102-109,110-115
1g3l d1g3lb_ B:3-9,34-47,102-109,110-115
1fxo d1fxoh_ H:3-9,34-47,102-109,110-115
1g2v d1g2ve_ E:3-9,34-47,102-109,110-115
1g0r d1g0rh_ H:3-9,34-47,102-109,110-115
1fxo d1fxoe_ E:3-9,34-47,102-109,110-115
1g1l d1g1lg_ G:3-9,34-47,102-109,110-115
1g2v d1g2vf_ F:3-9,34-47,102-109,110-115
1fo8 d1fo8a_ A:107-115,117-131,206-212,213-217
1h5r d1h5ra_ A:4-10,35-48,103-110,111-116
1g23 d1g23h_ H:3-10,34-47,102-109,110-115
1g0r d1g0rc_ C:3-9,34-47,102-109,110-115
1mc3 d1mc3a_ A:1-7,32-45,100-107,108-113
1g23 d1g23f_ F:3-10,34-47,102-109,110-115
1g0r d1g0rg_ G:3-9,34-47,102-109,110-115
1on6 d1on6b_ B:66-74,76-90,145-151,153-157
1fo9 d1fo9a_ A:107-115,117-131,206-212,213-217
1g23 d1g23c_ C:3-10,34-47,102-109,110-115
1omz d1omzb_ B:66-74,76-90,145-151,153-157
1g0r d1g0rb_ B:3-10,34-47,102-109,110-115
1g3l d1g3ld_ D:3-10,34-47,102-109,110-115
1fzw d1fzwg_ G:3-9,34-47,102-109,110-115
1g3l d1g3lc_ C:2-9,34-47,102-109,110-115
1g2v d1g2vd_ D:3-10,34-47,102-109,110-115
1g2v d1g2vb_ B:3-10,34-47,102-109,110-115
1fxo d1fxob_ B:3-10,34-47,102-109,110-115
1g2v d1g2vh_ H:3-10,34-47,102-109,110-115
1omz d1omza_ A:66-74,76-90,145-151,153-157
1g2v d1g2va_ A:3-10,34-47,102-109,110-115
1g2v d1g2vc_ C:3-10,34-47,102-109,110-115
1iim d1iima_ A:5-11,35-48,103-110,111-116
1g1l d1g1lb_ B:3-10,34-47,102-109,110-115
1fxo d1fxod_ D:2-9,34-47,102-109,110-115
1mc3 d1mc3b_ B:1-8,32-45,100-107,108-113
1g3l d1g3la_ A:3-10,34-47,102-109,110-115
1on6 d1on6a_ A:66-74,76-90,145-151,153-157
1fzw d1fzwh_ H:3-10,34-47,102-109,110-115
1iim d1iimb_ B:5-10,35-48,103-110,111-116
1fxo d1fxoc_ C:2-9,34-47,102-109,110-115
1fzw d1fzwd_ D:2-9,34-47,102-109,110-115
1on8 d1on8b_ B:66-74,76-90,145-151,153-157
1on8 d1on8a_ A:66-74,76-90,145-151,153-157
1g0r d1g0rf_ F:2-10,34-47,102-109,110-115
1fzw d1fzwb_ B:3-10,34-47,102-109,110-115
1ss9 d1ss9a_ A:1-9,8-27,98-103,105-109
1g2v d1g2vg_ G:2-10,34-47,102-109,110-115
1fxo d1fxof_ F:2-10,34-47,102-109,110-115
1g1l d1g1lc_ C:2-9,34-47,102-109,110-115
1g1l d1g1le_ E:2-10,34-47,102-109,110-115
1g1l d1g1lf_ F:2-10,34-47,102-109,110-115
1fzw d1fzwa_ A:3-10,34-47,102-109,110-115
1g0r d1g0re_ E:2-9,34-47,102-109,110-115
1mp3 d1mp3b_ B:5-11,35-48,103-110,111-116
1mp3 d1mp3a_ A:5-11,35-48,103-110,111-116
1fzw d1fzwf_ F:2-10,34-47,102-109,110-115
1omx d1omxb_ B:66-74,76-90,145-151,153-157
1g9r d1g9ra_ A:1-9,8-27,98-103,105-109
1ga8 d1ga8a_ A:1-9,8-27,98-103,105-109
1fzw d1fzwe_ E:2-9,34-47,102-109,110-115
2vfz d2vfza1 A:128-136,135-155,219-225,227-231
1fzw d1fzwc_ C:2-10,34-47,102-109,110-115
1omx d1omxa_ A:66-73,76-90,145-152,153-157
1fg5 d1fg5n_ N:47-55,54-74,138-144,146-150
1gwv d1gwvb_ B:128-136,135-155,219-225,227-231
2vs5 d2vs5a1 A:128-136,135-155,219-225,227-231
1g93 d1g93a_ A:128-136,135-155,219-225,227-231
2jck d2jcka1 A:1128-1136,1135-1155,1219-1225,1227-1231
2vs5 d2vs5b1 B:128-136,135-155,219-225,227-231
2vfz d2vfzb1 B:1128-1136,1135-1155,1219-1225,1227-1231
1nhe d1nhed_ D:180-189,191-203,246-252,254-258
1vzx d1vzxb_ B:1128-1136,1135-1155,1219-1225,1227-1231
1vzu d1vzub_ B:1128-1136,1135-1155,1219-1225,1227-1231
1o7o d1o7ob_ B:1128-1136,1135-1155,1219-1225,1227-1231
1vzt d1vztb1 B:1128-1136,1135-1155,1219-1225,1227-1231
2jcj d2jcja1 A:128-136,135-155,219-225,227-231
