1. c.8.2 LeuD/IlvD-like contains mixed beta-sheet barrel, closed n=7, S=10 !
The "swivelling" beta/beta/alpha domain 3 layers: b/b/a; the central sheet is parallel, and the other one is antiparallel; there are some variations in topology ! this domain is thought to be mobile in most multi-domain proteins known to contain it
1b0j d1b0ja1 A:551-562,604-609,610-615,615-627
1nit d1nita1 A:551-562,604-609,610-615,615-627
8acn d8acna1 A:551-562,604-609,610-615,615-627
1ami d1amia1 A:551-562,604-609,610-615,615-627
1nis d1nisa1 A:551-562,604-609,610-615,615-627
1aco d1acoa1 A:551-562,604-609,610-615,615-627
1amj d1amja1 A:551-562,604-609,610-615,615-627
7acn d7acna1 A:551-562,604-609,610-615,615-627
1b0k d1b0ka1 A:551-562,603-609,610-615,615-627
1c96 d1c96a1 A:551-563,603-609,610-615,615-627
1c97 d1c97a1 A:551-562,603-609,610-615,615-627
5acn d5acna1 A:551-562,604-609,610-615,615-627
1fgh d1fgha1 A:551-563,604-609,610-615,615-627
1b0m d1b0ma1 A:551-562,604-608,611-615,615-627
6acn d6acna1 A:551-562,604-608,611-615,615-627
2b3y d2b3yb1 B:664-674,740-745,746-751,751-763
2b3y d2b3ya1 A:664-674,740-745,746-751,751-763
2b3x d2b3xa1 A:666-674,740-745,746-751,751-763
2. c.14.1 ClpP/crotonase
ClpP/crotonase core: 4 turns of (beta-beta-alpha)n superhelix
1tyf d1tyff_ F:110-114,117-122,171-175,175-183
1rjn d1rjna_ A:170-176,179-183,216-220,220-228
1rjn d1rjnb_ B:170-176,179-183,216-220,220-228
1rjn d1rjnc_ C:170-176,179-183,216-220,220-228
1yg8 d1yg8m1 M:110-115,117-123,169-175,175-183
1q51 d1q51j_ J:170-176,179-183,216-220,220-228
1rjm d1rjmb_ B:170-176,179-183,216-220,220-228
1rjm d1rjma_ A:170-176,179-183,216-220,220-228
1rjm d1rjmc_ C:170-176,179-183,216-220,220-228
1q52 d1q52b_ B:170-176,179-183,216-220,220-228
1q52 d1q52d_ D:170-176,179-183,216-220,220-228
1q52 d1q52j_ J:170-176,179-183,216-220,220-228
1yg6 d1yg6l1 L:110-114,117-122,171-175,175-183
1q52 d1q52a_ A:170-176,179-183,216-220,220-228
1q51 d1q51e_ E:170-176,179-183,216-220,220-228
1q51 d1q51f_ F:170-176,179-183,216-220,220-228
1uiy d1uiya_ A:117-123,125-129,161-165,165-173
1q51 d1q51a_ A:170-176,179-183,216-220,220-228
1q51 d1q51h_ H:170-176,179-183,216-220,220-228
1tyf d1tyfn_ N:110-114,117-122,171-175,175-183
1q51 d1q51d_ D:170-176,179-183,216-220,220-228
1q52 d1q52k_ K:170-176,179-183,216-220,220-228
1q51 d1q51c_ C:170-176,179-183,216-220,220-228
1yg8 d1yg8j1 J:110-114,117-123,169-175,175-183
1q52 d1q52e_ E:170-176,179-183,216-220,220-228
1tyf d1tyfj_ J:110-114,117-122,171-175,175-183
1q52 d1q52c_ C:170-176,179-183,216-220,220-228
1q52 d1q52g_ G:170-176,179-183,216-220,220-228
1q51 d1q51k_ K:170-176,179-183,216-220,220-228
1q51 d1q51i_ I:170-176,179-183,216-220,220-228
