3. d.131.1 DNA clamp DNA clamp contains two helices and two beta sheets ! duplication: fold has internal pseudo two-fold symmetry 1vyj d1vyji2 I:140-156,208-219,224-230,234-240 1plr d1plra2 A:140-156,208-222,224-230,234-240 2od8 d2od8a2 A:140-155,208-219,224-230,234-240 1unn d1unna3 A:259-274,320-332,335-341,346-352 3d1f d3d1fa3 A:259-274,320-332,335-341,346-352 1unn d1unnb3 B:259-274,320-332,335-341,346-352 3d1f d3d1fb3 B:259-274,320-332,335-341,346-352 1mmi d1mmia3 A:259-274,320-332,335-341,345-352 3bep d3bepa3 A:259-274,320-332,335-341,345-352 2pol d2pola3 A:259-274,320-332,335-341,345-352 3d1g d3d1gb3 B:259-274,320-332,335-341,345-352 3bep d3bepb3 B:259-274,320-332,335-341,345-352 1rxz d1rxza1 A:7-23,70-82,86-92,95-102 3d1e d3d1ea3 A:259-274,320-332,335-341,345-352 1sxj d1sxjh2 H:140-156,208-217,224-230,234-242 3d1g d3d1ga3 A:259-274,320-332,335-341,345-352 1mmi d1mmib3 B:259-274,320-332,335-341,345-352 2pol d2polb3 B:259-274,320-332,335-341,345-352 1vyj d1vyjk2 K:140-156,208-219,224-230,234-242 1ok7 d1ok7a3 A:259-274,320-332,335-341,345-352 1ok7 d1ok7b1 B:6-19,71-83,87-93,95-102 1ul1 d1ul1b2 B:140-156,208-219,224-230,233-242 1w60 d1w60a2 A:140-155,208-219,224-230,234-242 1rxm d1rxma1 A:7-22,70-82,86-92,95-102 1ok7 d1ok7b3 B:259-274,320-332,335-341,345-352 1u76 d1u76c2 C:140-156,208-219,224-230,234-242 1vyj d1vyja2 A:140-156,208-219,224-230,234-242 1axc d1axce2 E:140-156,208-219,224-230,234-242 1u76 d1u76a2 A:140-156,208-219,224-230,234-242 1rwz d1rwza1 A:7-22,70-82,86-92,95-102 1w60 d1w60b2 B:140-155,208-219,224-230,234-242 1ul1 d1ul1c2 C:140-156,208-219,224-230,234-242 1sxj d1sxjf1 F:8-20,71-83,86-93,97-105 1vym d1vymb2 B:140-156,208-219,224-230,234-242 1sxj d1sxjg1 G:8-20,71-83,86-93,97-105 1u76 d1u76e2 E:140-155,208-219,224-230,234-242 1vym d1vymc2 C:140-156,208-219,224-230,234-242 1axc d1axca2 A:140-155,208-219,224-230,233-242 1w60 d1w60b1 B:8-24,71-83,86-93,97-105 1vyj d1vyjc2 C:140-156,208-219,224-230,234-242 1u7b d1u7ba2 A:140-155,208-219,224-230,234-242 1axc d1axcc2 C:140-155,208-219,224-230,234-242 1vyj d1vyje2 E:141-156,208-219,224-230,234-240 3d1e d3d1eb3 B:259-274,320-332,335-340,345-352 1ul1 d1ul1a2 A:140-156,208-219,224-230,233-242 1dml d1dmle2 E:181-193,272-282,284-292,297-305 1w60 d1w60a1 A:8-24,71-83,86-93,97-105 1dml d1dmlg2 G:181-193,272-282,284-292,297-305 1jqj d1jqjb2 B:131-146,196-208,213-220,221-228 1vyj d1vyjc1 C:8-24,71-83,86-93,97-105 1ul1 d1ul1c1 C:8-24,71-83,86-93,97-105 1plq d1plqa2 A:140-152,208-219,224-230,234-242 1vym d1vyma2 A:140-155,208-219,224-230,234-242 1jqj d1jqja2 A:131-146,196-208,213-220,221-228 1unn d1unnb2 B:131-146,196-208,213-220,221-228 1vyj d1vyjg2 G:140-155,208-219,224-230,234-242 1axc d1axce1 E:8-24,71-83,86-93,97-105 1plq d1plqa1 A:8-20,71-83,86-93,97-105 1vyj d1vyja1 A:8-24,71-83,86-93,97-105 1sxj d1sxjg2 G:140-152,208-219,224-230,234-242 1unn d1unna2 A:131-146,196-208,213-220,221-228 1plr d1plra1 A:8-20,71-82,84-93,97-105 1jql d1jqla2 A:131-146,196-208,213-220,221-228 1jql d1jqla3 A:259-275,320-332,335-341,346-352 1vym d1vymc1 C:8-24,71-83,86-93,97-105 1mmi d1mmia2 A:131-146,196-208,213-220,221-228 3bep d3bepa2 A:131-146,196-208,213-220,221-228 1ul1 d1ul1b1 B:8-24,71-83,86-93,97-105 3d1g d3d1ga2 A:131-146,196-208,213-220,221-228 3d1f d3d1fb2 B:131-146,196-208,213-220,221-228 1isq d1isqa1 A:9-25,72-83,87-94,97-105 3d1e d3d1ea2 A:131-146,196-208,213-220,221-228 3d1f d3d1fa2 A:131-146,196-208,213-220,221-228 2pol d2pola2 A:131-146,196-208,213-220,221-228 2pol d2polb2 B:131-146,196-208,213-220,221-228 1ok7 d1ok7a2 A:131-146,196-208,213-220,221-228 3d1g d3d1gb2 B:131-146,196-208,213-220,221-228 1mmi d1mmib2 B:131-146,196-208,213-220,221-228 1ok7 d1ok7b2 B:131-146,196-208,213-220,221-228 3bep d3bepb2 B:131-146,196-208,213-220,221-228 3d1e d3d1eb2 B:131-146,196-208,213-220,221-228 1vpk d1vpka2 A:130-145,194-208,212-219,220-227 1iz5 d1iz5a2 A:137-152,200-211,215-223,224-233 2od8 d2od8a1 A:8-24,71-82,86-93,97-105 1sxj d1sxjf2 F:140-155,208-223,224-230,234-242 1iz4 d1iz4a1 A:9-25,72-84,87-94,97-105 1ge8 d1ge8a1 A:9-25,72-84,87-94,97-105 1iz5 d1iz5a1 A:9-24,72-83,87-94,97-105 1iz5 d1iz5b1 B:9-24,72-83,87-94,97-105 1axc d1axca1 A:8-24,71-83,85-93,97-106 1vpk d1vpka3 A:258-276,319-331,334-340,345-351 1ud9 d1ud9b1 B:7-23,70-82,85-91,95-102 1vym d1vymb1 B:8-20,71-82,85-93,97-106 1ud9 d1ud9d1 D:7-23,70-82,85-91,95-103 1axc d1axcc1 C:8-24,71-83,85-93,97-106 1vyj d1vyjg1 G:8-24,71-83,85-93,97-106 1vyj d1vyji1 I:8-24,71-83,85-93,97-106 1sxj d1sxjh1 H:8-20,71-83,85-93,97-106 1u7b d1u7ba1 A:8-24,71-83,85-93,97-106 1ul1 d1ul1a1 A:8-24,71-83,85-93,97-106 1ud9 d1ud9c1 C:7-23,70-82,85-91,95-103 1vpk d1vpka1 A:6-21,71-82,86-93,94-101 1vyj d1vyje1 E:8-24,71-83,85-93,97-106 1dml d1dmla2 A:181-192,272-282,285-292,296-304 1rxz d1rxza2 A:134-149,194-206,209-216,219-228 1u76 d1u76c1 C:8-24,71-83,85-93,97-106 1dml d1dmlc2 C:181-192,272-282,285-292,296-304 1ud9 d1ud9a1 A:7-23,70-82,85-91,95-103 1u76 d1u76e1 E:8-24,71-83,85-93,97-106 1u76 d1u76a1 A:8-24,71-83,85-93,97-106 1iz4 d1iz4a2 A:138-149,200-209,215-223,224-233 1jql d1jqla1 A:6-19,71-83,87-94,95-102 1mmi d1mmib1 B:6-21,71-83,87-94,95-102 1rwz d1rwza2 A:134-149,194-206,209-216,219-228 2pol d2polb1 B:6-21,71-83,87-94,95-102 1rxm d1rxma2 A:134-149,194-206,209-216,219-228 1iz5 d1iz5b2 B:137-152,200-211,216-223,224-233 1vym d1vyma1 A:8-24,71-83,85-93,97-106 1mmi d1mmia1 A:6-21,71-83,87-94,95-102 1vyj d1vyjk1 K:8-24,71-83,85-93,97-106 1yyp d1yypa2 A:150-161,222-237,239-246,250-258 1ud9 d1ud9b2 B:135-150,204-212,213-220,221-231 1jqj d1jqjb3 B:259-275,320-332,334-341,345-352 1jqj d1jqja3 A:259-275,320-332,334-341,345-352 1unn d1unna1 A:6-22,71-83,87-94,95-102 3d1f d3d1fa1 A:6-19,71-83,87-94,95-102 1unn d1unnb1 B:6-22,71-83,87-94,95-102 1jqj d1jqja1 A:6-19,71-82,87-94,95-102 1jqj d1jqjb1 B:6-19,71-82,87-94,95-102 3bep d3bepb1 B:6-19,71-83,87-94,95-102 1ok7 d1ok7a1 A:6-21,71-83,87-94,95-102 3d1e d3d1eb1 B:6-19,71-83,87-94,95-102 3bep d3bepa1 A:6-22,71-83,87-94,95-102 2pol d2pola1 A:6-22,71-83,87-94,95-102 3d1f d3d1fb1 B:6-22,71-83,87-94,95-102 3d1g d3d1gb1 B:6-19,71-83,87-94,95-102 3d1e d3d1ea1 A:6-22,71-83,87-94,95-102 1t6l d1t6la2 A:150-162,222-237,239-247,249-258 4. d.161.1 ADC synthase the active site is formed by additional structures inserted into the core structure ! ADC synthase duplication: contains four repeats of alpha-beta(2)-beta motif arranged in a 4 layer core structure: alpha/beta/beta/alpha; orthogonally packed beta-sheets 1k0g d1k0ga_ A:16-26,225-238,238-248,249-257 1k0g d1k0gb_ B:16-26,225-238,238-248,249-257 1k0e d1k0ea_ A:16-28,225-238,238-248,249-257 2g5f d2g5fd1 D:25-42,219-232,235-242,243-251 2g5f d2g5fb1 B:25-39,219-232,234-242,243-251 1k0e d1k0eb_ B:16-28,225-238,238-248,249-257 2g5f d2g5fc1 C:25-42,219-232,234-242,243-251 1qdl d1qdla_ A:57-69,320-329,358-366,368-376 2fn0 d2fn0a1 A:13-28,207-220,222-230,231-239 1i7s d1i7sa_ A:20-30,276-289,291-299,300-307 2g5f d2g5fd1 D:87-101,348-357,386-394,396-404 1i1q d1i1qa_ A:20-30,276-289,291-299,300-307 2fn1 d2fn1a1 A:13-28,207-220,222-230,231-239 1i7s d1i7sc_ C:20-30,276-289,291-299,300-307 2g5f d2g5fa1 A:25-39,219-232,234-242,243-251 2g5f d2g5fc1 C:87-104,348-357,386-394,396-404 2i6y d2i6ya1 A:25-42,219-232,234-242,243-250 2g5f d2g5fa1 A:87-101,348-357,386-394,396-404 2fn0 d2fn0b1 B:12-28,207-220,222-230,231-239 2g5f d2g5fb1 B:87-104,348-357,386-394,396-404 2fn1 d2fn1b1 B:12-28,207-220,222-230,231-239 1i7q d1i7qa_ A:20-30,276-289,291-299,300-308 1i7q d1i7qc_ C:20-30,276-289,291-299,300-308 2i6y d2i6ya1 A:87-103,348-357,385-394,396-404 2eua d2euaa1 A:39-48,206-219,220-229,231-239 1k0g d1k0gb_ B:78-91,353-362,391-399,401-409 1k0e d1k0ea_ A:78-91,353-362,391-399,401-409 3bzm d3bzma1 A:39-48,206-219,220-229,231-239 2eua d2euab1 B:39-48,206-219,220-229,231-239 1k0e d1k0eb_ B:78-91,353-362,391-399,401-409 1k0g d1k0ga_ A:78-91,353-362,391-399,401-409 3bzn d3bzna1 A:75-87,331-340,369-377,378-386 3bzm d3bzma1 A:75-87,331-340,369-377,378-386 3bzn d3bzna1 A:39-48,206-219,220-229,231-239 2eua d2euaa1 A:75-87,331-340,369-377,378-386 2eua d2euab1 B:75-87,331-340,369-377,378-386 1qdl d1qdla_ A:11-24,192-205,207-215,216-223 1i7q d1i7qa_ A:122-135,412-421,450-458,460-467 1i7q d1i7qc_ C:122-135,412-421,450-458,460-467 1i7s d1i7sc_ C:122-135,412-421,450-458,460-468 1i7s d1i7sa_ A:122-135,412-421,450-458,460-468 1i1q d1i1qa_ A:122-135,412-421,450-458,460-467 10. d.198.4 YdhG-like some similarity to YjbR-like (scop_sf 136320) Secretion chaperone-like alpha-beta(3)-alpha-beta(2)-alpha; 2 layers: alpha/beta 2oc6 d2oc6a1 A:0-12,13-32,49-59,60-66 2oc6 d2oc6b1 B:0-12,13-32,49-59,60-66 2i8d d2i8db1 B:3-12,13-32,49-59,60-66 2i8d d2i8da1 A:3-12,13-32,49-59,60-66 2oc6 d2oc6b1 B:0-12,13-32,34-40,41-48 2oc6 d2oc6a1 A:0-12,13-32,34-40,41-48 11. e.15.1 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment 2 domains: alpha+beta and all-beta 1k4s d1k4sa2 A:250-267,271-287,357-361,372-376 1ej9 d1ej9a2 A:250-264,271-287,357-362,370-376 1a36 d1a36a3 A:250-267,271-286,357-362,370-376 1seu d1seua3 A:250-267,271-286,358-362,370-375 1r49 d1r49a3 A:250-266,271-286,357-362,370-376 1k4t d1k4ta3 A:250-267,271-286,357-362,370-376 1rrj d1rrja3 A:250-267,271-286,358-362,370-375 1nh3 d1nh3a2 A:250-264,271-287,357-361,372-376 1lpq d1lpqa3 A:250-267,271-286,357-362,370-376 1sc7 d1sc7a3 A:250-267,271-286,358-362,370-375 1tl8 d1tl8a3 A:250-267,271-286,358-362,370-375 1a31 d1a31a2 A:250-267,271-286,357-362,370-376 1rr8 d1rr8c2 C:250-267,271-287,357-362,370-376 1a35 d1a35a2 A:250-267,271-286,357-362,370-376 1ois d1oisa_ A:178-192,199-218,289-295,302-308 12. d.220.1 Metal cation-transporting ATPase, ATP-binding domain N Metal cation-transporting ATPase, ATP-binding domain N unusual fold; core: beta-alpha(2)-beta(3)-alpha(2)-beta(2); 6-stranded antiparallel beta-sheet, order: 165432 1kju d1kjua3 A:517-525,538-556,559-568,591-600 1vfp d1vfpa3 A:518-525,538-555,559-568,591-601 1vfp d1vfpb3 B:518-525,538-555,559-568,591-601 1t5t d1t5ta3 A:518-525,538-555,559-568,591-601 1t5s d1t5sa3 A:518-525,538-555,559-568,591-601 1su4 d1su4a3 A:518-525,538-555,559-568,591-601 2zbd d2zbda3 A:518-525,538-555,559-568,591-601 1wpg d1wpgb3 B:518-525,538-555,559-568,591-601 1wpg d1wpgc3 C:518-525,538-555,559-568,591-601 2zbf d2zbfa3 A:517-525,538-555,559-568,591-601 2zbe d2zbea3 A:517-525,538-555,559-568,591-601 2zbe d2zbeb3 B:517-525,538-555,559-568,591-601 1wpg d1wpgd3 D:518-525,538-555,559-568,591-601 1wpg d1wpga3 A:518-525,538-555,559-568,591-601 3b9b d3b9ba3 A:517-525,538-555,559-568,591-601 3b9r d3b9ra3 A:518-525,538-555,559-568,591-601 2zbg d2zbga3 A:518-525,538-555,559-568,591-601 3b9r d3b9rb3 B:518-525,538-555,559-568,591-601 1iwo d1iwob3 B:518-525,538-555,559-568,591-601 1iwo d1iwoa3 A:518-525,538-555,559-568,591-601 1xp5 d1xp5a3 A:518-525,538-555,559-568,591-601 2a29 d2a29a1 A:398-409,413-427,428-436,437-448 2a00 d2a00a1 A:398-409,413-427,428-436,437-448 1svj d1svja_ A:397-409,413-427,428-436,437-447 2b8e d2b8eb2 B:503-510,514-528,529-537,538-548 1u7q d1u7qa_ A:397-409,413-427,428-436,437-447 2b8e d2b8ec2 C:502-510,514-528,529-537,538-548 1mo8 d1mo8a_ A:415-429,453-463,502-509,552-560 2b8e d2b8ea2 A:445-460,462-476,497-502,529-537 2b8e d2b8ec2 C:445-460,462-476,497-502,529-537 2b8e d2b8eb2 B:445-460,462-476,497-502,529-537 2b8e d2b8ea2 A:502-510,514-528,529-537,538-548 1q3i d1q3ia_ A:503-511,524-542,543-553,576-587 1svj d1svja_ A:329-344,346-362,390-397,428-436 1u7q d1u7qa_ A:329-344,346-361,390-397,428-436 1iwo d1iwoa3 A:407-422,439-453,510-517,559-568 1iwo d1iwob3 B:407-422,439-453,510-517,559-568 1kju d1kjua3 A:407-422,439-453,510-517,559-568 1su4 d1su4a3 A:407-422,439-453,509-517,559-568 3b9r d3b9ra3 A:407-422,439-453,509-517,559-568 2a29 d2a29a1 A:329-345,346-361,390-397,428-436 2a00 d2a00a1 A:329-345,346-361,390-397,428-436 13. d.144.1 Protein kinase-like (PK-like) shares functional and structural similarities with the ATP-grasp fold and PIPK ! Protein kinase-like (PK-like) consists of two alpha+beta domains, C-terminal domain is mostly alpha helical 2r7i d2r7ib1 B:120-128,129-151,161-167,168-174 