Observed motif hits of pattern ID: 164 (enumeration index: query25) of S4

List of motif hits in the counted superfamilies for pattern ID: 164 (enumeration index: query25) of S4

2.   d.261.1       Hypothetical protein PH1602    
                   Hypothetical protein PH1602 complex alpha+beta fold; contains a region of similarity to the ferredoxin-like fold
                   1uc2  d1uc2b_  B:42-53,58-64,66-70,71-75
                   1uc2  d1uc2a_  A:42-53,58-64,66-70,71-75
                   1uc2  d1uc2b_  B:31-42,58-64,66-70,71-75
                   1uc2  d1uc2a_  A:31-42,58-64,66-70,71-75

15.  c.143.1       CofD-like    
                   CofD-like 3 layers: a/b/a, parallel beta-sheet of 7 strands, order 3214567; topological similarity to the CobT-like fold (scop_cf 52732)
                   2hzb  d2hzbb1  B:257-268,268-272,292-296,297-301
                   2hzb  d2hzba1  A:257-268,268-272,292-296,297-301
                   2hzb  d2hzbc1  C:257-268,268-272,291-296,297-302
                   2hzb  d2hzbd1  D:257-268,268-272,291-296,297-302

16.  e.48.1        Major capsid protein VP5    
                   Major capsid protein VP5 large protein without apparent domain division
                   1no7  d1no7a_  A:497-510,824-831,905-913,927-935
                   1no7  d1no7b_  B:497-510,825-831,905-913,927-935

18.  b.144.1       Trimeric adhesin    
                   Trimeric adhesin trimer; contains two different beta-prism-like domains connected by an linker subdomain of less regular structure
                   1s7m  d1s7mc_  C:609-619,622-626,654-662,667-674
                   1s7m  d1s7mf_  F:609-619,622-626,654-662,667-674
                   1s7m  d1s7me_  E:609-619,622-626,654-662,667-674
                   1s7m  d1s7md_  D:609-618,622-626,654-662,667-674
                   1s7m  d1s7ma_  A:609-618,622-626,654-662,667-674
                   1s7m  d1s7mb_  B:609-619,622-626,654-662,667-674

19.  d.152.1       Aldehyde ferredoxin oxidoreductase, N-terminal domain    
                   Aldehyde ferredoxin oxidoreductase, N-terminal domain contains sandwich; duplication of alpha+beta motif with single mixed sheet ! motif: beta(2)-alpha-beta(3)-alpha-beta; strand order 216345, strands 1 and 6 are parallel
                   1b4n  d1b4nd2  D:95-105,107-114,118-125,126-133
                   1aor  d1aorb2  B:96-106,107-115,119-126,127-134
                   1b25  d1b25b2  B:95-105,107-114,118-125,126-133
                   1b25  d1b25a2  A:95-105,107-114,118-125,126-133
                   1b4n  d1b4nb2  B:95-105,107-114,118-125,126-133
                   1aor  d1aora2  A:96-106,107-115,119-126,127-134

20.  e.62.1        Heme iron utilization protein-like    
                   Heme iron utilization protein-like 2 domains; d1 - 3-helical bundle similar to the homeodomain-like fold; d2 - 6-stranded beta-barrel capped by two helices at one end,  similar topology to the PH-like fold
                   2hq2  d2hq2a1  A:222-237,273-279,284-294,295-306
                   2j0r  d2j0ra1  A:225-240,276-283,287-297,298-309
                   1u9t  d1u9ta1  A:222-237,273-280,283-294,295-306
                   2j0p  d2j0pa1  A:225-240,276-283,287-297,298-309

22.  d.256.1       Ta1353-like    
                   Ta1353-like core: beta-alpha-beta(2)-alpha-beta-alpha-beta; 3 layers: a/b/a; antiparallel beta-sheet of 5 strands; order: 51423;
                   1vgg  d1vgga_  A:62-77,79-87,115-124,125-135
                   1vgg  d1vggf_  F:62-77,79-87,115-124,125-135
                   1vgg  d1vggd_  D:62-77,79-87,115-124,125-135
                   1vgg  d1vgge_  E:62-77,79-87,115-124,125-135
                   1vgg  d1vggb_  B:62-77,79-87,115-124,125-135
                   1vgg  d1vggc_  C:62-77,79-87,115-124,125-135
                   1rlh  d1rlha_  A:55-70,72-81,107-116,117-127

34.  c.52.4        TBP-interacting protein-like  contains extra C-terminal alpha+beta domain of complex fold with an embeded C2H2 zinc-finger  
                   Restriction endonuclease-like core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest
                   2czr  d2czra1  A:85-101,112-122,140-150,180-187