1tyf d1tyfi_ I:110-114,117-122,171-175,175-183
1q52 d1q52l_ L:170-176,179-183,216-220,220-228
1tyf d1tyfa_ A:110-114,117-122,171-175,175-183
1q52 d1q52i_ I:170-176,179-183,216-220,220-228
1q51 d1q51l_ L:170-176,179-183,216-220,220-228
1yg8 d1yg8t1 T:110-115,117-123,169-175,175-183
1tyf d1tyfd_ D:110-115,117-123,170-175,175-183
1q51 d1q51g_ G:170-176,179-183,216-220,220-228
1tyf d1tyfm_ M:110-114,117-122,171-175,175-183
1tyf d1tyfb_ B:110-115,117-122,171-175,175-183
1q51 d1q51b_ B:170-176,179-183,216-220,220-228
1yg8 d1yg8v1 V:110-115,117-123,169-175,175-183
1q52 d1q52h_ H:170-176,179-183,216-220,220-228
1q52 d1q52f_ F:170-176,179-183,216-220,220-228
2cby d2cbye1 E:111-115,118-123,172-176,176-184
1yg8 d1yg8g1 G:110-115,117-122,171-175,175-183
1yg8 d1yg8i1 I:110-115,117-122,171-175,175-183
1yg8 d1yg8f1 F:110-115,117-122,171-175,175-183
2ce3 d2ce3c1 C:111-115,118-123,172-176,176-184
2cby d2cbya1 A:111-115,118-123,172-176,176-184
2ce3 d2ce3g1 G:111-115,118-123,172-176,176-184
1yg8 d1yg8u1 U:110-115,117-123,169-175,175-183
1tyf d1tyfc_ C:110-115,117-122,171-175,175-183
2ce3 d2ce3k1 K:111-115,118-123,172-176,176-184
1yg8 d1yg8c1 C:110-115,117-122,171-175,175-183
2cby d2cbyf1 F:111-116,118-123,172-176,176-184
3. c.124.1 NagB/RpiA/CoA transferase-like
NagB/RpiA/CoA transferase-like core: 3 layers: a/b/a; parallel or mixed beta-sheet of 6 strands, order 321456
1xr4 d1xr4a2 A:368-372,432-437,438-443,462-475
1xr4 d1xr4b2 B:368-372,432-437,438-443,462-475
2a0u d2a0ub1 B:265-269,355-361,362-366,375-382
2g39 d2g39a2 A:358-362,424-429,430-435,439-452
2g39 d2g39b2 B:358-362,424-429,430-435,439-452
2a0u d2a0ua1 A:265-269,355-361,362-366,375-383
1t9k d1t9kc_ C:234-238,320-325,326-330,332-342
1t9k d1t9kd_ D:234-238,320-325,326-330,332-342
1t9k d1t9kb_ B:234-238,320-325,326-330,332-342
1t5o d1t5ob_ B:234-238,318-323,324-328,330-340
1t9k d1t9ka_ A:234-238,320-325,326-330,332-342
1t5o d1t5oc_ C:234-238,318-323,324-328,330-340
1t5o d1t5od_ D:234-238,318-323,324-328,330-340
2o0m d2o0ma1 A:237-243,269-273,274-279,312-323
4. b.55.1 PH domain-like
PH domain-like barrel barrel, partly opened; n*=6, S*=12; meander; capped by an alpha-helix
2gcl d2gclb1 B:242-252,325-330,347-352,352-366
2gcl d2gcla1 A:242-252,325-330,347-352,352-366
2gcj d2gcjc1 C:242-252,325-330,347-352,352-366
2gcj d2gcjb1 B:242-252,325-330,347-352,352-366
2gcj d2gcjd1 D:242-252,325-330,347-352,352-366
2gcj d2gcja1 A:242-252,325-330,347-352,352-366
2gcl d2gcla1 A:314-322,325-330,347-352,352-366
2gcl d2gclb1 B:314-322,325-330,347-352,352-366
5. d.153.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) N-terminal residue provides two catalytic groups, nucleophile and proton donor !