2r7i d2r7id1 D:120-128,129-151,161-167,168-174 2r7i d2r7ia1 A:120-128,129-151,161-167,168-174 2r7i d2r7ic1 C:120-128,129-151,161-167,168-174 3c13 d3c13a1 A:120-128,129-151,161-167,168-174 3bqc d3bqca1 A:120-128,129-151,161-167,168-174 1ds5 d1ds5d_ D:120-128,129-151,161-167,168-174 1zog d1zoga1 A:120-128,129-151,161-167,168-174 1ds5 d1ds5a_ A:120-128,129-151,161-167,168-174 1ds5 d1ds5b_ B:120-128,129-151,161-167,168-174 1ds5 d1ds5c_ C:120-128,129-151,161-167,168-174 2oxd d2oxda1 A:120-128,129-151,161-167,168-174 2qc6 d2qc6a1 A:120-128,129-151,161-167,168-174 1m52 d1m52a_ A:322-330,336-358,368-373,375-380 1opj d1opja_ A:341-349,355-377,387-392,394-399 1j91 d1j91a_ A:120-128,129-151,161-167,168-174 1m52 d1m52b_ B:322-330,336-358,368-373,375-380 1m2r d1m2ra_ A:120-128,129-151,161-167,168-174 1daw d1dawa_ A:120-128,129-151,161-167,168-174 2hzn d2hzna1 A:322-330,336-358,368-373,375-380 1om1 d1om1a_ A:120-128,129-151,161-167,168-174 1zoh d1zoha1 A:120-128,129-151,161-167,168-174 1day d1daya_ A:120-128,129-151,161-167,168-174 2ofv d2ofvb1 B:323-330,337-359,369-374,376-381 1zoe d1zoea1 A:120-128,129-151,161-167,168-174 1iep d1iepa_ A:322-330,336-358,368-373,375-380 1m2p d1m2pa_ A:120-128,129-151,161-167,168-174 2oxx d2oxxa1 A:120-128,129-151,161-167,168-174 1fpu d1fpub_ B:322-330,336-358,368-373,375-380 1fpu d1fpua_ A:322-330,336-358,368-373,375-380 2oxy d2oxyb1 B:120-128,129-151,161-167,168-174 1iep d1iepb_ B:322-330,336-358,368-373,375-380 2fo0 d2fo0a3 A:341-349,355-377,387-392,394-399 1m2q d1m2qa_ A:120-128,129-151,161-167,168-174 1opl d1opla3 A:341-349,355-377,387-392,394-399 1opk d1opka3 A:341-349,355-377,387-392,394-399 1lp4 d1lp4a_ A:120-128,129-151,161-167,168-174 1opl d1oplb2 B:341-349,355-377,387-392,394-399 1jwh d1jwha_ A:120-128,129-151,161-167,168-174 1lpu d1lpua_ A:120-128,129-151,161-167,168-174 2oxy d2oxya1 A:120-128,129-151,161-167,168-174 1jam d1jama_ A:120-128,129-151,161-167,168-174 3bym d3byma1 A:323-330,337-359,369-374,376-381 1f0q d1f0qa_ A:120-128,129-151,161-167,168-174 2pvr d2pvra1 A:120-128,129-151,161-167,168-174 2of2 d2of2a1 A:323-330,337-359,369-374,376-381 2of4 d2of4a1 A:323-330,337-359,369-374,376-381 3byu d3byua1 A:323-330,337-359,369-374,376-381 3lck d3lcka_ A:323-330,337-359,369-374,376-381 3bys d3bysa1 A:323-330,337-359,369-374,376-381 1j91 d1j91b_ B:120-128,129-151,161-167,168-174 1na7 d1na7a_ A:120-128,129-151,161-167,168-174 2qoh d2qohb1 B:322-330,336-358,368-373,375-380 1opj d1opjb_ B:341-349,355-377,387-392,394-399 1ksw d1kswa3 A:345-352,359-381,391-396,398-403 2og8 d2og8b1 B:323-330,337-359,369-374,376-381 1lr4 d1lr4a_ A:120-128,129-151,161-167,168-174 1fmk d1fmka3 A:345-352,359-381,391-396,398-403 2qoh d2qoha1 A:322-330,336-358,368-373,375-380 2ofu d2ofua1 A:323-330,337-359,369-374,376-381 2zm1 d2zm1a1 A:323-330,337-359,369-374,376-381 1k2p d1k2pb_ B:481-488,494-516,526-531,533-538 2src d2srca3 A:345-352,359-381,391-396,398-403 2zm4 d2zm4a1 A:323-330,337-359,369-374,376-381 1yi6 d1yi6a1 A:345-352,359-381,391-396,398-403 1kob d1kobb_ B:134-141,147-169,179-184,189-193 2bdf d2bdfb1 B:345-352,359-381,391-396,398-403 1pjk d1pjka_ A:120-128,129-151,161-167,168-174 1k2p d1k2pa_ A:481-488,494-516,526-531,533-538 2bdf d2bdfa1 A:345-352,359-381,391-396,398-403 1k9a d1k9ac3 C:273-282,287-309,319-324,326-331 1k9a d1k9ad3 D:273-282,287-309,319-324,326-331 1ny3 d1ny3a_ A:145-152,159-181,191-196,201-206 1sm2 d1sm2b_ B:442-449,455-477,487-492,494-499 1jwh d1jwhb_ B:120-128,129-151,161-167,168-174 1k9a d1k9aa3 A:273-282,287-309,319-324,326-331 3d7u d3d7uc1 C:273-282,287-309,319-324,326-331 3d7u d3d7ua1 A:273-282,287-309,319-324,326-331 2h8h d2h8ha3 A:345-352,359-381,391-396,398-403 1t45 d1t45a_ A:677-686,765-787,797-802,804-809 1luf d1lufa_ A:661-670,697-719,729-734,736-741 1e90 d1e90a4 A:903-916,917-943,951-956,958-963 1fgk d1fgkb_ B:568-577,596-618,628-633,635-640 1e7u d1e7ua4 A:903-916,917-943,951-956,958-963 2ptk d2ptka3 A:345-353,359-381,391-396,398-403 1k9a d1k9af3 F:273-282,287-309,319-324,326-331 1mqb d1mqba_ A:699-708,712-734,744-749,751-756 1y57 d1y57a3 A:345-353,359-381,391-396,398-403 1k9a d1k9ae3 E:273-282,287-309,319-324,326-331 1w84 d1w84a1 A:112-120,123-145,155-160,162-167 3ds6 d3ds6b1 B:112-120,123-145,155-160,162-167 1k9a d1k9ab3 B:273-282,287-309,319-324,326-331 1agw d1agwb_ B:568-577,596-618,628-633,635-640 1ad5 d1ad5a3 A:345-353,359-381,391-396,398-403 1r1w d1r1wa_ A:1164-1172,1177-1199,1209-1214,1216-1221 1e8w d1e8wa4 A:903-916,917-943,951-956,958-963 2fgi d2fgia_ A:568-577,596-618,628-633,635-640 1w83 d1w83a1 A:112-120,123-145,155-160,162-167 1e7v d1e7va4 A:903-916,917-943,951-956,958-963 1ad5 d1ad5b3 B:345-353,359-381,391-396,398-403 3c1x d3c1xa1 A:1164-1172,1177-1199,1209-1214,1216-1221 1wbv d1wbva1 A:112-120,123-145,155-160,162-167 1mqb d1mqbb_ B:699-708,712-734,744-749,751-756 1qcf d1qcfa3 A:345-353,359-381,391-396,398-403 1pkg d1pkgb_ B:677-686,765-787,797-802,804-809 2fgi d2fgib_ B:568-577,596-618,628-633,635-640 1e8z d1e8za4 A:903-916,917-943,951-956,958-963 1wbo d1wboa1 A:112-120,123-145,155-160,162-167 1fgk d1fgka_ A:568-577,596-618,628-633,635-640 1fgi d1fgib_ B:568-577,596-618,628-633,635-640 2zb1 d2zb1a1 A:112-120,123-145,155-160,162-167 3d7z d3d7za1 A:112-120,123-145,155-160,162-167 1e8x d1e8xa4 A:903-916,917-943,951-956,958-963 1agw d1agwa_ A:568-577,596-618,628-633,635-640 1r0p d1r0pa_ A:1164-1172,1177-1199,1209-1214,1216-1221 1snu d1snua_ A:442-451,455-477,487-492,494-499 1wbn d1wbna1 A:112-120,123-145,155-160,162-167 3cth d3ctha1 A:1164-1172,1177-1199,1209-1214,1216-1221 3ds6 d3ds6d1 D:112-120,123-145,155-160,162-167 1fgi d1fgia_ A:568-577,596-618,628-633,635-640 1wbs d1wbsa1 A:112-120,123-145,155-160,162-167 1wbt d1wbta1 A:112-120,123-145,155-160,162-167 2zaz d2zaza1 A:112-120,123-145,155-160,162-167 1e8y d1e8ya4 A:903-916,917-943,951-956,958-963 3e92 d3e92a1 A:112-120,123-145,155-160,162-167 1sm2 d1sm2a_ A:442-451,455-477,487-492,494-499 1jpa d1jpaa_ A:714-723,727-749,759-764,766-771 2etm d2etma1 A:506-515,519-541,551-556,558-563 1jpa d1jpab_ B:714-723,727-749,759-764,766-771 3ctj d3ctja1 A:1164-1172,1177-1199,1209-1214,1216-1221 2bdj d2bdja1 A:345-353,359-381,391-396,398-403 2hck d2hckb3 B:345-353,359-381,391-396,398-403 2psq d2psqb1 B:571-580,599-621,631-636,638-643 1qpc d1qpca_ A:323-331,337-359,369-374,376-381 2hck d2hcka3 A:345-353,359-381,391-396,398-403 2zb0 d2zb0a1 A:112-120,123-145,155-160,162-167 1w82 d1w82a1 A:112-120,123-145,155-160,162-167 1qpd d1qpda_ A:323-331,337-359,369-374,376-381 2hk5 d2hk5a1 A:323-331,337-359,369-374,376-381 1qpe d1qpea_ A:323-331,337-359,369-374,376-381 2b1p d2b1pa1 A:152-160,162-184,194-199,201-206 3d83 d3d83a1 A:112-120,123-145,155-160,162-167 1qpj d1qpja_ A:323-331,337-359,369-374,376-381 1py5 d1py5a_ A:287-296,298-318,338-343,345-350 1yi6 d1yi6b1 B:345-353,359-381,391-396,398-403 1pmu d1pmua_ A:152-160,162-184,194-199,201-206 1xws d1xwsa_ A:128-137,140-162,172-178,179-185 2psq d2psqa1 A:571-580,599-621,631-636,638-643 2ofv d2ofva1 A:323-331,337-359,369-374,376-381 3ce3 d3ce3a1 A:1164-1172,1177-1199,1209-1214,1216-1221 1byg d1byga_ A:273-282,287-309,320-324,326-331 1ouk d1ouka_ A:112-120,123-145,155-160,162-167 3b2w d3b2wa1 A:323-331,337-359,369-374,376-381 1nxk d1nxkc_ C:145-153,159-181,191-196,201-206 1koa d1koaa2 A:6023-6030,6036-6058,6068-6072,6078-6082 3bgz d3bgza1 A:128-137,140-162,172-178,179-185 3bgq d3bgqa1 A:128-137,140-162,172-178,179-185 2obj d2obja1 A:128-137,140-162,172-178,179-185 3dcv d3dcva1 A:128-137,140-162,172-178,179-185 2pl0 d2pl0a1 A:323-331,337-359,369-374,376-381 1gjo d1gjoa_ A:571-580,599-621,631-636,638-643 3bgp d3bgpa1 A:128-137,140-162,172-178,179-185 3ds6 d3ds6c1 C:112-120,123-145,155-160,162-167 1he8 d1he8a4 A:903-916,917-943,951-956,958-963 1pmq d1pmqa_ A:152-160,162-184,194-199,201-206 1yhw d1yhwa1 A:351-359,362-384,394-399,401-406 1xqz d1xqza_ A:128-137,140-162,172-178,179-185 3c9w d3c9wb1 B:109-117,120-142,152-157,159-164 2f2c d2f2cb1 B:104-112,118-140,150-155,157-162 2og8 d2og8a1 A:323-331,337-359,369-374,376-381 1nxk d1nxkd_ D:145-153,159-181,191-196,201-206 1bi8 d1bi8c_ C:104-112,118-140,150-155,157-162 1bi8 d1bi8a_ A:104-112,118-140,150-155,157-162 1g3n d1g3ne_ E:104-112,118-140,150-155,157-162 2zdu d2zdua1 A:152-160,162-184,194-199,201-206 3c9w d3c9wa1 A:109-117,120-142,152-157,159-164 1gy3 d1gy3c_ C:86-95,100-122,132-137,139-144 1g3n d1g3na_ A:104-112,118-140,150-155,157-162 1ias d1iasa_ A:287-296,298-319,338-343,345-350 1ias d1iase_ E:287-296,298-319,338-343,345-350 1oec d1oeca_ A:571-580,599-621,631-636,638-643 1vjy d1vjya_ A:287-296,298-319,338-343,345-350 1ias d1iasd_ D:287-296,298-319,338-343,345-350 1jow d1jowb_ B:104-112,118-140,150-155,157-162 1ias d1iasc_ C:287-296,298-319,338-343,345-350 1wbw d1wbwa1 A:112-121,123-145,155-160,162-167 2euf d2eufb1 B:104-112,118-140,150-155,157-162 1ias d1iasb_ B:287-296,298-319,338-343,345-350 1pmn d1pmna_ A:152-160,162-184,194-199,201-206 1xr1 d1xr1a_ A:128-137,140-162,172-178,179-185 1pmv d1pmva_ A:152-160,162-184,194-199,201-206 2okr d2okra1 A:112-120,123-145,155-160,162-167 1bi7 d1bi7a_ A:104-112,118-140,150-155,157-162 2o2u d2o2ua1 A:152-160,162-184,194-199,201-206 1b6c d1b6cf_ F:287-296,298-319,338-343,345-350 1b6c d1b6cd_ D:287-296,298-319,338-343,345-350 1b6c d1b6cb_ B:287-296,298-319,338-343,345-350 1b6c d1b6ch_ H:287-296,298-319,338-343,345-350 2exc d2excx1 X:152-160,162-184,194-199,201-206 3bv2 d3bv2a1 A:112-120,123-145,155-160,162-167 2erk d2erka_ A:109-117,120-142,152-157,159-164 3e93 d3e93a1 A:112-121,123-145,155-160,162-167 2zdt d2zdta1 A:152-160,162-184,194-199,201-206 1cm8 d1cm8a_ A:115-124,126-148,158-163,165-170 1vr2 d1vr2a_ A:923-935,1001-1023,1033-1038,1040-1045 1cm8 d1cm8b_ B:1115-1124,1126-1148,1158-1163,1165-1170 1muo d1muoa_ A:217-226,229-251,261-266,268-273 4erk d4erka_ A:109-117,120-142,152-157,159-164 1blx d1blxa_ A:104-112,118-140,150-155,157-162 1m7q d1m7qa_ A:112-121,123-145,155-160,162-167 3erk d3erka_ A:109-117,120-142,152-157,159-164 1j3h d1j3ha_ A:127-136,139-161,171-176,178-183 2o0u d2o0ua1 A:152-160,162-184,194-199,201-206 1gol d1gola_ A:109-117,120-142,152-157,159-164 1okv d1okvc_ C:86-95,100-122,132-137,139-144 1di9 d1di9a_ A:112-121,123-145,155-160,162-167 2ok1 d2ok1a1 A:152-160,162-184,194-199,201-206 3cgo d3cgoa1 A:152-160,162-184,194-199,201-206 1yqj d1yqja1 A:112-121,123-145,155-160,162-167 1o6y d1o6ya_ A:99-108,111-133,143-148,150-155 2bcj d2bcja3 A:278-287,290-312,322-327,329-334 1jnk d1jnka_ A:152-160,162-184,194-199,201-206 2z7l d2z7la1 A:111-119,122-144,154-159,161-166 2p33 d2p33a1 A:152-160,162-184,194-199,201-206 1j3h d1j3hb_ B:127-136,139-161,171-176,178-183 2fum d2fumb1 B:99-108,111-133,143-148,150-155 2a4l d2a4la1 A:86-95,100-122,132-137,139-144 2fum d2fuma1 A:99-108,111-133,143-148,150-155 1rej d1reja_ A:127-136,139-161,171-176,178-183 1erk d1erka_ A:109-117,120-142,152-157,159-164 1mru d1mrua_ A:99-108,111-133,143-148,150-155 2r9s d2r9sb1 B:152-160,162-184,194-199,200-206 1phk d1phka_ A:110-119,122-144,154-159,161-166 1bkx d1bkxa_ A:127-136,139-161,171-176,178-183 1h1p d1h1pc_ C:86-95,100-122,132-137,139-144 1uwj d1uwja_ A:535-544,548-570,580-585,587-592 1ym7 d1ym7c3 C:278-287,290-312,322-327,329-334 1uwj d1uwjb_ B:535-544,548-570,580-585,587-592 2b54 d2b54a1 A:86-95,100-122,132-137,139-144 1ym7 d1ym7d3 D:278-287,290-312,322-327,329-334 1y8y d1y8ya1 A:86-95,100-122,132-137,139-144 2a0c d2a0cx1 X:86-95,100-122,132-137,139-144 1pme d1pmea_ A:111-119,122-144,154-159,161-166 1ym7 d1ym7a3 A:278-287,290-312,322-327,329-334 1ym7 d1ym7b3 B:278-287,290-312,322-327,329-334 2uue d2uuea1 A:86-95,100-122,132-137,139-144 1re8 d1re8a_ A:127-136,139-161,171-176,178-183 1h27 d1h27c_ C:86-95,100-122,132-137,139-144 2c5n d2c5na1 A:86-95,100-122,132-137,139-144 1pkd d1pkdc_ C:86-95,100-122,132-137,139-144 1uwh d1uwha_ A:535-544,548-570,580-585,587-592 2c68 d2c68a1 A:86-95,100-122,132-137,139-144 1wcc d1wcca1 A:86-95,100-122,132-137,139-144 1ke7 d1ke7a_ A:86-95,100-122,132-137,139-144 2c5v d2c5va1 A:86-95,100-122,132-137,139-144 3cgf d3cgfa1 