1vzx d1vzxa_ A:128-136,135-155,219-225,227-231
1gww d1gwwb_ B:128-136,135-155,219-225,227-231
1gx0 d1gx0b_ B:128-136,135-155,219-225,227-231
1gww d1gwwa_ A:128-136,135-155,219-225,227-231
1gwv d1gwva_ A:128-136,135-155,219-225,227-231
1k4v d1k4vb_ B:1128-1136,1135-1155,1219-1225,1227-1231
1vzu d1vzua_ A:128-136,135-155,219-225,227-231
1k4v d1k4va_ A:128-136,135-155,219-225,227-231
1gx0 d1gx0a_ A:128-136,135-155,219-225,227-231
1vzt d1vzta1 A:128-136,135-155,219-225,227-231
1nqi d1nqid_ D:180-189,191-202,246-252,254-258
1o7o d1o7oa_ A:128-136,135-155,219-225,227-231
1o7q d1o7qb_ B:128-136,135-155,219-225,227-231
2jcl d2jclb1 B:2128-2136,2143-2155,2219-2225,2227-2231
1zct d1zctb1 B:2-10,11-29,95-101,103-107
1zct d1zcta1 A:2-10,11-29,95-101,103-107
1tvy d1tvyb_ B:181-189,191-202,246-252,254-258
1o7q d1o7qa_ A:128-136,135-155,219-225,227-231
2jco d2jcoa1 A:128-136,143-155,219-225,227-231
1gx4 d1gx4b_ B:128-136,135-155,219-225,227-231
1nf5 d1nf5d_ D:180-189,191-202,246-252,254-258
1ll0 d1ll0h_ H:2-10,11-29,95-101,103-107
1nmm d1nmmd_ D:180-189,191-202,246-252,254-258
1ll0 d1ll0d_ D:2-10,11-29,95-101,103-107
1gx4 d1gx4a_ A:128-136,135-155,219-225,227-231
1ll0 d1ll0i_ I:2-10,11-29,95-101,103-107
1ll2 d1ll2a_ A:3-11,12-30,96-102,104-108
1ll0 d1ll0c_ C:2-10,11-29,95-101,103-107
1zdf d1zdfa1 A:2-10,11-29,95-101,103-107
1ll0 d1ll0b_ B:2-10,11-29,95-101,103-107
1ll0 d1ll0e_ E:2-10,11-29,95-101,103-107
1nwg d1nwgd_ D:180-189,191-202,246-252,254-258
1ll3 d1ll3a_ A:2-10,11-29,95-101,103-107
1ll0 d1ll0g_ G:2-10,11-29,95-101,103-107
1ll0 d1ll0a_ A:2-10,11-29,95-101,103-107
1tvy d1tvya_ A:180-189,191-202,246-252,254-258
1zcy d1zcya1 A:2-10,11-29,95-101,103-107
1ll0 d1ll0f_ F:2-10,11-29,95-101,103-107
1zcv d1zcva1 A:2-10,11-29,95-101,103-107
1fgx d1fgxa_ A:180-189,191-202,246-252,254-258
1zdg d1zdga1 A:2-10,11-29,95-101,103-107
1zcu d1zcua1 A:2-10,11-29,95-101,103-107
1tw1 d1tw1a_ A:180-189,191-202,246-252,254-258
1fgx d1fgxb_ B:180-189,191-202,246-252,254-258
1g8o d1g8oa_ A:128-136,143-155,219-225,227-231
1nmm d1nmmb_ B:180-189,191-202,246-252,254-258
1yro d1yrod1 D:180-189,191-202,246-252,254-258
1r7t d1r7ta_ A:115-123,122-141,205-211,213-217
1r81 d1r81a_ A:115-123,122-141,205-211,213-217
1tw5 d1tw5b_ B:180-189,191-202,246-252,254-258
1fr8 d1fr8a_ A:180-189,191-202,246-252,254-258
2riy d2riya1 A:115-123,122-141,205-211,213-217
1oqm d1oqmd_ D:180-189,191-202,246-252,254-258
1lzj d1lzja_ A:115-123,122-141,205-211,213-217
1mp5 d1mp5a_ A:5-10,35-48,103-110,112-116
1xz6 d1xz6a_ A:115-123,122-141,205-211,213-217
2a8u d2a8ua1 A:115-123,122-141,205-211,213-217
2rit d2rita1 A:115-123,122-141,205-211,213-217
2rix d2rixa1 A:115-122,122-141,205-211,213-217
1zj2 d1zj2a1 A:115-123,122-141,205-211,213-217
1zj3 d1zj3a1 A:115-123,122-141,205-211,213-217
1o0r d1o0rb_ B:180-189,191-202,246-252,254-258
1lzi d1lzia_ A:115-123,122-141,205-211,213-217
2fyc d2fycd1 D:180-189,191-202,246-252,254-258
1zjo d1zjoa1 A:115-123,122-141,205-211,213-217
1oqm d1oqmb_ B:180-189,191-202,246-252,254-258
1wt1 d1wt1a_ A:115-123,122-141,205-211,213-217
1nkh d1nkhd_ D:180-189,191-202,246-252,254-258
1wt3 d1wt3a_ A:115-123,122-141,205-211,213-217
1lz7 d1lz7a_ A:115-123,122-141,205-211,213-217