Ntn hydrolase-like 4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
3pva d3pvaa_ A:34-40,65-73,75-83,101-113
3pva d3pvab_ B:34-40,65-73,75-83,101-113
1te5 d1te5a_ A:16-21,33-44,45-54,59-69
3pva d3pvaf_ F:34-40,65-73,75-83,101-113
3pva d3pvac_ C:34-40,65-73,75-83,101-113
3pva d3pvae_ E:34-40,65-73,75-83,101-113
3pva d3pvah_ H:34-40,65-73,75-83,101-113
3pva d3pvag_ G:34-40,65-73,75-83,101-113
3pva d3pvad_ D:34-40,65-73,75-83,101-113
2pva d2pvab_ B:34-40,65-73,75-83,101-113
2pva d2pvad_ D:34-40,65-73,75-83,101-113
6. e.3.1 beta-lactamase/transpeptidase-like
beta-lactamase/transpeptidase-like contains a cluster of helices and an alpha+beta sandwich
2olv d2olvb2 B:420-425,426-430,431-435,455-471
2olu d2olua2 A:420-425,426-430,431-435,455-471
2olv d2olva2 A:420-425,426-430,431-435,455-471
7. b.66.1 Hemopexin-like domain
4-bladed beta-propeller consists of four 4-stranded beta-sheet motifs; meander
1qhu d1qhua1 A:42-49,166-172,173-180,200-207
1qjs d1qjsa1 A:42-49,166-172,173-180,200-207
1qjs d1qjsb1 B:42-49,166-172,173-180,200-207
1ck7 d1ck7a1 A:483-490,618-622,627-634,652-659
1gen d1gena_ A:483-490,618-622,627-634,652-659
1gxd d1gxda2 A:454-461,588-593,598-605,623-630
1gxd d1gxdb2 B:454-461,589-593,598-605,623-630
8. c.2.1 NAD(P)-binding Rossmann-fold domains
NAD(P)-binding Rossmann-fold domains core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456 ! The nucleotide-binding modes of this and the next two folds/superfamilies are similar
2dt5 d2dt5b2 B:104-112,118-123,124-128,129-138
2dt5 d2dt5a2 A:104-112,118-123,124-128,129-138
1xcb d1xcbf2 F:104-112,118-123,124-128,129-141
1xcb d1xcbd2 D:104-112,118-123,124-128,129-138
1xcb d1xcbg2 G:104-112,118-123,124-128,129-138
1xcb d1xcbb2 B:104-112,118-123,124-128,129-138
1efl d1efla1 A:440-446,451-455,457-461,503-510
9. b.122.1 PUA domain-like
PUA domain-like pseudobarrel; mixed folded sheet of 5 strands; order 13452; strand 1 and 3 are parallel to each other
2rfk d2rfka1 A:276-282,283-287,306-310,309-316
2gmq d2gmqb1 B:22-29,62-69,70-77,104-113
2gmq d2gmqa1 A:22-29,62-69,70-77,104-113
10. c.40.1 Methylesterase CheB, C-terminal domain
Methylesterase CheB, C-terminal domain 3 layers: a/b/a, parallel beta-sheet of 7 strands, order 3421567
1a2o d1a2oa2 A:183-190,216-220,241-249,259-272
1chd d1chda_ A:184-190,216-220,241-249,259-272
11. d.96.2 ApbE-like duplication: contains two differently decorated beta(2)-alpha(2)-beta(2) subdomains, similar to other T-fold domains; probably does not form the tunnel-shaped oligomers !
T-fold beta(2)-alpha(2)-beta(2); 2 layers: alpha/beta; antiparallel sheet 1234 ! tunnel-shaped: its known members form wide oligomeric barrels different sizes
1vrm d1vrma1 A:233-240,288-297,329-336,343-352
12. b.39.1 Ribosomal protein L14
Ribosomal protein L14 barrel, closed; n=5, S=8, meander
2hgq d2hgqn1 N:60-64,67-71,73-79,102-109
13. c.92.2 "Helical backbone" metal receptor contains a long alpha helical insertion in the interdomain linker !