A:152-160,162-184,194-199,201-206 2c6o d2c6oa1 A:86-95,100-122,132-137,139-144 1pxl d1pxla_ A:86-95,100-122,132-137,139-144 1jsu d1jsua_ A:86-95,100-122,132-137,139-144 1kob d1koba_ A:134-141,147-169,179-183,189-193 1uwh d1uwhb_ B:535-544,548-570,580-585,587-592 1rjb d1rjba_ A:698-710,784-806,816-821,823-828 1f5q d1f5qa_ A:86-95,100-122,132-137,139-144 1uu8 d1uu8a_ A:166-175,178-200,210-215,217-222 1r39 d1r39a_ A:112-121,123-145,155-160,162-167 2uue d2uuec1 C:86-95,100-122,132-137,139-144 1h26 d1h26a_ A:86-95,100-122,132-137,139-144 1rek d1reka_ A:127-136,139-161,171-176,178-183 2i40 d2i40c1 C:86-95,100-122,132-137,139-144 1gih d1giha_ A:86-95,100-122,132-137,139-144 1fvv d1fvvc_ C:86-95,100-122,132-137,139-144 1mru d1mrub_ B:99-108,111-133,143-148,150-155 1v0o d1v0ob_ B:85-93,98-120,130-135,137-142 2cch d2ccha1 A:86-95,100-122,132-137,139-144 1urc d1urca_ A:86-95,100-122,132-137,139-144 1ql6 d1ql6a_ A:110-119,122-144,154-159,161-166 2c5x d2c5xa1 A:86-95,100-122,132-137,139-144 1ouy d1ouya_ A:112-121,123-145,155-160,162-167 2c5o d2c5oc1 C:86-95,100-122,132-137,139-144 1uu9 d1uu9a_ A:166-175,178-200,210-215,217-222 1jst d1jstc_ C:86-95,100-122,132-137,139-144 2r9s d2r9sa1 A:152-160,162-184,194-199,200-206 1ywn d1ywna1 A:921-933,999-1021,1031-1036,1038-1043 2c5o d2c5oa1 A:86-95,100-122,132-137,139-144 2cpk d2cpke_ E:127-136,139-161,171-176,178-183 1okw d1okwc_ C:86-95,100-122,132-137,139-144 1l3r d1l3re_ E:127-136,139-161,171-176,178-183 1ol1 d1ol1a_ A:86-95,100-122,132-137,139-144 1atp d1atpe_ E:127-136,139-161,171-176,178-183 1ol2 d1ol2a_ A:86-95,100-122,132-137,139-144 2f7x d2f7xe1 E:127-136,139-161,171-176,178-183 2ijm d2ijmb1 B:506-515,519-541,551-555,559-563 1k3a d1k3aa_ A:1056-1065,1078-1100,1110-1115,1117-1122 1wfc d1wfca_ A:112-121,123-145,155-160,162-167 1mp8 d1mp8a_ A:506-515,519-541,551-555,559-563 1h1s d1h1sa_ A:86-95,100-122,132-137,139-144 2etm d2etmb1 B:506-515,519-541,551-555,559-563 1hcl d1hcla_ A:86-95,100-122,132-137,139-144 1ydr d1ydre_ E:127-136,139-161,171-176,178-183 1q99 d1q99b_ B:252-261,266-289,299-540,541-549 2c5v d2c5vc1 C:86-95,100-122,132-137,139-144 1oiy d1oiya_ A:86-95,100-122,132-137,139-144 1ol2 d1ol2c_ C:86-95,100-122,132-137,139-144 2c6t d2c6tc1 C:86-95,100-122,132-137,139-144 2c5n d2c5nc1 C:86-95,100-122,132-137,139-144 1ogu d1ogua_ A:86-95,100-122,132-137,139-144 2bal d2bala1 A:112-121,123-145,155-160,162-167 1szm d1szma_ A:127-136,139-161,171-176,178-183 2exm d2exma1 A:86-95,100-122,132-137,139-144 1nxk d1nxka_ A:145-153,159-181,191-196,201-206 2c1a d2c1aa1 A:127-136,139-161,171-176,178-183 1cmk d1cmke_ E:127-136,139-161,171-176,178-183 1irk d1irka_ A:1083-1092,1105-1127,1137-1142,1144-1149 1gy3 d1gy3a_ A:86-95,100-122,132-137,139-144 1jqh d1jqha_ A:1086-1095,1108-1130,1140-1145,1147-1152 1bx6 d1bx6a_ A:127-136,139-161,171-176,178-183 2ijm d2ijma1 A:506-515,519-541,551-555,559-563 2qcs d2qcsa1 A:127-136,139-161,171-176,178-183 1yds d1ydse_ E:127-136,139-161,171-176,178-183 1xkk d1xkka_ A:797-806,810-832,842-846,850-854 2p2i d2p2ib1 B:923-935,1001-1023,1033-1038,1040-1045 1m17 d1m17a_ A:773-782,786-808,818-822,826-830 1oiu d1oiua_ A:86-95,100-122,132-137,139-144 2iw9 d2iw9a1 A:86-95,100-122,132-137,139-144 1okw d1okwa_ A:86-95,100-122,132-137,139-144 1j7i d1j7ia_ A:97-105,107-125,195-200,201-207 1zyj d1zyja1 A:112-121,123-145,155-160,162-167 2b53 d2b53a1 A:86-95,100-122,132-137,139-144 1okz d1okza_ A:166-175,178-200,210-215,217-222 1cdk d1cdkb_ B:127-136,139-161,171-176,178-183 1how d1howa_ A:252-261,266-289,299-540,541-549 1hck d1hcka_ A:86-95,100-122,132-137,139-144 1p38 d1p38a_ A:112-120,123-145,155-160,162-167 1q8y d1q8yb_ B:252-261,266-289,299-540,541-549 3bu5 d3bu5a1 A:1083-1092,1105-1127,1137-1142,1144-1149 2okr d2okrd1 D:112-121,123-145,155-160,162-167 2onl d2onla1 A:112-121,123-145,155-160,162-167 1uu7 d1uu7a_ A:166-175,178-200,210-215,217-222 2onl d2onlb1 B:112-121,123-145,155-160,162-167 2pe1 d2pe1a1 A:166-175,178-200,210-215,217-222 3dt1 d3dt1a1 A:112-121,123-145,155-160,162-167 2pe0 d2pe0a1 A:166-175,178-200,210-215,217-222 3bu3 d3bu3a1 A:1083-1092,1105-1127,1137-1142,1144-1149 1h28 d1h28c_ C:86-95,100-122,132-137,139-144 1jkl d1jkla_ A:100-109,112-134,144-149,155-160 1h28 d1h28a_ A:86-95,100-122,132-137,139-144 2p2i d2p2ia1 A:923-935,1001-1023,1033-1038,1040-1045 2r7b d2r7ba1 A:166-175,178-200,210-215,217-222 1ctp d1ctpe_ E:127-136,139-161,171-176,178-183 2j5f d2j5fa1 A:797-806,810-832,842-846,850-854 1i44 d1i44a_ A:1083-1092,1105-1127,1137-1142,1144-1149 1z5m d1z5ma1 A:166-175,178-200,210-215,217-222 1fin d1finc_ C:86-95,100-122,132-137,139-144 1urc d1urcc_ C:86-95,100-122,132-137,139-144 1oi9 d1oi9a_ A:86-95,100-122,132-137,139-144 3bx5 d3bx5a1 A:112-120,123-145,155-160,162-167 2c5x d2c5xc1 C:86-95,100-122,132-137,139-144 3bht d3bhta1 A:86-95,100-122,132-137,139-144 2oj9 d2oj9a1 A:1056-1065,1078-1100,1110-1115,1117-1122 2zm3 d2zm3a1 A:1086-1095,1108-1130,1140-1145,1147-1152 2rg6 d2rg6a1 A:112-121,123-145,155-160,162-167 1fmo d1fmoe_ E:127-136,139-161,171-176,178-183 1uki d1ukia_ A:114-122,124-146,156-160,164-168 2fum d2fumc1 C:99-108,111-133,143-148,150-155 1q97 d1q97b_ B:252-261,266-289,299-540,541-549 1m14 d1m14a_ A:773-782,786-808,818-822,826-830 2phk d2phka_ A:110-119,122-144,154-159,161-166 1snu d1snub_ B:442-451,455-477,487-491,495-499 2c6t d2c6ta1 A:86-95,100-122,132-137,139-144 1t46 d1t46a_ A:677-689,765-787,797-802,804-809 1buh d1buha_ A:86-95,100-122,132-137,139-144 1zz2 d1zz2a1 A:112-121,123-145,155-160,162-167 1h4l d1h4la_ A:86-95,99-121,131-136,138-143 2gs6 d2gs6a1 A:773-782,786-808,818-822,826-830 1bmk d1bmka_ A:112-120,123-145,155-160,162-167 1p14 d1p14a_ A:1083-1092,1105-1127,1137-1142,1144-1149 1q8z d1q8zb_ B:252-261,266-289,299-540,541-549 1xbc d1xbca_ A:455-464,467-489,499-503,507-511 2gs2 d2gs2a1 A:773-782,786-808,818-822,826-830 1jqh d1jqhc_ C:1086-1095,1108-1130,1140-1145,1147-1152 1q8z d1q8za_ A:252-261,266-289,299-540,541-549 1ukh d1ukha_ A:114-122,124-146,156-160,164-168 2p55 d2p55a1 A:150-159,162-185,195-200,202-207 1q99 d1q99a_ A:252-261,266-289,299-540,541-549 1h4l d1h4lb_ B:86-95,99-121,131-136,138-143 2ity d2itya1 A:797-806,810-832,842-846,850-854 3bu6 d3bu6a1 A:1083-1092,1105-1127,1137-1142,1144-1149 1ig1 d1ig1a_ A:100-109,112-134,144-149,155-160 1oky d1okya_ A:166-175,178-200,210-215,217-222 1xbb d1xbba_ A:455-464,467-489,499-503,507-511 3bz3 d3bz3a1 A:506-515,519-541,551-555,559-563 1h1w d1h1wa_ A:166-175,178-200,210-215,217-222 1kwp d1kwpa_ A:145-153,159-181,191-196,201-206 2b4s d2b4sd1 D:1083-1092,1105-1127,1137-1142,1144-1149 2pe2 d2pe2a1 A:166-175,178-200,210-215,217-222 1uu3 d1uu3a_ A:166-175,178-200,210-215,217-222 1jkk d1jkka_ A:100-109,112-134,144-149,155-160 2b4s d2b4sb1 B:1083-1092,1105-1127,1137-1142,1144-1149 2oza d2ozab1 B:112-121,123-145,155-160,162-167 1ol1 d1ol1c_ C:86-95,100-122,132-137,139-144 1szm d1szmb_ B:127-136,139-161,171-176,178-183 1h24 d1h24a_ A:86-95,100-122,132-137,139-144 2itw d2itwa1 A:797-806,810-832,842-846,850-854 2oza d2ozaa1 A:145-153,159-181,191-196,201-206 1snx d1snxb_ B:442-451,455-477,487-491,495-499 2fum d2fumd1 D:99-108,111-133,143-148,150-155 1xba d1xbaa_ A:455-464,467-489,499-503,507-511 2iw6 d2iw6a1 A:86-95,100-122,132-137,139-144 2onl d2onlc1 C:145-153,159-181,191-196,201-206 1q8y d1q8ya_ A:252-261,266-289,299-540,541-549 2j6m d2j6ma1 A:797-806,810-832,842-846,850-854 1s9j d1s9ja_ A:150-159,162-185,195-200,202-207 1ung d1unga_ A:86-95,99-121,131-136,138-143 1unh d1unhb_ B:86-95,99-121,131-136,138-143 1bl6 d1bl6a_ A:112-120,123-145,155-160,162-167 1ung d1ungb_ B:86-95,99-121,131-136,138-143 1fvr d1fvra_ A:909-919,937-959,969-974,976-981 1fvr d1fvrb_ B:909-919,937-959,969-974,976-981 2zm3 d2zm3d1 D:1086-1095,1108-1130,1140-1145,1147-1152 2itx d2itxa1 A:797-806,810-832,842-846,850-854 2z8c d2z8ca1 A:1083-1092,1105-1127,1137-1142,1144-1149 1unl d1unla_ A:86-95,99-121,131-136,138-143 1q97 d1q97a_ A:252-261,266-289,299-540,541-549 1uvr d1uvra_ A:166-175,178-200,210-215,217-222 1h25 d1h25a_ A:86-95,100-122,132-137,139-144 1pkg d1pkga_ A:677-689,765-787,797-802,804-809 1unl d1unlb_ B:86-95,99-121,131-136,138-143 1vzo d1vzoa_ A:138-147,150-172,182-187,189-194 2bhh d2bhha1 A:86-98,100-122,132-137,139-144 1f3m d1f3md_ D:351-360,362-384,394-399,401-406 1unh d1unha_ A:86-95,99-121,131-136,138-143 1e1v d1e1va_ A:86-98,100-122,132-137,139-144 1jst d1jsta_ A:86-95,100-122,132-137,139-144 2clx d2clxa1 A:86-98,100-122,132-137,139-144 2onl d2onld1 D:145-153,159-181,191-196,201-206 3ds6 d3ds6a1 A:112-121,123-145,155-160,162-167 1pye d1pyea_ A:86-98,100-122,132-137,139-144 1f3m d1f3mc_ C:351-360,362-384,394-399,401-406 1a9u d1a9ua_ A:112-121,123-145,155-160,162-167 1e1x d1e1xa_ A:86-98,100-122,132-137,139-144 1h1q d1h1qa_ A:86-98,100-122,132-137,139-144 1s9i d1s9ib_ B:154-163,166-189,199-204,206-211 1u5r d1u5ra_ A:111-120,124-146,156-161,163-168 1r78 d1r78a_ A:86-98,100-122,132-137,139-144 1pf8 d1pf8a_ A:86-98,100-122,132-137,139-144 2gcd d2gcdb1 B:111-120,124-146,156-161,163-168 1bl7 d1bl7a_ A:112-120,123-145,155-160,162-167 2gcd d2gcda1 A:111-120,124-146,156-161,163-168 2jfm d2jfma1 A:115-124,128-150,160-165,167-172 1u5q d1u5qa_ A:111-120,124-146,156-161,163-168 2c5y d2c5ya1 A:86-98,100-122,132-137,139-144 1pxk d1pxka_ A:86-98,100-122,132-137,139-144 2c6k d2c6ka1 A:86-98,100-122,132-137,139-144 1snx d1snxa_ A:442-451,455-477,487-491,495-499 1y91 d1y91a1 A:86-98,100-122,132-137,139-144 1a06 d1a06a_ A:102-111,114-136,146-151,156-161 1pw2 d1pw2a_ A:86-98,100-122,132-137,139-144 2b52 d2b52a1 A:86-98,100-122,132-137,139-144 2c6i d2c6ia1 A:86-98,100-122,132-137,139-144 2cjm d2cjmc1 C:86-98,100-122,132-137,139-144 2jfl d2jfla1 A:115-124,128-150,160-165,167-172 1nxk d1nxkb_ B:145-154,159-181,191-196,201-206 2c6m d2c6ma1 A:86-98,100-122,132-137,139-144 2uv2 d2uv2a1 A:115-124,128-150,160-165,167-172 2fys d2fysb1 B:109-117,120-142,152-156,160-164 2bpm d2bpma1 A:86-98,100-122,132-137,139-144 1jvp d1jvpp_ P:86-98,100-122,132-137,139-144 1ykr d1ykra1 A:86-98,100-122,132-137,139-144 1b38 d1b38a_ A:86-98,100-122,132-137,139-144 1pxi d1pxia_ A:86-98,100-122,132-137,139-144 2b55 d2b55a1 A:86-98,100-122,132-137,139-144 2gtn d2gtna1 A:112-120,123-145,155-160,162-167 2c69 d2c69a1 A:86-98,100-122,132-137,139-144 1xo2 d1xo2b1 B:104-113,118-140,150-155,157-162 1gz8 d1gz8a_ A:86-98,100-122,132-137,139-144 1pxm d1pxma_ A:86-98,100-122,132-137,139-144 1h00 d1h00a_ A:86-98,100-122,132-137,139-144 2btr d2btra1 A:86-98,100-122,132-137,139-144 1u5q d1u5qb_ B:111-120,124-146,156-161,163-168 1oit d1oita_ A:86-98,100-122,132-137,139-144 1h0v d1h0va_ A:86-98,100-122,132-137,139-144 2bpm d2bpmc1 C:86-98,100-122,132-137,139-144 1w0x d1w0xc1 C:86-98,100-122,132-137,139-144 1kwp d1kwpb_ B:145-154,159-181,191-196,201-206 2fvd d2fvda1 A:86-98,100-122,132-137,139-144 1vyw d1vywa_ A:86-98,100-122,132-137,139-144 2c6l d2c6la1 A:86-98,100-122,132-137,139-144 1p2a d1p2aa_ A:86-98,100-122,132-137,139-144 1h1s d1h1sc_ C:86-98,100-122,132-137,139-144 1jsv d1jsva_ A:86-98,100-122,132-137,139-144 1h27 d1h27a_ A:86-95,100-122,132-137,139-144 1g5s d1g5sa_ A:86-98,100-122,132-137,139-144 1dm2 d1dm2a_ A:86-98,100-122,132-137,139-144 2ds1 d2ds1a1 A:86-98,100-122,132-137,139-144 1h08 d1h08a_ A:86-98,100-122,132-137,139-144 1ckp d1ckpa_ A:86-98,100-122,132-137,139-144 1h1q d1h1qc_ C:86-98,100-122,132-137,139-144 2bhe d2bhea1 A:86-98,100-122,132-137,139-144 2c4g d2c4gc1 C:86-98,100-122,132-137,139-144 1di8 d1di8a_ A:86-98,100-122,132-137,139-144 1pxp d1pxpa_ A:86-98,100-122,132-137,139-144 1w98 d1w98a1 A:86-98,100-122,132-137,139-144 1s9i d1s9ia_ A:154-163,166-189,199-204,206-211 2cch d2cchc1 C:86-98,100-122,132-137,139-144 1ke6 d1ke6a_ A:86-98,100-122,132-137,139-144 2c4g d2c4ga1 A:86-98,100-122,132-137,139-144 1w8c d1w8ca1 A:86-98,100-122,132-137,139-144 1pxo d1pxoa_ A:86-98,100-122,132-137,139-144 1ke5 d1ke5a_ A:86-98,100-122,132-137,139-144 1fvt d1fvta_ A:86-98,100-122,132-137,139-144 1u5r d1u5rb_ B:111-120,124-146,156-161,163-168 1v1k d1v1ka_ A:86-98,100-122,132-137,139-144 1pxj d1pxja_ A:86-98,100-122,132-137,139-144 