1zjp d1zjpa1 A:115-123,122-141,205-211,213-217
1nwg d1nwgb_ B:180-189,191-201,246-252,254-258
2a8w d2a8wa1 A:115-123,122-141,205-211,213-217
2rj8 d2rj8a1 A:115-122,122-141,205-211,213-217
1wt2 d1wt2a_ A:115-123,122-141,205-211,213-217
1r80 d1r80a_ A:115-123,122-141,205-211,213-217
1r82 d1r82a_ A:115-123,122-141,205-211,213-217
2rj9 d2rj9a1 A:115-122,122-141,205-211,213-217
1ziz d1ziza1 A:115-123,122-141,205-211,213-217
1r7y d1r7ya_ A:115-123,122-141,205-211,213-217
1o23 d1o23d_ D:582-591,593-604,648-654,656-660
1zj0 d1zj0a1 A:115-123,122-141,205-211,213-217
2jcl d2jcla1 A:1128-1136,1143-1155,1219-1225,1227-1231
1mp5 d1mp5b_ B:5-11,35-48,103-110,112-116
1r7u d1r7ua_ A:115-123,122-141,205-211,213-217
1r7x d1r7xa_ A:115-123,122-141,205-211,213-217
2fyd d2fydd1 D:180-189,191-202,246-252,254-258
1zhj d1zhja1 A:115-122,122-141,205-211,213-217
1wsz d1wsza_ A:115-123,122-141,205-211,213-217
1lz0 d1lz0a_ A:115-123,122-141,205-211,213-217
1zi1 d1zi1a1 A:115-123,122-141,205-211,213-217
1zj1 d1zj1a1 A:115-123,122-141,205-211,213-217
1tw5 d1tw5a_ A:180-189,191-201,246-252,254-258
1zi4 d1zi4a1 A:115-123,123-141,205-211,213-217
1pzy d1pzyd_ D:180-189,191-201,246-252,254-258
2fyc d2fycb1 B:180-189,191-201,246-252,254-258
1nqi d1nqib_ B:180-189,191-201,246-252,254-258
1nhe d1nheb_ B:180-189,191-201,246-252,254-258
1r7v d1r7va_ A:115-123,122-141,205-211,213-217
1wt0 d1wt0a_ A:115-123,122-141,205-211,213-217
2fyd d2fydb1 B:180-189,191-202,246-252,254-258
1yro d1yrob1 B:180-189,191-201,246-252,254-258
1tw1 d1tw1b_ B:180-189,191-201,246-252,254-258
1ll0 d1ll0j_ J:3-10,11-29,95-101,103-107
1fr8 d1fr8b_ B:180-189,191-201,246-252,254-258
1pzt d1pzta_ A:180-189,191-202,246-252,254-258
1zi3 d1zi3a1 A:115-123,123-141,205-211,213-217
1o23 d1o23b_ B:180-189,191-201,246-252,254-258
1pzy d1pzyb_ B:180-189,191-201,246-252,254-258
1nkh d1nkhb_ B:180-189,191-201,246-252,254-258
1nf5 d1nf5b_ B:180-189,191-201,246-252,254-258
1o0r d1o0ra_ A:180-189,191-201,246-252,254-258
1zi5 d1zi5a1 A:115-122,123-141,205-211,213-217
1tw5 d1tw5a_ A:180-189,200-210,246-252,254-258
1fr8 d1fr8b_ B:180-189,200-210,246-252,254-258
1nkh d1nkhb_ B:180-189,200-210,246-252,254-258
2fyc d2fycb1 B:180-189,200-210,246-252,254-258
1pzy d1pzyb_ B:180-189,200-210,246-252,254-258
1nhe d1nheb_ B:180-189,200-210,246-252,254-258
1o23 d1o23b_ B:180-189,200-210,246-252,254-258
1yro d1yrob1 B:180-189,200-210,246-252,254-258
1pzy d1pzyd_ D:180-189,200-210,246-252,254-258
1nf5 d1nf5b_ B:180-189,200-210,246-252,254-258
1tw1 d1tw1b_ B:180-189,200-210,246-252,254-258
1nqi d1nqib_ B:180-189,200-210,246-252,254-258
1nwg d1nwgb_ B:180-189,200-210,246-252,254-258
1o0r d1o0ra_ A:180-189,200-210,246-252,254-258
1v82 d1v82b_ B:84-93,95-113,188-195,197-201
1fgg d1fgga_ A:75-84,86-104,187-194,196-200
1o23 d1o23d_ D:582-591,603-612,648-654,656-660
1nkh d1nkhd_ D:180-189,201-210,246-252,254-258
1tvy d1tvya_ A:180-189,201-210,246-252,254-258
1nwg d1nwgd_ D:180-189,201-210,246-252,254-258
1oqm d1oqmd_ D:180-189,201-210,246-252,254-258
1tw1 d1tw1a_ A:180-189,201-210,246-252,254-258
1fgx d1fgxb_ B:180-189,201-210,246-252,254-258
1oqm d1oqmb_ B:180-189,201-210,246-252,254-258
1nqi d1nqid_ D:180-189,201-210,246-252,254-258