Chelatase-like duplication: tandem repeat of two domains; 3 layers (a/b/a); parallel beta-sheet of 4 strands, order 2134
1n4d d1n4db_ B:1133-1140,1144-1149,1173-1178,1179-1186
1n4a d1n4aa_ A:133-139,145-149,173-177,178-186
1n2z d1n2zb_ B:155-161,167-171,195-199,200-208
1n4a d1n4ab_ B:5133-5139,5145-5149,5173-5177,5178-5186
2qi9 d2qi9f1 F:155-161,167-171,195-199,200-208
1n2z d1n2za_ A:155-161,166-171,195-199,200-208
14. b.1.2 Fibronectin type III
Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
1w0y d1w0yt1 T:19-26,33-41,42-49,58-67
1wv7 d1wv7t1 T:19-26,32-41,42-49,59-67
1jps d1jpst1 T:19-26,31-40,44-53,59-67
1wss d1wsst1 T:19-26,32-41,42-49,59-67
1w2k d1w2kt1 T:19-26,33-41,42-49,58-67
2zp0 d2zp0t1 T:19-26,32-41,42-49,58-67
1j9c d1j9ct1 T:19-26,31-41,42-49,59-67
1wqv d1wqvt1 T:19-26,32-41,42-49,58-67
1wtg d1wtgt1 T:19-26,32-41,42-49,58-67
1ahw d1ahwf1 F:19-26,31-41,43-53,59-67
1wun d1wunt1 T:19-26,32-41,42-49,58-67
2a2q d2a2qt1 T:19-26,31-41,42-49,58-67
2aer d2aert1 T:19-26,31-41,42-49,58-67
1z6j d1z6jt1 T:19-26,31-41,42-49,58-67
2aei d2aeit1 T:19-26,31-41,42-48,58-67
1a21 d1a21a1 A:17-24,29-39,40-51,57-65
2hft d2hfta1 A:19-26,31-41,42-53,59-67
2fir d2firt1 T:19-26,31-41,42-49,58-67
2b8o d2b8ot1 T:19-26,31-41,42-53,59-67
2flb d2flbt1 T:19-26,31-41,42-53,59-67
2flr d2flrt1 T:19-27,31-41,42-49,58-67
1fak d1fakt1 T:19-27,31-41,42-49,58-67
1boy d1boya1 A:19-26,31-41,42-53,58-67
1dan d1dan.1 T:19-26,31-41,42-49,58-67
2b7d d2b7dt1 T:19-27,31-41,42-49,58-67
2f9b d2f9bt1 T:19-27,31-41,42-49,58-67
1o5d d1o5dt1 T:19-27,31-41,42-53,59-67
1tfh d1tfhb1 B:19-26,31-41,42-53,59-67
1tfh d1tfha1 A:19-26,31-41,42-53,59-67
1uj3 d1uj3c1 C:619-626,631-641,645-653,659-667
15. b.76.1 Outer surface protein 21 stranded sheet partly folded upon itself at the ends !
open-sided beta-meander single sheet formed by beta-hairpin repeats; exposed on both sides in the middle
1p4p d1p4pa_ A:209-217,243-251,252-262,287-296
1fj1 d1fj1e_ E:184-193,220-228,229-239,264-273
1fj1 d1fj1f_ F:184-193,220-228,229-239,264-273
1rjl d1rjlc_ C:209-218,243-251,252-262,287-296
1osp d1ospo_ O:184-193,220-228,229-239,264-273
16. b.86.1 Hedgehog/intein (Hint) domain duplication: contains two intertwined structural repeats !
Hedgehog/intein (Hint) domain complex fold made of five beta-hairpin units and a b-ribbon arc
1ef0 d1ef0b1 B:71-77,79-87,153-161,160-168
1lws d1lwsa1 A:71-77,79-87,153-161,160-168
1lwt d1lwta1 A:71-77,79-87,153-161,160-168
1gpp d1gppa_ A:71-77,79-87,153-161,160-168
1vde d1vdea1 A:71-77,79-87,153-161,160-168
1um2 d1um2b1 B:354-360,362-370,436-444,443-451
1vde d1vdeb1 B:71-77,79-87,153-161,160-168
1um2 d1um2a1 A:354-360,362-370,436-444,443-451
1ef0 d1ef0a1 A:71-77,79-87,153-161,160-168
1jva d1jvab1 B:354-360,362-370,436-444,443-451
1dfa d1dfaa1 A:71-77,79-87,153-161,160-168
17. d.17.4 NTF2-like has a beta-alpha(2)-beta insertion after the main helix !
