1.   i.1.1         Ribosome and ribosomal fragments    
                   Ribosome and ribosomal fragments 
                   1eg0  d1eg0n_  N:140-150,153-157,161-171,173-192

2.   b.45.1        FMN-binding split barrel  related to the ferredoxin reductase-like FAD-binding domain !   
                   Split barrel-like barrel; n=6, S=10; greek-key
                   2fur  d2furb1  B:20-32,32-41,56-64,66-75
                   2fur  d2fura1  A:20-32,32-41,56-63,66-75

3.   d.95.2        Homing endonucleases    
                   Homing endonuclease-like alpha-beta(2)-alpha-beta(2)-alpha; 2 layers: a/b; antiparallel sheet 1243
                   1ef0  d1ef0b3  B:206-219,299-304,334-342,343-358
                   1um2  d1um2b3  B:486-502,582-587,617-625,626-641
                   1jva  d1jvab3  B:484-502,582-587,617-625,626-641
                   1dfa  d1dfaa3  A:200-219,299-304,334-342,343-358

4.   d.129.3       Bet v1-like  contains a single copy of this fold with a alpha-beta2 insertion after the first helix; there is a cavity between the beta-sheet and the long C-terminal helix !   
                   TBP-like beta-alpha-beta(4)-alpha
                   2bmo  d2bmoa2  A:192-203,292-299,379-383,407-425
                   2bmr  d2bmra2  A:192-203,292-299,379-383,407-425
                   2bmq  d2bmqa2  A:192-203,292-299,379-383,407-425
                   1o7h  d1o7ha2  A:194-205,294-301,381-385,410-427
                   1o7m  d1o7ma2  A:194-205,294-301,381-385,410-427
                   2hmm  d2hmma2  A:194-205,294-301,381-385,410-427
                   2hml  d2hmla2  A:194-205,294-301,381-385,410-427
                   2hmo  d2hmoa2  A:194-205,294-301,381-385,410-427
                   1o7w  d1o7wa2  A:194-205,294-301,381-385,410-427
                   2hmn  d2hmna2  A:194-205,294-301,381-385,410-427
                   1o7g  d1o7ga2  A:194-205,294-301,381-385,410-427
                   1ndo  d1ndoc2  C:194-205,294-301,381-385,410-427
                   1o7n  d1o7na2  A:194-205,294-301,381-385,410-427
                   1o7p  d1o7pa2  A:194-205,294-301,381-385,410-427
                   1ndo  d1ndoe2  E:194-205,294-301,381-385,410-427
                   2hmj  d2hmja2  A:194-205,294-301,381-385,410-427
                   1uuv  d1uuva2  A:194-205,294-301,381-385,410-427
                   2hmk  d2hmka2  A:194-205,294-301,381-385,410-427
                   1eg9  d1eg9a2  A:194-205,294-301,381-385,410-427
                   1ndo  d1ndoa2  A:194-205,294-301,381-385,410-427
                   1uuw  d1uuwa2  A:194-205,294-301,381-385,410-427
                   2b1x  d2b1xc2  C:202-213,292-299,391-395,420-437
                   2b1x  d2b1xa2  A:202-213,291-299,391-395,420-437
                   2b1x  d2b1xe2  E:202-213,291-299,391-395,420-437

5.   e.29.1        beta and beta-prime subunits of DNA dependent RNA-polymerase  The catalytic site is formed by the association of two double-psi beta-barrel domains, one from each subunit !   
                   beta and beta-prime subunits of DNA dependent RNA-polymerase Multidomain subunits of complex domain organization
                   2a6h  d2a6hd1  D:174-186,209-215,218-223,225-233
                   2a6e  d2a6en1  N:174-186,209-215,219-223,225-233
                   2a6e  d2a6ed1  D:174-186,209-215,219-223,225-233
                   2a6h  d2a6hn1  N:174-186,209-215,218-223,225-233
                   1i6h  d1i6ha_  A:1127-1140,1271-1276,1296-1310,1312-1320

6.   i.8.1         RNA polymerase    
                   RNA polymerase 
                   1nik  d1nika_  A:1127-1140,1271-1276,1296-1310,1312-1320
                   1r9s  d1r9sa_  A:1127-1140,1271-1276,1296-1310,1312-1320
                   1nt9  d1nt9a_  A:1127-1140,1271-1276,1296-1310,1312-1320
                   1pqv  d1pqva_  A:1127-1140,1271-1276,1296-1310,1312-1320
                   1r5u  d1r5ua_  A:1127-1140,1271-1276,1296-1310,1312-1320

List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 193 (enumeration index: query232) of S4

3ba3  A:2-14,14-23,41-49,51-60
3k1q  D:201-221,244-251,261-270,277-295
3p96  A:147-166,167-174,371-375,378-387
3i82  A:44-60,61-69,122-131,133-140
2x0i  A:164-180,190-194,282-295,308-330
3io0  A:122-137,139-150,193-203,204-213
2hhz  A:2-14,14-23,40-47,50-60
2gbw  A:193-204,292-299,379-383,407-424
2gbw  E:193-204,292-299,379-383,407-423
2gbw  C:193-204,292-299,379-383,407-424
2ckf  E:193-204,291-299,379-383,407-424
2ckf  C:193-204,292-299,379-383,407-424
2ckf  A:193-204,292-299,379-383,407-424
2gbx  E:193-204,292-299,379-383,406-424
2gbx  C:193-204,292-299,379-383,406-424
2gbx  A:193-204,292-299,379-383,406-424
3lc6  A:289-308,332-339,376-382,386-398
3iyl  U:202-221,245-251,261-270,277-295
3iyl  V:202-221,245-251,261-270,277-295
3lcb  A:289-309,311-315,376-382,386-398
3lcb  B:289-309,332-339,376-382,386-398
3lcb  B:289-309,311-315,376-382,386-398
3lcb  A:289-309,332-339,376-382,386-398
3mpv  A:44-60,61-69,122-131,133-141
3gvh  D:145-162,171-176,269-274,291-317
2q9k  A:10-20,20-28,49-57,59-69
2ylx  A:195-209,210-217,221-225,319-328
3gfh  B:44-60,61-69,122-131,133-140
3gfh  A:44-60,61-69,122-131,133-140
3eps  B:289-309,311-315,376-382,386-398
3eps  B:289-309,332-339,376-382,386-398
3eps  A:289-308,332-339,376-382,386-398