1. a.296.1 PMT central region-like PMT central region-like multihelical; comprises two four-helical bundles of different topologies and an irregular helical array packed against a small beta-sheet 2ec5 d2ec5a1 A:673-684,688-704,708-720,851-873 2ec5 d2ec5b1 B:673-684,688-704,708-720,851-873 2ebf d2ebfx1 X:673-684,688-704,708-720,850-873 2ebh d2ebhx1 X:673-684,688-704,708-720,850-873 2ebh d2ebhx1 X:651-670,673-684,688-704,708-720 2ec5 d2ec5b1 B:651-670,673-684,688-704,708-720 2ebf d2ebfx1 X:651-670,673-684,688-704,708-720 2ec5 d2ec5a1 A:651-670,673-684,688-704,708-720 2. a.263.1 DNA terminal protein DNA terminal protein multihelical, open array; contains the C-terminal four-helical bundle, left-handed superhelix 2ex3 d2ex3h1 H:173-195,197-211,215-226,236-257 2ex3 d2ex3b1 B:173-195,197-211,215-226,236-257 2ex3 d2ex3l1 L:173-195,197-211,215-226,236-257 2ex3 d2ex3j1 J:173-195,197-211,215-226,236-257 2ex3 d2ex3f1 F:173-195,197-211,215-226,236-257 2ex3 d2ex3d1 D:173-195,197-211,215-226,236-257 3. a.211.1 HD-domain/PDEase-like HD-domain/PDEase-like multihelical; consists of two different alpha-helical bundles 3b2r d3b2ra1 A:567-583,591-606,614-633,639-655 2yy2 d2yy2a1 A:207-223,231-247,253-272,278-294 3dyl d3dyla1 A:207-223,231-247,253-272,278-294 1ptw d1ptwb_ B:116-130,138-154,161-178,186-202 2yy2 d2yy2b1 B:207-223,231-247,253-272,278-294 2h44 d2h44a1 A:567-583,591-607,614-633,639-655 2h42 d2h42c1 C:567-583,591-607,614-633,639-655 3dyq d3dyqa1 A:207-223,231-247,253-272,278-294 1zkn d1zknb1 B:116-130,138-154,161-178,186-202 1rkp d1rkpa_ A:567-583,591-607,614-633,639-655 1q9m d1q9mb_ B:116-130,138-154,161-178,186-202 2fm5 d2fm5b1 B:116-130,138-154,161-178,186-202 1oyn d1oync_ C:116-130,138-154,161-178,186-202 1oyn d1oyna_ A:116-130,138-154,161-178,186-202 1oyn d1oynd_ D:116-130,138-154,161-178,186-202 1zkn d1zknd1 D:116-130,138-154,161-178,186-202 2fm5 d2fm5d1 D:116-130,138-154,161-178,186-202 1t9s d1t9sa_ A:567-583,591-607,614-633,639-655 2fm0 d2fm0b1 B:116-130,138-154,161-178,186-202 1tbf d1tbfa_ A:567-583,591-607,614-633,639-655 1zkn d1zkna1 A:116-130,138-154,161-178,186-202 3dyq d3dyqb1 B:207-223,231-247,253-272,278-294 3dyl d3dylb1 B:207-223,231-247,253-272,278-294 2hd1 d2hd1b1 B:207-223,231-247,253-272,278-294 2fm0 d2fm0d1 D:116-130,138-154,161-178,186-202 3dyn d3dyna1 A:207-223,231-247,253-272,278-294 1q9m d1q9mc_ C:116-130,138-154,161-178,186-202 1xom d1xoma_ A:116-130,138-154,161-178,186-202 2fm5 d2fm5a1 A:116-130,138-154,161-178,186-202 1ptw d1ptwa_ A:116-130,138-154,161-178,186-202 3dy8 d3dy8a1 A:207-223,231-247,253-272,278-294 1oyn d1oynb_ B:116-130,138-154,161-178,186-202 3dy8 d3dy8b1 B:207-223,231-247,253-272,278-294 3b2r d3b2rb1 B:567-583,591-607,614-633,639-655 1uho d1uhoa_ A:567-583,591-607,614-633,639-655 2hd1 d2hd1a1 A:207-223,231-247,253-272,278-294 3dyn d3dynb1 B:207-223,231-247,253-272,278-294 2h40 d2h40a1 A:567-583,591-607,614-633,639-655 1q9m d1q9md_ D:116-130,138-154,161-178,186-202 1xoq d1xoqa_ A:116-130,138-154,161-178,186-202 2fm0 d2fm0a1 A:116-130,138-154,161-178,186-202 1ptw d1ptwd_ D:116-130,138-154,161-178,186-202 1q9m d1q9ma_ A:116-130,138-154,161-178,186-202 1t9s d1t9sb_ B:567-583,591-607,614-633,639-655 1zkn d1zknc1 C:116-130,138-154,161-178,186-202 1y2c d1y2ca1 A:116-130,138-154,161-178,186-202 3dys d3dysa1 A:207-223,231-247,253-272,278-294 1tb7 d1tb7b_ B:116-130,138-154,161-178,186-202 1ptw d1ptwc_ C:116-130,138-154,161-178,186-202 1xoz d1xoza_ A:567-583,591-607,614-633,639-655 2fm0 d2fm0c1 C:116-130,138-154,161-178,186-202 1tbb d1tbbb_ B:116-130,138-154,161-178,186-202 1xp0 d1xp0a_ A:567-583,591-607,614-633,639-655 1udt d1udta_ A:567-583,591-607,614-633,639-655 2h42 d2h42a1 A:567-583,591-607,614-633,639-655 1y2e d1y2ea1 A:116-130,138-154,161-178,186-202 1xon d1xonb_ B:116-130,138-154,161-178,186-202 1y2b d1y2ba1 A:116-130,138-154,161-178,186-202 2fm5 d2fm5c1 C:116-130,138-154,161-178,186-202 2chm d2chma1 A:567-583,591-607,614-633,639-655 1xor d1xorb_ B:116-130,138-154,161-178,186-202 2h42 d2h42b1 B:567-583,591-607,614-633,639-655 1so2 d1so2d_ D:694-708,716-732,738-755,807-823 1y2d d1y2da1 A:116-130,138-154,161-178,186-202 3dys d3dysb1 B:207-223,231-247,253-272,278-294 1so2 d1so2a_ A:694-708,716-732,738-755,807-823 1y2k d1y2ka1 A:116-130,138-154,161-178,186-202 1y2e d1y2eb1 B:116-130,138-154,161-178,186-202 1xoq d1xoqb_ B:116-130,138-154,161-178,186-202 1xom d1xomb_ B:116-130,138-154,161-178,186-202 2qyn d2qyna1 A:116-130,138-154,161-178,186-202 1y2d d1y2db1 B:116-130,138-154,161-178,186-202 1soj d1sojk_ K:694-708,716-732,738-755,807-823 1y2k d1y2kb1 B:116-130,138-154,161-178,186-202 1soj d1soji_ I:694-708,716-732,738-755,807-823 1xon d1xona_ A:116-130,138-154,161-178,186-202 1y2c d1y2cb1 B:116-130,138-154,161-178,186-202 1soj d1soje_ E:694-708,716-732,738-755,807-823 1soj d1sojg_ G:694-708,716-732,738-755,807-823 1soj d1soja_ A:694-708,716-732,738-755,807-823 1y2b d1y2bb1 B:116-130,138-154,161-178,186-202 1soj d1sojc_ C:694-708,716-732,738-755,807-823 1tb7 d1tb7a_ A:116-130,138-154,161-178,186-202 1xor d1xora_ A:116-130,138-154,161-178,186-202 1tbb d1tbba_ A:116-130,138-154,161-178,186-202 3bjc d3bjca1 A:567-583,591-607,614-633,639-655 1f0j d1f0jb_ B:190-204,212-228,235-252,260-276 1so2 d1so2b_ B:694-708,716-732,738-755,807-823 1ro9 d1ro9b_ B:190-204,212-228,235-252,260-276 1so2 d1so2c_ C:694-708,716-732,738-755,807-823 1soj d1sojf_ F:694-708,716-732,738-755,807-823 1mkd d1mkdk_ K:213-227,235-251,258-275,283-299 1f0j d1f0ja_ A:190-204,212-228,235-252,260-276 1mkd d1mkde_ E:213-227,235-251,258-275,283-299 1soj d1sojh_ H:694-708,716-732,738-755,807-823 1mkd d1mkdj_ J:213-227,235-251,258-275,283-299 1mkd d1mkdf_ F:213-227,235-251,258-275,283-299 1soj d1sojd_ D:694-708,716-732,738-755,807-823 1soj d1sojb_ B:694-708,716-732,738-755,807-823 1mkd d1mkda_ A:213-227,235-251,258-275,283-299 1mkd d1mkdh_ H:213-227,235-251,258-275,283-299 1mkd d1mkdl_ L:213-227,235-251,258-275,283-299 1mkd d1mkdb_ B:213-227,235-251,258-275,283-299 1soj d1sojl_ L:694-708,716-732,738-755,807-823 1xmu d1xmua_ A:190-204,212-228,235-252,260-276 1mkd d1mkdc_ C:213-227,235-251,258-275,283-299 1soj d1sojj_ J:694-708,716-732,738-755,807-823 1mkd d1mkdd_ D:213-227,235-251,258-275,283-299 1mkd d1mkdg_ G:213-227,235-251,258-275,283-299 1mkd d1mkdi_ I:213-227,235-251,258-275,283-299 1ro6 d1ro6b_ B:190-204,212-228,235-252,260-276 1ror d1rorb_ B:190-204,212-228,235-252,260-276 1ro9 d1ro9a_ A:190-204,212-228,235-252,260-276 2qyn d2qynb1 B:116-130,138-154,161-178,186-202 1ror d1rora_ A:190-204,212-228,235-252,260-276 1ro6 d1ro6a_ A:190-204,212-228,235-252,260-276 1y2j d1y2jb1 B:190-204,212-228,235-252,260-276 1y2j d1y2ja1 A:190-204,212-228,235-252,260-276 2qyl d2qyla1 A:190-204,212-228,235-252,260-276 1xot d1xotb_ B:190-204,212-228,235-252,260-276 1xm4 d1xm4b_ B:190-204,212-228,235-252,260-276 1xm6 d1xm6a_ A:190-204,212-228,235-252,260-276 1y2h d1y2ha1 A:190-204,212-228,235-252,260-276 1xlx d1xlxa_ A:190-204,212-228,235-252,260-276 1xlz d1xlza_ A:190-204,212-228,235-252,260-276 1y2h d1y2hb1 B:190-204,212-228,235-252,260-276 1tb5 d1tb5a_ A:190-204,212-228,235-252,260-276 1xm4 d1xm4a_ A:190-204,212-228,235-252,260-276 1xlz d1xlzb_ B:190-204,212-228,235-252,260-276 1xm6 d1xm6b_ B:190-204,212-228,235-252,260-276 1xmu d1xmub_ B:190-204,212-228,235-252,260-276 1xot d1xota_ A:190-204,212-228,235-252,260-276 1xn0 d1xn0a_ A:190-204,212-228,235-252,260-276 1tb5 d1tb5b_ B:190-204,212-228,235-252,260-276 1xlx d1xlxb_ B:190-204,212-228,235-252,260-276 1xn0 d1xn0b_ B:190-204,212-228,235-252,260-276 1xmy d1xmya_ A:190-204,212-228,235-252,260-276 1xmy d1xmyb_ B:190-204,212-228,235-252,260-276 1taz d1taza_ A:178-192,200-219,224-243,249-265 1xos d1xosa_ A:190-204,212-228,235-252,260-276 1udu d1udub_ B:567-583,591-607,614-633,639-653 1udu d1udua_ A:567-583,591-607,614-633,639-653 1vj7 d1vj7a1 A:8-20,21-40,49-65,67-83 1t9r d1t9ra_ A:567-583,591-609,614-633,639-653 1vj7 d1vj7b1 B:8-21,21-40,49-65,67-77 2o6i d2o6ib1 B:62-86,181-196,203-211,224-245 2o6i d2o6ia1 A:62-86,181-196,203-211,224-245 2hek d2heka1 A:50-70,159-174,181-189,199-223 2hek d2hekb1 B:50-70,159-174,181-189,199-223 7. g.45.1 ArfGap/RecO-like zinc finger ArfGap/RecO-like zinc finger zinc-bound alpha+beta motif 1u5k d1u5ka2 A:85-104,109-126,128-144,197-205 1u5k d1u5kb2 B:85-104,109-126,128-145,197-205 9. a.98.1 R1 subunit of ribonucleotide reductase, N-terminal domain R1 subunit of ribonucleotide reductase, N-terminal domain multihelical consists of two all-alpha subdomains ! subdomain 1 (residues 10-100) is a 4-helical bundle 1pem d1pema1 A:81-96,125-139,141-155,430-449 1peq d1peqa1 A:81-96,125-139,141-155,430-449 2bq1 d2bq1f1 F:81-96,125-139,141-155,430-449 1peu d1peua1 A:81-96,125-139,141-155,430-450 1peo d1peoa1 A:81-96,125-139,141-155,430-450 2bq1 d2bq1e1 E:81-96,125-139,141-155,430-450 1r1r d1r1rc1 C:124-136,168-184,185-203,474-496 1r1r d1r1ra1 A:124-136,168-184,185-203,474-496 1r1r d1r1rb1 B:124-136,168-184,185-203,474-496 4r1r d4r1rb1 B:124-136,168-184,185-203,474-496 4r1r d4r1ra1 A:124-136,168-184,185-203,474-496 4r1r d4r1rc1 C:124-136,168-184,185-203,474-496 1rlr d1rlra1 A:124-135,168-184,185-203,474-496 5r1r d5r1ra1 A:116-124,124-136,168-184,185-203 2r1r d2r1ra1 A:116-124,124-136,168-184,185-203 2r1r d2r1rb1 B:116-124,124-136,168-184,185-203 2r1r d2r1rc1 C:116-124,124-136,168-184,185-203 5r1r d5r1rc1 C:116-124,124-136,168-184,185-203 