Cystatin-like Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet
2gex d2gexa1 A:74-88,87-91,92-96,135-147
18. d.369.1 SMI1/KNR4-like
SMI1/KNR4-like alpha(4)-beta(4)-alpha; 3 layers: a/b/a; antiparallel beta-sheet, order 1234(meander)
2icg d2icga1 A:60-64,95-102,105-112,142-158
19. d.159.1 Metallo-dependent phosphatases different families of this superfamily are groupped in a single Pfam family,
Metallo-dependent phosphatases 4 layers: alpha/beta/beta/alpha; mixed beta sheets; contains duplication
1xm7 d1xm7a_ A:0-7,97-103,104-112,178-186
1xm7 d1xm7b_ B:0-7,97-103,104-112,178-186
20. b.67.2 Arabinanase/levansucrase/invertase
5-bladed beta-propeller consists of five 4-stranded beta-sheet motifs; meander
2b4w d2b4wa1 A:109-118,143-152,157-165,171-178
21. i.6.1 Viruses and virus-receptor complexes
Viruses and virus-receptor complexes
1gw7 d1gw7d_ D:1285-1294,1302-1311,1314-1320,1320-1333
1hb7 d1hb7j_ J:285-294,302-311,314-320,320-333
1gw7 d1gw7j_ J:1285-1294,1302-1311,1314-1320,1320-1333
1gw8 d1gw8j_ J:1285-1294,1302-1311,1314-1320,1320-1333
1gw8 d1gw8d_ D:1285-1294,1302-1311,1314-1320,1320-1333
1hb7 d1hb7a_ A:285-294,302-311,314-320,320-333
1gw8 d1gw8g_ G:1285-1294,1302-1311,1314-1320,1320-1333
1gw8 d1gw8a_ A:1285-1294,1302-1311,1314-1320,1320-1333
1gw7 d1gw7a_ A:1285-1294,1302-1311,1314-1320,1320-1333
1hb7 d1hb7d_ D:285-294,302-311,314-320,320-333
1w8x d1w8xb_ B:285-294,302-311,314-320,320-333
1hb7 d1hb7g_ G:285-294,302-311,314-320,320-333
1gw7 d1gw7g_ G:1285-1294,1302-1311,1314-1320,1320-1333
1w8x d1w8xd_ D:285-294,302-311,314-320,320-333
1w8x d1w8xi_ I:285-294,302-311,314-320,320-333
1w8x d1w8xh_ H:282-294,302-311,314-320,320-333
1w8x d1w8xj_ J:282-294,302-311,314-320,320-333
1hb9 d1hb9d_ D:63-80,95-104,107-113,113-126
1hb9 d1hb9a_ A:63-80,95-104,107-113,113-126
1hb5 d1hb5a_ A:63-80,95-104,107-113,113-126
1hb9 d1hb9g_ G:63-80,95-104,107-113,113-126
1hb9 d1hb9j_ J:63-80,95-104,107-113,113-126
1hb5 d1hb5d_ D:63-80,95-104,107-113,113-126
1hb5 d1hb5g_ G:63-80,95-104,107-113,113-126
1gw8 d1gw8a_ A:1063-1080,1095-1104,1107-1113,1113-1126
1w8x d1w8xb_ B:63-80,95-104,107-113,113-126
1w8x d1w8xh_ H:63-80,95-104,107-113,113-126
1w8x d1w8xg_ G:63-80,95-104,107-113,113-126
1hb7 d1hb7g_ G:63-80,95-104,107-113,113-126
1hb7 d1hb7a_ A:63-80,95-104,107-113,113-126
1hb7 d1hb7j_ J:63-80,95-104,107-113,113-126
1w8x d1w8xa_ A:63-80,95-104,107-113,113-126
1gw8 d1gw8g_ G:1063-1080,1095-1104,1107-1113,1113-1126
1w8x d1w8xd_ D:63-80,95-104,107-113,113-126
1hb9 d1hb9b_ B:63-80,95-104,107-113,113-126
1hb9 d1hb9e_ E:63-80,95-104,107-113,113-126
1hb5 d1hb5b_ B:63-80,95-104,107-113,113-126
1gw8 d1gw8j_ J:1063-1080,1095-1104,1107-1113,1113-1126
1hb5 d1hb5h_ H:63-80,95-104,107-113,113-126
1hb7 d1hb7d_ D:63-80,95-104,107-113,113-126
1w8x d1w8xj_ J:63-80,95-104,107-113,113-126
1gw7 d1gw7j_ J:1063-1080,1095-1104,1107-1113,1113-1126
1gw7 d1gw7a_ A:1063-1080,1095-1104,1107-1113,1113-1126
1hb9 d1hb9h_ H:63-80,95-104,107-113,113-126
1hb5 d1hb5e_ E:63-80,95-104,107-113,113-126
1w8x d1w8xi_ I:63-80,95-104,107-113,113-126