1yro d1yrod1 D:180-189,201-210,246-252,254-258
1tw5 d1tw5b_ B:180-189,201-210,246-252,254-258
2fyc d2fycd1 D:180-189,201-210,246-252,254-258
1fr8 d1fr8a_ A:180-189,201-210,246-252,254-258
1fgx d1fgxa_ A:180-189,201-210,246-252,254-258
1nmm d1nmmb_ B:180-189,201-210,246-252,254-258
1tvy d1tvyb_ B:181-189,201-210,246-252,254-258
1nf5 d1nf5d_ D:180-189,201-210,246-252,254-258
1o0r d1o0rb_ B:180-189,201-210,246-252,254-258
1nmm d1nmmd_ D:180-189,201-210,246-252,254-258
2cu2 d2cu2a2 A:2-9,36-46,101-108,110-114
1pzt d1pzta_ A:180-189,201-210,246-252,254-258
2fyd d2fydd1 D:180-189,201-210,246-252,254-258
2fyd d2fydb1 B:180-189,201-210,246-252,254-258
1kws d1kwsb_ B:76-84,86-104,188-193,196-200
3cu0 d3cu0b1 B:76-84,86-104,188-193,196-200
1xhb d1xhba2 A:117-125,128-144,203-208,211-215
1kws d1kwsa_ A:75-84,86-104,187-193,196-200
1v82 d1v82a_ A:84-93,95-113,188-194,197-201
1v84 d1v84b_ B:84-93,95-113,188-194,197-201
1v84 d1v84a_ A:84-93,95-113,188-194,197-201
1v83 d1v83b_ B:84-93,95-113,188-194,197-201
1v83 d1v83a_ A:84-93,95-113,188-194,197-201
3cu0 d3cu0a1 A:75-84,86-104,187-193,196-200
1fgg d1fggb_ B:75-84,86-104,187-193,196-200
2. c.26.2 Adenine nucleotide alpha hydrolases-like share similar mode of ligand (Adenosine group) binding ! can be subdivided into two group with closer relationships within each group than between the groups; the first three families form one group whereas the last two families form the other group !
Adenine nucleotide alpha hydrolase-like core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145
1o96 d1o96e_ E:1-7,36-53,114-120,145-151
1o96 d1o96a_ A:1-7,36-53,114-120,145-151
1o96 d1o96c_ C:1-7,36-53,114-120,145-151
1o96 d1o96q_ Q:1-7,36-54,114-120,145-151
1o94 d1o94c_ C:1-7,36-54,114-120,145-151
1o95 d1o95c_ C:1-7,36-54,114-120,145-151
3clu d3cluc1 C:1-7,36-54,114-120,145-151
3clt d3cltc1 C:1-7,36-54,114-120,145-151
3clr d3clrc1 C:1-7,36-54,114-120,145-151
3cls d3clsc1 C:1-7,36-54,114-120,145-151
1o97 d1o97c_ C:1-7,36-54,114-120,145-151
1o94 d1o94e_ E:1-7,36-54,114-120,145-151
1o95 d1o95e_ E:1-7,36-54,114-120,145-151
1efp d1efpb_ B:1-7,36-53,115-121,149-154
1efv d1efvb_ B:4-10,39-56,118-124,152-157
1efp d1efpd_ D:1-7,36-53,115-121,149-154
2a1u d2a1ub1 B:4-10,39-56,118-124,152-157
1t9g d1t9gs_ S:4-10,39-56,118-124,152-157
1o95 d1o95d_ D:1-7,15-29,89-95,117-125
1o95 d1o95f_ F:1-7,15-29,89-95,117-125
3clu d3clud1 D:1-7,15-29,89-95,118-125
1o96 d1o96d1 D:1-7,15-29,89-95,118-125
1o96 d1o96b1 B:1-7,15-29,89-95,118-125
3cls d3clsd1 D:1-7,15-29,89-95,118-125
3clr d3clrd1 D:1-7,15-29,89-95,118-125
3clt d3cltd1 D:1-7,15-29,89-95,118-125
1o94 d1o94d_ D:1-7,15-29,89-95,118-125
1o97 d1o97d1 D:1-7,15-29,89-95,118-125
1o96 d1o96f1 F:1-7,15-29,89-95,118-125
1o94 d1o94f_ F:1-7,15-29,89-95,118-125
1o96 d1o96z1 Z:1-7,15-29,89-95,118-125
1efp d1efpa1 A:2-7,15-27,85-91,114-119
3. d.261.1 Hypothetical protein PH1602
Hypothetical protein PH1602 complex alpha+beta fold; contains a region of similarity to the ferredoxin-like fold
1uc2 d1uc2b_ B:24-30,42-53,58-64,66-70
1uc2 d1uc2a_ A:24-30,42-53,58-64,66-70
1uc2 d1uc2a_ A:24-30,31-42,58-64,66-70
1uc2 d1uc2b_ B:24-30,31-42,58-64,66-70
4. c.82.1 ALDH-like binds NAD differently from other NAD(P)-dependent oxidoreductases !