1aq1 d1aq1a_ A:86-98,100-122,132-137,139-144 1p5e d1p5ec_ C:86-98,100-122,132-137,139-144 1vyw d1vywc_ C:86-98,100-122,132-137,139-144 1ke8 d1ke8a_ A:86-98,100-122,132-137,139-144 1oiq d1oiqa_ A:86-98,100-122,132-137,139-144 1urw d1urwa_ A:86-98,100-122,132-137,139-144 1h07 d1h07a_ A:86-98,100-122,132-137,139-144 1e9h d1e9hc_ C:86-98,100-122,132-137,139-144 2fys d2fysa1 A:109-117,120-142,152-156,160-164 1ke9 d1ke9a_ A:86-98,100-122,132-137,139-144 1b39 d1b39a_ A:86-98,100-122,132-137,139-144 1h0w d1h0wa_ A:86-98,100-122,132-137,139-144 1vyz d1vyza_ A:86-98,100-122,132-137,139-144 1gii d1giia_ A:86-98,100-122,132-137,139-144 1ogu d1oguc_ C:86-98,100-122,132-137,139-144 1oi9 d1oi9c_ C:86-98,100-122,132-137,139-144 2duv d2duva1 A:86-98,100-122,132-137,139-144 1e9h d1e9ha_ A:86-98,100-122,132-137,139-144 1h01 d1h01a_ A:86-98,100-122,132-137,139-144 1u4d d1u4da_ A:212-221,225-247,257-261,265-269 1u54 d1u54a_ A:212-221,225-247,257-261,265-269 1gij d1gija_ A:86-98,100-122,132-137,139-144 2cci d2ccia1 A:86-98,100-122,132-137,139-144 1lez d1leza_ A:112-121,123-145,155-159,163-167 1oir d1oira_ A:86-98,100-122,132-137,139-144 1lew d1lewa_ A:112-121,123-145,155-159,163-167 1h26 d1h26c_ C:86-98,100-122,132-137,139-144 1jks d1jksa_ A:100-109,112-134,144-148,156-160 1u46 d1u46a_ A:212-221,225-247,257-261,265-269 2bts d2btsa1 A:86-98,100-122,132-137,139-144 1h25 d1h25c_ C:86-98,100-122,132-137,139-144 1u54 d1u54b_ B:212-221,225-247,257-261,265-269 2g9x d2g9xc1 C:86-98,100-122,132-137,139-144 1eh4 d1eh4a_ A:91-100,104-126,136-140,149-153 1p5e d1p5ea_ A:86-95,100-122,132-136,140-144 2g9x d2g9xa1 A:86-95,100-122,132-136,140-144 3blq d3blqa1 A:109-117,122-144,154-159,161-166 3blh d3blha1 A:109-117,122-144,154-159,161-166 1pkd d1pkda_ A:86-98,100-122,132-137,139-144 1u4d d1u4db_ B:212-220,225-247,257-261,265-269 1fin d1fina_ A:86-95,100-122,132-136,140-144 1pxn d1pxna_ A:86-98,100-122,132-137,139-144 1u46 d1u46b_ B:212-220,225-247,257-261,265-269 2cci d2ccic1 C:86-98,100-122,132-137,139-144 1fq1 d1fq1b_ B:86-98,100-122,132-136,140-144 1ob3 d1ob3a_ A:85-94,98-120,130-135,137-142 1v0o d1v0oa_ A:85-94,98-120,130-135,137-142 1h24 d1h24c_ C:86-95,100-122,132-136,140-144 2iw8 d2iw8a1 A:86-95,100-122,132-136,140-144 1oiu d1oiuc_ C:86-95,100-122,132-136,140-144 3blr d3blra1 A:109-117,122-144,154-159,161-166 1v0p d1v0pa_ A:85-94,98-120,130-135,137-142 1h1p d1h1pa_ A:86-95,100-122,132-136,140-144 1v0p d1v0pb_ B:85-94,98-120,130-135,137-142 1m7n d1m7na_ A:1083-1093,1105-1127,1137-1142,1144-1149 1v0b d1v0bb_ B:85-94,98-120,130-135,137-142 1m7n d1m7nb_ B:1083-1093,1105-1127,1137-1142,1144-1149 1ob3 d1ob3b_ B:85-94,98-120,130-135,137-142 1fvv d1fvva_ A:86-98,100-122,132-136,140-144 1omw d1omwa3 A:278-287,290-312,322-326,330-334 1gag d1gaga_ A:1083-1093,1105-1127,1137-1142,1144-1149 1ir3 d1ir3a_ A:1083-1093,1105-1127,1137-1142,1144-1149 1oiy d1oiyc_ C:86-98,100-122,132-136,140-144 2bkz d2bkzc1 C:86-98,100-122,132-136,140-144 2bkz d2bkza1 A:86-98,100-122,132-136,140-144 1okv d1okva_ A:86-95,100-122,132-136,140-144 1jqh d1jqhb_ B:1086-1096,1108-1130,1140-1145,1147-1152 1qmz d1qmzc_ C:86-98,100-122,132-136,140-144 2zm3 d2zm3c1 C:1086-1096,1108-1130,1140-1145,1147-1152 1qmz d1qmza_ A:86-98,100-122,132-136,140-144 2i40 d2i40a1 A:86-98,100-122,132-136,140-144 2cjm d2cjma1 A:86-98,100-122,132-137,139-144 1h1r d1h1ra_ A:86-98,100-122,132-136,140-144 1cki d1ckib_ B:91-100,104-126,136-140,149-153 1ckj d1ckjb_ B:91-100,104-126,136-140,149-153 2zm3 d2zm3b1 B:1086-1096,1108-1130,1140-1145,1147-1152 1f5q d1f5qc_ C:86-95,100-122,132-136,140-144 1cki d1ckia_ A:91-100,104-126,136-140,149-153 2iw9 d2iw9c1 C:86-98,100-122,132-136,140-144 2iw6 d2iw6c1 C:86-98,100-122,132-136,140-144 1h1r d1h1rc_ C:86-98,100-122,132-136,140-144 1ckj d1ckja_ A:91-100,104-126,136-140,149-153 1rqq d1rqqa_ A:1083-1093,1105-1127,1137-1142,1144-1149 1rqq d1rqqb_ B:1083-1093,1105-1127,1137-1142,1144-1149 1v0b d1v0ba_ A:85-94,98-120,130-135,137-142 2iw8 d2iw8c1 C:86-98,100-122,132-136,140-144 2auh d2auha1 A:1083-1093,1105-1127,1137-1142,1144-1149 2csn d2csna_ A:91-100,104-126,136-140,149-153 1j1c d1j1cb_ B:638-650,654-676,686-692,693-699 1r0e d1r0ea_ A:138-150,154-176,186-192,193-199 1j1b d1j1bb_ B:638-650,654-676,686-692,693-699 1j1b d1j1ba_ A:138-150,154-176,186-192,193-199 1uv5 d1uv5a_ A:138-150,154-176,186-192,193-199 1j1c d1j1ca_ A:138-150,154-176,186-192,193-199 1gng d1gnga_ A:138-150,154-176,186-192,193-199 1csn d1csna_ A:91-100,104-126,136-140,149-153 1pyx d1pyxb_ B:138-150,154-176,186-192,193-199 1r0e d1r0eb_ B:138-150,154-176,186-192,193-199 1q4l d1q4lb_ B:138-150,154-176,186-192,193-199 1gng d1gngb_ B:138-150,154-176,186-192,193-199 1q41 d1q41b_ B:138-150,154-176,186-192,193-199 1q5k d1q5ka_ A:138-150,154-176,186-192,193-199 1pyx d1pyxa_ A:138-150,154-176,186-192,193-199 1q3d d1q3db_ B:138-150,154-176,186-192,193-199 1q5k d1q5kb_ B:138-150,154-176,186-192,193-199 1i09 d1i09b_ B:138-150,154-176,186-192,193-199 1q4l d1q4la_ A:138-150,154-176,186-192,193-199 1h8f d1h8fb_ B:138-150,154-176,186-192,193-199 1o9u d1o9ua_ A:138-150,154-176,186-192,193-199 1q3w d1q3wb_ B:138-150,154-176,186-192,193-199 1i09 d1i09a_ A:138-150,154-176,186-192,193-199 1h8f d1h8fa_ A:138-150,154-176,186-192,193-199 1q3w d1q3wa_ A:138-150,154-176,186-192,193-199 1q41 d1q41a_ A:138-150,154-176,186-192,193-199 2ow3 d2ow3a1 A:138-150,154-176,186-192,193-199 1q3d d1q3da_ A:138-150,154-176,186-192,193-199 1tki d1tkia_ A:104-112,117-139,149-153,159-163 1tki d1tkib_ B:104-112,117-139,149-153,159-163 2o5k d2o5ka1 A:138-150,154-176,186-192,193-199 2ow3 d2ow3b1 B:138-150,154-176,186-191,194-199 2jav d2java1 A:93-105,109-131,146-151,153-158 1p4o d1p4ob_ B:1056-1072,1078-1100,1110-1115,1117-1122 1p4o d1p4oa_ A:1056-1072,1078-1100,1110-1115,1117-1122 14. d.313.1 Prenyltransferase-like the barrel channel harbours the substrate-binding site ! Antiparallel beta/alpha barrel (PT-barrel) tandem repeat of five alpha(2)-beta(2) motifs; antiparallel beta-sheet barrel, closed; n=10, S=10; order 123456789A; there is a channel along the barrel axis 1zdw d1zdwa1 A:73-82,89-103,104-113,116-124 1zcw d1zcwa1 A:73-82,89-103,104-113,116-124 1zb6 d1zb6a1 A:73-82,89-103,104-113,116-124 1zdy d1zdya1 A:73-82,89-103,104-113,115-124 1zdw d1zdwa1 A:73-82,89-103,159-168,169-177 1zb6 d1zb6a1 A:73-82,89-103,159-168,169-177 1zcw d1zcwa1 A:73-82,89-103,159-168,169-177 1zdw d1zdwa1 A:3-22,26-38,47-54,61-68 1zdy d1zdya1 A:73-82,89-103,159-168,169-177 1zcw d1zcwa1 A:3-22,26-38,47-55,61-68 1zdy d1zdya1 A:3-22,26-38,47-55,61-68 1zb6 d1zb6a1 A:3-22,26-38,47-55,61-68 1zdw d1zdwa1 A:185-197,202-212,213-220,226-236 1zdy d1zdya1 A:185-197,202-212,212-220,226-236 1zb6 d1zb6a1 A:185-197,202-212,213-220,226-236 1zcw d1zcwa1 A:185-197,202-212,213-220,226-236 1zdy d1zdya1 A:3-22,26-38,104-113,115-124 1zcw d1zcwa1 A:3-22,26-38,104-113,116-124 1zdw d1zdwa1 A:3-22,26-38,104-113,116-124 1zb6 d1zb6a1 A:3-22,26-38,104-113,116-124 19. a.129.1 GroEL equatorial domain-like duplication: two 4-helical subdomains are related by a pseudo dyad passing through the ATP-binding site ! GroEL equatorial domain-like multihelical; 8 helices arranged in 2 parallel layers 1pcq d1pcqa1 A:448-459,461-473,476-481,482-487 1pcq d1pcqd1 D:448-459,461-473,476-481,482-487 1pcq d1pcqg1 G:448-459,461-473,476-481,482-487 1pcq d1pcqc1 C:448-459,461-473,476-481,482-487 1pcq d1pcqe1 E:448-459,461-473,476-481,482-487 1pcq d1pcqf1 F:448-459,461-473,476-481,482-487 1pcq d1pcqb1 B:448-459,461-473,476-481,482-487 1pf9 d1pf9f1 F:448-459,461-473,476-481,482-487 1pf9 d1pf9c1 C:448-459,461-473,476-481,482-487 1pf9 d1pf9e1 E:448-459,461-473,476-481,482-487 1pcq d1pcql1 L:448-459,461-473,476-481,482-487 1pf9 d1pf9a1 A:448-459,461-473,476-481,482-487 1pcq d1pcqh1 H:448-459,461-473,476-481,482-487 1pcq d1pcqm1 M:448-459,461-473,476-481,482-487 1pcq d1pcqk1 K:448-459,461-473,476-481,482-487 1pcq d1pcqi1 I:448-459,461-473,476-481,482-487 1pcq d1pcqn1 N:448-459,461-473,476-481,482-487 1pcq d1pcqj1 J:448-459,461-473,476-481,482-487 1kp8 d1kp8h1 H:448-459,461-473,476-481,482-487 1kp8 d1kp8j1 J:448-459,461-473,476-481,482-487 1pf9 d1pf9h1 H:448-459,461-473,476-481,482-487 1pf9 d1pf9i1 I:448-459,461-473,476-481,482-487 1pf9 d1pf9l1 L:448-459,461-473,476-481,482-487 1kp8 d1kp8a1 A:448-459,461-473,476-481,482-487 1pf9 d1pf9m1 M:448-459,461-473,476-481,482-487 1kp8 d1kp8f1 F:448-459,461-473,476-481,482-487 1kp8 d1kp8g1 G:448-459,461-473,476-481,482-487 1pf9 d1pf9n1 N:448-459,461-473,476-481,482-487 1kp8 d1kp8k1 K:448-459,461-473,476-481,482-487 1kp8 d1kp8i1 I:448-459,461-473,476-481,482-487 1pf9 d1pf9k1 K:448-459,461-473,476-481,482-487 1kp8 d1kp8m1 M:448-459,461-473,476-481,482-487 1pf9 d1pf9j1 J:448-459,461-473,476-481,482-487 1kp8 d1kp8n1 N:448-459,461-473,476-481,482-487 1kp8 d1kp8c1 C:448-459,461-473,476-481,482-487 1kp8 d1kp8l1 L:448-459,461-473,476-481,482-487 1kp8 d1kp8b1 B:448-459,461-473,476-481,482-487 1kp8 d1kp8e1 E:448-459,461-473,476-481,482-487 1oel d1oelc5 C:448-459,461-473,476-481,482-487 1j4z d1j4zk1 K:448-459,461-473,476-481,482-487 1kp8 d1kp8d1 D:448-459,461-473,476-481,482-487 1kpo d1kpov1 V:448-459,461-473,476-481,482-487 1j4z d1j4zh1 H:448-459,461-473,476-481,482-487 1kpo d1kpoy1 Y:448-459,461-473,476-481,482-487 1kpo d1kpop1 P:448-459,461-473,476-481,482-487 1kpo d1kpoo1 O:448-459,461-473,476-481,482-487 1j4z d1j4zf1 F:448-459,461-473,476-481,482-487 1j4z d1j4zl1 L:448-459,461-473,476-481,482-487 1j4z d1j4zg1 G:448-459,461-473,476-481,482-487 1kpo d1kpoz1 Z:448-459,461-473,476-481,482-487 1kpo d1kpo11 1:448-459,461-473,476-481,482-487 1j4z d1j4zc1 C:448-459,461-473,476-481,482-487 1j4z d1j4zn1 N:448-459,461-473,476-481,482-487 1j4z d1j4zj1 J:448-459,461-473,476-481,482-487 1kpo d1kpow1 W:448-459,461-473,476-481,482-487 1kpo d1kpox1 X:448-459,461-473,476-481,482-487 1kpo d1kpo21 2:448-459,461-473,476-481,482-487 1j4z d1j4zb1 B:448-459,461-473,476-481,482-487 1kpo d1kpoq1 Q:448-459,461-473,476-481,482-487 1j4z d1j4zi1 I:448-459,461-473,476-481,482-487 1mnf d1mnfa1 A:448-459,461-473,476-481,482-487 1kpo d1kpou1 U:448-459,461-473,476-481,482-487 1j4z d1j4zm1 M:448-459,461-473,476-481,482-487 1mnf d1mnfl1 L:448-459,461-473,476-481,482-487 1kpo d1kpos1 S:448-459,461-473,476-481,482-487 1kpo d1kpot1 T:448-459,461-473,476-481,482-487 1mnf d1mnfd1 D:448-459,461-473,476-481,482-487 1j4z d1j4ze1 E:448-459,461-473,476-481,482-487 1aon d1aonf1 F:448-459,461-473,476-481,482-487 1mnf d1mnfc1 C:448-459,461-473,476-481,482-487 1mnf d1mnfh1 H:448-459,461-473,476-481,482-487 1mnf d1mnfm1 M:448-459,461-473,476-481,482-487 1mnf d1mnfi1 I:448-459,461-473,476-481,482-487 1mnf d1mnfk1 K:448-459,461-473,476-481,482-487 1kpo d1kpor1 R:448-459,461-473,476-481,482-487 1mnf d1mnfe1 E:448-459,461-473,476-481,482-487 1j4z d1j4zd1 D:448-459,461-473,476-481,482-487 1mnf d1mnfj1 J:448-459,461-473,476-481,482-487 1j4z d1j4za1 A:448-459,461-473,476-481,482-487 1mnf d1mnff1 F:448-459,461-473,476-481,482-487 1mnf d1mnfg1 G:448-459,461-473,476-481,482-487 1mnf d1mnfb1 B:448-459,461-473,476-481,482-487 1mnf d1mnfn1 N:448-459,461-473,476-481,482-487 1aon d1aonh1 H:448-459,461-473,476-481,482-487 1aon d1aonk1 K:448-459,461-473,476-481,482-487 1aon d1aonm1 M:448-459,461-473,476-481,482-487 1aon d1aonl1 L:448-459,461-473,476-481,482-487 1aon d1aoni1 I:448-459,461-473,476-481,482-487 1aon d1aonn1 N:448-459,461-473,476-481,482-487 1aon d1aonj1 J:448-459,461-473,476-481,482-487 1a6d d1a6db1 B:428-454,456-471,475-480,481-486 1pf9 d1pf9g1 G:448-459,461-473,476-480,483-487 1pf9 d1pf9b1 B:448-459,461-473,476-480,483-487 1pf9 d1pf9d1 D:448-459,461-473,476-480,483-487 1a6e d1a6eb1 B:428-454,456-471,475-480,481-486 1aon d1aond1 D:448-459,461-473,476-480,483-487 1aon d1aonc1 C:448-459,461-473,476-480,483-487 1aon d1aonb1 B:448-459,461-473,476-480,483-487 1aon d1aong1 G:448-459,461-473,476-480,483-487 1aon d1aone1 E:448-459,461-473,476-480,483-487 1aon d1aona1 A:448-459,461-473,476-480,483-487 1grl d1grla1 A:433-459,461-473,476-481,482-487 1grl d1grlf1 F:433-459,461-473,476-481,482-487 1grl d1grlg1 