4r1r d4r1ra1 A:116-124,124-136,168-184,185-203 4r1r d4r1rb1 B:116-124,124-136,168-184,185-203 4r1r d4r1rc1 C:116-124,124-136,168-184,185-203 5r1r d5r1rb1 B:116-124,124-136,168-184,185-203 1r1r d1r1ra1 A:116-124,124-136,168-184,185-203 1r1r d1r1rc1 C:116-124,124-136,168-184,185-203 1r1r d1r1rb1 B:116-124,124-136,168-184,185-203 6r1r d6r1rb1 B:116-124,124-136,168-184,185-203 6r1r d6r1rc1 C:116-124,124-136,168-184,185-203 6r1r d6r1ra1 A:124-136,168-182,185-203,474-497 3r1r d3r1rb1 B:116-124,124-136,168-184,185-203 3r1r d3r1rc1 C:116-124,124-136,168-184,185-203 3r1r d3r1ra1 A:116-124,124-136,168-184,185-203 7r1r d7r1rc1 C:116-124,124-136,168-184,185-203 7r1r d7r1ra1 A:116-124,124-136,168-184,185-203 7r1r d7r1rb1 B:116-124,124-136,168-184,185-203 2bq1 d2bq1f1 F:73-81,81-96,125-139,141-155 1rlr d1rlra1 A:116-124,124-135,168-184,185-203 3r1r d3r1ra1 A:124-136,168-184,185-203,474-497 3r1r d3r1rb1 B:124-136,168-184,185-203,474-497 3r1r d3r1rc1 C:124-136,168-184,185-203,474-497 5r1r d5r1rb1 B:124-136,168-184,185-203,474-497 5r1r d5r1ra1 A:124-136,168-184,185-203,474-497 2r1r d2r1rc1 C:124-136,168-184,185-203,474-497 7r1r d7r1ra1 A:124-136,168-184,185-203,474-497 2r1r d2r1rb1 B:124-136,168-184,185-203,474-497 2r1r d2r1ra1 A:124-136,168-184,185-203,474-497 7r1r d7r1rb1 B:124-136,168-184,185-203,474-497 7r1r d7r1rc1 C:124-136,168-184,185-203,474-497 5r1r d5r1rc1 C:124-136,168-184,185-203,474-497 1peu d1peua1 A:73-81,81-96,125-139,141-155 6r1r d6r1rc1 C:124-136,168-184,185-203,474-497 6r1r d6r1rb1 B:124-136,168-184,185-203,474-497 1peo d1peoa1 A:73-81,81-96,125-139,141-155 1pem d1pema1 A:73-81,81-96,125-139,141-155 2bq1 d2bq1e1 E:73-81,81-96,125-139,141-155 1peq d1peqa1 A:73-81,81-96,125-139,141-155 6r1r d6r1ra1 A:116-124,124-136,168-182,185-203 2r1r d2r1rc1 C:101-113,124-136,168-184,185-203 2r1r d2r1rb1 B:101-113,124-136,168-184,185-203 2r1r d2r1ra1 A:101-113,124-136,168-184,185-203 4r1r d4r1ra1 A:101-113,124-136,168-184,185-203 5r1r d5r1ra1 A:101-113,124-136,168-184,185-203 4r1r d4r1rc1 C:101-113,124-136,168-184,185-203 4r1r d4r1rb1 B:101-113,124-136,168-184,185-203 3r1r d3r1rb1 B:101-113,124-136,168-184,185-203 3r1r d3r1ra1 A:101-113,124-136,168-184,185-203 3r1r d3r1rc1 C:101-113,124-136,168-184,185-203 5r1r d5r1rb1 B:101-113,124-136,168-184,185-203 1r1r d1r1rc1 C:101-113,124-136,168-184,185-203 1r1r d1r1ra1 A:101-113,124-136,168-184,185-203 1r1r d1r1rb1 B:101-113,124-136,168-184,185-203 5r1r d5r1rc1 C:101-113,124-136,168-184,185-203 6r1r d6r1ra1 A:101-113,124-136,168-182,185-203 7r1r d7r1ra1 A:101-113,124-136,168-184,185-203 7r1r d7r1rc1 C:101-113,124-136,168-184,185-203 7r1r d7r1rb1 B:101-113,124-136,168-184,185-203 6r1r d6r1rc1 C:101-113,124-136,168-184,185-203 6r1r d6r1rb1 B:101-113,124-136,168-184,185-203 1rlr d1rlra1 A:101-113,124-135,168-184,185-203 2bq1 d2bq1e1 E:58-70,81-96,125-139,141-155 1pem d1pema1 A:58-70,81-96,125-139,141-155 1peq d1peqa1 A:58-70,81-96,125-139,141-155 1peo d1peoa1 A:58-70,81-96,125-139,141-155 13. d.381.1 ATP12-like ATP12-like contains an N-terminal beta-sheet that forms a beta-triangle structure; the remainder is a multihelical array of long and short helices 2r6i d2r6ib1 B:107-122,169-184,185-200,201-211 2r6i d2r6ia1 A:107-122,169-184,185-200,201-211 2r31 d2r31a1 A:85-100,147-162,162-177,178-188 2zd2 d2zd2b1 B:2085-2100,2147-2162,2162-2177,2178-2188 2zd2 d2zd2a1 A:1085-1100,1147-1161,1162-1177,1178-1188 2p4x d2p4xa1 A:85-100,147-161,162-177,178-188 2p4x d2p4xb1 B:85-100,147-161,162-177,178-188 2r31 d2r31a1 A:147-162,162-177,178-188,191-201 2zd2 d2zd2b1 B:2147-2162,2162-2177,2178-2188,2191-2201 2zd2 d2zd2a1 A:1147-1161,1162-1177,1178-1188,1191-1201 2p4x d2p4xa1 A:147-161,162-177,178-188,191-201 2p4x d2p4xb1 B:147-161,162-177,178-188,191-201 14. a.78.1 GntR ligand-binding domain-like GntR ligand-binding domain-like core: 6 helices: closed bundle; greek-key; internal pseudo twofold symmetry 2hs5 d2hs5a2 A:140-160,161-183,184-206,207-230 1h9g d1h9ga2 A:137-157,168-183,182-203,204-227 1e2x d1e2xa2 A:137-157,168-183,182-203,204-227 1hw2 d1hw2a2 A:137-157,168-183,182-203,204-228 1hw2 d1hw2b2 B:137-157,168-183,182-203,204-228 1hw1 d1hw1a2 A:137-157,168-183,182-203,204-230 1hw1 d1hw1b2 B:137-157,168-183,182-203,204-230 1h9t d1h9ta2 A:137-157,168-183,182-203,204-230 1h9t d1h9tb2 B:137-157,168-183,182-203,204-230 15. a.69.3 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain Left-handed superhelix core: 4-5 helices; bundle; left-handed superhelix 1t1r d1t1rb1 B:314-327,327-348,351-367,373-397 1t1s d1t1sb1 B:314-327,327-348,351-367,373-397 1jvs d1jvsb1 B:314-327,327-348,351-367,373-397 2egh d2eghb1 B:314-327,327-348,351-367,373-397 1k5h d1k5ha1 A:315-328,328-349,352-368,374-398 1onp d1onpb1 B:315-328,328-349,352-368,374-397 1ono d1onoa1 A:315-328,328-349,352-368,374-397 1ono d1onob1 B:315-328,328-349,352-368,374-397 1onp d1onpa1 A:315-328,328-349,352-368,374-397 1onn d1onna1 A:315-328,328-349,352-368,374-397 1q0q d1q0qa1 A:315-328,328-349,352-368,374-397 1onn d1onnb1 B:315-328,328-349,352-368,374-397 1q0q d1q0qb1 B:315-328,328-349,352-368,374-397 1q0l d1q0la1 A:315-328,328-349,352-368,374-397 1k5h d1k5hc1 C:315-328,328-349,352-367,374-397 1q0h d1q0ha1 A:315-328,328-349,352-368,374-397 1t1s d1t1sa1 A:314-327,327-348,351-366,373-397 1t1r d1t1ra1 A:314-327,327-348,351-366,373-397 1jvs d1jvsa1 A:314-327,327-348,351-366,373-399 2egh d2egha1 A:314-327,327-348,351-366,373-398 1r0l d1r0ld1 D:305-318,318-339,342-358,364-386 1r0l d1r0lb1 B:305-318,318-339,342-358,364-386 1r0l d1r0lc1 C:305-318,318-339,342-358,364-386 1r0l d1r0la1 A:305-318,318-339,342-358,364-386 1k5h d1k5hb1 B:315-328,328-349,352-367,374-396 1r0k d1r0kb1 B:305-318,318-339,342-358,364-386 1r0k d1r0ka1 A:305-318,318-339,342-358,364-386 1r0k d1r0kc1 C:305-318,318-339,342-358,364-386 1r0k d1r0kd1 D:305-318,318-339,342-358,364-385 1onn d1onna1 A:225-240,328-349,352-368,374-397 1onp d1onpb1 B:225-240,328-349,352-368,374-397 1onn d1onnb1 B:225-240,328-349,352-368,374-397 2egh d2eghb1 B:224-239,327-348,351-367,373-397 1r0l d1r0ld1 D:215-230,318-339,342-358,364-386 1r0k d1r0kb1 B:215-230,318-339,342-358,364-386 1r0l d1r0lb1 B:215-230,318-339,342-358,364-386 1r0l d1r0la1 A:215-230,318-339,342-358,364-386 1r0l d1r0lc1 C:215-230,318-339,342-358,364-386 1r0k d1r0kd1 D:215-230,318-339,342-358,364-385 1r0k d1r0kc1 C:215-230,318-339,342-358,364-386 1k5h d1k5hc1 C:225-240,328-349,352-367,374-397 1r0k d1r0ka1 A:215-230,318-339,342-358,364-386 1k5h d1k5hb1 B:225-240,328-349,352-367,374-396 1t1s d1t1sa1 A:224-239,327-348,351-366,373-397 1t1r d1t1ra1 A:224-239,327-348,351-366,373-397 1jvs d1jvsa1 A:224-239,327-348,351-366,373-399 2egh d2egha1 A:224-239,327-348,351-366,373-398 16. a.4.14 KorB DNA-binding domain-like contains HTH motif in the common core; also contains extra N-terminal helix and C-terminal subdomain of 4 helices (left-handed superhelix) ! DNA/RNA-binding 3-helical bundle core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down 1vz0 d1vz0c1 C:161-171,174-185,185-200,202-211 1vz0 d1vz0e1 E:161-171,174-185,185-200,202-213 1r71 d1r71a_ A:195-205,209-224,223-234,239-252 1vz0 d1vz0b1 B:161-171,174-185,185-200,202-214 1r71 d1r71c_ C:195-205,209-224,223-234,239-251 1r71 d1r71b_ B:195-205,209-224,223-234,239-252 1r71 d1r71d_ D:195-205,209-224,223-234,239-252 1vz0 d1vz0b1 B:147-161,161-171,174-185,185-200 1vz0 d1vz0c1 C:147-161,161-171,174-185,185-200 1vz0 d1vz0e1 E:147-161,161-171,174-185,185-200 1vz0 d1vz0d1 D:147-161,161-171,174-185,185-200 1vz0 d1vz0f1 F:161-171,174-185,185-200,202-210 1vz0 d1vz0h1 H:147-161,161-171,174-185,185-200 1vz0 d1vz0d1 D:161-171,174-185,185-200,202-214 1vz0 d1vz0a1 A:147-161,161-171,174-185,185-200 1vz0 d1vz0g1 G:147-161,161-171,174-185,185-208 1vz0 d1vz0h1 H:161-171,174-185,185-200,202-209 19. a.182.1 GatB/YqeY motif GatB/YqeY motif multihelical; consists of two different alpha-helical bundles (4-helical and 3-helical) 2g5i d2g5ib1 B:295-308,310-321,320-334,336-356 2f2a d2f2ab1 B:295-308,310-321,320-334,336-356 2dqn d2dqnb1 B:295-308,310-321,320-334,336-356 2df4 d2df4b1 B:295-308,310-321,320-334,336-347 2g5h d2g5hb1 B:295-308,310-321,320-334,336-347 2f2a d2f2ab1 B:336-356,365-379,382-397,399-408 1zq1 d1zq1d1 D:458-471,473-484,484-496,499-512 2g5i d2g5ib1 B:336-356,365-379,382-397,399-408 1zq1 d1zq1c1 C:458-471,473-484,484-496,499-512 2dqn d2dqnb1 B:336-356,365-381,386-397,399-407 2f2a d2f2ab1 B:320-334,336-356,365-379,382-397 2g5i d2g5ib1 B:320-334,336-356,365-379,382-397 2dqn d2dqnb1 B:320-334,336-356,365-381,386-397 2g5h d2g5hb1 B:320-334,336-347,365-378,382-397 2g5h d2g5hb1 B:310-321,320-334,336-347,365-378 2f2a d2f2ab1 B:310-321,320-334,336-356,365-379 2g5i d2g5ib1 B:310-321,320-334,336-356,365-379 2dqn d2dqnb1 B:310-321,320-334,336-356,365-381 2df4 d2df4b1 B:310-321,320-334,336-347,365-381 2g5h d2g5hb1 B:295-308,310-321,320-334,346-356 2df4 d2df4b1 B:295-308,310-321,320-334,346-356 2df4 d2df4b1 B:320-334,336-347,365-381,386-397 2g5h d2g5hb1 B:320-334,346-356,365-378,382-397 2df4 d2df4b1 B:320-334,346-356,365-381,386-397 21. a.75.1 Ribosomal protein S7 Ribosomal protein S7 core: 5 helices; contains one more helix and a beta-hairpin outside the core 2i2u d2i2ug1 G:19-30,34-54,91-111,114-126 2vhp d2vhpg1 G:19-30,34-54,91-111,114-126 2qnh d2qnhh1 H:20-32,35-55,92-111,115-130 2aw7 d2aw7g1 G:19-31,34-54,91-111,114-126 2ow8 d2ow8h1 H:20-31,35-55,92-111,115-130 