ALDH-like consists of two similar domains with 3 layers (a/b/a) each; duplication ! core: parallel beta-sheet of 5 strands, order 32145
1o20 d1o20a_ A:115-122,124-139,197-203,381-386
5. b.40.2 Bacterial enterotoxins
OB-fold barrel, closed or partly opened n=5, S=10 or S=8; greek-key
1r4p d1r4pc_ C:25-31,32-46,58-62,63-69
2ga4 d2ga4c1 C:25-31,32-46,58-62,64-69
2bos d2bosb_ B:226-232,233-247,259-263,265-269
1qoh d1qohp_ P:126-132,133-147,159-163,165-169
1qoh d1qohl_ L:226-232,233-247,259-263,265-269
2bos d2bose_ E:526-532,533-547,559-563,565-569
2bos d2bosc_ C:326-332,333-347,359-363,365-369
1qoh d1qohf_ F:126-132,133-147,159-163,165-169
1qoh d1qohs_ S:426-432,433-447,459-463,465-469
1qoh d1qohi_ I:426-432,433-447,459-463,465-469
1qoh d1qohn_ N:426-432,433-447,459-463,465-469
1qoh d1qoha_ A:126-132,133-147,159-163,165-169
1qoh d1qohb_ B:226-232,233-247,259-263,265-269
1qoh d1qohg_ G:226-232,233-247,259-263,265-269
1qoh d1qohc_ C:326-332,333-347,359-363,365-369
1qoh d1qoho_ O:526-532,533-547,559-563,565-569
1qoh d1qohh_ H:326-332,333-347,359-363,365-369
1qoh d1qohq_ Q:226-232,233-247,259-263,265-269
2ga4 d2ga4f1 F:25-31,32-46,58-62,64-69
6. c.94.1 Periplasmic binding protein-like II Similar in architecture to the superfamily I but partly differs in topology !
Periplasmic binding protein-like II consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication ! mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
1uqw d1uqwb_ B:5-13,25-36,216-220,479-483
1uqw d1uqwa_ A:5-12,25-36,216-220,479-483
7. c.26.1 Nucleotidylyl transferase
Adenine nucleotide alpha hydrolase-like core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145
1i2d d1i2da2 A:192-199,203-218,286-292,339-345
1i2d d1i2dc2 C:192-199,203-218,286-292,339-345
1i2d d1i2db2 B:192-199,203-218,286-292,339-345
1jee d1jeea2 A:190-197,201-216,284-290,337-343
1jee d1jeeb2 B:190-197,201-216,284-290,337-343
1g8g d1g8gb2 B:190-197,201-216,284-290,337-343
1v47 d1v47a2 A:157-164,168-182,251-257,298-303
1v47 d1v47b2 B:157-164,168-182,251-257,298-303
8. b.81.1 Trimeric LpxA-like enzymes superhelical turns are made of three short strands; duplication: the sequence hexapeptide repeats correspond to individual strands !
Single-stranded left-handed beta-helix superhelix turns are made of parallel beta-strands and (short) turns
2q4j d2q4jb1 B:392-397,402-411,420-426,427-433
2icx d2icxa1 A:392-397,402-411,420-426,427-433
1z90 d1z90b1 B:392-397,402-411,420-426,427-433
2icy d2icyb1 B:392-397,402-411,418-426,427-433
2icx d2icxb1 B:392-397,402-411,418-426,427-433
1z90 d1z90a1 A:392-397,402-411,418-426,427-433
2icy d2icya1 A:392-397,402-411,418-426,427-433
2q4j d2q4ja1 A:392-397,402-411,418-426,427-433
9. b.40.4 Nucleic acid-binding proteins
OB-fold barrel, closed or partly opened n=5, S=10 or S=8; greek-key
1e22 d1e22a1 A:91-100,104-116,133-140,140-148
1e1o d1e1oa1 A:91-100,104-112,133-140,140-148
10. c.143.1 CofD-like
CofD-like 3 layers: a/b/a, parallel beta-sheet of 7 strands, order 3214567; topological similarity to the CobT-like fold (scop_cf 52732)
2hzb d2hzbd1 D:3-11,12-26,179-186,297-302
2hzb d2hzbc1 C:3-11,11-21,179-186,297-302
11. d.92.1 Metalloproteases ("zincins"), catalytic domain
Zincin-like contains mixed beta sheet with connection over free side of the sheet
1lnc d1lnce_ E:37-44,64-89,97-105,129-133
1lne d1lnee_ E:37-44,64-89,97-105,129-133
1z9g d1z9ge1 E:37-44,64-89,97-105,129-133
1zdp d1zdpe1 E:37-44,64-89,97-105,129-133
1fj3 d1fj3a_ A:37-47,64-89,97-105,129-133
1fjv d1fjva_ A:37-47,64-89,97-105,129-133
1os0 d1os0a_ A:37-47,64-89,97-105,129-133
1fjo d1fjoa_ A:37-47,64-89,97-105,129-133
1fjw d1fjwa_ A:37-47,64-89,97-105,129-133
12. c.56.5 Zn-dependent exopeptidases core: mixed beta-sheet of 8 strands, order 12435867; strands 2, 6 & 7 are antiparallel to the rest !