G:433-459,461-473,476-481,482-487 1grl d1grle1 E:433-459,461-473,476-481,482-487 1grl d1grld1 D:433-459,461-473,476-481,482-487 1grl d1grlc1 C:433-459,461-473,476-481,482-487 1grl d1grlb1 B:433-459,461-473,476-481,482-487 1oel d1oele1 E:433-459,461-473,476-481,482-487 1oel d1oelf1 F:433-459,461-473,476-481,482-487 1oel d1oela1 A:433-459,461-473,476-481,482-487 1oel d1oelg1 G:433-459,461-473,476-481,482-487 1iok d1ioka1 A:433-459,461-472,477-482,483-488 1iok d1iokb1 B:433-459,461-472,477-482,483-488 1iok d1iokf1 F:433-459,461-472,477-482,483-488 1iok d1ioke1 E:433-459,461-472,477-482,483-488 1iok d1iokc1 C:433-459,461-472,477-482,483-488 1iok d1iokd1 D:433-459,461-472,477-482,483-488 1iok d1iokg1 G:433-459,461-472,477-482,483-488 1we3 d1we3m1 M:433-459,461-473,478-482,485-489 1we3 d1we3i1 I:433-459,461-473,478-482,485-489 1we3 d1we3l1 L:433-459,461-473,478-482,485-489 1wf4 d1wf4k1 K:433-459,461-473,478-482,485-489 1wf4 d1wf4l1 L:433-459,461-473,478-482,485-489 1we3 d1we3k1 K:433-459,461-473,478-482,485-489 1we3 d1we3j1 J:433-459,461-473,478-482,485-489 1wf4 d1wf4i1 I:433-459,461-473,478-482,485-489 1wf4 d1wf4j1 J:433-459,461-473,478-482,485-489 1wf4 d1wf4m1 M:433-459,461-473,478-482,485-489 1wf4 d1wf4h1 H:433-459,461-473,478-482,485-489 1wf4 d1wf4n1 N:433-459,461-473,478-482,485-489 1we3 d1we3h1 H:433-459,461-473,478-482,485-489 1q3s d1q3sg1 G:430-456,458-474,477-481,484-488 1q3s d1q3sc1 C:430-456,458-474,477-481,484-488 1q3s d1q3sh1 H:430-456,458-474,477-481,484-488 1a6e d1a6ea1 A:427-453,455-470,473-478,481-486 1oel d1oelb1 B:433-459,461-473,476-480,483-487 1oel d1oeld1 D:433-459,461-473,476-480,483-487 1q3s d1q3sf1 F:430-456,458-474,477-481,484-488 1we3 d1we3b1 B:433-459,461-473,478-483,484-489 1we3 d1we3f1 F:433-459,461-473,478-483,484-489 1we3 d1we3c1 C:433-459,461-473,478-483,484-489 1wf4 d1wf4e1 E:433-459,461-473,478-483,484-489 1we3 d1we3g1 G:433-459,461-473,478-483,484-489 1wf4 d1wf4b1 B:433-459,461-473,478-483,484-489 1wf4 d1wf4d1 D:433-459,461-473,478-483,484-489 1we3 d1we3e1 E:433-459,461-473,478-483,484-489 1wf4 d1wf4c1 C:433-459,461-473,478-483,484-489 1we3 d1we3d1 D:433-459,461-473,478-483,484-489 1wf4 d1wf4g1 G:433-459,461-473,478-483,484-489 1wf4 d1wf4f1 F:433-459,461-473,478-483,484-489 1wf4 d1wf4a1 A:433-459,461-473,478-483,484-489 1we3 d1we3a1 A:433-459,461-473,478-483,484-489 1q3r d1q3rd1 D:431-456,458-474,477-481,484-488 1q2v d1q2va1 A:430-456,458-474,477-482,483-488 1sjp d1sjpa1 A:429-455,457-468,472-477,478-483 1q3s d1q3sb1 B:431-456,458-474,477-481,484-488 1we3 d1we3n1 N:433-459,461-473,478-483,484-489 1a6d d1a6da1 A:427-453,455-470,473-478,481-486 1q3s d1q3se1 E:431-456,458-474,477-481,484-488 1q3s d1q3sd1 D:431-456,458-474,477-481,484-488 1q3q d1q3qa1 A:430-456,458-474,477-482,483-488 1q3q d1q3qd1 D:431-456,458-474,477-481,484-488 1q2v d1q2vb1 B:431-456,458-474,477-481,484-488 1q3r d1q3rb1 B:431-456,458-474,477-481,484-488 1q3s d1q3sa1 A:431-456,458-474,477-481,484-488 1q3q d1q3qb1 B:431-456,458-474,477-481,484-488 1q3r d1q3ra1 A:431-456,458-474,477-482,483-488 1q2v d1q2vd1 D:431-456,458-474,477-482,483-488 1q3q d1q3qc1 C:431-456,458-474,477-482,483-488 1q3r d1q3rc1 C:431-456,458-474,477-482,483-488 1q2v d1q2vc1 C:431-456,458-474,477-482,483-488 25. d.90.1 FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like core: (alpha-beta-alpha-beta)2; 3 layers a/b/a; antiparallel beta-sheet: 1243 1kqc d1kqca_ A:53-65,65-78,79-88,182-192 1oo6 d1oo6a_ A:53-65,64-78,79-88,182-192 1kqd d1kqda_ A:53-65,64-78,79-88,182-192 1idt d1idta_ A:53-65,64-78,79-88,182-192 1yki d1ykic1 C:53-65,64-78,79-88,182-192 1ylr d1ylra1 A:53-65,64-78,79-88,182-192 1nec d1necc_ C:52-64,63-77,78-87,181-191 1ylu d1ylub1 B:53-65,64-78,79-88,182-192 1yki d1ykib1 B:53-65,64-78,79-88,182-192 1icu d1icud_ D:53-65,64-78,79-88,182-192 1yki d1ykid1 D:53-65,64-78,79-88,182-192 1yki d1ykia1 A:53-65,64-78,79-88,182-192 1kqb d1kqba_ A:53-65,64-78,79-88,182-193 1ylu d1ylua1 A:53-65,64-78,79-88,182-192 1icu d1icua_ A:53-65,64-78,79-88,182-192 1icr d1icra_ A:53-65,64-78,79-88,182-193 1kqc d1kqcd_ D:53-65,64-78,79-88,182-193 1nec d1necb_ B:52-64,63-77,78-87,181-192 1kqd d1kqdd_ D:53-65,64-78,79-88,182-193 1nec d1neca_ A:52-64,63-77,78-87,181-192 1kqb d1kqbd_ D:53-65,64-78,79-88,182-193 1oon d1oona_ A:53-65,64-78,79-88,182-193 1icv d1icvb_ B:53-65,64-78,79-88,182-193 1kqc d1kqcb_ B:53-65,64-78,79-88,182-193 1kqd d1kqdb_ B:53-65,64-78,79-88,182-193 1kqb d1kqbb_ B:53-65,64-78,79-88,182-193 1vfr d1vfrb_ B:55-67,70-81,81-90,182-192 1v5y d1v5yb1 B:55-67,70-81,81-90,182-192 1vfr d1vfra_ A:55-69,70-81,81-90,182-192 1nec d1necd_ D:52-64,63-78,78-87,181-192 1v5z d1v5zb1 B:55-69,70-81,81-90,182-192 1v5y d1v5ya1 A:55-69,70-81,81-90,182-192 1v5z d1v5za1 A:55-69,70-81,81-90,182-192 1ds7 d1ds7a_ A:53-65,68-79,79-88,182-193 1ooq d1ooqa_ A:53-65,68-78,79-88,182-193 1oon d1oonb_ B:53-65,68-79,79-88,182-193 1icr d1icrb_ B:53-65,68-79,79-88,182-193 1ylr d1ylrb1 B:53-65,68-79,79-88,182-192 1icu d1icub_ B:53-65,68-78,79-88,182-192 1oo5 d1oo5a_ A:53-65,68-79,79-88,182-192 1kqb d1kqbc_ C:53-65,68-78,79-88,182-193 1oo6 d1oo6b_ B:53-65,68-79,79-88,182-192 1idt d1idtb_ B:53-65,68-79,79-88,182-192 1kqd d1kqdc_ C:53-65,68-78,79-88,182-193 1icv d1icvd_ D:53-65,68-78,79-88,182-192 1ooq d1ooqb_ B:53-65,68-78,79-88,182-193 1icv d1icva_ A:53-65,68-78,79-88,182-193 1icu d1icuc_ C:53-65,68-78,79-88,182-192 1kqc d1kqcc_ C:53-65,68-78,79-88,182-193 1ds7 d1ds7b_ B:53-67,68-79,79-88,182-193 1icv d1icvc_ C:53-65,68-78,79-88,182-192 1oo5 d1oo5b_ B:53-67,68-79,79-88,182-193 2fre d2freb1 B:64-75,75-85,86-95,152-163 2b67 d2b67b1 B:53-62,62-73,73-82,170-181 2ifa d2ifae1 E:55-74,75-93,93-101,168-178 2ifa d2ifab1 B:55-74,75-93,93-101,168-178 2b67 d2b67a1 A:53-61,61-72,73-82,170-181 2b67 d2b67c1 C:53-61,61-72,73-82,170-181 2ifa d2ifaa1 A:55-74,75-93,93-101,168-178 2fre d2frea1 A:64-74,75-85,86-95,152-163 2ifa d2ifac1 C:55-74,75-93,93-101,168-178 2b67 d2b67d1 D:53-61,61-72,73-82,170-181 2ifa d2ifaf1 F:55-71,75-93,93-102,167-178 1ywq d1ywqa1 A:57-76,77-94,95-103,170-180 2ifa d2ifad1 D:55-74,75-93,93-102,167-178 1vkw d1vkwa_ A:2-10,61-83,84-90,99-105 1ywq d1ywqa1 A:7-16,117-144,145-151,170-180 2bkj d2bkjb_ B:2-11,97-123,124-130,148-159 1bkj d1bkjb_ B:2-11,97-123,124-130,148-159 2bkj d2bkja_ A:2-11,97-123,124-130,148-159 1bkj d1bkja_ A:2-11,97-123,124-130,148-159 1f5v d1f5va_ A:2-11,97-123,124-130,148-159 1f5v d1f5vb_ B:2-11,97-123,124-130,148-159 26. d.197.1 Protein-L-isoaspartyl O-methyltransferase, C-terminal domain Protein-L-isoaspartyl O-methyltransferase, C-terminal domain beta-alpha-beta(4)-alpha-beta(2); 3 layers: beta/alpha/beta; buried helix 1dl5 d1dl5b2 B:236-249,280-294,301-307,310-315 1dl5 d1dl5a2 A:236-249,280-294,301-307,310-315 28. d.55.1 Ribosomal protein L22 some topological similarity to prokaryotic ribosomal protein L17 ! Ribosomal protein L22 beta-alpha(3)-beta(2); 2 layers: alpha/beta; related to the enolase/MLE N-domain fold by a circular permutation 2qbi d2qbis1 S:28-40,41-63,69-79,100-109 3df2 d3df2s1 S:28-40,41-63,69-79,100-109 1yj9 d1yj9r1 R:39-53,81-103,109-120,139-149 2gya d2gyaq1 Q:28-39,41-63,68-79,99-110 1i4j d1i4jb_ B:28-40,41-63,68-86,97-110 1i4j d1i4ja_ A:28-39,41-63,68-86,96-110 2vhm d2vhms1 S:28-40,41-63,69-84,96-109 1vsa d1vsaq1 Q:28-39,41-63,68-86,94-110 1bxe d1bxea_ A:28-39,43-63,68-86,94-110 2hgq d2hgqv1 V:28-40,43-63,68-87,93-110 2b9n d2b9nw1 W:28-39,41-63,68-89,92-110 2b9p d2b9pw1 W:28-39,41-63,68-89,92-110 2b66 d2b66w1 W:28-39,41-63,68-89,92-110 2qao d2qaos1 S:28-40,41-62,69-89,91-109 2z4n d2z4ns1 S:28-40,41-62,69-89,91-109 2qam d2qams1 S:28-40,41-62,69-89,91-109 2z4l d2z4ls1 S:28-40,41-62,69-89,91-109 2hgj d2hgjv1 V:28-40,41-63,68-89,91-110 2qp1 d2qp1s1 S:28-39,41-63,69-89,91-109 2qoz d2qozs1 S:28-39,41-63,69-89,91-109 2qbk d2qbks1 S:28-40,41-63,69-89,91-109 2qbc d2qbcs1 S:28-40,41-63,69-89,91-109 2qba d2qbas1 S:28-40,41-63,69-89,91-109 1yjn d1yjnr1 R:39-53,81-103,109-129,131-149 3ccs d3ccsr1 R:39-53,81-103,109-129,131-149 1vqm d1vqmr1 R:39-53,81-103,109-129,131-149 2gyc d2gycq1 Q:28-39,41-63,68-88,92-110 1vqk d1vqkr1 R:39-53,81-103,109-129,131-149 1vq5 d1vq5r1 R:39-53,81-103,109-129,131-149 1yit d1yitr1 R:39-53,81-103,109-129,131-149 1vq9 d1vq9r1 R:39-53,81-103,109-129,131-149 1vqp d1vqpr1 R:39-53,81-103,109-129,131-149 3ccq d3ccqr1 R:39-53,81-103,109-129,131-149 1vq4 d1vq4r1 R:39-53,81-103,109-129,131-149 2hgu d2hguv1 V:28-40,41-63,68-89,91-110 1vql d1vqlr1 R:39-53,81-103,109-129,131-149 3ccr d3ccrr1 R:39-53,81-103,109-129,131-149 3cme d3cmer1 R:39-53,81-103,109-129,131-149 1vq6 d1vq6r1 R:39-53,81-103,109-129,131-149 1yij d1yijr1 R:39-53,81-103,109-129,131-149 2otj d2otjr1 R:39-53,81-103,109-129,131-149 1ffk d1ffko_ O:39-53,81-103,109-129,131-149 1vqn d1vqnr1 R:39-53,81-103,109-129,131-149 1yjw d1yjwr1 R:39-53,81-103,109-129,131-149 1yi2 d1yi2r1 R:39-53,81-103,109-129,131-149 1vq8 d1vq8r1 R:39-53,81-103,109-129,131-149 1vq7 d1vq7r1 R:39-53,81-103,109-129,131-149 1yhq d1yhqr1 R:39-53,81-103,109-129,131-149 3cc7 d3cc7r1 R:39-53,81-103,109-129,131-149 1kd1 d1kd1s_ S:39-53,81-103,109-129,131-149 2qbg d2qbgs1 S:28-40,41-63,69-89,91-109 1vqo d1vqor1 R:39-53,81-103,109-129,131-149 1nji d1njis_ S:39-53,81-103,109-129,131-149 1q81 d1q81s_ S:39-53,81-103,109-129,131-149 2qbe d2qbes1 S:28-40,41-63,69-89,91-109 1m90 d1m90s_ S:39-53,81-103,109-129,131-149 1m1k d1m1ks_ S:39-53,81-103,109-129,131-149 3ccj d3ccjr1 R:39-53,81-103,109-129,131-149 3ccv d3ccvr1 R:39-53,81-103,109-129,131-149 3ccl d3cclr1 R:39-53,81-103,109-129,131-149 1k73 d1k73s_ S:39-53,81-103,109-129,131-149 1q82 d1q82s_ S:39-53,81-103,109-129,131-149 3cce d3ccer1 R:39-53,81-103,109-129,131-149 3cc4 d3cc4r1 R:39-53,81-103,109-129,131-149 3cd6 d3cd6r1 R:39-53,81-103,109-129,131-149 1kc8 d1kc8s_ S:39-53,81-103,109-129,131-149 1k9m d1k9ms_ S:39-53,81-103,109-129,131-149 3ccu d3ccur1 R:39-53,81-103,109-129,131-149 1kqs d1kqsq_ Q:39-53,81-103,109-129,131-149 1k8a d1k8as_ S:39-53,81-103,109-129,131-149 1s72 d1s72r_ R:39-53,81-103,109-129,131-149 1q86 d1q86s_ S:39-53,81-103,109-129,131-149 3cma d3cmar1 R:39-53,81-103,109-129,131-149 1qvg d1qvgq_ Q:39-53,81-103,109-129,131-149 1n8r d1n8rs_ S:39-53,81-103,109-129,131-149 3cpw d3cpwq1 Q:39-53,81-103,109-129,131-149 1jj2 d1jj2q_ Q:39-53,81-103,109-129,131-149 1qvf d1qvfq_ Q:39-53,81-103,109-129,131-149 3cc2 d3cc2r1 R:39-53,81-103,109-129,131-149 2otl d2otlr1 R:39-53,81-103,109-129,131-149 3ccm d3ccmr1 R:39-53,81-103,109-129,131-149 2qa4 d2qa4r1 R:39-53,81-103,109-129,131-149 2i2t d2i2ts1 S:28-40,41-63,69-89,91-109 2i2v d2i2vs1 S:28-40,41-63,69-89,91-109 1q7y d1q7ys_ S:39-53,81-103,109-129,131-149 3df4 d3df4s1 S:28-40,41-63,69-89,91-109 2zjp d2zjpp1 P:49-60,62-84,89-109,113-131 2qox d2qoxs1 S:28-40,41-63,69-89,91-109 2qov d2qovs1 S:28-40,41-63,69-89,91-109 2qex d2qexr1 R:39-53,81-103,109-129,131-149 2zjq d2zjqp1 P:49-60,62-84,89-110,112-131 3cf5 d3cf5p1 P:49-60,62-84,89-110,112-131 3dll d3dllp1 P:49-60,62-84,89-110,112-131 2zjr d2zjrp1 P:49-60,62-84,89-110,112-131 2j01 d2j01w1 W:28-39,41-63,68-89,91-110 2j03 d2j03w1 W:28-39,41-63,68-89,91-110 2vhn d2vhns1 S:28-40,41-63,69-89,91-109 1xbp d1xbpq1 Q:49-60,62-84,89-111,112-131 1yl3 d1yl3s1 S:28-39,41-63,70-88,92-108 29. d.150.1 4'-phosphopantetheinyl transferase possibly related to the IspF ( 4'-phosphopantetheinyl transferase beta-alpha(3)-beta(2) motif 1f80 d1f80c_ C:31-41,42-65,77-83,85-91 1f7l d1f7la_ A:31-41,42-65,77-83,85-91 1f7t d1f7tf_ F:31-41,42-65,77-83,85-91 1f7t d1f7td_ D:31-41,42-65,76-83,85-92 1f7t d1f7ta_ A:31-41,42-65,76-83,85-92 1f7t d1f7tc_ C:31-41,42-65,77-83,85-91 1fte d1ftec_ C:3033-3044,3044-3067,3078-3084,3086-3093 1ftf d1ftfc_ C:3033-3044,3044-3067,3078-3084,3086-3093 1f7t d1f7tb_ B:31-42,42-65,77-83,85-91 1ftf d1ftfb_ B:2033-2044,2044-2067,2078-2084,2086-2093 1fte d1fteb_ B:2033-2044,2044-2067,2078-2084,2086-2093 1f80 d1f80b_ B:31-42,42-65,76-83,85-92 1f80 d1f80a_ A:31-42,42-65,76-83,85-92 1fte d1ftea_ A:1033-1044,1044-1067,1078-1084,1086-1093 1fth d1fthb_ B:2033-2044,2044-2067,2078-2084,2086-2093 1fth d1fthc_ C:3033-3044,3044-3067,3078-3084,3086-3092 