1vs7 d1vs7g1 G:19-31,34-54,91-111,114-126 2qan d2qang1 G:19-31,34-54,91-111,114-129 2qal d2qalg1 G:19-31,34-54,91-111,114-129 2i2p d2i2pg1 G:19-31,34-54,91-111,114-129 2qbd d2qbdg1 G:19-31,34-54,91-111,114-129 2qbf d2qbfg1 G:19-31,34-54,91-111,114-129 1n33 d1n33g_ G:20-32,35-55,92-111,115-130 2qow d2qowg1 G:19-31,34-54,91-110,114-129 1xmo d1xmog_ G:20-32,35-55,92-111,115-130 2z4m d2z4mg1 G:19-31,34-54,91-111,114-129 2z4k d2z4kg1 G:19-31,34-54,91-111,114-129 2avy d2avyg1 G:19-30,34-54,91-111,114-129 2uxc d2uxcg1 G:20-32,35-55,92-111,115-130 2uub d2uubg1 G:20-32,35-55,92-112,115-130 2qbh d2qbhg1 G:19-31,34-54,91-111,114-129 2qbj d2qbjg1 G:19-31,34-54,91-111,114-129 2uua d2uuag1 G:20-32,35-55,92-111,115-130 1xnq d1xnqg_ G:20-32,35-55,92-112,115-130 2vqe d2vqeg1 G:20-32,35-55,92-112,115-130 2vho d2vhog1 G:19-30,34-54,91-111,114-129 2qb9 d2qb9g1 G:19-31,34-54,91-111,114-129 2qbb d2qbbg1 G:19-31,34-54,91-111,114-129 1hnx d1hnxg_ G:20-32,35-55,92-112,115-130 2uuc d2uucg1 G:20-32,35-55,92-112,115-130 1xnr d1xnrg_ G:20-32,35-55,92-112,115-130 2qoy d2qoyg1 G:19-31,34-54,91-111,114-129 2uu9 d2uu9g1 G:20-32,35-55,92-112,115-130 2e5l d2e5lg1 G:20-32,35-55,92-111,115-130 3df1 d3df1g1 G:19-31,34-54,91-110,114-129 1hnw d1hnwg_ G:20-32,35-55,92-112,115-130 3df3 d3df3g1 G:19-31,34-54,91-110,114-129 2vqf d2vqfg1 G:20-32,35-55,92-112,115-130 1x18 d1x18f1 F:20-32,35-55,92-112,115-130 2f4v d2f4vg1 G:20-32,35-55,92-112,115-130 2hgi d2hgij1 J:20-32,35-55,92-111,115-130 2hgp d2hgpj1 J:20-32,35-55,92-111,115-130 1n32 d1n32g_ G:20-32,35-55,92-111,115-130 2uxb d2uxbg1 G:20-32,35-55,92-112,115-130 2hgr d2hgrj1 J:20-32,35-55,92-112,115-130 2qou d2qoug1 G:19-31,34-54,91-111,114-129 1hus d1husa_ A:19-30,34-54,91-110,114-129 1hnz d1hnzg_ G:20-32,35-55,92-112,115-130 2j02 d2j02g1 G:20-32,35-55,92-112,115-130 2j00 d2j00g1 G:20-32,35-55,92-112,115-130 1rss d1rssa_ A:20-32,35-55,92-111,115-130 2hhh d2hhhg1 G:20-32,35-55,92-111,115-130 1hr0 d1hr0g_ G:20-32,35-55,92-112,115-130 1fjg d1fjgg_ G:20-32,35-55,92-112,115-130 1i95 d1i95g_ G:20-32,35-55,92-112,115-130 2qp0 d2qp0g1 G:19-30,34-54,91-110,114-129 2uxd d2uxdg1 G:20-32,35-54,92-112,115-130 3d5a d3d5ag1 G:20-32,35-55,92-112,115-130 3d5c d3d5cg1 G:20-32,35-55,92-112,115-130 2b64 d2b64g1 G:20-32,35-55,92-111,115-130 2b9o d2b9og1 G:20-32,35-55,92-111,115-130 2b9m d2b9mg1 G:20-32,35-55,92-111,115-130 1i97 d1i97g_ G:20-32,35-55,92-111,115-130 2v46 d2v46g1 G:20-32,35-55,92-111,115-130 2v48 d2v48g1 G:20-32,35-55,92-111,115-130 1n36 d1n36g_ G:20-32,35-55,92-112,115-130 1iqv d1iqva_ A:65-78,98-119,156-179,182-197 1yl4 d1yl4j1 J:20-31,35-55,92-111,115-130 1n34 d1n34g_ G:20-32,35-55,92-112,115-130 3d5c d3d5cg1 G:35-55,57-70,92-112,115-130 3d5a d3d5ag1 G:35-55,57-70,92-112,115-130 2uxd d2uxdg1 G:35-54,57-70,92-112,115-130 1i95 d1i95g_ G:35-55,57-70,92-112,115-130 2uxb d2uxbg1 G:35-55,57-70,92-112,115-130 28. d.178.1 Aromatic aminoacid monoxygenases, catalytic and oligomerization domains Aromatic aminoacid monoxygenases, catalytic and oligomerization domains unusual fold 1kw0 d1kw0a_ A:250-261,296-313,314-331,391-406 1mmt d1mmta_ A:250-261,296-311,314-331,391-406 1mmk d1mmka_ A:250-261,296-311,314-331,391-406 2pah d2pahb_ B:250-261,296-311,314-331,391-407 1mlw d1mlwa_ A:237-248,283-298,301-318,378-393 1toh d1toha_ A:296-307,342-357,360-377,437-452 1dmw d1dmwa_ A:250-261,296-311,314-331,391-407 1j8u d1j8ua_ A:250-261,296-311,314-331,391-407 1j8t d1j8ta_ A:250-261,296-311,314-331,391-407 5pah d5paha_ A:250-261,296-311,314-331,391-407 3pah d3paha_ A:250-261,296-311,314-331,391-407 4pah d4paha_ A:250-261,296-311,314-331,391-407 1lrm d1lrma_ A:250-261,296-311,314-331,391-407 1phz d1phza2 A:250-261,296-311,314-331,391-407 6pah d6paha_ A:250-261,296-311,314-331,391-407 1tdw d1tdwa_ A:250-261,296-311,314-331,391-407 1tg2 d1tg2a_ A:250-261,296-311,314-331,391-407 2pah d2paha_ A:250-261,296-311,314-331,391-407 1pah d1paha_ A:250-261,296-311,314-331,391-406 2phm d2phma2 A:250-261,296-311,314-331,391-406 1ltv d1ltva_ A:103-114,149-166,168-185,246-257 1ltu d1ltua_ A:103-114,149-166,168-185,246-257 1toh d1toha_ A:296-307,342-357,360-377,414-421 1ltv d1ltva_ A:103-114,149-166,168-185,257-268 1ltz d1ltza_ A:103-114,149-166,168-185,257-268 1ltu d1ltua_ A:103-114,149-166,168-185,257-268 30. e.22.1 Dehydroquinate synthase-like Dehydroquinate synthase-like 2 domains: (1) alpha/beta of a Rossmann-fold topology, binds NAD (2) multihelical array 1rrm d1rrmb_ B:186-207,259-274,276-293,371-385 2bl4 d2bl4b1 B:1186-1207,1259-1274,1276-1293,1371-1383 1rrm d1rrma_ A:186-207,259-274,276-293,371-385 1vhd d1vhda_ A:179-200,253-267,269-290,345-360 1o2d d1o2db_ B:179-200,253-267,269-286,345-358 2bi4 d2bi4b1 B:1186-1207,1260-1274,1276-1293,1371-1383 2bl4 d2bl4a1 A:186-207,260-274,276-293,371-383 2bi4 d2bi4a1 A:186-207,260-274,276-293,371-383 1o2d d1o2da_ A:179-200,253-267,269-290,345-358 1vlj d1vljb_ B:185-207,265-279,281-298,382-395 1vlj d1vlja_ A:185-207,265-279,281-298,382-395 1oj7 d1oj7a_ A:184-205,264-278,280-297,375-387 1oj7 d1oj7d_ D:184-206,264-278,280-297,375-387 1oj7 d1oj7b_ B:184-206,264-278,280-297,375-387 1oj7 d1oj7c_ C:184-206,264-278,280-297,375-387 1nve d1nvea_ A:184-203,268-282,286-306,383-393 1nvd d1nvda_ A:184-203,268-282,286-306,383-393 1nve d1nvec_ C:184-203,268-282,286-306,383-393 1nr5 d1nr5b_ B:184-203,268-282,286-306,383-393 1nve d1nved_ D:184-203,268-282,286-306,383-392 1nvd d1nvdb_ B:184-203,268-282,286-306,383-393 1nve d1nveb_ B:184-203,268-282,286-306,383-392 1sg6 d1sg6a_ A:184-203,268-282,286-306,383-392 1nva d1nvaa_ A:184-203,268-282,286-306,383-392 1nva d1nvab_ B:184-203,268-282,286-306,383-392 1nua d1nuab_ B:184-204,268-282,286-306,383-392 1nua d1nuaa_ A:184-204,268-282,286-306,383-392 1sg6 d1sg6b_ B:184-203,268-282,286-306,383-392 1nvb d1nvba_ A:184-203,268-282,286-306,383-392 1dqs d1dqsb_ B:184-203,268-282,286-306,383-392 1nvf d1nvfc_ C:184-203,268-282,286-306,383-391 1nvb d1nvbb_ B:184-203,268-282,286-306,383-392 1nvf d1nvfb_ B:184-203,268-282,286-306,383-391 1nvf d1nvfa_ A:184-203,268-282,286-306,383-391 1nr5 d1nr5a_ A:184-203,268-282,286-306,383-392 31. a.110.1 Aldehyde ferredoxin oxidoreductase, C-terminal domains Aldehyde ferredoxin oxidoreductase, C-terminal domains multihelical; consists of two all-alpha domains 1b4n d1b4nb1 B:306-318,321-336,338-356,366-380 1b25 d1b25a1 A:306-318,321-336,338-356,366-380 1b4n d1b4nc1 C:306-318,321-336,338-356,366-380 1b25 d1b25b1 B:306-318,321-336,338-356,366-380 1b25 d1b25c1 C:306-318,321-336,338-356,366-380 1b4n d1b4nd1 D:306-318,321-336,338-356,366-380 1b25 d1b25d1 D:306-318,321-336,338-356,366-380 1b4n d1b4na1 A:306-318,321-336,338-356,366-380 1aor d1aorb1 B:311-323,326-341,343-361,378-392 1aor d1aora1 A:311-323,326-341,343-361,378-392 1aor d1aorb1 B:432-442,452-460,471-492,494-501 1aor d1aora1 A:432-442,452-460,471-492,494-501 1b4n d1b4nb1 B:238-251,270-278,306-318,321-336 1b25 d1b25c1 C:238-251,270-278,306-318,321-336 1b25 d1b25a1 A:238-251,270-278,306-318,321-336 1b4n d1b4nc1 C:238-251,270-278,306-318,321-336 1b4n d1b4nd1 D:238-251,270-278,306-318,321-336 1b4n d1b4nd1 D:421-431,441-448,467-489,491-499 1b4n d1b4nc1 C:421-431,441-448,467-489,491-499 1b4n d1b4na1 A:421-431,441-448,467-489,491-499 1b4n d1b4nb1 B:421-431,441-448,467-489,491-499 1b25 d1b25a1 A:421-431,441-448,467-489,491-499 1b25 d1b25d1 D:421-431,441-448,467-489,491-499 1b25 d1b25c1 C:421-431,441-448,467-489,491-499 1b25 d1b25b1 B:421-431,441-448,467-489,491-499 34. a.102.2 Seven-hairpin glycosidases alpha/alpha toroid multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies 1nxc d1nxca_ A:191-217,240-254,563-582,605-622 1dl2 d1dl2a_ A:34-58,81-98,449-468,497-514 1g6i d1g6ia_ A:34-58,81-98,449-468,497-514 1krf d1krfa_ A:36-60,80-94,423-442,466-482 1kkt d1kkta_ A:36-60,80-94,423-442,466-482 2ri9 d2ri9a1 A:1036-1060,1080-1094,1423-1442,1466-1482 2ri8 d2ri8a1 A:1036-1060,1080-1094,1423-1442,1466-1482 1kkt d1kktb_ B:36-60,80-94,423-442,466-482 1kre d1kreb_ B:36-60,80-94,423-442,466-482 1krf d1krfb_ B:36-60,80-94,423-442,466-482 1kre d1krea_ A:36-60,80-94,423-442,466-482 2ri9 d2ri9b1 B:2036-2060,2080-2094,2423-2442,2466-2482 1hcu d1hcud_ D:12-35,55-69,407-426,450-466 1hcu d1hcub_ B:12-35,55-69,407-426,450-466 2ri8 d2ri8b1 B:2036-2060,2080-2094,2423-2442,2466-2482 1hcu d1hcua_ A:12-35,55-69,407-426,450-466 1hcu d1hcuc_ C:12-35,55-69,407-426,450-466 1fmi d1fmia_ A:247-269,288-302,613-632,657-674 1fo2 d1fo2a_ A:247-269,288-302,613-632,657-674 1fo3 d1fo3a_ A:247-269,288-302,613-632,657-674 1x9d d1x9da1 A:247-269,288-302,613-632,657-673 35. a.235.1 ATP-dependent DNA ligase DNA-binding domain ATP-dependent DNA ligase DNA-binding domain multihelical; duplication: contains two intertwined structural repeats related by pseudo twofold symmetry 1x9n d1x9na1 A:454-471,488-511,512-524,524-533 1x9n d1x9na1 A:350-363,365-377,418-434,434-448 44. a.209.1 ADP-ribosylglycohydrolase ADP-ribosylglycohydrolase multihelical; bundle 1t5j d1t5ja_ A:1-26,60-73,239-251,253-270 45. a.257.1 SipA N-terminal domain-like SipA N-terminal domain-like multihelical; bundle; the last helix is buried inside the bundle 2fm8 d2fm8c1 C:53-68,72-83,85-107,109-131 2fm9 d2fm9a1 A:54-71,72-83,85-107,109-131 46. a.177.1 Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors multihelical; consists of a conserved 4-helical core and a variable insert subdomain 1ku2 d1ku2a2 A:93-107,206-218,223-242,249-270 