Phosphorylase/hydrolase-like core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops
1vho d1vhoa2 A:58-66,168-189,219-228,309-314
1ylo d1yloe2 E:54-64,164-184,215-224,310-315
1ylo d1ylod2 D:54-64,164-184,215-224,310-315
1ylo d1yloa2 A:54-64,164-184,215-224,310-315
1ylo d1ylob2 B:54-64,164-184,215-224,310-315
1ylo d1yloc2 C:54-64,164-184,215-224,310-315
1ylo d1ylof2 F:54-64,164-184,215-224,310-315
13. c.61.1 PRTase-like
PRTase-like core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 321456; strand 3 is antiparallel to the rest
1w30 d1w30b_ B:49-55,56-75,111-121,174-181
2igb d2igba1 A:32-39,39-58,96-106,159-166
2igb d2igbb1 B:32-39,39-58,96-106,159-166
1non d1nonc_ C:32-39,39-58,98-106,159-166
1non d1nonb_ B:32-39,39-58,96-106,159-166
1xz8 d1xz8a1 A:32-39,39-58,98-106,159-166
1non d1nona_ A:32-39,39-58,98-106,159-166
1xz8 d1xz8b1 B:32-39,39-58,98-106,159-166
1xzn d1xzna1 A:32-39,39-58,96-106,159-166
1non d1nond_ D:32-39,39-58,96-106,159-166
1ufr d1ufrd_ D:33-40,40-59,95-105,157-165
1a4x d1a4xa_ A:34-40,40-59,97-107,159-167
1ufr d1ufrc_ C:33-40,40-59,95-105,157-165
1ufr d1ufra_ A:33-40,40-59,95-105,157-165
1ufr d1ufrb_ B:33-40,40-59,95-105,157-165
1a4x d1a4xb_ B:34-40,40-59,97-107,159-167
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 117 (enumeration index: query21) of S4
3ms3 A:37-44,64-89,97-105,129-133
2ffu A:137-145,148-164,219-224,226-230
3eeb B:31-38,41-56,83-96,174-179
3eeb A:31-38,41-56,83-96,174-179
2jz7 A:7-11,32-48,50-54,65-73
2jz7 E:7-11,32-48,50-54,65-73
3juk B:3-9,34-47,122-128,130-135
3juk A:3-9,34-47,122-128,130-135
3juk D:3-9,34-47,122-128,130-135
3juk C:3-9,34-47,122-128,130-135
3g17 E:4-9,11-26,64-69,124-138
3g17 C:4-9,11-26,64-69,124-138
3g17 G:4-9,11-26,64-69,124-138
3g17 H:4-9,11-26,64-69,124-138
3g17 B:4-9,11-26,64-69,124-138
3g17 A:4-9,11-26,64-69,124-138
3g17 D:4-9,11-26,64-69,124-138
3lw6 A:76-84,86-105,139-145,147-151
2o1f A:115-123,122-141,205-211,213-217
2epg B:21-27,28-39,57-63,65-69
2epg A:21-27,40-52,57-63,65-69
2epg A:21-27,28-39,57-63,65-69
2epg B:21-27,40-52,57-63,65-69
2gak A:122-130,132-144,210-218,219-223
2gak B:122-130,132-144,211-218,219-223
3rmv A:3-11,12-30,96-102,104-108
2w61 A:55-59,85-100,301-311,325-330
2agd C:176-185,187-197,242-248,250-254
2agd B:176-185,187-197,242-248,250-254
2agd C:176-185,196-206,242-248,250-254
2agd A:176-185,196-206,242-248,250-254
2agd A:176-185,187-197,242-248,250-254
2agd B:176-185,196-206,242-248,250-254
2o1g A:115-123,122-141,205-211,213-217
3ssb A:37-44,64-89,97-105,129-133
3hl3 A:0-8,32-45,100-107,108-112
3mxg E:25-31,32-46,58-62,63-69
3mxg B:25-31,32-46,58-62,63-69
3mxg I:25-31,32-46,58-62,64-69
3mxg A:25-31,32-46,58-62,64-69
3mxg C:25-31,32-46,58-62,63-69
3u2u B:3-11,12-30,96-102,104-108
3u2u A:3-11,12-30,96-102,104-108
3t7m B:3-11,12-30,96-102,104-108
3t7m A:3-11,12-30,96-102,104-108
3qvb A:3-11,12-30,96-102,104-108
2qjf B:413-421,425-443,516-522,569-575
2aes A:176-185,196-206,242-248,250-254
2aes C:176-185,187-197,242-248,250-254
2aes A:176-185,187-197,242-248,250-254
2aes B:176-185,196-206,242-248,250-254
2aes C:176-185,196-206,242-248,250-254
2aes B:176-185,187-197,242-248,250-254
3msa A:37-47,64-89,97-105,129-133
3fv4 A:37-47,64-89,97-105,129-133
3i0j A:115-122,122-141,205-211,213-217
2qo3 B:365-370,378-397,418-422,423-428
2qo3 A:365-370,378-397,418-422,423-428
3gue B:407-412,418-427,435-443,444-450
3gue A:407-412,418-427,435-443,444-450
3ioj A:115-122,122-141,205-211,213-217
3ioj B:115-122,122-141,205-211,213-217
3oh3 A:495-501,509-518,528-535,536-541
2aec C:176-185,187-197,242-248,250-254
2aec B:176-185,196-206,242-248,250-254
2aec C:176-185,196-206,242-248,250-254
2aec B:176-185,187-197,242-248,250-254
2aec A:176-185,187-206,242-248,250-254