1ftf d1ftfa_ A:1033-1044,1044-1067,1078-1084,1086-1093 1f7t d1f7te_ E:31-42,42-65,77-83,85-91 1fth d1ftha_ A:1033-1044,1044-1067,1078-1084,1086-1093 1qr0 d1qr0a1 A:25-35,37-60,68-72,74-78 35. d.47.1 Ribosomal L11/L12e N-terminal domain Ribosomal L11/L12e N-terminal domain beta-alpha(2)-beta(2); 2 layers, alpha/beta; antiparallel beta-sheet: order 123 2h8w d2h8wa2 A:21-28,33-49,51-60,64-69 2hgu d2hgul2 L:19-31,33-46,52-61,65-70 2hgj d2hgjl2 L:19-31,33-46,52-59,65-70 2hgq d2hgql2 L:19-31,33-46,52-59,65-70 3cjs d3cjsb1 B:20-31,33-49,51-61,63-71 2b9p d2b9pk2 K:20-32,34-47,52-60,66-71 3cjs d3cjsc1 C:20-31,33-49,51-61,63-70 3cjr d3cjrb2 B:20-31,33-49,51-61,63-70 2nxn d2nxnb2 B:20-31,33-49,51-61,63-71 3cjq d3cjqh2 H:20-31,33-49,51-61,63-70 1yl3 d1yl3l2 L:20-32,34-47,52-61,65-71 3cjq d3cjqb2 B:21-31,33-49,51-61,63-71 3cjq d3cjqe2 E:21-31,33-49,51-61,63-70 3egv d3egvb1 B:21-31,33-49,51-61,63-70 1mms d1mmsa2 A:20-32,34-50,50-62,64-72 2bcw d2bcwa1 A:20-32,34-50,50-62,64-72 3cjt d3cjtf2 F:21-31,33-46,51-61,63-71 3cjt d3cjtn2 N:21-31,33-46,51-61,63-71 3cjt d3cjtb2 B:21-31,33-46,51-61,63-71 3cjt d3cjtj2 J:21-31,33-46,51-61,63-72 2vhm d2vhmi2 I:23-31,33-49,52-61,65-72 2gya d2gyag2 G:23-31,33-46,55-61,65-71 2vhn d2vhni2 I:23-31,33-49,54-62,64-72 2gyc d2gycg2 G:23-31,33-46,56-61,65-70 2awb d2awbi2 I:23-31,33-49,52-62,64-71 2j28 d2j28i2 I:23-31,33-49,52-62,64-71 2aw4 d2aw4i2 I:23-31,33-49,52-62,64-71 2rdo d2rdoi2 I:23-31,33-49,52-62,64-71 1vs8 d1vs8i2 I:23-31,33-49,52-62,64-71 2qao d2qaoi2 I:23-31,33-49,52-62,64-71 2qbk d2qbki2 I:23-31,33-49,52-62,64-71 2qbg d2qbgi2 I:23-31,33-49,52-62,64-71 2z4n d2z4ni2 I:23-31,33-49,52-62,64-71 1vs6 d1vs6i2 I:23-31,33-49,52-62,64-71 2qbc d2qbci2 I:23-31,33-49,52-62,64-71 2i2v d2i2vi2 I:23-31,33-49,52-62,64-71 2qox d2qoxi2 I:23-31,33-49,52-62,64-71 3df4 d3df4i2 I:23-31,33-49,52-62,64-71 2qp1 d2qp1i2 I:23-31,33-49,52-62,64-71 2qam d2qami2 I:23-31,33-49,52-62,64-71 2qbi d2qbii2 I:23-31,33-49,52-62,64-71 2z4l d2z4li2 I:23-31,33-49,52-62,64-71 2qbe d2qbei2 I:23-31,33-49,52-62,64-71 2i2t d2i2ti2 I:23-31,33-49,52-62,64-71 2qba d2qbai2 I:23-31,33-49,52-62,64-71 3df2 d3df2i2 I:23-31,33-49,52-62,64-71 2qov d2qovi2 I:23-31,33-49,52-62,64-71 2qoz d2qozi2 I:23-31,33-49,52-62,64-71 3deg d3degh2 H:23-31,33-49,52-62,64-73 2e34 d2e34a2 A:23-31,33-49,50-61,63-67 2zjq d2zjqf2 F:23-31,33-49,51-61,63-70 2e35 d2e35a2 A:23-31,33-49,50-61,63-67 37. e.6.1 Acyl-CoA dehydrogenase NM domain-like flavoprotein: binds FAD; constituent families differ in the numbers of C-terminal domains (four-helical bundles) ! Acyl-CoA dehydrogenase NM domain-like 2 domains: (1) all-alpha: 5 helices; (2) contains an open beta-sheet barrel: n*=5, S*=8; complex topology 1u8v d1u8vc2 C:100-124,126-142,196-203,214-221 1u8v d1u8vb2 B:100-124,126-142,196-203,214-221 1u8v d1u8va2 A:100-124,126-142,196-203,214-221 1u8v d1u8vd2 D:100-124,126-142,196-203,214-221 1rx0 d1rx0c2 C:94-115,116-130,177-185,192-200 2zaf d2zafa2 A:87-108,109-118,182-191,207-214 1rx0 d1rx0d2 D:94-115,116-130,177-185,192-200 1rx0 d1rx0a2 A:94-115,116-130,177-185,192-200 2zaf d2zafb2 B:87-108,109-118,182-191,207-214 1rx0 d1rx0b2 B:94-115,116-130,177-185,192-200 2reh d2rehc2 C:87-108,109-118,182-191,208-214 2zaf d2zafc2 C:87-108,109-118,182-191,207-214 1ege d1egea2 A:91-112,113-128,173-182,193-201 1w07 d1w07b3 B:97-114,115-129,184-195,200-208 1w07 d1w07a3 A:97-114,115-129,184-195,200-208 1egd d1egdd2 D:91-112,113-128,173-182,193-201 1buc d1bucb2 B:83-105,106-120,168-176,184-192 2ddh d2ddha3 A:98-112,116-130,185-196,201-209 1jqi d1jqia2 A:85-107,108-122,169-177,185-193 1ukw d1ukwa2 A:111-132,133-148,194-202,210-218 1is2 d1is2b3 B:98-115,116-130,185-196,201-209 1is2 d1is2a3 A:98-115,116-130,185-196,201-209 1ukw d1ukwb2 B:111-132,133-148,194-202,210-218 1ege d1egeb2 B:91-112,113-128,173-182,193-201 2cx9 d2cx9d2 D:82-104,105-119,166-174,186-194 1jqi d1jqib2 B:485-507,508-522,569-577,585-593 2c12 d2c12a2 A:87-107,109-118,182-191,208-214 2c12 d2c12b2 B:87-107,109-118,182-191,208-214 2c12 d2c12e2 E:87-107,109-118,182-191,208-214 2c0u d2c0ua2 A:87-107,109-118,182-191,208-214 1r2j d1r2ja2 A:68-89,90-104,150-159,161-170 2a1t d2a1ta2 A:91-112,113-128,174-182,193-201 2c0u d2c0uc2 C:87-107,109-118,182-191,208-214 2reh d2rehd2 D:87-107,109-118,182-191,208-214 2c12 d2c12f2 F:87-107,109-118,182-191,208-214 2reh d2rehb2 B:87-107,109-118,182-191,208-214 1udy d1udyc2 C:91-112,113-128,174-182,193-201 2c12 d2c12d2 D:87-107,109-118,182-191,207-214 2c12 d2c12c2 C:87-107,109-118,182-191,207-214 1t9g d1t9gd2 D:91-112,113-128,174-182,193-201 1ege d1egec2 C:91-112,113-128,174-182,193-201 1ege d1eged2 D:91-112,113-128,174-182,193-201 2cx9 d2cx9c2 C:82-104,105-119,166-174,185-194 2zaf d2zafd2 D:87-107,109-118,182-191,207-214 1t9g d1t9gb2 B:91-112,113-128,173-182,192-201 1egc d1egcd2 D:91-112,113-128,174-182,193-201 2d29 d2d29a2 A:82-104,105-119,166-174,185-194 1ws9 d1ws9a2 A:82-104,105-119,166-174,185-194 2d29 d2d29b2 B:82-104,105-119,166-174,185-194 2reh d2reha2 A:87-107,109-118,182-191,207-214 2a1t d2a1td2 D:91-112,113-128,174-182,193-201 2a1t d2a1tc2 C:91-112,113-128,174-182,193-201 2c0u d2c0ub2 B:87-107,109-123,182-191,208-214 1ivh d1ivha2 A:90-112,113-127,174-182,191-200 1ws9 d1ws9b2 B:82-104,105-119,166-174,185-194 1udy d1udya2 A:91-112,113-128,174-182,192-201 1ivh d1ivhd2 D:90-112,113-127,174-182,191-200 1ivh d1ivhb2 B:90-112,113-127,174-182,191-200 3mdd d3mddb2 B:91-112,113-128,174-182,192-201 1ivh d1ivhc2 C:90-112,113-127,174-182,191-200 1udy d1udyd2 D:91-112,113-128,174-182,192-201 1t9g d1t9ga2 A:91-112,113-128,174-182,192-201 2c0u d2c0ud2 D:87-107,109-123,182-191,208-214 1egd d1egdc2 C:91-112,113-128,174-182,192-201 1udy d1udyb2 B:91-112,113-128,174-182,192-201 1egd d1egda2 A:91-112,113-128,174-182,192-201 1egc d1egca2 A:91-112,113-128,174-182,192-201 3mde d3mdea2 A:91-112,113-128,174-182,192-201 1egc d1egcb2 B:91-112,113-128,174-182,192-201 3mde d3mdeb2 B:91-112,113-128,174-182,192-201 1egd d1egdb2 B:91-112,113-128,174-182,192-201 1egc d1egcc2 C:91-112,113-128,174-182,192-201 3mdd d3mdda2 A:91-112,113-128,174-182,192-201 1t9g d1t9gc2 C:91-112,113-128,174-182,192-201 2a1t d2a1tb2 B:91-112,113-128,174-182,192-201 2cx9 d2cx9b2 B:82-104,105-119,166-175,185-194 2r0n d2r0na2 A:90-112,113-127,176-185,187-196 1siq d1siqa2 A:90-112,113-127,176-185,187-196 1sir d1sira2 A:90-112,113-127,176-185,187-196 2r0m d2r0ma2 A:90-112,113-127,176-185,187-196 2cx9 d2cx9a2 A:82-104,105-119,166-177,186-194 42. d.345.1 NRDP1 C-terminal domain-like NRDP1 C-terminal domain-like alpha-beta-alpha(3)-beta(3); a pseudo barrel beta-sheet of an SH3-like topology, surrounded by helices 2fzp d2fzpa1 A:222-237,239-252,284-289,305-311 2ogb d2ogbb1 B:222-237,239-252,284-289,305-311 2gwf d2gwfb1 B:222-237,239-252,284-289,305-311 2gwf d2gwfd1 D:222-237,239-252,284-290,304-311 2gwf d2gwff1 F:222-237,239-252,284-290,304-311 2ogb d2ogba1 A:222-237,239-252,284-290,304-311 45. d.135.1 The spindle assembly checkpoint protein mad2 N- and C-termini undergo large conformational rearrangement upon ligand binding ! The spindle assembly checkpoint protein mad2 core: alpha(2)-beta(2)-alpha-beta; mixed sheet: order 213 1duj d1duja_ A:18-38,60-77,82-94,149-161 1klq d1klqa_ A:13-38,60-82,82-93,150-160 1go4 d1go4c_ C:12-36,58-79,80-92,148-159 1go4 d1go4a_ A:12-36,58-79,80-92,148-159 1go4 d1go4b_ B:12-36,58-79,80-92,148-159 2v64 d2v64a1 A:12-36,58-79,80-92,148-158 2v64 d2v64f1 F:12-36,58-79,80-92,148-158 1s2h d1s2ha_ A:10-36,58-80,81-92,148-157 2v64 d2v64c1 C:12-36,58-79,80-92,148-158 1go4 d1go4d_ D:12-36,58-79,80-92,148-159 49. d.36.1 Chalcone isomerase Chalcone isomerase beta(3)-alpha(2)-beta-alpha(2)-beta3; 2 layers alpha/beta; antiparallel sheet: order 1234567 1eyq d1eyqb_ B:102-122,125-143,147-156,158-167 1jx1 d1jx1d_ D:102-122,125-143,147-156,158-167 1eyq d1eyqa_ A:102-122,125-143,147-156,158-167 1jx0 d1jx0a_ A:102-122,125-143,147-156,158-167 1eyp d1eypb_ B:102-122,125-142,147-156,158-167 1jx1 d1jx1b_ B:102-122,125-142,147-156,158-167 1jx1 d1jx1e_ E:102-122,125-142,147-156,158-167 1jep d1jepb_ B:102-122,125-142,147-156,158-167 1jep d1jepa_ A:102-122,125-142,147-156,158-167 1fm7 d1fm7b_ B:102-122,125-142,147-156,158-167 1fm7 d1fm7a_ A:102-122,125-142,147-156,158-167 1eyp d1eypa_ A:102-122,125-142,147-156,158-167 1fm8 d1fm8a_ A:102-122,125-142,147-156,158-167 1jx1 d1jx1a_ A:102-122,125-141,147-156,158-167 1jx0 d1jx0b_ B:102-122,125-142,147-156,158-167 1jx1 d1jx1f_ F:102-122,125-142,145-156,158-167 1jx1 d1jx1c_ C:102-122,125-142,145-156,158-167 1fm8 d1fm8b_ B:102-122,125-142,145-156,158-167 53. d.340.1 CofE-like CofE-like consists of two different domains; d1: beta-alpha-beta-alpha-beta(2)-alpha-beta, mixed sheet of 5 strands, order:15234, strands 2 and 3 are parralel; d2 is inserted in d1 after strand 2 and comprises a helix-turn-helix motif and two 3-stranded sheets 2g9i d2g9ib1 B:59-70,72-84,83-90,92-98 2phn d2phnb1 B:59-70,72-83,83-90,92-98 2phn d2phna1 A:59-70,72-83,83-90,92-98 2g9i d2g9ia1 A:59-70,72-83,83-90,92-98 54. d.58.32 FAD-linked oxidases, C-terminal domain duplication: contains two subdomains of this fold ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1dii d1diib1 B:254-266,402-421,425-431,433-444 1dii d1diia1 A:254-266,402-421,425-431,433-444 1w1l d1w1lb1 B:285-297,432-451,455-462,463-475 1i19 d1i19b1 B:299-308,440-466,472-481,510-520 2i0k d2i0ka1 A:299-308,440-466,472-481,510-520 1i19 d1i19a1 A:299-308,440-466,472-481,510-520 1e8g d1e8gb1 B:285-297,432-451,455-461,463-475 1e8g d1e8ga1 A:285-297,432-451,455-462,463-475 1w1s d1w1sa1 A:258-271,404-420,425-435,450-461 1w1q d1w1qa1 A:258-271,404-420,425-435,450-461 1w1o d1w1oa1 A:258-271,404-420,425-435,450-461 1w1r d1w1ra1 A:258-271,404-420,425-435,450-461 2vao d2vaob1 B:285-303,432-451,455-461,463-475 2vao d2vaoa1 A:285-303,432-451,455-461,463-475 1w1l d1w1la1 A:285-303,432-451,455-462,463-475 1qlu d1qlua1 A:285-303,432-451,455-461,463-475 1w1k d1w1ka1 A:285-303,432-451,455-462,463-475 1dzn d1dzna1 A:285-303,432-451,455-462,463-475 1e8f d1e8fa1 A:285-303,432-451,455-461,463-475 1w1m d1w1ma1 A:285-303,432-451,455-462,463-475 1qlu d1qlub1 B:285-303,432-451,455-461,463-475 1dzn d1dznb1 B:285-303,432-451,455-462,463-475 1vao d1vaoa1 A:285-303,432-451,455-462,463-475 1vao d1vaob1 B:285-303,432-451,455-462,463-475 1w1j d1w1ja1 A:285-303,432-451,455-462,463-475 1w1j d1w1jb1 B:285-303,432-451,455-462,463-475 1e8h d1e8ha1 A:285-303,432-451,455-462,463-475 1ahu d1ahua1 A:285-303,432-451,455-461,463-475 1ahu d1ahub1 B:285-303,432-451,455-461,463-475 1qlt d1qlta1 A:285-303,432-451,455-462,463-475 1qlt d1qltb1 B:285-303,432-451,455-462,463-475 1e8f d1e8fb1 B:285-303,432-451,455-462,463-475 1w1k d1w1kb1 B:285-303,432-451,455-462,463-475 1e0y d1e0ya1 A:285-303,432-451,455-462,463-475 1e0y d1e0yb1 B:285-303,432-451,455-462,463-475 1e8h d1e8hb1 B:285-303,432-451,455-462,463-475 1w1m d1w1mb1 B:285-303,432-451,455-462,463-475 1diq d1diqb1 B:254-272,402-421,425-431,433-444 1diq d1diqa1 A:254-272,402-421,425-431,433-444 1ahz d1ahzb1 B:285-303,432-451,455-461,463-475 1ahz d1ahza1 A:285-303,432-451,455-461,463-475 1ahv d1ahva1 A:285-303,432-451,455-461,463-475 1ahv d1ahvb1 B:285-303,432-451,455-461,463-475 1wve d1wvea1 A:254-272,402-421,425-431,433-446 1wve d1wveb1 B:254-272,402-421,425-431,433-446 1wvf d1wvfa1 A:254-272,402-421,425-431,433-446 56. e.51.1 Urocanase Urocanase 3 domains; d1: alpha+beta [alpha(2)-beta(3); mixed sheet: 213]; d2: alpha/beta of the NAD(P)-binding Rossmann-fold superfamily (scop_sf 51735, most similar to scop_fa 51883 and scop_fa 51736); d3: alpha+beta of the glutamine synthetase/guanido kinase fold (scop_cf 55930); d1 and d3 form a single beta-sheet 1x87 d1x87a_ A:19-34,56-70,72-80,81-91 1w1u d1w1ua_ A:24-39,61-75,77-85,86-96 1x87 d1x87b_ B:19-34,56-70,72-80,81-91 1uwk d1uwka_ A:24-39,61-75,77-85,86-96 1uwl d1uwla_ A:24-39,61-75,77-85,86-96 1uwk d1uwkb_ B:24-39,61-75,77-85,86-96 1w1u d1w1ub_ B:24-39,61-75,77-85,86-96 1uwl d1uwlb_ B:24-39,61-75,77-85,86-96 57. a.160.1 PAP/OAS1 substrate-binding domain this domain follows the catalytic