1zyr d1zyrp3 P:75-92,191-203,208-227,234-257 1ku2 d1ku2b2 B:93-107,206-218,223-242,249-270 2a68 d2a68p3 P:75-92,191-203,208-227,234-257 2a6e d2a6ep3 P:75-92,191-203,208-227,234-257 2a6h d2a6hp3 P:75-92,191-203,208-227,234-257 2cw0 d2cw0f3 F:75-92,191-203,208-227,234-257 1zyr d1zyrf3 F:75-92,191-203,208-227,234-257 2be5 d2be5f3 F:75-92,191-203,208-227,234-257 2a6h d2a6hf3 F:75-92,191-203,208-227,234-257 2be5 d2be5p3 P:75-92,191-203,208-227,234-257 2cw0 d2cw0p3 P:75-92,191-203,208-227,234-257 2a69 d2a69p3 P:75-92,191-203,208-227,234-257 1iw7 d1iw7f3 F:75-92,191-203,208-227,234-257 2a68 d2a68f3 F:75-92,191-203,208-227,234-257 2a6e d2a6ef3 F:75-92,191-203,208-227,234-257 1iw7 d1iw7p3 P:75-92,191-203,208-227,234-257 2a69 d2a69f3 F:75-92,191-203,208-227,234-257 1smy d1smyf3 F:75-92,191-203,208-227,234-257 1smy d1smyp3 P:75-92,191-203,208-227,234-257 48. a.69.4 BH3980-like Left-handed superhelix core: 4-5 helices; bundle; left-handed superhelix 2o3l d2o3la1 A:13-26,26-44,47-69,79-95 2hh6 d2hh6a1 A:1-28,28-45,50-72,82-94 2o3l d2o3lb1 B:17-26,26-44,47-69,79-94 50. a.128.1 Terpenoid synthases duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J ! Terpenoid synthases multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers 1hm4 d1hm4a_ A:16-26,49-59,62-86,178-191 5eas d5easa2 A:332-357,357-386,403-416,419-429 5eat d5eata2 A:332-357,357-386,403-416,419-429 1hxa d1hxaa2 A:332-357,357-386,403-416,419-429 1hxg d1hxga2 A:332-357,357-386,403-416,419-429 1hx9 d1hx9a2 A:332-357,357-386,403-416,419-429 1di1 d1di1a_ A:53-69,84-94,97-122,203-218 1hxc d1hxca2 A:332-357,356-386,403-416,419-429 1di1 d1di1b_ B:53-69,84-94,97-122,203-218 1dgp d1dgpa_ A:53-69,84-94,97-122,203-218 1hm7 d1hm7a_ A:16-26,49-59,62-86,178-191 1dgp d1dgpb_ B:53-69,84-94,97-122,203-218 1hm4 d1hm4b_ B:16-26,49-59,62-86,178-191 1hm7 d1hm7b_ B:16-26,49-59,62-86,178-191 1ps1 d1ps1a_ A:16-26,49-59,62-86,178-191 1ps1 d1ps1b_ B:18-34,49-59,62-86,178-191 1ezf d1ezfb_ B:37-52,51-61,62-86,176-191 5eau d5eaua2 A:332-357,358-386,403-416,419-429 1ezf d1ezfc_ C:38-52,51-61,62-86,176-191 1ezf d1ezfa_ A:38-52,51-61,62-86,175-191 2q9z d2q9zb1 B:28-50,59-79,82-102,187-197 1rtr d1rtra_ A:5-22,44-58,60-84,178-194 1rtr d1rtrb_ B:5-22,44-58,60-84,178-194 1jfg d1jfgb_ B:28-49,59-79,82-102,187-197 2q9y d2q9yb1 B:28-49,59-79,82-102,187-197 1n21 d1n21a2 A:382-408,411-436,453-466,471-481 1jfa d1jfab_ B:28-49,59-79,82-102,187-197 1n1z d1n1za2 A:382-408,411-436,453-466,471-481 1n20 d1n20b2 B:382-408,411-436,453-466,471-481 1n1z d1n1zb2 B:382-408,411-436,453-466,471-481 1n20 d1n20a2 A:382-408,411-436,453-466,471-481 1n1b d1n1bb2 B:382-408,411-436,453-466,471-481 1n1b d1n1ba2 A:382-408,411-436,453-466,471-481 1n22 d1n22b2 B:382-408,411-436,453-466,471-481 1kiz d1kizb_ B:28-49,59-79,82-102,187-197 1n22 d1n22a2 A:382-408,411-436,453-466,471-481 1n24 d1n24b2 B:382-408,411-436,453-466,471-481 1n24 d1n24a2 A:382-408,411-436,453-466,471-481 1yyt d1yytb1 B:28-49,59-79,82-102,187-197 1n23 d1n23b2 B:382-408,411-436,453-466,471-481 1n23 d1n23a2 A:382-408,411-436,453-466,471-481 1kiy d1kiyb_ B:28-49,59-79,82-102,187-197 1jfg d1jfga_ A:28-49,59-79,82-102,187-197 1yyt d1yyta1 A:28-49,59-79,82-103,187-197 1yyu d1yyub1 B:28-49,59-79,82-103,187-197 1jfa d1jfaa_ A:28-49,59-79,82-103,187-197 2q9y d2q9ya1 A:28-50,59-79,82-103,187-197 1kiz d1kiza_ A:28-49,59-79,82-103,187-197 1yyu d1yyua1 A:28-49,59-79,82-103,187-197 1kiy d1kiya_ A:28-49,59-79,82-103,187-197 2q9z d2q9za1 A:28-50,59-79,82-103,187-197 1vg7 d1vg7a_ A:9-29,42-56,60-86,155-177 1v4i d1v4ia_ A:9-29,42-56,60-86,155-177 1v4j d1v4jb_ B:9-28,42-56,60-86,155-177 1vg6 d1vg6a_ A:9-29,42-56,60-86,155-177 1v4j d1v4ja_ A:9-29,42-56,60-86,155-177 1v4e d1v4eb_ B:9-28,42-56,60-86,155-177 1vg2 d1vg2a_ A:9-29,42-56,60-86,155-177 1vg4 d1vg4a_ A:9-28,42-56,60-86,155-177 1v4e d1v4ea_ A:9-29,42-56,60-86,155-177 1hxg d1hxga2 A:222-255,266-279,283-308,403-416 1rqj d1rqjb_ B:23-46,67-81,83-107,203-219 1rqj d1rqja_ A:23-46,67-81,83-107,203-219 1hxc d1hxca2 A:222-255,266-279,283-308,403-416 1rqi d1rqib_ B:23-46,67-81,83-107,203-219 1vg4 d1vg4b_ B:9-28,42-56,60-86,155-177 1hx9 d1hx9a2 A:222-255,266-279,283-308,403-416 5eat d5eata2 A:222-255,266-279,283-308,403-416 5eas d5easa2 A:222-255,266-279,283-308,403-416 5eau d5eaua2 A:222-255,266-279,283-308,403-416 1hxa d1hxaa2 A:222-255,266-279,283-308,403-416 1rqi d1rqia_ A:23-47,67-81,83-107,203-219 1ubv d1ubva_ A:20-49,72-86,92-122,215-232 1ubx d1ubxa_ A:20-49,72-86,92-122,215-232 1fps d1fpsa_ A:20-49,72-86,92-122,215-232 1ubw d1ubwa_ A:20-49,72-86,92-122,215-232 1uby d1ubya_ A:20-49,72-86,92-122,215-232 1v4k d1v4ka_ A:11-28,42-56,60-86,155-177 1v4h d1v4ha_ A:11-29,42-56,60-86,155-177 60. a.202.1 Superantigen MAM Superantigen MAM multihelical; consists of two different alpha-helical bundles 2icw d2icwh1 H:25-37,38-67,69-94,96-126 2icw d2icwg1 G:25-37,38-67,69-94,96-126 2oje d2ojed1 D:25-37,38-67,69-94,96-126 2oje d2ojeh1 H:25-37,38-67,69-94,96-126 1r5i d1r5id_ D:25-37,38-67,69-94,96-126 1r5i d1r5ih_ H:25-37,38-67,69-94,96-126 61. a.48.1 N-terminal domain of cbl (N-cbl) N-cbl like 4 helices; bundle, left-handed twist; left-handed superhelix 1b47 d1b47c2 C:52-72,83-103,112-137,145-170 3buo d3buod2 D:52-72,83-103,112-137,145-170 1b47 d1b47b2 B:52-72,83-103,112-137,145-170 3buo d3buob2 B:52-72,83-103,112-137,145-170 3buw d3buwd2 D:52-72,83-103,112-137,145-170 3bux d3buxb2 B:52-72,83-103,112-137,145-170 3buw d3buwb2 B:52-72,83-103,112-137,145-170 1b47 d1b47a2 A:52-72,83-103,112-137,145-170 3bux d3buxd2 D:52-72,83-103,112-137,145-170 3bun d3bunb2 B:52-72,83-103,112-137,145-170 2cbl d2cbla2 A:52-72,83-103,112-137,145-170 3bum d3bumb2 B:52-72,83-103,112-137,145-170 1yvh d1yvha2 A:52-72,83-103,112-137,145-170 1fbv d1fbva2 A:52-72,83-103,112-137,145-169 64. f.44.1 Ammonium transporter Ammonium transporter 11 transmembrane helices; duplication: consist of 2 structural repeats of five helices each plus extra C-terminal helix 2ns1 d2ns1a1 A:6-37,37-63,96-120,124-139 2nuu d2nuub1 B:6-37,37-63,96-120,124-140 2nuu d2nuuf1 F:6-37,37-62,96-120,124-139 2nuu d2nuue1 E:6-37,37-62,96-120,124-139 2nuu d2nuua1 A:6-37,37-63,96-120,124-140 2nuu d2nuuc1 C:6-37,37-62,96-120,124-139 2nop d2nopa1 A:6-37,37-62,96-120,124-139 3c1g d3c1ga1 A:197-221,224-254,257-276,280-301 1xqf d1xqfa_ A:197-221,224-254,257-276,280-301 1xqe d1xqea_ A:197-221,224-254,257-276,280-301 2nuu d2nuud1 D:6-37,37-62,96-120,124-139 2nuu d2nuuf1 F:197-221,224-254,257-276,280-301 2nop d2nopa1 A:197-221,224-254,257-276,280-301 2nuu d2nuue1 E:197-221,224-254,257-276,280-301 2nuu d2nuud1 D:197-221,224-254,257-276,280-301 2ns1 d2ns1a1 A:197-221,224-254,257-276,280-300 2nmr d2nmra1 A:197-221,224-254,257-276,280-301 2nuu d2nuuc1 C:197-221,224-254,257-276,280-300 2nuu d2nuub1 B:197-221,224-254,257-276,280-301 2nuu d2nuua1 A:197-221,224-254,257-276,280-300 1xqf d1xqfa_ A:37-63,96-120,124-139,163-181 2nuu d2nuub1 B:37-63,96-120,124-140,163-183 3c1g d3c1ga1 A:37-62,96-120,124-139,163-181 2nop d2nopa1 A:37-62,96-120,124-139,163-181 2ns1 d2ns1a1 A:37-63,96-120,124-139,163-183 2nmr d2nmra1 A:37-62,96-120,124-139,163-181 2nuu d2nuua1 A:37-63,96-120,124-140,163-183 3c1g d3c1ga1 A:224-254,257-276,280-301,311-335 2nop d2nopa1 A:224-254,257-276,280-301,311-335 1xqf d1xqfa_ A:224-254,257-276,280-301,311-335 2nuu d2nuuc1 C:37-62,96-120,124-139,163-183 2nuu d2nuuf1 F:37-62,96-120,124-139,163-183 2nuu d2nuue1 E:37-62,96-120,124-139,163-183 2nuu d2nuud1 D:37-62,96-120,124-139,163-183 1xqe d1xqea_ A:37-63,96-120,124-139,163-183 1u77 d1u77a_ A:37-62,96-120,124-139,163-183 1u7c d1u7ca_ A:37-62,96-120,124-139,163-183 1u7g d1u7ga_ A:37-62,96-120,124-139,163-183 2ns1 d2ns1a1 A:224-254,257-276,280-300,313-334 2nuu d2nuuc1 C:224-254,257-276,280-300,313-335 2nuu d2nuub1 B:224-254,257-276,280-301,313-334 2nuu d2nuuf1 F:224-254,257-276,280-301,313-335 2nuu d2nuue1 E:224-254,257-276,280-301,313-335 2nuu d2nuua1 A:224-254,257-276,280-300,313-335 2nuu d2nuud1 D:224-254,257-276,280-301,313-335 1xqe d1xqea_ A:224-254,257-276,280-301,313-335 2nmr d2nmra1 A:224-254,257-276,280-301,313-335 1u77 d1u77a_ A:194-221,224-254,257-276,280-307 1u7g d1u7ga_ A:194-221,224-254,257-276,280-307 1u7c d1u7ca_ A:194-221,224-254,257-276,280-307 2ns1 d2ns1a1 A:37-63,96-120,124-139,347-382 2nuu d2nuub1 B:37-63,96-120,124-140,347-382 1u77 d1u77a_ A:37-62,96-120,124-139,347-382 2nuu d2nuua1 A:37-63,96-120,124-140,347-382 1u7c d1u7ca_ A:37-62,96-120,124-139,347-382 1u77 d1u77a_ A:224-254,257-276,280-307,310-335 1u7g d1u7ga_ A:37-62,96-120,124-139,347-382 1u7g d1u7ga_ A:224-254,257-276,280-307,310-335 1xqf d1xqfa_ A:37-63,96-120,138-150,163-181 2ns1 d2ns1a1 A:37-63,96-120,138-150,163-183 1u7c d1u7ca_ A:224-254,257-276,280-307,310-335 2nuu d2nuuc1 C:37-62,96-120,124-139,347-382 1xqe d1xqea_ A:37-63,96-120,124-139,347-382 2nuu d2nuud1 D:37-62,96-120,124-139,347-382 3c1g d3c1ga1 A:37-62,96-120,124-139,347-382 2nmr d2nmra1 A:37-62,96-120,138-150,163-181 2nop d2nopa1 A:37-62,96-120,138-150,163-181 2nop d2nopa1 A:37-62,96-120,124-139,347-382 2nuu d2nuue1 E:37-62,96-120,124-139,347-382 2nuu d2nuuf1 F:37-62,96-120,124-139,347-382 2nmr d2nmra1 A:37-62,96-120,124-139,347-382 3c1g d3c1ga1 A:37-62,96-120,138-150,163-181 1xqf d1xqfa_ A:37-63,96-120,124-139,347-382 1xqe d1xqea_ A:37-63,96-120,138-150,163-183 2nuu d2nuuf1 F:37-62,96-120,138-150,163-183 2nuu d2nuuc1 C:37-62,96-120,138-150,163-183 1u77 d1u77a_ A:37-62,96-120,138-150,163-183 2nuu d2nuud1 D:37-62,96-120,138-150,163-183 1u7c d1u7ca_ A:37-62,96-120,138-150,163-183 1u7g d1u7ga_ A:37-62,96-120,138-150,163-183 2nuu d2nuue1 E:37-62,96-120,138-150,163-183 65. a.48.5 PG0775 C-terminal domain-like N-cbl like 4 helices; bundle, left-handed twist; left-handed superhelix 2oku d2okua1 A:454-467,470-498,499-531,530-558 2oku d2okub1 B:454-468,470-498,499-531,530-558 2oku d2okub1 B:445-454,470-498,499-531,530-558 67. f.51.1 Rhomboid-like Rhomboid-like 6 transmembrane helices 2irv d2irvb1 B:94-115,147-170,170-194,200-219 2irv d2irva1 A:94-115,147-170,170-194,199-219 2nrf d2nrfa1 A:94-115,147-170,170-194,199-219 2nrf d2nrfb1 B:94-115,147-170,170-194,199-219 3b45 d3b45a1 A:94-115,147-170,170-194,199-219 68. a.69.2 Ypt/Rab-GAP domain of gyp1p Left-handed superhelix core: 4-5 helices; bundle; left-handed superhelix 2g77 d2g77a1 A:330-344,353-372,377-397,414-437 1fkm d1fkma2 A:444-463,475-487,570-587,594-605 2g77 d2g77a2 A:444-463,475-487,570-587,594-605 1fkm d1fkma1 A:329-344,353-372,377-397,414-437 71. f.24.1 Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like 12 transmembrane helices in an approximate threefold rotational symmetric arrangement 2eim d2eimn1 N:182-199,227-263,269-288,298-328 2gsm d2gsmc1 C:226-241,271-307,312-331,341-373 1ar1 d1ar1a_ A:218-235,263-299,304-323,333-365 1m57 d1m57a_ A:226-243,271-307,312-331,341-373 1m56 d1m56a_ A:226-243,271-307,312-331,341-373 3dtu d3dtua1 A:226-243,271-307,312-331,341-373 1m57 d1m57g_ G:226-243,271-307,312-331,341-373 1m56 d1m56g_ G:226-243,271-307,312-331,341-373 1ocr d1ocrn_ N:182-199,227-263,269-288,298-330 2occ d2occa_ A:182-199,227-263,269-288,298-330 2occ d2occn_ N:182-199,227-263,269-288,298-330 1oco d1ocon_ N:182-197,227-263,269-288,298-330 1ocz d1oczn_ N:182-197,227-263,269-288,298-330 1oco d1ocoa_ A:182-197,227-263,269-288,298-330 1ocz d1ocza_ A:182-197,227-263,269-288,298-330 2dys d2dysa1 A:182-199,227-263,269-288,298-330 2ein d2einn1 N:182-199,227-263,269-288,298-330 2ein d2eina1 A:182-199,227-263,269-288,298-330 2dyr d2dyra1 A:182-199,227-263,269-288,298-330 2eik d2eika1 A:182-199,227-263,269-288,298-330 2eim d2eima1 A:182-199,227-263,269-288,298-330 1qle d1qlea_ A:218-235,263-298,304-323,333-365 1ehk d1ehka_ A:343-357,378-404,414-446,463-494 1fft d1ffta_ A:226-243,271-307,312-327,341-373 1fft d1fftf_ F:226-243,271-307,312-327,341-373 1ehk d1ehka_ A:220-256,343-357,378-404,414-446 1fft d1fftf_ F:271-307,378-404,413-440,449-478 1qle d1qlea_ A:370-396,405-432,441-470,479-514 1fft d1ffta_ A:271-307,378-404,413-440,449-478 1qle d1qlea_ A:263-298,370-396,405-432,441-470 1ocz d1ocza_ A:227-263,335-361,370-397,406-435 1oco d1ocoa_ A:227-263,335-361,370-396,406-435 1ocz d1oczn_ N:227-263,335-361,370-397,406-435 2gsm d2gsma1 A:378-404,413-440,449-478,487-522 1oco d1ocon_ N:227-263,335-361,370-396,406-435 1qle d1qlea_ A:83-121,218-235,263-298,304-323 1m57 d1m57a_ A:378-404,413-440,449-478,487-522 1occ d1occn_ N:227-263,335-361,370-397,406-435 1occ d1occa_ A:227-263,335-361,370-397,406-435 3dtu d3dtuc1 C:378-404,413-440,449-478,487-522 2eij d2eijn1 N:227-263,335-361,370-396,406-435 2eij d2eija1 A:227-263,335-361,370-396,406-435 1v55 d1v55n_ N:227-263,335-361,370-396,406-435 1v55 d1v55a_ A:227-263,335-361,370-396,406-435 2eil d2eila1 A:227-263,335-361,370-397,406-435 2eik d2eika1 A:227-263,335-361,370-396,406-435 2occ d2occn_ N:227-263,335-361,370-397,406-435 2gsm d2gsmc1 C:378-404,413-440,449-478,487-522 3dtu d3dtua1 A:378-404,413-440,449-478,487-522 2eik d2eikn1 N:227-263,335-361,370-396,406-435 2dys d2dysa1 A:227-263,335-361,370-397,406-435 2dys d2dysn1 N:227-263,335-361,370-397,406-435 2occ d2occa_ A:227-263,335-361,370-397,406-435 2dyr d2dyra1 A:227-263,335-361,370-397,406-435 2dyr d2dyrn1 N:227-263,335-361,370-397,406-435 1v54 d1v54a_ A:227-263,335-361,370-397,406-435 1v54 d1v54n_ N:227-263,335-361,370-397,406-435 1m57 d1m57a_ A:271-307,378-404,413-440,449-478 1m56 d1m56a_ A:378-404,413-440,449-478,487-522 1m56 d1m56a_ A:271-307,378-404,413-440,449-478 1xme d1xmea1 A:220-256,343-369,378-401,414-446 2eim d2eima1 A:50-88,182-199,227-263,269-288 1m56 d1m56g_ G:378-404,413-440,449-478,487-522 1m56 d1m56g_ G:271-307,378-404,413-440,449-478 2eim d2eimn1 N:50-88,182-199,227-263,269-288 1xme d1xmea1 A:64-98,180-208,220-256,526-543 2gsm d2gsma1 A:271-307,378-404,413-440,449-478 1ehk d1ehka_ A:64-98,180-208,220-256,526-543 2occ d2occn_ N:50-88,182-199,227-263,269-288 3dtu d3dtua1 A:271-307,378-404,413-440,449-478 2gsm d2gsmc1 C:271-307,378-404,413-440,449-478 2eik d2eika1 A:50-88,182-199,227-263,269-288 2occ d2occa_ A:50-88,182-199,227-263,269-288 3dtu d3dtuc1 C:271-307,378-404,413-440,449-478 1ocr d1ocrn_ N:50-88,182-199,227-263,269-288 1ocz d1oczn_ N:50-88,182-197,227-263,269-288 1ocz d1ocza_ A:50-88,182-197,227-263,269-288 1oco d1ocon_ N:335-361,370-396,406-435,444-479 1oco d1ocoa_ A:335-361,370-396,406-435,444-479 1oco d1ocoa_ A:50-88,182-197,227-263,269-288 1oco d1ocon_ N:50-88,182-197,227-263,269-288 1v55 d1v55n_ N:335-361,370-396,406-435,444-479 2eij d2eijn1 N:335-361,370-396,406-435,444-479 2eik d2eikn1 N:335-361,370-396,406-435,444-479 2eik d2eika1 A:335-361,370-396,406-435,444-479 2dyr d2dyra1 A:50-88,182-199,227-263,269-288 1v55 d1v55a_ A:335-361,370-396,406-435,444-479 2eij d2eija1 A:335-361,370-396,406-435,444-479 2dys d2dysa1 A:50-88,182-199,227-263,269-288 2ein d2eina1 A:50-88,182-199,227-263,269-288 2ein d2einn1 N:50-88,182-199,227-263,269-288 1v54 d1v54n_ N:335-361,370-397,406-435,444-479 2dyr d2dyrn1 N:335-361,370-397,406-435,444-479 2eil d2eila1 A:335-361,370-397,406-435,444-479 1v54 d1v54a_ A:335-361,370-397,406-435,444-479 2dyr d2dyra1 A:335-361,370-397,406-435,444-479 2occ d2occn_ N:335-361,370-397,406-435,444-479 1ocz d1ocza_ A:335-361,370-397,406-435,444-479 1occ d1occa_ A:335-361,370-397,406-435,444-479 1occ d1occn_ N:335-361,370-397,406-435,444-479 1ocz d1oczn_ N:335-361,370-397,406-435,444-479 2occ d2occa_ A:335-361,370-397,406-435,444-479 2dys d2dysn1 N:335-361,370-397,406-435,444-479 1fft d1ffta_ A:378-404,413-440,449-478,488-523 2dys d2dysa1 A:335-361,370-397,406-435,444-479 1fft d1fftf_ F:378-404,413-440,449-478,488-523 1ar1 d1ar1a_ A:83-121,218-235,263-299,304-323 1xme d1xmea1 A:343-369,378-401,414-446,463-494 2gsm d2gsmc1 C:91-129,226-241,271-307,312-331 1fft d1fftf_ F:95-132,226-243,271-307,312-327 1fft d1ffta_ A:95-132,226-243,271-307,312-327 3dtu d3dtua1 A:91-129,226-243,271-307,312-331 1ehk d1ehka_ A:64-98,180-208,220-256,261-280 1xme d1xmea1 A:64-98,180-208,220-256,261-280 1m57 d1m57a_ A:91-129,226-243,271-307,312-331 1m57 d1m57g_ G:91-129,226-243,271-307,312-331 1m56 d1m56g_ G:91-129,226-243,271-307,312-331 1m56 d1m56a_ A:91-129,226-243,271-307,312-331 1occ d1occa_ A:50-88,182-216,227-263,269-288 1occ d1occn_ N:50-88,182-216,227-263,269-288 1ocr d1ocra_ A:50-88,182-216,227-263,269-288 1v55 d1v55a_ A:50-88,182-216,227-263,269-288 2eik d2eikn1 N:50-88,182-216,227-263,269-288 2eij d2eija1 A:50-88,182-216,227-263,269-288 1v55 d1v55n_ N:50-88,182-216,227-263,269-288 2eij d2eijn1 N:50-88,182-216,227-263,269-288 2dyr d2dyrn1 N:50-88,182-216,227-263,269-288 1v54 d1v54n_ N:50-88,182-216,227-263,269-288 1v54 d1v54a_ A:50-88,182-216,227-263,269-288 2dys d2dysn1 N:50-88,182-216,227-263,269-288 2eil d2eila1 A:50-88,182-216,227-263,269-288 2eil d2eiln1 N:50-88,182-216,227-263,269-288 1ar1 d1ar1a_ A:370-396,405-437,441-470,479-514 2ein d2eina1 A:227-263,335-361,370-402,406-435 1ocr d1ocra_ A:227-263,335-361,370-402,406-435 2ein d2einn1 N:227-263,335-361,370-402,406-435 1ocr d1ocrn_ N:227-263,335-361,370-402,406-435 2eim d2eima1 A:227-263,335-361,370-402,406-435 1m57 d1m57g_ G:378-404,413-445,449-478,487-522 2eim d2eimn1 N:227-263,335-361,370-402,406-435 2eil d2eiln1 N:227-263,335-361,370-402,406-435 1ehk d1ehka_ A:180-208,220-256,261-280,291-328 1xme d1xmea1 A:180-208,220-256,261-280,291-328 1xme d1xmea1 A:15-39,64-98,102-127,142-175 1m57 d1m57a_ A:25-58,91-129,135-159,184-216 1m57 d1m57g_ G:25-58,91-129,135-159,184-216 2eil d2eiln1 N:335-361,370-402,406-435,444-479 1ocr d1ocrn_ N:335-361,370-402,406-435,444-479 2ein d2einn1 N:335-361,370-402,406-435,444-479 1m57 d1m57g_ G:271-307,378-404,413-445,449-478 1ar1 d1ar1a_ A:27-60,83-121,127-152,176-208 3dtu d3dtuc1 C:25-58,91-129,135-159,184-216 2eim d2eima1 A:335-361,370-402,406-435,444-479 2ein d2eina1 A:335-361,370-402,406-435,444-479 1ocr d1ocra_ A:335-361,370-402,406-435,444-479 2gsm d2gsma1 A:91-129,226-260,271-307,312-331 3dtu d3dtuc1 C:91-129,226-260,271-307,312-331 2gsm d2gsmc1 C:25-58,91-129,135-159,184-216 1ar1 d1ar1a_ A:263-299,370-396,405-437,441-470 3dtu d3dtua1 A:25-58,91-129,135-159,184-216 2gsm d2gsma1 A:25-58,91-129,135-159,184-216 2eim d2eimn1 N:335-361,370-402,406-435,444-479 2gsm d2gsma1 A:226-260,271-307,312-331,341-373 1qle d1qlea_ A:27-60,83-121,127-151,176-208 1m56 d1m56g_ G:25-58,91-129,135-159,184-216 3dtu d3dtuc1 C:226-260,271-307,312-331,341-373 1m56 d1m56a_ A:25-58,91-129,135-159,184-216 2occ d2occn_ N:11-44,50-88,94-120,140-172 2occ d2occa_ A:11-44,50-88,94-120,140-172 2dys d2dysa1 A:11-44,50-88,94-120,140-172 2eil d2eila1 A:11-44,50-88,94-120,140-172 1fft d1fftf_ F:53-86,95-132,138-163,184-216 2ein d2eina1 A:11-44,50-88,94-120,140-172 1fft d1ffta_ A:53-86,95-132,138-163,184-216 1ocr d1ocra_ A:182-216,227-263,269-288,298-330 2dys d2dysn1 N:11-44,50-88,94-120,140-172 2ein