2rj7 A:115-122,122-141,205-211,213-217
2p72 A:5-12,17-35,72-78,80-84
2p72 B:5-11,17-35,72-78,80-84
2wgz B:128-136,135-155,219-225,227-231
2wgz A:128-136,135-155,219-225,227-231
2whz A:37-44,64-89,97-105,129-133
2ux8 F:7-14,38-51,125-131,133-138
2ux8 C:7-14,38-51,125-131,133-138
2ux8 H:7-14,38-51,125-131,133-138
2ux8 A:7-14,38-51,125-131,133-138
2ux8 B:7-14,38-51,125-131,133-138
2ux8 E:7-14,38-51,125-131,133-138
2ux8 D:7-14,38-51,125-131,133-138
2ux8 G:7-14,38-51,125-131,133-138
3u2w B:3-11,12-30,96-102,104-108
3u2w A:3-11,12-30,96-102,104-108
2ggq A:2-8,32-45,91-98,99-103
3k9d A:108-117,120-136,193-198,419-424
3k9d D:110-117,120-136,193-198,419-424
3k9d B:108-117,120-136,193-198,419-424
3k9d C:108-117,120-136,193-198,419-424
2d7r A:146-154,157-173,231-237,239-243
3pee A:34-42,44-59,101-111,200-205
3pee B:34-42,44-59,101-111,200-205
2oef A:412-417,423-432,440-448,449-455
2y5d A:150-157,160-176,226-234,492-499
3ih5 B:1-7,15-33,90-96,120-131
3ih5 C:2-7,15-33,90-96,120-131
3ih5 A:2-7,15-33,90-96,120-131
3ih5 D:1-7,15-33,90-96,120-130
2vxm A:128-136,143-155,219-225,227-231
3i0e A:115-123,122-141,205-211,213-217
3i0i X:115-122,122-141,205-211,213-217
2p73 A:5-11,17-35,72-78,80-84
2y53 A:150-157,160-176,226-234,492-498
3u2t A:3-11,12-30,96-102,104-108
3ioi A:115-122,122-141,205-211,213-217
2pgv A:115-122,122-141,205-211,213-217
3ioh A:115-123,122-141,205-211,213-217
3oh2 A:495-501,509-518,528-535,536-541
3oh1 A:495-501,509-518,528-535,536-541
2xme E:19-26,46-59,109-116,117-121
2xme K:18-26,46-59,109-116,117-121
2xme L:19-25,46-59,109-116,117-121
2xme J:18-26,46-59,109-116,117-121
2xme H:18-25,46-59,109-116,117-121
2xme I:19-26,46-59,109-116,117-121
2xme F:18-26,46-59,109-116,117-121
2xme G:18-26,46-59,109-116,117-121
2xme D:18-26,46-59,109-116,117-121
2xme C:19-26,46-59,109-116,117-121
2xme A:18-26,46-59,109-116,117-121
2xme B:18-26,46-59,109-116,117-121
2o1h A:115-123,122-141,205-211,213-217
2y52 A:150-157,160-176,226-233,492-498
2y52 B:150-157,160-176,226-233,492-498
3pkp A:5-10,35-48,103-110,111-116
3pkp K:5-10,35-48,103-110,111-116
3pkp I:5-10,35-48,103-110,111-116
3pkp J:5-10,35-48,103-110,111-116
3pkp C:5-10,35-48,103-110,111-116
3pkp L:5-10,35-48,103-110,111-116
3pkp B:5-10,35-48,103-110,111-116
3pkp D:5-10,35-48,103-110,111-116
2rj6 A:115-122,122-141,205-211,213-217
2fya A:176-185,187-206,242-248,250-254
3fet A:1-8,9-21,68-74,97-104
3fet D:1-8,9-21,68-74,99-104
3i0l A:115-122,122-141,205-211,213-217
2ffv B:137-145,148-164,219-223,226-230
2ffv A:137-145,148-164,219-223,226-230
3rmw A:3-11,12-30,96-102,104-108
2x60 B:2-9,35-48,102-108,109-113
2d7i A:146-154,157-173,231-237,239-243
2pa4 D:13-20,44-57,134-140,142-146
2pa4 B:13-20,44-57,135-140,142-146
2pa4 A:13-19,44-57,135-140,142-146
2pa4 C:13-20,44-57,135-140,142-146
3oh4 A:495-501,509-518,528-535,536-541
3juj C:3-9,34-47,122-128,130-135
3juj B:3-10,34-47,122-128,130-135
3juj A:3-9,34-47,122-128,130-135
3juj D:3-9,34-47,122-128,130-135
3ogz A:495-501,509-518,528-535,536-541
2z87 A:151-159,161-175,233-240,241-245
2z87 B:151-159,161-175,233-240,241-245
3do0 A:37-44,64-89,97-105,129-133
3nvd A:451-460,461-479,508-515,584-588
3nvd B:451-460,461-479,508-515,584-588
2z86 D:151-159,161-175,233-240,241-245
2z86 C:151-159,161-175,233-240,241-245
2z86 B:151-159,161-175,233-240,241-245
2z86 A:151-159,161-175,233-240,241-245
3q4s A:3-11,12-30,96-102,104-108
2fy7 A:176-185,187-206,242-248,250-254
2rj0 A:115-123,122-141,205-211,213-217
3r2j B:25-32,48-63,149-156,210-214
2ikq B:453-459,460-475,558-564,593-597
2oeg A:412-417,423-432,440-448,449-455
3bmx A:451-460,461-479,508-515,584-588
3bmx B:451-460,461-479,508-515,584-588
3n21 A:37-44,64-89,97-105,129-133
2qh5 A:2-9,36-49,103-110,112-116
2qh5 B:2-9,36-50,103-110,112-116