nucleotidyltransferase domain ! PAP/OAS1 substrate-binding domain core: 5-helical bundle; up-and-down; right-handed twist 1tfy d1tfyd1 D:171-183,184-195,198-204,205-211 2dr5 d2dr5a1 A:171-183,184-195,198-204,205-211 1tfw d1tfwb1 B:171-183,184-195,198-204,205-211 1tfw d1tfwc1 C:171-183,184-195,198-204,205-211 1tfy d1tfya1 A:171-183,184-195,198-204,205-211 2zh4 d2zh4a1 A:171-183,184-195,198-204,205-211 2zh6 d2zh6a1 A:171-183,184-195,198-204,205-211 1tfy d1tfyb1 B:171-183,184-195,198-204,205-211 1sz1 d1sz1a1 A:171-183,184-195,198-204,205-211 1sz1 d1sz1b1 B:171-183,184-195,198-204,205-211 2dvi d2dvia1 A:171-183,184-195,198-204,205-211 2dra d2draa1 A:171-183,184-195,198-204,205-211 2dr8 d2dr8a1 A:171-183,184-195,198-204,205-211 1r8b d1r8ba1 A:171-183,184-195,198-204,205-211 2zh2 d2zh2a1 A:171-183,184-195,198-204,205-211 1ueu d1ueua1 A:171-183,184-195,198-204,205-211 1tfy d1tfyc1 C:171-183,184-195,198-204,205-211 1r8a d1r8aa1 A:171-183,184-195,198-204,205-211 2drb d2drba1 A:171-183,184-195,198-204,205-211 2zh5 d2zh5a1 A:171-183,184-195,198-204,205-211 1r89 d1r89a1 A:171-183,184-195,198-204,205-211 2dr9 d2dr9a1 A:171-183,184-195,198-204,205-211 2zh3 d2zh3a1 A:171-183,184-195,198-204,205-211 1uev d1ueva1 A:171-183,184-195,198-204,205-211 2dr7 d2dr7a1 A:171-183,184-195,198-204,205-211 2zh1 d2zh1a1 A:171-183,184-195,198-204,205-211 1uet d1ueta1 A:171-183,184-195,198-204,205-211 2zhb d2zhba1 A:171-183,184-195,198-204,205-211 2zh8 d2zh8a1 A:171-183,184-195,198-204,205-211 2zh9 d2zh9a1 A:171-183,184-195,198-204,205-211 1tfw d1tfwd1 D:171-183,184-195,198-203,206-211 62. d.275.1 Hut operon positive regulatory protein HutP Hut operon positive regulatory protein HutP alpha(2)-beta-alpha(2)-beta(3); 3 layers: a/b/a; antiparallel beta-sheet: order 1234 1wrq d1wrqa1 A:46-62,68-88,98-110,118-131 1wro d1wrob1 B:46-62,68-88,98-110,118-131 1wmq d1wmqa1 A:46-62,68-88,98-110,118-131 1wpu d1wpub1 B:46-62,68-88,98-110,118-131 1wmq d1wmqb1 B:46-62,68-88,98-110,118-131 3boy d3boyc1 C:46-62,68-88,98-110,118-131 1wpu d1wpua1 A:46-62,68-88,98-110,118-131 1wpv d1wpvc1 C:46-62,68-88,98-110,118-131 3boy d3boya1 A:46-62,68-88,98-110,118-131 3boy d3boyb1 B:46-62,68-88,98-110,118-131 1wrq d1wrqb1 B:46-62,68-88,98-110,118-131 1wro d1wroa1 A:46-62,68-88,98-110,118-131 1wpv d1wpva1 A:46-62,68-88,98-110,118-131 1wrn d1wrna1 A:46-62,68-88,98-110,118-131 1wrn d1wrnc1 C:46-62,68-88,98-110,118-131 1wro d1wroc1 C:46-62,68-88,98-110,118-131 1wpv d1wpvb1 B:46-62,68-88,98-110,118-131 1wpt d1wptb1 B:46-62,68-88,99-110,119-131 1wps d1wpsa1 A:46-62,68-88,99-110,119-131 1wrn d1wrnb1 B:46-62,68-88,98-110,119-131 1wpt d1wpta1 A:46-62,68-88,99-110,119-131 1vea d1veaa_ A:46-62,68-88,99-110,119-131 1vea d1veab_ B:46-62,68-88,99-110,119-131 1wps d1wpsb1 B:46-62,68-88,99-110,119-131 64. d.17.4 NTF2-like has a beta-alpha(2)-beta insertion after the main helix ! Cystatin-like Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet 1q40 d1q40d_ D:323-332,388-400,471-484,488-501 1jkg d1jkgb_ B:402-411,458-470,507-523,525-539 1q40 d1q40b_ B:323-332,388-400,471-484,488-501 1gyb d1gybb_ B:23-32,46-57,96-109,110-122 1jn5 d1jn5b_ B:402-411,458-470,509-523,525-539 1gy7 d1gy7b_ B:23-32,46-57,96-109,110-122 1k41 d1k41b_ B:224-233,249-260,297-309,311-320 1nww d1nwwa_ A:39-48,63-78,108-124,125-134 1m98 d1m98a2 A:211-220,235-248,285-296,298-309 1nww d1nwwb_ B:39-48,63-78,108-124,125-134 1nu3 d1nu3a_ A:39-48,63-78,108-124,125-134 1nu3 d1nu3b_ B:39-48,63-78,108-124,125-134 1m98 d1m98b2 B:211-220,235-248,285-296,298-309 1gyb d1gybd_ D:23-32,46-57,96-109,110-122 1gy7 d1gy7d_ D:23-32,46-57,96-109,110-122 1c7h d1c7ha_ A:24-33,49-61,97-109,111-120 1of5 d1of5a_ A:295-304,357-369,440-455,456-470 1dmq d1dmqa_ A:24-33,49-61,97-109,111-120 1e97 d1e97a_ A:24-33,49-61,97-109,111-120 1dmm d1dmma_ A:24-33,49-61,97-109,111-120 1gyb d1gybc_ C:23-32,46-57,96-109,110-122 1gy7 d1gy7a_ A:23-32,46-58,96-109,110-122 1a2k d1a2ka_ A:25-34,48-59,96-109,110-122 1gy7 d1gy7c_ C:23-32,46-58,96-109,110-123 1vzz d1vzza_ A:24-33,49-62,96-109,111-120 1qma d1qmab_ B:25-34,48-59,96-109,110-122 1qma d1qmad_ D:25-34,48-59,96-109,110-122 1jb2 d1jb2b_ B:25-34,48-59,96-109,110-122 1a2k d1a2kb_ B:25-34,48-59,96-109,110-122 1gyb d1gyba_ A:23-32,46-58,96-109,110-122 1ar0 d1ar0a_ A:25-34,48-59,96-109,110-122 1jb4 d1jb4b_ B:25-34,48-59,96-109,110-122 1ask d1aska_ A:25-34,48-59,96-109,110-122 3blz d3blzc1 C:28-37,55-67,99-111,112-124 2k54 d2k54a1 A:20-29,45-60,89-103,104-119 1gy6 d1gy6a_ A:25-34,48-59,96-109,110-122 3blz d3blza1 A:28-37,55-67,99-111,112-124 1w02 d1w02a_ A:24-33,49-61,96-109,111-120 1jb5 d1jb5b_ B:25-34,48-59,96-109,110-122 1zx2 d1zx2a1 A:23-32,61-73,113-125,130-141 3blz d3blzj1 J:28-37,55-67,99-111,112-124 1ar0 d1ar0b_ B:25-34,48-59,96-109,110-122 1ask d1askb_ B:25-34,48-59,96-109,110-122 1qma d1qmaa_ A:25-34,48-59,96-109,110-122 3blz d3blzg1 G:28-37,55-67,99-111,112-124 1qma d1qmac_ C:25-34,48-59,96-109,110-122 1w01 d1w01a_ A:24-33,49-62,96-109,111-120 2qiy d2qiyb1 B:23-32,61-73,115-125,130-141 1buq d1buqb_ B:222-231,247-262,290-303,309-316 1gy5 d1gy5a_ A:25-34,48-59,96-109,110-122 3blz d3blzl1 L:28-37,55-67,99-111,112-124 1w00 d1w00a1 A:24-33,49-62,94-109,111-120 1oun d1ouna_ A:25-34,48-59,96-109,110-122 3blz d3blzf1 F:28-37,55-67,99-111,112-124 1jb5 d1jb5a_ A:25-34,48-59,97-109,110-123 3cu3 d3cu3a1 A:32-41,56-73,112-123,126-137 1gy6 d1gy6b_ B:25-34,48-59,96-109,110-122 1zx2 d1zx2b1 B:23-32,61-73,114-125,130-142 1z1s d1z1sa1 A:18-27,47-58,93-109,110-120 2z7a d2z7ad1 D:24-33,56-71,103-117,119-128 3blz d3blzk1 K:28-37,55-67,99-111,112-124 3blz d3blzi1 I:28-37,55-67,99-111,112-124 1k41 d1k41a_ A:24-33,49-60,94-109,111-120 1gy5 d1gy5b_ B:25-34,48-59,96-109,110-123 3cpo d3cpoa1 A:24-33,49-61,94-109,111-120 3blz d3blzd1 D:28-37,55-67,99-111,112-124 1oun d1ounb_ B:25-34,48-59,96-109,110-122 1isk d1iska_ A:22-31,47-62,90-103,110-116 1w00 d1w00b1 B:24-33,49-61,94-109,111-120 1zo2 d1zo2a1 A:28-37,51-63,99-112,114-126 3blz d3blze1 E:28-37,55-67,99-111,112-124 3blz d3blzh1 H:28-37,55-67,99-111,112-124 1buq d1buqa_ A:22-31,47-62,90-103,110-116 1e3v d1e3vb_ B:24-33,49-61,94-109,111-120 1jb4 d1jb4a_ A:25-34,48-59,96-109,110-123 2z7a d2z7ac1 C:24-33,56-71,103-117,119-128 2inx d2inxa1 A:24-33,49-61,94-109,111-120 1vzz d1vzzb_ B:24-33,49-62,94-109,111-120 1tuh d1tuha_ A:39-48,67-83,113-128,129-139 1ogx d1ogxa_ A:24-33,49-62,94-109,111-120 1jb2 d1jb2a_ A:25-34,48-59,93-109,110-122 1cqs d1cqsa_ A:24-33,49-62,94-109,111-120 1e3r d1e3rb_ B:24-33,49-62,94-109,111-120 1u5o d1u5oa_ A:25-34,48-59,93-109,110-122 1cqs d1cqsb_ B:224-233,249-262,294-309,311-320 2z77 d2z77d1 D:24-33,56-72,102-117,119-128 1of5 d1of5b_ B:38-46,61-73,144-155,165-177 2a15 d2a15a1 A:24-33,56-72,102-117,119-128 2qiy d2qiya1 A:23-32,61-73,110-125,130-141 1s5a d1s5aa_ A:24-33,53-68,100-116,117-126 1gs3 d1gs3a_ A:24-33,49-61,94-109,111-120 1oho d1ohoa1 A:24-33,49-61,94-109,111-120 1s5a d1s5ac_ C:24-33,53-68,100-116,117-126 1opy d1opya_ A:24-33,49-61,94-109,111-120 2imj d2imjd1 D:34-43,57-73,102-117,119-133 2imj d2imjb1 B:34-43,57-73,102-117,119-133 2imj d2imjc1 C:34-43,57-73,102-117,119-133 2rcd d2rcdc1 C:30-39,55-67,102-113,114-126 1dmn d1dmna_ A:24-33,49-61,94-109,111-120 2rcd d2rcdd1 D:30-39,55-66,102-113,114-126 2rcd d2rcdb1 B:30-39,55-66,102-113,114-126 2z77 d2z77b1 B:24-33,56-69,102-117,119-128 1ea2 d1ea2a_ A:24-33,49-61,94-109,111-120 2rcd d2rcda1 A:30-39,55-66,102-113,114-126 2imj d2imja1 A:34-43,57-73,102-117,119-133 1u5o d1u5ob_ B:25-34,48-59,93-109,110-122 3ef8 d3ef8a1 A:27-36,51-60,104-119,120-136 2z77 d2z77c1 C:24-33,56-69,102-117,119-128 2z7a d2z7ab1 B:24-33,56-68,102-117,119-128 3ebt d3ebta1 A:19-28,50-65,95-110,111-120 2owp d2owpb1 B:27-36,52-63,98-109,113-126 3ef8 d3ef8b1 B:27-36,51-60,104-119,120-136 2owp d2owpa1 A:27-36,52-63,98-109,113-126 3cnx d3cnxc1 C:28-37,69-85,131-142,143-155 3cnx d3cnxb1 B:28-37,69-85,131-142,143-155 1w6y d1w6ya1 A:24-33,49-63,94-109,111-120 1w01 d1w01b_ B:224-233,249-264,294-309,311-320 1e3r d1e3ra_ A:24-33,49-64,94-109,111-120 2z7a d2z7aa1 A:24-33,56-71,102-117,119-128 3b8l d3b8lf1 F:27-36,53-68,103-119,122-133 1oh0 d1oh0a_ A:24-33,49-64,94-109,111-120 1zo2 d1zo2b1 B:28-37,51-63,97-112,114-125 3b8l d3b8lc1 C:27-36,53-68,103-119,122-133 3b8l d3b8ld1 D:27-36,53-68,103-119,122-133 3b8l d3b8lb1 B:27-36,53-68,103-119,122-133 1ohp d1ohpd1 D:222-231,247-262,290-305,307-316 1ohp d1ohpa1 A:22-31,47-62,90-105,107-116 3cnx d3cnxa1 A:28-37,69-85,127-142,143-155 2gxf d2gxfd1 D:20-29,44-56,98-110,112-123 3b8l d3b8la1 A:27-36,53-68,103-119,122-133 3b8l d3b8le1 E:27-36,53-68,103-119,122-133 1ohs d1ohsd1 D:222-231,247-262,290-305,307-316 2gxf d2gxfb1 B:20-29,44-56,98-110,112-123 1qjg d1qjgc_ C:22-31,47-62,90-105,107-116 1ohp d1ohpb1 B:222-231,247-262,290-305,307-316 1qjg d1qjgd_ D:22-31,47-62,90-105,107-116 1ogz d1ogza_ A:22-31,47-62,90-105,107-116 1s5a d1s5ab_ B:24-33,53-69,100-116,117-126 1ohp d1ohpc1 C:22-31,47-62,90-105,107-116 1ocv d1ocva_ A:22-31,47-62,90-105,107-116 1ohs d1ohsb1 B:222-231,247-262,290-305,307-316 1qjg d1qjga_ A:22-31,47-62,90-105,107-116 3d9r d3d9rd1 D:27-36,51-66,104-118,120-133 1qjg d1qjgf_ F:22-31,47-62,90-105,107-116 1ohs d1ohsc1 C:22-31,47-62,90-105,107-116 1ocv d1ocvb_ B:222-231,247-262,290-305,307-316 8cho d8choa_ A:22-31,47-62,90-105,107-116 1ohs d1ohsa1 A:22-31,47-62,90-105,107-116 1ocv d1ocvd_ D:622-631,647-662,690-705,707-716 1ocv d1ocvc_ C:422-431,447-462,490-505,507-516 3d9r d3d9rb1 B:27-36,51-67,104-118,120-133 1qjg d1qjgb_ B:22-31,47-62,90-105,107-116 1e3v d1e3va_ A:24-33,49-65,94-109,111-120 1oh0 d1oh0b_ B:224-233,249-264,294-309,311-320 3d9r d3d9ra1 A:27-36,51-66,100-118,120-133 3bb9 d3bb9b1 B:46-55,69-78,118-135,137-147 1qjg d1qjge_ E:22-31,47-62,90-105,107-116 1ogx d1ogxb_ B:224-233,249-265,294-309,311-320 3d9r d3d9rc1 C:27-36,51-67,100-118,120-133 3b7c d3b7ca1 A:21-30,46-59,94-109,110-121 2rgq d2rgqa1 A:26-35,49-66,99-114,115-127 2gxf d2gxfa1 A:20-29,44-58,98-110,112-123 2rgq d2rgqc1 C:26-35,49-66,99-114,115-127 2gxf d2gxfc1 C:20-29,44-58,98-110,112-123 2rgq d2rgqb1 B:26-35,49-66,99-114,115-127 2r4i d2r4ic1 C:22-31,45-56,95-108,109-121 1jkg d1jkga_ A:31-40,54-66,107-121,122-136 1jn5 d1jn5a_ A:31-40,54-66,106-121,122-136 2r4i d2r4ia1 A:22-31,45-56,95-108,109-121 3e99 d3e99a1 A:24-33,64-82,120-135,140-150 2chc d2chcb1 B:29-38,52-67,100-117,118-130 2f86 d2f86l1 L:368-377,394-403,442-459,460-471 2f86 d2f86f1 F:368-377,394-404,443-459,460-471 67. d.133.1 Molybdenum cofactor-binding domain duplication: consists of 4 structural repeats arranged in 2 lobes ! contains one left-hand beta-alpha-beta unit per lobe ! Molybdenum cofactor-binding domain beta(2)-alpha-beta-alpha-beta; 2 layers: a/b; mixed sheet: order 1243: crossing loops 1dgj d1dgja4 A:560-569,585-609,612-626,765-780 1rm6 d1rm6d2 D:383-392,409-423,434-446,620-635 1rm6 d1rm6a2 A:383-392,409-423,434-446,620-635 1sb3 d1sb3d2 D:383-392,409-423,434-446,620-635 1sb3 d1sb3a2 A:383-392,409-423,434-446,620-635 1sij d1sija4 A:558-567,583-593,610-624,765-780 1t3q d1t3qb2 B:396-405,425-438,453-467,636-651 1vlb d1vlba4 A:558-567,583-593,610-624,765-780 1jrp d1jrpf2 F:367-376,413-426,443-457,621-636 1t3q d1t3qe2 E:396-405,425-438,453-467,636-651 1jro d1jrod2 D:367-376,413-426,443-457,621-636 1jrp d1jrpb2 B:367-376,413-426,443-457,621-636 1jro d1jrof2 F:367-376,412-426,443-457,621-636 1ffu d1ffub2 B:410-419,439-452,470-485,649-665 1n62 d1n62e2 E:413-422,442-455,476-491,655-671 1jro d1jrob2 B:367-376,412-426,443-457,621-636 1jrp d1jrph2 H:367-376,413-426,443-457,621-636 1jrp d1jrpd2 D:367-376,413-426,443-457,621-636 1jro d1jroh2 H:367-376,412-426,443-457,621-636 1ffv d1ffvb2 B:410-419,439-452,470-485,649-665 1n62 d1n62b2 B:413-422,442-455,476-491,655-671 1n60 d1n60e2 E:413-422,442-455,476-491,655-671 1n61 d1n61e2 E:413-422,442-455,476-491,655-671 1n63 d1n63e2 E:413-422,442-455,476-491,655-671 1n60 d1n60b2 B:413-422,442-455,476-491,655-671 1vdv d1vdva5 A:937-946,962-976,993-1007,1152-1166 1fo4 d1fo4a5 A:937-946,962-976,993-1008,1150-1166 1n5w d1n5we2 E:413-422,442-455,476-491,655-671 1n63 d1n63b2 B:413-422,442-455,476-491,655-671 