d2einn1 N:11-44,50-88,94-120,140-172 1v54 d1v54a_ A:11-44,50-88,94-120,140-172 1ocz d1oczn_ N:11-44,50-88,94-120,140-172 1occ d1occa_ A:11-44,50-88,94-120,140-172 1occ d1occn_ N:11-44,50-88,94-120,140-172 2eil d2eiln1 N:11-44,50-88,94-120,140-172 1ocz d1ocza_ A:11-44,50-88,94-120,140-172 1v54 d1v54n_ N:11-44,50-88,94-120,140-172 2dyr d2dyra1 A:11-44,50-88,94-120,140-172 1ocr d1ocra_ A:11-44,50-88,94-120,140-172 1ocr d1ocrn_ N:11-44,50-88,94-120,140-172 2dyr d2dyrn1 N:11-44,50-88,94-120,140-172 1occ d1occa_ A:182-216,227-263,269-288,298-330 1occ d1occn_ N:182-216,227-263,269-288,298-330 2dyr d2dyrn1 N:182-216,227-263,269-288,298-330 2eij d2eijn1 N:182-216,227-263,269-288,298-330 2eik d2eikn1 N:182-216,227-263,269-288,298-330 1v54 d1v54a_ A:182-216,227-263,269-288,298-330 1v54 d1v54n_ N:182-216,227-263,269-288,298-330 2eil d2eila1 A:182-216,227-263,269-288,298-330 2dys d2dysn1 N:182-216,227-263,269-288,298-330 2eil d2eiln1 N:182-216,227-263,269-288,298-330 2eij d2eija1 A:182-216,227-263,269-288,298-330 1v55 d1v55n_ N:182-216,227-263,269-288,298-330 1v55 d1v55a_ A:182-216,227-263,269-288,298-330 1oco d1ocoa_ A:11-44,50-88,94-120,140-172 1oco d1ocon_ N:11-44,50-88,94-120,140-172 1v55 d1v55a_ A:11-44,50-88,94-120,140-172 1v55 d1v55n_ N:11-44,50-88,94-120,140-172 2eik d2eika1 A:11-44,50-88,94-120,140-172 2eij d2eija1 A:11-44,50-88,94-120,140-172 2eik d2eikn1 N:11-44,50-88,94-120,140-172 2eij d2eijn1 N:11-44,50-88,94-120,140-172 2eim d2eima1 A:11-44,50-88,94-120,140-172 2eim d2eimn1 N:11-44,50-88,94-120,140-172 1ehk d1ehka_ A:15-48,64-98,102-127,142-175 1xme d1xmea1 A:220-256,343-369,400-410,414-446 73. f.1.1 Colicin Toxins' membrane translocation domains multi-helical domains of various folds which is thought to unfold in the membrane 1col d1cola_ A:5-31,31-49,146-165,168-188 1col d1colb_ B:5-31,31-49,146-165,168-188 1a87 d1a87a_ A:169-215,215-232,330-345,351-372 1rh1 d1rh1a2 A:290-341,341-359,456-475,478-498 74. e.64.1 FlhC-like FlhC-like 3 domains; d1 & d2 are similar three-helical bundles, with d1 containing an HTH motif; d3: zinc finger of a rubredoxin-like fold 2avu d2avuf1 F:5-23,25-34,90-107,116-130 2avu d2avue1 E:5-23,25-33,90-107,116-130 79. c.87.1 UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase consists of two non-similar domains with 3 layers (a/b/a) each ! domain 1: parallel beta-sheet of 7 strands, order 3214567 ! domain 2: parallel beta-sheet of 6 strands, order 321456 7gpb d7gpbd_ D:487-497,496-508,675-685,793-812 9gpb d9gpbc_ C:487-497,496-508,675-685,793-812 1abb d1abba_ A:487-497,496-508,675-685,793-812 1abb d1abbd_ D:487-497,496-508,675-685,793-812 1fu8 d1fu8a_ A:487-497,496-508,675-685,793-812 1gpa d1gpac_ C:487-497,496-508,675-685,793-812 2prj d2prja_ A:487-497,496-508,675-685,793-812 3cej d3cejb1 B:487-497,496-508,675-685,793-812 1fu4 d1fu4a_ A:487-497,496-508,675-685,793-812 1ftw d1ftwa_ A:487-497,496-508,675-685,793-812 1noi d1noid_ D:487-497,496-508,675-685,793-812 1fs4 d1fs4a_ A:487-497,496-508,675-685,793-812 2pri d2pria_ A:487-497,496-508,675-685,793-812 1fu7 d1fu7a_ A:487-497,496-508,675-685,793-812 1wv0 d1wv0a1 A:487-497,496-508,675-685,793-812 1gpa d1gpaa_ A:487-497,496-508,675-685,793-812 1fty d1ftya_ A:487-497,496-508,675-685,793-812 1ggn d1ggna_ A:487-497,496-508,675-685,793-812 1pyg d1pyga_ A:487-497,496-508,675-685,793-812 1gfz d1gfza_ A:487-497,496-508,675-685,793-812 1wut d1wuta1 A:487-497,496-508,675-685,793-812 1hlf d1hlfa_ A:487-497,496-508,675-685,793-812 1ftq d1ftqa_ A:487-497,496-508,675-685,793-812 1wv1 d1wv1a1 A:487-497,496-508,675-685,793-812 1gg8 d1gg8a_ A:487-497,496-508,675-685,793-812 1wuy d1wuya1 A:487-497,496-508,675-685,793-812 1abb d1abbb_ B:487-497,496-508,675-685,793-812 2ske d2skea_ A:487-497,496-508,675-685,793-812 1pyg d1pygb_ B:487-497,496-508,675-685,793-812 1c8k d1c8ka_ A:487-497,496-508,675-685,793-812 7gpb d7gpbc_ C:487-497,496-508,675-685,793-812 1c50 d1c50a_ A:487-497,496-508,675-685,793-812 3cej d3ceja1 A:487-497,496-508,675-685,793-812 2skc d2skca_ A:487-497,496-508,675-685,793-812 1ahp d1ahpa_ A:452-462,461-473,640-650,760-779 1ahp d1ahpb_ B:452-462,461-473,640-650,760-779 2skd d2skda_ A:487-497,496-508,675-685,793-812 2gm9 d2gm9a1 A:487-497,496-508,675-685,793-812 1gpy d1gpya_ A:487-497,496-508,675-685,793-812 7gpb d7gpbb_ B:487-497,496-508,675-685,793-812 1gpa d1gpad_ D:487-497,496-508,675-685,793-812 2qrq d2qrqa1 A:487-497,496-508,675-685,793-812 2iei d2ieib1 B:487-497,496-508,675-685,793-812 1abb d1abbc_ C:487-497,496-508,675-685,793-812 1e4o d1e4ob_ B:452-462,461-473,640-650,760-779 1e4o d1e4oa_ A:452-462,461-473,640-650,760-779 1pyg d1pygd_ D:487-497,496-508,675-685,793-812 1fa9 d1fa9a_ A:487-497,496-508,675-685,793-812 1axr d1axra_ A:487-497,496-508,675-685,793-812 9gpb d9gpbb_ B:487-497,496-508,675-685,793-812 2ecp d2ecpa_ A:487-497,496-508,675-685,793-812 2g9q d2g9qa1 A:487-497,496-508,675-685,793-812 1bx3 d1bx3a_ A:487-497,496-508,675-685,793-812 2pyi d2pyia1 A:487-497,496-508,675-685,793-812 2qrp d2qrpa1 A:487-497,496-508,675-685,793-812 1a8i d1a8ia_ A:487-497,496-508,675-685,793-812 1noj d1noja_ A:487-497,496-508,675-685,793-812 2pyd d2pyda1 A:487-497,496-508,675-685,793-812 2qn2 d2qn2a1 A:487-497,496-508,675-685,793-812 5gpb d5gpba_ A:487-497,496-508,675-685,793-812 2gj4 d2gj4a1 A:487-497,496-508,675-685,793-812 1h5u d1h5ua_ A:487-497,496-508,675-685,793-812 6gpb d6gpba_ A:487-497,496-508,675-685,793-812 2iei d2ieia1 A:487-497,496-508,675-685,793-812 4gpb d4gpba_ A:487-497,496-508,675-685,793-812 8gpb d8gpba_ A:487-497,496-508,675-685,793-812 1k06 d1k06a_ A:487-497,496-508,675-685,793-812 2ieg d2iegb1 B:487-497,496-508,675-685,793-812 1noi d1noia_ A:487-497,496-508,675-685,793-812 1z62 d1z62a1 A:487-497,496-508,675-685,793-812 1noi d1noib_ B:487-497,496-508,675-685,793-812 2gpn d2gpna_ A:487-497,496-508,675-685,793-812 1pyg d1pygc_ C:487-497,496-508,675-685,793-812 2qnb d2qnba1 A:487-497,496-508,675-685,793-812 1uzu d1uzua_ A:487-497,496-508,675-685,793-812 1lwn d1lwna_ A:487-497,496-508,675-685,793-812 1k08 d1k08a_ A:487-497,496-508,675-685,793-812 2qll d2qlla1 A:487-497,496-508,675-685,793-812 3gpb d3gpba_ A:487-497,496-508,675-685,793-812 2qn7 d2qn7a1 A:487-497,496-508,675-685,793-812 2qn3 d2qn3a1 A:487-497,496-508,675-685,793-812 1xl0 d1xl0a1 A:487-497,496-508,675-685,793-812 1p2b d1p2ba_ A:487-497,496-508,675-685,793-812 2ati d2atia1 A:487-497,496-508,675-685,793-812 1l5s d1l5sa_ A:487-497,496-508,675-685,793-812 2gpb d2gpba_ A:487-497,496-508,675-685,793-812 2qlm d2qlma1 A:487-497,496-508,675-685,793-812 1kti d1ktia_ A:487-497,496-508,675-685,793-812 1c8l d1c8la_ A:487-497,496-508,675-685,793-812 2qn8 d2qn8a1 A:487-497,496-508,675-685,793-812 2qrg d2qrga1 A:487-497,496-508,675-685,793-812 1ww2 d1ww2a1 A:487-497,496-508,675-685,793-812 2qn9 d2qn9a1 A:487-497,496-508,675-685,793-812 1noi d1noic_ C:487-497,496-508,675-685,793-812 1l7x d1l7xa_ A:487-497,496-508,675-685,793-812 2f3s d2f3sa1 A:487-497,496-508,675-685,793-812 1p4g d1p4ga_ A:487-497,496-508,675-685,793-812 2f3p d2f3pa1 A:487-497,496-508,675-685,793-812 2qrh d2qrha1 A:487-497,496-508,675-685,793-812 1p4h d1p4ha_ A:487-497,496-508,675-685,793-812 1xkx d1xkxa1 A:487-497,496-508,675-685,793-812 1p2d d1p2da_ A:487-497,496-508,675-685,793-812 1fc0 d1fc0b_ B:1487-1497,1496-1508,1675-1685,1793-1812 1nok d1noka_ A:487-497,496-508,675-685,793-812 1ww3 d1ww3a1 A:487-497,496-508,675-685,793-812 1fc0 d1fc0a_ A:487-497,496-508,675-685,793-812 2amv d2amva_ A:487-497,496-508,675-685,793-812 2qln d2qlna1 A:487-497,496-508,675-685,793-812 2off d2offa1 A:487-497,496-508,675-685,793-812 1e1y d1e1ya_ A:487-497,496-508,675-685,793-812 2qn1 d2qn1a1 A:487-497,496-508,675-685,793-812 3amv d3amva_ A:487-497,496-508,675-685,793-812 2f3q d2f3qa1 A:487-497,496-508,675-685,793-812 2qrm d2qrma1 A:487-497,496-508,675-685,793-812 2ieg d2iega1 A:487-497,496-508,675-685,793-812 1p2g d1p2ga_ A:487-497,496-508,675-685,793-812 1xc7 d1xc7a1 A:487-497,496-508,675-685,793-812 1p4j d1p4ja_ A:487-497,496-508,675-685,793-812 1xl1 d1xl1a1 A:487-497,496-508,675-685,793-812 2ff5 d2ff5a1 A:487-497,496-508,675-685,793-812 1l5r d1l5ra_ A:487-497,496-508,675-685,793-812 2f3u d2f3ua1 A:487-497,496-508,675-685,793-812 1gpb d1gpba_ A:487-497,496-508,675-685,793-812 2g9r d2g9ra1 A:487-497,496-508,675-685,793-812 2fet d2feta1 A:487-497,496-508,675-685,793-812 2g9v d2g9va1 A:487-497,496-508,675-685,793-812 3ceh d3cehb1 B:487-497,496-508,675-685,793-812 1l5q d1l5qb_ B:487-497,496-508,675-685,793-812 1l5r d1l5rb_ B:487-497,496-508,675-685,793-812 2g9u d2g9ua1 A:487-497,496-508,675-685,793-812 1z6p d1z6pa1 A:487-497,496-508,675-685,793-812 1l5q d1l5qa_ A:487-497,496-508,675-685,793-812 1lwo d1lwoa_ A:487-497,496-508,675-685,793-812 1b4d d1b4da_ A:487-497,496-508,675-685,793-812 3ceh d3ceha1 A:487-497,496-508,675-685,793-812 3cem d3cema1 A:487-497,496-508,675-685,793-812 1exv d1exva_ A:487-497,496-508,675-685,793-812 1em6 d1em6a_ A:487-497,496-508,675-685,793-812 1em6 d1em6b_ B:487-497,496-508,675-685,793-812 3cem d3cemb1 B:487-497,496-508,675-685,793-812 2gpa d2gpaa_ A:487-497,496-508,675-685,793-812 1l5s d1l5sb_ B:487-497,496-508,675-685,793-812 1z6q d1z6qa1 A:487-497,496-508,675-685,793-812 2ati d2atib1 B:487-497,496-508,675-685,793-812 1exv d1exvb_ B:487-497,496-508,675-685,793-812 2zb2 d2zb2b1 B:487-497,496-508,675-685,793-812 7gpb d7gpba_ A:487-497,496-508,675-685,793-812 