1hb9 d1hb9k_ K:63-80,95-104,107-113,113-126
1gw7 d1gw7g_ G:1063-1080,1095-1104,1107-1113,1113-1126
1gw8 d1gw8d_ D:1063-1080,1095-1104,1107-1113,1113-1126
1gw7 d1gw7h_ H:2063-2080,2095-2104,2107-2113,2113-2126
1gw7 d1gw7d_ D:1063-1080,1095-1104,1107-1113,1113-1126
1gw7 d1gw7b_ B:2063-2080,2095-2104,2107-2113,2113-2126
1hb7 d1hb7b_ B:63-80,95-104,107-113,113-126
1gw8 d1gw8b_ B:2063-2080,2095-2104,2107-2113,2113-2126
1gw7 d1gw7e_ E:2063-2080,2095-2104,2107-2113,2113-2126
1gw8 d1gw8h_ H:2063-2080,2095-2104,2107-2113,2113-2126
1gw8 d1gw8e_ E:2063-2080,2095-2104,2107-2113,2113-2126
1hb7 d1hb7e_ E:63-80,95-104,107-113,113-126
1hb7 d1hb7k_ K:63-80,95-104,107-113,113-126
1hb7 d1hb7l_ L:63-80,95-104,107-113,113-126
1hb7 d1hb7h_ H:63-80,95-104,107-113,113-126
1gw8 d1gw8l_ L:3063-3080,3095-3104,3107-3113,3113-3126
1gw7 d1gw7c_ C:3063-3080,3095-3104,3107-3113,3113-3126
1gw7 d1gw7k_ K:2063-2080,2095-2104,2107-2113,2113-2126
1gw8 d1gw8k_ K:2063-2080,2095-2104,2107-2113,2113-2126
1hb7 d1hb7f_ F:63-80,95-104,107-113,113-126
1w8x d1w8xe_ E:63-80,95-104,107-113,113-126
1w8x d1w8xk_ K:63-80,95-104,107-113,113-126
1hb7 d1hb7c_ C:63-80,95-104,107-113,113-126
1w8x d1w8xf_ F:63-80,95-104,107-113,113-126
1hb7 d1hb7i_ I:63-80,95-104,107-113,113-126
1gw8 d1gw8c_ C:3063-3080,3095-3104,3107-3113,3113-3126
1gw8 d1gw8i_ I:3063-3080,3095-3104,3107-3113,3113-3126
1gw7 d1gw7f_ F:3063-3080,3095-3104,3107-3113,3113-3126
1gw8 d1gw8f_ F:3063-3080,3095-3104,3107-3113,3113-3126
1w8x d1w8xc_ C:63-80,95-104,107-113,113-126
1gw7 d1gw7l_ L:3063-3080,3095-3104,3107-3113,3113-3126
1gw7 d1gw7i_ I:3063-3080,3095-3104,3107-3113,3113-3126
1hb5 d1hb5f_ F:63-80,95-104,107-113,113-126
1hb9 d1hb9i_ I:63-80,95-104,107-113,113-126
1hb9 d1hb9l_ L:63-80,95-104,107-113,113-126
1hb5 d1hb5i_ I:63-80,95-104,107-113,113-126
1hb9 d1hb9f_ F:63-80,95-104,107-113,113-126
1hb9 d1hb9c_ C:63-80,95-104,107-113,113-126
1hb5 d1hb5c_ C:63-80,95-104,107-113,113-126
22. c.94.1 Periplasmic binding protein-like II Similar in architecture to the superfamily I but partly differs in topology !
Periplasmic binding protein-like II consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication ! mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
1uiu d1uiub_ B:1037-1042,1061-1068,1116-1122,1126-1135
1uiu d1uiua_ A:37-42,61-68,116-122,126-135
3e3k d3e3ka1 A:37-42,61-68,116-122,126-135
3e3k d3e3kb1 B:37-42,61-68,116-122,126-135
3dp8 d3dp8a1 A:37-42,61-68,116-122,126-135
3dp8 d3dp8b1 B:37-42,61-68,116-122,126-135
1zlq d1zlqa1 A:37-42,61-68,116-122,128-135
1uiv d1uivb_ B:1037-1042,1061-1068,1116-1122,1128-1135
3dp8 d3dp8c1 C:37-42,61-67,116-122,128-135
1xoc d1xoca1 A:56-61,80-87,135-142,145-157
1zlq d1zlqb1 B:37-42,61-68,116-122,128-135
1uiv d1uiva_ A:37-42,61-68,116-122,128-135
3e3k d3e3kc1 C:37-42,61-67,116-123,128-135
23. b.121.2 Group II dsDNA viruses VP duplication: consists of two domains of this fold packed together like the nucleoplasmin subunits ! trimeric; in the trimers, the domains are arranged around pseudo six-fold axis !