1ffv d1ffve2 E:410-419,439-452,470-485,649-665 1ffu d1ffue2 E:410-419,439-452,470-485,649-665 1n61 d1n61b2 B:413-422,442-455,476-491,655-671 1zxi d1zxib2 B:413-422,442-455,476-491,655-671 1n5w d1n5wb2 B:413-422,442-455,476-491,655-671 1vdv d1vdvb5 B:937-946,962-976,993-1007,1152-1167 1n5x d1n5xb5 B:937-946,962-976,993-1008,1150-1167 1n5x d1n5xa5 A:937-946,962-976,993-1008,1150-1167 1fo4 d1fo4b5 B:937-946,962-976,993-1008,1150-1167 3b9j d3b9jc2 C:937-946,962-976,993-1008,1150-1167 1v97 d1v97b5 B:937-946,962-976,993-1008,1150-1167 1vlb d1vlba4 A:558-567,592-607,610-624,765-780 1sij d1sija4 A:558-567,592-607,610-624,765-780 1fiq d1fiqc2 C:937-946,962-976,993-1008,1150-1167 1v97 d1v97a5 A:937-946,962-976,993-1008,1151-1167 1jrp d1jrpd2 D:367-376,426-442,443-457,621-636 1jro d1jrof2 F:367-376,426-442,443-457,621-636 1jrp d1jrpf2 F:367-376,426-442,443-457,621-636 1jrp d1jrph2 H:367-376,426-442,443-457,621-636 1jrp d1jrpb2 B:367-376,426-442,443-457,621-636 1jro d1jrod2 D:367-376,426-442,443-457,621-636 1jro d1jrob2 B:367-376,426-442,443-457,621-636 1jro d1jroh2 H:367-376,426-442,443-457,621-636 1vdv d1vdvb5 B:937-946,976-992,993-1007,1152-1167 1vdv d1vdva5 A:937-946,976-992,993-1007,1152-1166 1v97 d1v97b5 B:937-946,976-992,993-1008,1150-1167 1v97 d1v97a5 A:937-946,976-992,993-1008,1151-1167 1fo4 d1fo4b5 B:937-946,976-992,993-1008,1150-1167 1n5x d1n5xb5 B:937-946,976-992,993-1008,1150-1167 1n5x d1n5xa5 A:937-946,976-992,993-1008,1150-1167 3b9j d3b9jc2 C:937-946,976-992,993-1008,1150-1167 1fo4 d1fo4a5 A:937-946,976-992,993-1008,1150-1166 70. d.210.1 Argininosuccinate synthetase, C-terminal domain Argininosuccinate synthetase, C-terminal domain unusual fold 1kh3 d1kh3d2 D:234-250,273-290,333-343,344-353 1vl2 d1vl2d2 D:244-260,283-300,343-353,354-363 1kor d1kord2 D:234-250,273-290,333-343,344-353 1vl2 d1vl2b2 B:244-260,283-300,343-353,354-363 1vl2 d1vl2a2 A:244-260,283-300,343-353,354-363 1kh1 d1kh1a2 A:234-250,273-290,333-343,344-353 1kh3 d1kh3b2 B:234-250,273-290,333-343,344-353 1j21 d1j21d2 D:234-250,273-290,333-343,344-353 1vl2 d1vl2c2 C:244-260,283-300,343-353,354-363 1kor d1korb2 B:234-250,273-290,333-343,344-353 1j21 d1j21a2 A:234-250,273-290,333-343,344-353 1j21 d1j21b2 B:234-250,273-290,333-343,344-353 1kor d1kora2 A:234-250,273-290,333-343,344-353 1kh3 d1kh3a2 A:234-250,273-290,333-343,344-353 1j20 d1j20a2 A:234-250,273-290,333-343,344-353 1kh1 d1kh1d2 D:234-250,273-290,333-343,344-353 1kh2 d1kh2d2 D:234-250,273-290,333-343,344-353 1j21 d1j21c2 C:234-250,273-290,333-343,344-353 1kh2 d1kh2b2 B:234-250,273-290,333-343,344-353 1kh2 d1kh2c2 C:234-250,273-290,333-343,344-353 1kh2 d1kh2a2 A:234-250,273-290,333-343,344-353 1kh1 d1kh1c2 C:234-250,273-290,333-343,344-353 1kh1 d1kh1b2 B:234-250,273-290,333-343,344-353 1j1z d1j1zb2 B:234-250,273-290,331-343,344-353 1j1z d1j1za2 A:234-250,273-290,331-343,344-353 1j1z d1j1zd2 D:234-250,273-290,331-343,344-353 1j1z d1j1zc2 C:234-250,273-290,331-343,344-353 1j20 d1j20c2 C:234-250,273-290,331-343,344-353 1kor d1korc2 C:234-250,273-290,331-343,344-353 1j20 d1j20b2 B:234-250,273-290,331-343,344-353 1j20 d1j20d2 D:234-250,273-290,331-343,344-353 1kh3 d1kh3c2 C:234-250,273-290,331-343,344-353 72. e.2.1 Replication terminator protein (Tus) Replication terminator protein (Tus) contains a cluster of helices and a beta-sandwich 1ecr d1ecra_ A:182-197,204-223,227-235,303-309 2i06 d2i06a1 A:182-197,204-223,227-235,303-309 2i05 d2i05a1 A:182-197,204-223,227-235,303-309 78. a.102.2 Seven-hairpin glycosidases alpha/alpha toroid multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies 1hcu d1hcua_ A:174-193,194-211,225-229,230-234 1fo2 d1fo2a_ A:327-347,348-368,375-380,382-386 1fo3 d1fo3a_ A:327-347,348-368,375-380,382-386 1fmi d1fmia_ A:327-347,348-368,375-380,382-386 1kre d1kreb_ B:195-214,215-232,246-250,253-257 1kkt d1kktb_ B:195-214,215-232,246-250,253-257 1krf d1krfb_ B:195-214,215-232,246-250,253-257 2ri9 d2ri9a1 A:1195-1214,1215-1232,1246-1250,1253-1257 1kre d1krea_ A:195-214,215-232,246-251,252-257 1kkt d1kkta_ A:195-214,215-232,246-251,252-257 1krf d1krfa_ A:195-214,215-232,246-251,252-257 2ri8 d2ri8b1 B:2195-2214,2215-2232,2246-2250,2253-2257 1hcu d1hcub_ B:174-193,194-211,224-229,230-235 1g6i d1g6ia_ A:204-223,224-243,254-259,260-264 2ri9 d2ri9b1 B:2195-2214,2215-2232,2246-2251,2252-2257 1hcu d1hcud_ D:174-193,194-211,224-229,230-235 1dl2 d1dl2a_ A:204-223,224-243,254-259,260-264 1hcu d1hcuc_ C:174-193,194-211,224-229,230-235 2ri8 d2ri8a1 A:1195-1214,1215-1232,1246-1251,1252-1257 1fo3 d1fo3a_ A:394-413,414-431,441-446,447-452 1fmi d1fmia_ A:394-413,414-431,441-446,447-452 1fo2 d1fo2a_ A:394-413,414-431,441-446,447-452 1hcu d1hcuc_ C:97-121,126-150,158-162,164-168 1g6i d1g6ia_ A:336-352,366-393,399-404,420-424 1dl2 d1dl2a_ A:336-352,366-393,399-404,420-424 1hcu d1hcub_ B:97-121,126-150,158-162,164-168 1g6i d1g6ia_ A:129-152,155-178,184-189,191-195 1dl2 d1dl2a_ A:129-152,155-178,184-189,191-195 1hcu d1hcua_ A:97-121,126-150,158-162,164-168 1hcu d1hcud_ D:97-121,126-150,158-162,164-168 2ri9 d2ri9b1 B:2328-2346,2347-2369,2375-2379,2397-2401 1kre d1kreb_ B:328-346,347-369,375-379,397-401 1kkt d1kktb_ B:328-346,347-369,375-379,397-401 1krf d1krfa_ A:328-346,347-369,375-379,397-401 1krf d1krfb_ B:328-346,347-369,375-379,397-401 1kkt d1kkta_ A:328-346,347-369,375-379,397-401 1nxc d1nxca_ A:280-299,300-320,327-332,333-338 1hcu d1hcuc_ C:306-324,325-346,353-357,381-385 1kre d1krea_ A:328-346,347-369,375-379,397-401 2ri8 d2ri8b1 B:2328-2346,2347-2369,2375-2379,2397-2401 1hcu d1hcud_ D:306-324,325-347,353-357,381-385 2ri8 d2ri8a1 A:1328-1346,1347-1369,1375-1379,1397-1401 1hcu d1hcub_ B:306-324,325-346,353-357,381-385 1hcu d1hcua_ A:306-324,325-346,353-357,381-385 2ri9 d2ri9a1 A:1328-1346,1347-1369,1375-1379,1397-1401 87. d.29.1 Ribosomal protein L31e Ribosomal protein L31e beta-alpha-beta-(alpha)-beta(2); 2 layers: alpha/beta; mixed beta-sheet, order: 1342 1vq5 d1vq5x1 X:24-42,51-60,68-79,80-88 1q81 d1q81y_ Y:24-42,51-60,68-79,80-88 1vqm d1vqmx1 X:24-42,51-62,68-79,80-88 1vqp d1vqpx1 X:24-42,51-62,68-79,80-88 2otl d2otlx1 X:24-42,51-62,68-79,80-88 2otj d2otjx1 X:24-42,51-62,68-79,80-88 1vq8 d1vq8x1 X:24-42,51-62,68-79,80-88 1vq4 d1vq4x1 X:24-42,51-62,68-79,80-88 1vqk d1vqkx1 X:24-42,51-62,68-79,80-88 1vqn d1vqnx1 X:24-42,51-62,68-79,80-88 1vql d1vqlx1 X:24-42,51-62,68-79,80-88 1yit d1yitx1 X:24-42,51-62,68-79,80-88 1vq6 d1vq6x1 X:24-42,51-62,68-79,80-88 1vq9 d1vq9x1 X:24-42,51-62,68-79,80-88 1s72 d1s72x_ X:24-42,51-62,68-79,80-88 1ffk d1ffku_ U:24-42,51-62,68-79,80-88 1jj2 d1jj2w_ W:24-42,51-62,68-79,80-88 1vq7 d1vq7x1 X:24-42,51-62,68-79,80-88 1kqs d1kqsw_ W:24-42,51-62,68-79,80-88 1m90 d1m90y_ Y:24-42,51-62,68-79,80-88 1yhq d1yhqx1 X:24-42,51-62,68-79,80-88 1vqo d1vqox1 X:24-42,51-62,68-79,80-88 1k73 d1k73y_ Y:24-42,51-62,68-79,80-88 1k9m d1k9my_ Y:24-42,51-62,68-79,80-88 1yij d1yijx1 X:24-42,51-62,68-79,80-88 1kc8 d1kc8y_ Y:24-42,51-62,68-79,80-88 1kd1 d1kd1y_ Y:24-42,51-62,68-79,80-88 1yi2 d1yi2x1 X:24-42,51-62,68-79,80-88 1qvf d1qvfw_ W:24-42,51-62,68-79,80-88 1n8r d1n8ry_ Y:24-42,51-62,68-79,80-88 1q82 d1q82y_ Y:24-42,51-62,68-79,80-88 1nji d1njiy_ Y:24-42,51-62,68-79,80-88 1k8a d1k8ay_ Y:24-42,51-62,68-79,80-88 1yjw d1yjwx1 X:24-42,51-62,68-79,80-88 1m1k d1m1ky_ Y:24-42,51-62,68-79,80-88 1q86 d1q86y_ Y:24-42,51-62,68-79,80-88 1q7y d1q7yy_ Y:24-42,51-62,68-79,80-88 1qvg d1qvgw_ W:24-42,51-62,68-79,80-88 1yjn d1yjnx1 X:24-42,51-62,68-79,80-88 88. d.91.1 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 alpha-beta-alpha(2)-beta(3)-alpha; 3 layers a/b/a; antiparallel beta-sheet: 4123 1dt9 d1dt9a3 A:44-63,64-86,91-103,105-115 91. e.17.1 D-aminoacid aminotransferase-like PLP-dependent enzymes D-aminoacid aminotransferase-like PLP-dependent enzymes 2 domains: (1) alpha+beta: beta3-alpha2-beta2; (2) alpha/beta, a part of its mixed sheet forms barrel: n=6, S=8 1i2l d1i2la_ A:38-54,59-75,75-89,99-108 1i1k d1i1ka_ A:52-68,74-90,93-102,117-126 1iyd d1iydb_ B:52-68,74-90,92-102,117-125 1i1k d1i1kb_ B:552-568,574-590,593-602,617-626 1i1k d1i1kc_ C:1052-1068,1074-1090,1093-1102,1117-1126 1a3g d1a3gb_ B:52-68,74-90,93-102,117-126 1a3g d1a3gc_ C:52-68,74-90,93-102,117-126 1iyd d1iydc_ C:52-68,74-90,92-102,117-125 1i1l d1i1lc_ C:1052-1068,1074-1090,1092-1102,1117-1125 1iye d1iyeb_ B:52-68,74-90,93-102,117-125 1et0 d1et0a_ A:52-68,74-90,90-106,116-125 1a3g d1a3ga_ A:52-68,74-90,93-102,117-126 1i1l d1i1lb_ B:552-568,574-590,592-602,617-625 1i1m d1i1ma_ A:52-68,74-90,92-102,117-125 1iyd d1iyda_ A:52-68,74-90,92-102,117-125 1i1m d1i1mb_ B:552-568,574-590,592-602,617-625 1i1l d1i1la_ A:52-68,74-90,92-102,117-125 1i1m d1i1mc_ C:1052-1068,1074-1090,1092-1102,1117-1125 1iye d1iyea_ A:52-68,74-90,92-102,117-125 1a0g d1a0gb_ B:43-59,65-81,83-94,108-118 1a0g d1a0ga_ A:43-59,65-81,83-94,108-118 1iye d1iyec_ C:52-68,74-90,92-102,117-125 2dab d2dabb_ B:43-59,65-81,83-94,108-118 1daa d1daaa_ A:43-59,65-81,83-94,108-118 3daa d3daab_ B:43-59,65-81,83-94,108-119 4daa d4daaa_ A:43-59,65-81,83-94,108-119 1g2w d1g2wb_ B:43-59,65-81,83-94,108-119 4daa d4daab_ B:43-59,65-81,83-94,108-119 1g2w d1g2wa_ A:43-59,65-81,83-94,108-119 3daa d3daaa_ A:43-59,65-81,83-94,108-119 2dab d2daba_ A:43-59,65-81,83-94,108-119 2daa d2daab_ B:43-59,65-81,83-94,108-119 1daa d1daab_ B:43-59,65-81,83-94,108-119 2daa d2daaa_ A:43-59,65-81,83-94,108-119 5daa d5daab_ B:43-59,65-81,83-96,108-118 1i2k d1i2ka_ A:38-54,59-75,75-89,96-108 5daa d5daaa_ A:43-59,65-81,83-96,108-118 2hhf d2hhfa1 A:92-108,113-129,137-149,159-172 1ekv d1ekva_ A:92-108,113-129,137-149,159-172 1ekf d1ekfa_ A:92-108,113-129,137-150,159-172 1ekp d1ekpa_ A:92-108,113-129,137-150,159-172 1ekf d1ekfb_ B:92-108,113-129,137-150,159-172 2a1h d2a1hb1 B:92-108,113-129,137-150,159-172 1ekp d1ekpb_ B:92-108,113-129,137-150,159-172 1kt8 d1kt8a_ A:92-108,113-129,137-150,159-172 2a1h d2a1ha1 A:92-108,113-129,137-150,159-172 1kta d1ktaa_ A:92-108,113-129,137-150,159-172 1ekv d1ekvb_ B:92-108,113-129,137-150,159-172 1kta d1ktab_ B:592-608,613-629,637-650,659-672 2hhf d2hhfb1 B:592-608,613-629,637-650,659-672 1kt8 d1kt8b_ B:592-608,613-629,637-650,659-672 95. d.67.2 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain RRF/tRNA synthetase additional domain-like core: alpha-beta(2)-alpha-beta(2); 2 layers: alpha/beta 1f7v d1f7va3 A:30-48,50-59,99-107,108-115 1f7u d1f7ua3 A:30-48,50-59,99-107,108-115 1bs2 d1bs2a3 A:30-48,50-59,99-107,108-115 96. e.50.1 AF1104-like AF1104-like 2 domains; d1: [all-alpha; 3-helical bundle, similar to the immunoglobulin/albumin-binding domain-like fold (scop_cf 46996)]; d2: [alpha/beta; 3 layers, a/b/a; 6-stranded mixed beta-sheet, order: 321456, strand 6 is antiparallel to the rest] 2ffj d2ffja1 A:98-110,122-138,259-267,280-288 2g8l d2g8lb1 B:96-110,117-132,255-263,276-283 2ffj d2ffjb1 B:98-113,122-138,259-267,280-288 2g8l d2g8la1 A:96-110,117-132,255-263,276-283 2g8l d2g8la1 A:96-110,137-148,255-263,276-283 103. g.90.1 E6 C-terminal domain-like E6 C-terminal domain-like alpha+beta zinc-binding fold with topological similarity to the fold of lambda cro protein 2fk4 d2fk4a1 A:8-16,34-44,47-52,53-57 116. d.259.1 Hypothetical protein HI1480 Hypothetical protein HI1480 beta-alpha(4)-beta-alpha-beta; segregated alpha-helical and beta-sheet subdomains; dimeric beta-sheet barrel: n=6, S=10 1mw5 d1mw5b_ B:19-38,99-113,121-129,143-153 1mw5 d1mw5a_ A:19-38,99-113,121-129,143-153 120. c.52.4 TBP-interacting protein-like contains extra C-terminal alpha+beta domain of complex fold with an embeded C2H2 zinc-finger Restriction endonuclease-like core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest 2czr d2czra1 A:85-101,123-134,140-150,180-187 121. e.58.1 Viral ssDNA binding protein Viral ssDNA binding protein 2 domains; d1: [large alpha+beta domain subdivided into the 'head', 'neck' and 'shoulders' regions; in the 'neck', there is an OB-fold interrupted by large insertions]; d2: [all-alpha, 6 helices; orthogonal array] 1urj d1urja_ A:666-694,702-719,975-988,998-1004 1urj d1urjb_ B:666-694,702-719,975-988,998-1004