1l7x d1l7xb_ B:487-497,496-508,675-685,793-812 1p29 d1p29a_ A:487-497,496-508,675-685,793-812 2zb2 d2zb2a1 A:487-497,496-508,675-685,793-812 1gpa d1gpab_ B:487-497,496-508,675-685,793-809 2asv d2asvb1 B:452-462,461-473,640-650,760-776 2av6 d2av6b1 B:452-462,461-473,640-650,760-776 2azd d2azdb1 B:452-462,461-473,640-650,760-776 2av6 d2av6a1 A:452-462,461-473,640-650,760-776 2azd d2azda1 A:452-462,461-473,640-650,760-776 1l5w d1l5wb_ B:452-462,461-473,640-650,760-776 2ecp d2ecpb_ B:487-497,496-508,675-685,793-809 2aw3 d2aw3b1 B:452-462,461-473,640-650,760-776 1l5v d1l5vb_ B:452-462,461-473,640-650,760-776 2asv d2asva1 A:452-462,461-473,640-650,760-776 1l6i d1l6ib_ B:452-462,461-473,640-650,760-776 1qm5 d1qm5a_ A:452-462,461-473,640-650,760-776 1qm5 d1qm5b_ B:452-462,461-473,640-650,760-776 1l5w d1l5wa_ A:452-462,461-473,640-650,760-776 1l6i d1l6ia_ A:452-462,461-473,640-650,760-776 1l5v d1l5va_ A:452-462,461-473,640-650,760-776 2aw3 d2aw3a1 A:452-462,461-473,640-650,760-776 9gpb d9gpba_ A:487-497,496-508,675-685,793-808 80. d.258.1 Chorismate synthase, AroC Chorismate synthase, AroC duplication: consists of two DCoH-like beta(2)-alpha-beta(2)-alpha structural repeats; 3 layers, beta/alpha/beta 1qxo d1qxoa_ A:28-42,132-154,176-188,342-367 1qxo d1qxob_ B:28-42,132-154,176-188,342-367 1qxo d1qxod_ D:28-42,132-154,176-188,342-367 1qxo d1qxoc_ C:28-42,132-154,176-188,342-367 1q1l d1q1la_ A:33-49,135-157,183-198,351-377 1q1l d1q1ld_ D:33-48,135-157,183-198,351-377 1q1l d1q1lb_ B:33-48,135-157,183-198,351-377 1q1l d1q1lc_ C:33-48,135-157,183-198,353-377 1umf d1umfc_ C:35-53,123-147,166-173,326-355 1um0 d1um0c_ C:35-53,123-147,166-173,326-355 1umf d1umfb_ B:35-48,122-147,166-173,326-355 1um0 d1um0a_ A:35-48,122-147,166-173,326-355 1um0 d1um0d_ D:35-48,124-147,166-173,326-355 1um0 d1um0b_ B:35-48,122-147,166-173,326-355 1umf d1umfd_ D:35-48,124-147,166-173,326-355 1r53 d1r53a_ A:35-48,128-148,180-188,341-371 1r52 d1r52c_ C:35-47,128-148,180-188,341-369 1r52 d1r52d_ D:35-47,128-148,180-188,341-369 1umf d1umfa_ A:35-48,123-147,166-173,326-355 1r52 d1r52a_ A:35-47,128-148,180-188,341-369 1r52 d1r52b_ B:35-47,128-148,180-188,341-369 1sq1 d1sq1a_ A:35-48,126-146,169-176,323-352 83. f.56.1 MAPEG domain-like MAPEG domain-like 4 helices, bundle; left-handed superhelix 2pno d2pnob1 B:2-34,59-75,75-101,100-131 2pno d2pnof1 F:2-34,59-75,75-101,100-131 2pno d2pnok1 K:2-34,59-75,75-101,100-131 2pno d2pnoi1 I:2-34,59-75,75-101,100-131 2pno d2pnol1 L:2-34,59-75,75-101,100-131 2pno d2pnoe1 E:2-34,59-75,75-101,100-131 2pno d2pnod1 D:2-34,59-75,75-101,100-131 2h8a d2h8aa1 A:9-33,62-96,98-124,125-147 2pno d2pnoc1 C:2-34,59-75,75-101,100-131 2pno d2pnog1 G:2-34,59-75,75-101,100-131 2pno d2pnof1 F:2-34,43-60,75-101,100-131 2pno d2pnoe1 E:2-34,43-60,75-101,100-131 2pno d2pnob1 B:2-34,43-60,75-101,100-131 2pno d2pnoc1 C:2-34,43-60,75-101,100-131 2pno d2pnol1 L:2-34,43-60,75-101,100-131 2pno d2pnog1 G:2-34,43-60,75-101,100-131 2pno d2pnok1 K:2-34,43-60,75-101,100-131 2pno d2pnoi1 I:2-34,43-60,75-101,100-131 2pno d2pnod1 D:2-34,43-60,75-101,100-131 2uuh d2uuha1 A:5-34,43-60,75-101,100-145 2pno d2pnoa1 A:2-34,59-75,75-101,100-147 2pno d2pnoh1 H:2-34,59-75,75-101,100-147 2uuh d2uuha1 A:5-34,59-75,75-101,100-145 2pno d2pnoj1 J:2-34,59-75,75-101,100-147 2pno d2pnoh1 H:2-34,43-60,75-101,100-147 2pno d2pnoa1 A:2-34,43-60,75-101,100-147 2q7m d2q7ma1 A:9-38,63-79,79-103,115-139 2pno d2pnoj1 J:2-34,43-60,75-101,100-147 2q7r d2q7rd1 D:9-38,63-79,79-103,115-143 2q7m d2q7me1 E:9-38,63-79,79-104,115-140 2q7r d2q7ra1 A:9-38,63-79,79-103,115-140 2q7r d2q7re1 E:9-38,63-79,79-104,115-140 2q7m d2q7md1 D:9-38,63-79,79-103,115-143 2q7r d2q7rf1 F:9-38,63-79,79-103,115-143 2q7m d2q7mf1 F:9-38,63-79,79-103,115-142 2q7m d2q7mb1 B:9-39,63-79,79-103,115-143 2q7m d2q7mc1 C:9-38,63-79,79-105,115-142 2q7r d2q7rb1 B:9-37,63-79,79-103,115-143 2q7r d2q7rc1 C:9-38,63-79,79-105,115-142 86. c.138.1 Indigoidine synthase A-like Indigoidine synthase A-like core: 3 layers, a/b/a; parallel beta-sheet of 7 strands, order 2134756 1vkm d1vkmd_ D:17-26,26-45,240-257,258-284 1vkm d1vkme_ E:17-26,26-45,240-257,258-284 1vkm d1vkmb_ B:17-26,26-45,240-257,258-284 1vkm d1vkma_ A:17-26,26-45,240-257,258-284 1vkm d1vkmc_ C:17-26,26-45,240-257,258-284 1vkm d1vkmf_ F:17-26,26-45,240-257,258-284 88. a.286.1 Sama2622-like Sama2622-like core: 6 helices; bundle; one central helix is surrounded by 5 others 2pv4 d2pv4a1 A:50-59,60-68,102-132,131-143 2pv4 d2pv4a1 A:50-59,68-88,102-132,131-143 2pv4 d2pv4a1 A:0-25,30-47,68-88,102-132 91. f.38.1 MFS general substrate transporter MFS general substrate transporter 12 transmembrane helices; duplication: the N- and C-terminal halves are structurally similar 2cfp d2cfpa1 A:6-39,41-60,86-102,103-137 2cfq d2cfqa1 A:6-39,41-60,86-102,103-137 1pv7 d1pv7b_ B:6-39,41-60,86-102,103-137 1pv7 d1pv7a_ A:6-39,41-60,86-102,103-137 1pv6 d1pv6b_ B:6-39,41-60,86-102,103-137 1pv6 d1pv6a_ A:6-39,41-60,86-102,103-137 2cfq d2cfqa1 A:242-252,253-279,287-309,311-330 1pw4 d1pw4a_ A:18-57,62-83,91-114,119-149 1pw4 d1pw4a_ A:252-276,287-303,320-342,347-377 1pw4 d1pw4a_ A:18-57,119-149,163-184,188-208 101. a.29.5 alpha-ketoacid dehydrogenase kinase, N-terminal domain Bromodomain-like 4 helices; bundle; minor mirror variant of up-and-down topology 2q8i d2q8ia1 A:13-23,41-67,74-97,101-122 1y8n d1y8na1 A:13-23,41-67,74-97,101-122 1y8o d1y8oa1 A:13-23,41-67,74-97,101-122 2pnr d2pnrb1 B:14-23,41-67,74-95,101-120 1jm6 d1jm6a1 A:1004-1019,1037-1063,1070-1093,1097-1118 1y8p d1y8pa1 A:12-23,41-67,74-97,101-122 2pnr d2pnrf1 F:14-23,41-67,74-95,101-120 2pnr d2pnre1 E:13-23,41-67,74-95,101-122 2pnr d2pnra1 A:13-23,41-67,74-95,101-122 1jm6 d1jm6b1 B:1004-1019,1037-1064,1070-1093,1097-1118 103. f.33.1 Calcium ATPase, transmembrane domain M Calcium ATPase, transmembrane domain M core: multihelical; consists of three transmembrane regions of 2, 2 and 6 helices, separated by cytoplasmic domains 1kju d1kjua4 A:49-59,84-117,247-281,287-308 1xp5 d1xp5a4 A:59-79,81-109,247-276,286-308 1su4 d1su4a4 A:739-782,788-810,845-859,893-918 1su4 d1su4a4 A:739-782,788-810,830-846,893-918 2zbe d2zbea4 A:59-79,83-118,247-275,292-308 1wpg d1wpgc4 C:59-79,83-112,247-276,287-308 1wpg d1wpgb4 B:59-79,83-112,247-276,287-308 1kju d1kjua4 A:739-782,788-809,830-852,893-918 1wpg d1wpga4 A:59-79,83-112,247-276,287-308 1wpg d1wpgd4 D:59-79,83-112,247-276,287-308 1kju d1kjua4 A:58-81,84-117,247-281,287-308 3b9r d3b9rb4 B:59-79,86-110,247-276,287-308 2zbe d2zbea4 A:739-782,788-810,830-856,893-918 2zbe d2zbeb4 B:739-782,788-810,830-856,893-918 2zbe d2zbeb4 B:59-79,80-118,247-282,292-308 3b9r d3b9ra4 A:59-79,86-112,247-277,287-308 3b9b d3b9ba4 A:739-782,788-810,830-859,893-918 2zbf d2zbfa4 A:59-79,86-112,247-282,290-308 1t5t d1t5ta4 A:739-782,788-810,830-859,893-918 1t5s d1t5sa4 A:739-782,788-810,830-859,893-918 1iwo d1iwob4 B:59-79,81-112,247-276,285-308 1iwo d1iwoa4 A:59-79,81-112,247-276,285-308 1wpg d1wpgd4 D:739-782,788-810,830-859,893-918 1wpg d1wpga4 A:739-782,788-810,830-859,893-918 1xp5 d1xp5a4 A:739-782,788-810,830-856,893-918 1vfp d1vfpa4 A:739-782,788-810,830-859,893-918 1vfp d1vfpb4 B:739-782,788-810,830-859,893-918 2zbg d2zbga4 A:739-782,788-810,830-859,893-918 2zbf d2zbfa4 A:739-782,788-810,830-859,893-918 1wpg d1wpgc4 C:739-782,788-810,830-859,893-918 1wpg d1wpgb4 B:739-782,788-810,830-859,893-918 1iwo d1iwob4 B:739-782,788-810,830-859,893-918 1iwo d1iwoa4 A:739-782,788-810,830-859,893-918 3b9r d3b9ra4 A:739-782,788-810,830-859,893-918 2zbg d2zbga4 A:59-79,86-112,247-282,287-308 3b9r d3b9rb4 B:739-782,788-810,830-859,893-918 3b9r d3b9ra4 A:59-79,86-112,247-277,308-330 2zbe d2zbea4 A:59-79,83-118,247-275,308-330 2zbd d2zbda4 A:739-782,788-810,830-860,893-918 1kju d1kjua4 A:49-59,84-117,247-281,308-328 1wpg d1wpgc4 C:59-79,83-112,247-276,308-330 1wpg d1wpgb4 B:59-79,83-112,247-276,308-330 2zbe d2zbea4 A:247-275,292-308,739-782,788-810 1wpg d1wpga4 A:59-79,83-112,247-276,308-330 1wpg d1wpgd4 D:59-79,83-112,247-276,308-330 1t5t d1t5ta4 A:59-79,83-124,247-276,287-308 3b9b d3b9ba4 A:59-79,84-120,247-280,290-308 3b9b d3b9ba4 A:59-79,84-120,247-280,308-330 1t5s d1t5sa4 A:59-79,83-124,247-276,287-308 2zbd d2zbda4 A:59-80,83-124,247-276,287-308 3b9r d3b9rb4 B:59-79,86-110,247-276,308-330 3b9r d3b9ra4 A:51-59,86-112,247-277,308-330 1vfp d1vfpa4 A:59-80,83-124,247-276,287-307 1vfp d1vfpb4 B:59-80,83-124,247-276,287-307 2zbd d2zbda4 A:247-276,287-308,739-782,788-810 2zbf d2zbfa4 A:59-79,86-112,247-282,308-330 1t5t d1t5ta4 A:247-276,287-308,739-782,788-810 2zbg d2zbga4 A:59-79,86-112,247-282,308-330 1vfp d1vfpa4 A:247-276,287-307,739-782,788-810 1vfp d1vfpb4 B:247-276,287-307,739-782,788-810 1t5s d1t5sa4 A:247-276,287-308,739-782,788-810 1su4 d1su4a4 A:247-281,287-308,739-782,788-810 2zbe d2zbeb4 B:59-79,80-118,247-282,308-330 1iwo d1iwob4 B:59-79,81-112,247-276,308-330 1iwo d1iwoa4 A:59-79,81-112,247-276,308-330 1t5t d1t5ta4 A:59-79,83-124,247-276,308-330 3b9r d3b9rb4 B:247-276,287-308,739-782,788-810 1wpg d1wpgc4 C:247-276,287-308,739-782,788-810 1wpg d1wpgb4 B:247-276,287-308,739-782,788-810 1t5s d1t5sa4 A:59-79,83-124,247-276,308-330 1wpg d1wpgd4 D:247-276,287-308,739-782,788-810 1wpg d1wpga4 A:247-276,287-308,739-782,788-810 2zbd d2zbda4 A:59-80,83-124,247-276,308-330 1xp5 d1xp5a4 A:59-79,81-109,247-276,308-330 1xp5 d1xp5a4 A:247-276,286-308,739-782,788-810 1kju d1kjua4 