3pkq A:5-10,35-48,103-110,111-116
3pkq C:5-10,35-48,103-110,111-116
3pkq B:5-10,35-48,103-110,111-116
3pkq D:5-10,35-48,103-110,111-116
3i0f A:115-123,122-141,205-211,213-217
3i0d A:115-123,122-141,205-211,213-217
2vxl A:128-136,143-155,219-225,227-231
3fzy A:3459-3466,3469-3484,3511-3524,3602-3607
3fzy B:3459-3466,3469-3484,3511-3524,3602-3607
2j0a A:55-63,66-78,136-143,144-148
3i0c A:115-122,122-141,205-211,213-217
3t7o B:4-11,12-30,96-102,104-108
3t7o A:3-11,12-30,96-102,104-108
2e3d B:10-15,40-53,129-135,137-141
2e3d C:10-16,40-53,129-135,137-141
2e3d D:9-16,40-53,129-135,137-141
2e3d A:10-16,40-53,129-135,137-141
3l6s A:97-106,272-292,349-359,453-458
3gcd C:31-38,41-56,83-96,174-179
3gcd D:31-38,41-56,83-96,174-179
3gcd A:31-38,41-56,83-96,174-179
2rj4 A:115-123,122-141,205-211,213-217
2nn3 D:58-68,81-97,127-136,225-230
2nn3 C:58-68,81-97,127-136,225-230
3ee5 C:176-185,187-197,242-248,250-254
3ee5 C:176-185,196-206,242-248,250-254
3ee5 A:176-185,196-206,242-248,250-254
3ee5 A:176-185,187-197,242-248,250-254
3ee5 B:176-185,196-206,242-248,250-254
3ee5 B:176-185,187-197,242-248,250-254
2vs3 B:128-136,135-155,219-225,227-231
2vs3 A:128-136,135-155,219-225,227-231
2c0n A:2-10,14-25,55-62,63-69
2pgy A:115-123,123-141,205-211,213-217
2hg4 E:362-366,375-394,415-419,420-425
2hg4 D:362-367,375-394,415-419,420-425
2hg4 A:362-367,375-394,415-419,420-425
3otk B:122-130,132-144,210-218,219-223
3otk D:122-130,132-144,210-218,219-223
3otk C:122-130,132-144,210-218,219-223
3otk A:122-130,132-144,211-218,219-223
3i0h A:115-122,123-141,205-211,213-217
2gam C:122-130,132-144,211-218,219-223
2gam D:122-130,132-144,211-218,219-223
2gam A:122-130,132-144,210-218,219-223
2gam B:122-130,132-144,211-218,219-223
3u2x B:3-11,12-30,96-102,104-108
3u2x A:3-11,12-30,96-102,104-108
2xmh D:18-26,46-59,109-116,117-121
2xmh E:18-26,46-59,109-116,117-121
2xmh C:19-26,46-59,109-116,117-121
2xmh B:18-25,46-59,109-116,117-121
2xmh F:19-25,46-59,109-116,117-121
2xmh A:18-25,46-59,109-116,117-121
3fxp A:37-47,64-89,97-105,129-133
2rj5 A:115-123,122-141,205-211,213-217
3oh0 A:495-501,509-518,528-535,536-541
3hhd B:319-324,332-351,373-377,378-383
3hhd A:319-324,332-351,373-377,378-383
3hhd D:319-324,332-351,373-377,378-383
3hhd C:319-324,332-351,373-377,378-383
2vro B:150-157,160-176,226-234,491-499
2vro A:150-157,160-176,226-234,492-499
3i0k A:115-123,122-141,205-211,213-217
3i44 A:142-149,152-168,221-228,453-460
3lk6 A:451-460,461-479,508-515,584-588
3lk6 B:451-460,461-479,508-515,584-588
3lk6 C:451-460,461-479,508-515,584-588
3lk6 D:451-460,461-479,508-515,584-588
2vs4 B:128-136,135-155,219-225,227-231
2vs4 A:128-136,135-155,219-225,227-231
2d0j A:80-89,91-109,178-185,187-191
2d0j C:80-89,91-109,178-185,187-191
2d0j B:80-89,91-109,178-185,187-191
2d0j D:80-89,91-109,178-185,187-191
2ah9 C:176-185,187-197,242-248,250-254
2ah9 C:176-185,196-206,242-248,250-254
2ah9 A:176-185,196-206,242-248,250-254
2ah9 A:176-185,187-197,242-248,250-254
2ah9 B:176-185,196-206,242-248,250-254
2ah9 B:176-185,187-197,242-248,250-254
2ae7 A:176-185,196-206,242-248,250-254
2ae7 C:176-185,187-197,242-248,250-254
2ae7 A:176-185,187-197,242-248,250-254
2ae7 B:176-185,196-206,242-248,250-254
2ae7 C:176-185,196-206,242-248,250-254
2ae7 B:176-185,187-197,242-248,250-254
2y51 B:150-157,160-176,226-233,492-498
2y51 A:150-157,160-176,226-234,492-498
2rj1 A:115-122,122-141,205-211,213-217
2fyb A:176-185,187-206,242-248,250-254
3i0g A:115-122,122-141,205-211,213-217
2ggo A:2-8,32-45,91-98,99-103
2j0b A:55-64,66-78,136-143,144-148
2x5z B:2-8,35-48,102-108,109-113
2riz A:115-123,122-141,205-211,213-217
3t7n A:4-11,12-30,96-102,104-108
3t7n B:3-11,12-30,96-102,104-108
2p6w A:5-12,17-35,72-78,80-84