A:247-281,287-308,739-782,788-809 3b9r d3b9ra4 A:247-277,308-330,739-782,788-810 1vfp d1vfpb4 B:59-80,83-124,247-276,308-330 1vfp d1vfpa4 A:59-80,83-124,247-276,308-330 1iwo d1iwob4 B:247-276,285-308,739-782,788-810 1iwo d1iwoa4 A:247-276,285-308,739-782,788-810 2zbd d2zbda4 A:247-276,308-330,739-782,788-810 2zbe d2zbea4 A:247-275,308-330,739-782,788-810 3b9r d3b9rb4 B:247-276,308-330,739-782,788-810 1t5t d1t5ta4 A:247-276,308-330,739-782,788-810 1t5s d1t5sa4 A:247-276,308-330,739-782,788-810 1wpg d1wpgc4 C:247-276,308-330,739-782,788-810 1wpg d1wpgd4 D:247-276,308-330,739-782,788-810 1wpg d1wpgb4 B:247-276,308-330,739-782,788-810 1wpg d1wpga4 A:247-276,308-330,739-782,788-810 1kju d1kjua4 A:247-281,308-328,739-782,788-809 1iwo d1iwoa4 A:247-276,308-330,739-782,788-810 1iwo d1iwob4 B:247-276,308-330,739-782,788-810 2zbe d2zbeb4 B:247-282,292-308,739-782,788-810 1vfp d1vfpb4 B:247-276,308-330,739-782,788-810 3b9b d3b9ba4 A:247-280,308-330,739-782,788-810 1vfp d1vfpa4 A:247-276,308-330,739-782,788-810 3b9b d3b9ba4 A:49-60,84-120,247-280,308-330 1xp5 d1xp5a4 A:247-276,308-330,739-782,788-810 1su4 d1su4a4 A:48-80,84-123,247-281,310-330 2zbg d2zbga4 A:247-282,287-308,739-782,788-810 3b9b d3b9ba4 A:247-280,290-308,739-782,788-810 1su4 d1su4a4 A:247-281,310-330,739-782,788-810 2zbg d2zbga4 A:247-282,308-330,739-782,788-810 2zbe d2zbeb4 B:247-282,308-330,739-782,788-810 2zbf d2zbfa4 A:247-282,308-330,739-782,788-810 104. c.1.24 Pyridoxine 5'-phosphate synthase TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 1ixp d1ixpd_ D:10-21,26-38,215-223,226-243 1ixq d1ixqa_ A:10-21,26-38,215-226,226-243 1ixn d1ixna_ A:10-21,26-38,214-226,226-243 1ixn d1ixnc_ C:10-21,26-38,214-226,226-243 1ixn d1ixnb_ B:10-21,26-38,214-226,226-243 1ixn d1ixnd_ D:10-21,26-38,214-226,226-243 1ixq d1ixqc_ C:10-21,26-38,215-226,226-243 1m5w d1m5wg_ G:10-21,26-38,214-226,226-243 1ho1 d1ho1c_ C:10-21,26-38,215-226,226-243 1ixp d1ixpc_ C:10-21,26-38,214-226,226-243 1ho1 d1ho1d_ D:10-21,26-38,215-226,226-243 1ho1 d1ho1a_ A:10-21,26-38,215-226,226-243 1ixq d1ixqb_ B:10-21,26-38,215-226,226-243 1ixo d1ixob_ B:10-21,26-38,214-226,226-243 1ixo d1ixod_ D:10-21,26-38,214-226,226-243 1m5w d1m5wd_ D:10-21,26-38,214-226,226-243 1ixp d1ixpa_ A:10-21,26-38,214-226,226-243 1m5w d1m5wb_ B:10-21,26-38,214-226,226-243 1ho1 d1ho1b_ B:10-21,26-38,214-226,226-243 1ixo d1ixoa_ A:10-21,26-38,214-226,226-243 1ixo d1ixoc_ C:10-21,26-38,214-226,226-243 1ixq d1ixqd_ D:10-21,26-38,214-226,226-243 1ixp d1ixpb_ B:10-21,26-38,214-226,226-243 1ho4 d1ho4b_ B:10-21,26-38,214-226,226-243 1ho4 d1ho4d_ D:10-21,26-38,214-226,226-243 1m5w d1m5we_ E:10-21,26-38,214-226,226-243 1m5w d1m5wh_ H:10-21,26-38,214-226,226-243 1m5w d1m5wa_ A:10-21,26-38,214-226,226-243 1m5w d1m5wc_ C:10-21,26-38,214-226,226-243 1ho4 d1ho4a_ A:10-21,26-38,214-226,226-243 1ho4 d1ho4c_ C:10-21,26-38,214-226,226-243 1m5w d1m5wf_ F:10-21,26-38,214-226,226-243 115. a.216.1 I/LWEQ domain I/LWEQ domain 5 helices; bundle, closed, left-handed twist 1r0d d1r0db_ B:775-813,813-854,865-897,899-925 1r0d d1r0dh_ H:775-813,813-854,865-897,899-925 1r0d d1r0di_ I:775-813,813-854,865-897,899-925 1r0d d1r0de_ E:775-813,813-854,865-897,899-925 1r0d d1r0df_ F:775-813,813-854,865-897,899-925 1r0d d1r0dg_ G:775-813,813-854,865-897,899-925 1r0d d1r0da_ A:775-813,813-854,865-897,899-925 1r0d d1r0dd_ D:775-813,813-854,865-897,899-925 117. a.48.2 Transferrin receptor-like dimerisation domain N-cbl like 4 helices; bundle, left-handed twist; left-handed superhelix 1de4 d1de4i1 I:610-629,638-663,708-722,727-751 1de4 d1de4f1 F:610-629,638-663,708-722,727-751 1de4 d1de4c1 C:610-629,638-663,708-722,727-751 1cx8 d1cx8d1 D:610-629,638-664,708-722,727-750 1cx8 d1cx8g1 G:610-629,638-664,708-722,727-750 2or4 d2or4a1 A:596-619,628-653,705-713,720-748 1cx8 d1cx8e1 E:610-629,639-664,708-722,727-750 1cx8 d1cx8h1 H:610-629,639-664,708-722,727-750 1cx8 d1cx8f1 F:610-629,639-664,708-722,727-750 1cx8 d1cx8a1 A:610-629,639-664,708-722,727-750 2nsu d2nsua1 A:610-629,639-664,708-722,727-750 1cx8 d1cx8c1 C:610-629,639-664,708-722,727-750 1cx8 d1cx8b1 B:610-629,639-664,708-722,727-750 2nsu d2nsub1 B:610-629,639-664,708-722,727-750 2oot d2oota1 A:596-619,628-653,705-713,720-748 2pvw d2pvwa1 A:596-619,628-653,705-713,720-748 2cij d2cija1 A:596-619,628-653,705-713,720-748 1z8l d1z8la1 A:596-619,628-653,705-713,720-748 1z8l d1z8lc1 C:596-619,628-653,705-713,720-748 1z8l d1z8lb1 B:596-619,628-653,705-713,720-748 1z8l d1z8ld1 D:596-619,628-653,705-713,720-748 2pvv d2pvva1 A:596-619,628-653,705-713,720-748 2c6g d2c6ga1 A:596-619,628-653,705-713,720-748 2c6p d2c6pa1 A:596-619,628-653,705-713,720-748 2c6c d2c6ca1 A:596-619,628-653,705-713,720-748 2jbk d2jbka1 A:596-619,628-653,705-713,720-748 3bhx d3bhxa1 A:596-619,628-653,705-713,720-747 3bi0 d3bi0a1 A:596-619,628-653,705-713,720-747 3bi1 d3bi1a1 A:596-619,628-653,705-713,720-747 2jbj d2jbja1 A:596-619,628-653,705-713,720-747 1de4 d1de4i1 I:610-629,638-663,667-687,727-751 1de4 d1de4f1 F:610-629,638-663,667-687,727-751 1de4 d1de4c1 C:610-629,638-663,667-687,727-751 1cx8 d1cx8g1 G:610-629,638-664,667-686,727-750 1cx8 d1cx8d1 D:610-629,638-664,667-686,727-750 1cx8 d1cx8e1 E:610-629,639-664,667-686,727-750 2nsu d2nsub1 B:610-629,639-664,667-686,727-750 1cx8 d1cx8b1 B:610-629,639-664,667-686,727-750 1cx8 d1cx8f1 F:610-629,639-664,667-686,727-750 1cx8 d1cx8h1 H:610-629,639-664,667-686,727-750 1cx8 d1cx8a1 A:610-629,639-664,667-686,727-750 2nsu d2nsua1 A:610-629,639-664,667-686,727-750 1cx8 d1cx8c1 C:610-629,639-664,667-686,727-750 2or4 d2or4a1 A:596-619,628-653,657-677,720-748 2oot d2oota1 A:596-619,628-653,657-677,720-748 2pvw d2pvwa1 A:596-619,628-653,657-677,720-748 2pvv d2pvva1 A:596-619,628-653,657-677,720-748 2cij d2cija1 A:596-619,628-653,657-676,720-748 2c6c d2c6ca1 A:596-619,628-653,657-676,720-748 1z8l d1z8lc1 C:596-619,628-653,657-676,720-748 1z8l d1z8la1 A:596-619,628-653,657-676,720-748 1z8l d1z8lb1 B:596-619,628-653,657-676,720-748 1z8l d1z8ld1 D:596-619,628-653,657-676,720-748 2c6g d2c6ga1 A:596-619,628-653,657-676,720-748 2c6p d2c6pa1 A:596-619,628-653,657-676,720-748 2jbk d2jbka1 A:596-619,628-653,657-676,720-748 3bhx d3bhxa1 A:596-619,628-653,657-677,720-747 3bi0 d3bi0a1 A:596-619,628-653,657-677,720-747 3bi1 d3bi1a1 A:596-619,628-653,657-677,720-747 2jbj d2jbja1 A:596-619,628-653,657-676,720-747 118. a.24.25 TrmE connector domain Four-helical up-and-down bundle core: 4 helices; bundle, closed or partly opened, left-handed twist; up-and-down 1xzp d1xzpa1 A:119-132,134-147,180-211,371-381 1xzq d1xzqa1 A:119-132,134-147,180-211,371-381 120. a.124.1 Phospholipase C/P1 nuclease duplication: all chain but the N-terminal helix forms two structural repeats ! Phospholipase C/P1 nuclease multihelical 1qmd d1qmda1 A:113-134,149-159,184-209,213-246 1qmd d1qmdb1 B:113-134,149-159,184-209,213-246 1gyg d1gyga1 A:113-134,149-159,184-209,213-246 1gyg d1gygb1 B:113-134,149-159,184-209,213-246 1qm6 d1qm6b1 B:113-134,149-159,184-209,213-246 1qm6 d1qm6a1 A:113-134,149-159,184-209,213-246 1ca1 d1ca1a1 A:113-134,145-159,184-209,213-246 1olp d1olpa1 A:113-134,145-159,184-209,213-245 1olp d1olpd1 D:113-134,145-159,184-209,213-245 1olp d1olpb1 B:113-134,145-159,184-209,213-246 1kho d1khob1 B:113-134,145-159,184-209,213-246 1kho d1khoa1 A:113-134,145-159,184-209,213-246 1olp d1olpc1 C:113-134,145-159,184-209,213-246 1p6d d1p6da_ A:105-126,138-153,171-192,205-244 1p5x d1p5xa_ A:105-126,138-153,171-192,205-244 1p6e d1p6ea_ A:105-126,138-153,171-192,205-244 1ah7 d1ah7a_ A:105-126,138-153,171-192,205-244 124. f.54.1 SNF-like SNF-like 12 transmembrane helices; duplication: consists of two structurally similar halves 2q6h d2q6ha1 A:222-232,274-307,307-318,320-335 2a65 d2a65a1 A:222-232,274-307,307-318,318-335 2qju d2qjua1 A:222-232,274-307,307-319,318-335 2qb4 d2qb4a1 A:222-232,274-307,307-319,318-335 2q72 d2q72a1 A:222-232,274-307,307-319,318-335 2q6h d2q6ha1 A:186-216,222-232,274-307,307-318 127. f.49.1 Proton glutamate symport protein Proton glutamate symport protein multihelical membrane protein; partial structural duplication in the C-terminal region; oligomeric state: trimer 2nwx d2nwxb1 B:173-225,277-293,295-307,389-416 2nwx d2nwxc1 C:173-225,277-293,295-307,389-416 2nwx d2nwxa1 A:173-225,277-293,295-307,389-416 2nww d2nwwc1 C:173-225,277-293,295-311,389-416 2nww d2nwwa1 A:173-225,277-293,295-311,389-416 129. f.29.1 Photosystem I subunits PsaA/PsaB Photosystem I subunits PsaA/PsaB core:11 transmembrane helices 1jb0 d1jb0a_ A:532-563,590-622,637-646,645-665 1jb0 d1jb0b_ B:519-549,577-610,611-622,621-640 130. a.172.1 Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA multihelical; consists of 2 all-alpha subdomains 1m6n d1m6na2 A:622-644,680-704,704-738,747-778 1m74 d1m74a2 A:622-644,680-704,704-738,747-778 1tf2 d1tf2a2 A:622-644,680-704,704-738,747-778 1tf5 d1tf5a2 A:622-644,680-705,704-738,747-778 1nkt d1nktb2 B:667-689,735-759,761-793,802-833 1nl3 d1nl3a2 A:668-689,732-759,761-793,802-833 1nkt d1nkta2 A:667-689,735-759,761-793,802-833 1nl3 d1nl3b2 B:667-689,733-758,761-793,802-833 131. a.227.1 ERO1-like similar active site architecture to ERO1-like multihelical; consists of 2 four-helical bundles 1rq1 d1rq1a_ A:192-208,215-242,352-379,392-424 1rq1 d1rq1a_ A:264-289,299-314,352-379,392-424 1rp4 d1rp4a_ A:192-207,215-242,352-379,392-427 1rp4 d1rp4a_ A:264-289,299-314,352-379,392-427