Nucleoplasmin-like/VP (viral coat and capsid proteins) sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands ! characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
1hqn d1hqna2 A:282-294,302-311,314-320,320-333
1cjd d1cjda2 A:282-294,302-311,314-320,320-333
1hqn d1hqnc2 C:282-294,302-311,314-320,320-333
1hx6 d1hx6a1 A:63-80,95-104,107-113,113-126
1cjd d1cjdb1 B:63-80,95-104,107-113,113-126
1cjd d1cjdc1 C:63-80,95-104,107-113,113-126
1hqn d1hqnc1 C:63-80,95-104,107-113,113-126
1cjd d1cjda1 A:63-80,95-104,107-113,113-126
1hx6 d1hx6b1 B:63-80,95-104,107-113,113-126
1hx6 d1hx6c1 C:63-80,95-104,107-113,113-126
1hqn d1hqna1 A:63-80,95-104,107-113,113-126
24. b.50.1 Acid proteases
Acid proteases barrel, closed; n=6, S=10, complex topology
2pma d2pmab1 B:24-29,29-37,38-47,147-154
2pma d2pmaa1 A:25-29,29-37,38-47,147-154
25. b.1.18 E set domains "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies !
Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
2by2 d2by2a1 A:65-72,77-84,85-89,223-230
2by3 d2by3a1 A:65-72,77-84,85-89,223-230
2by0 d2by0a1 A:65-72,77-84,85-89,223-230
2bhu d2bhua1 A:65-72,77-84,85-89,223-230
2bxy d2bxya1 A:65-72,77-84,85-89,223-230
2bxz d2bxza1 A:65-72,77-84,85-89,223-230
2bhz d2bhza1 A:65-72,77-84,85-89,223-230
2bhy d2bhya1 A:65-72,77-84,85-89,223-230
2by1 d2by1a1 A:65-72,77-84,85-89,223-230
2fhb d2fhba1 A:341-349,355-367,368-377,618-625
2fhf d2fhfa1 A:341-350,354-367,368-377,618-625
2fhc d2fhca1 A:341-350,355-367,368-377,618-625
26. d.129.5 MoaD-related protein, C-terminal domain contains a single copy of this fold !
TBP-like beta-alpha-beta(4)-alpha
1v8c d1v8ca2 A:76-83,86-95,137-150,151-165
1v8c d1v8cc2 C:76-83,87-95,137-150,151-165
1v8c d1v8cb2 B:76-82,88-95,137-150,151-164
1v8c d1v8cd2 D:76-83,87-95,137-150,151-165
27. d.109.1 Actin depolymerizing proteins
Gelsolin-like 3 layers: a/b/a; contains mixed beta-sheet
1h1v d1h1vg1 G:439-444,445-453,460-468,505-513
2fh2 d2fh2b1 B:439-444,445-453,460-468,505-513
28. b.69.5 RCC1/BLIP-II two families are clearly related but differ by the number of strands per blade !
7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
1a12 d1a12b_ B:138-145,182-189,191-198,219-226
1a12 d1a12a_ A:138-145,182-189,191-198,219-226
1i2m d1i2md_ D:138-145,182-189,191-198,219-226
1i2m d1i2mb_ B:138-145,182-189,191-198,219-226
29. b.8.1 TRAF domain-like has a circularly permuted immunoglobulin-fold topology with extra strand !
TRAF domain-like sandwich; 8 strands in 2 sheets; greek-key
2an6 d2an6a1 A:203-212,221-230,231-240,246-254
1k2f d1k2fa_ A:201-212,221-230,231-240,246-254
1k2f d1k2fb_ B:161-169,176-185,186-197,260-268
1k2f d1k2fa_ A:161-169,176-185,186-199,260-268
2an6 d2an6d1 D:161-169,175-185,186-198,260-268
2an6 d2an6a1 A:161-169,175-185,186-197,260-268
2an6 d2an6c1 C:161-169,175-185,186-197,260-268
2an6 d2an6b1 B:161-169,175-185,186-198,260-269
30. d.28.1 Ribosomal protein S19
Ribosomal protein S19 alpha-beta-X-beta(2); 2 layers: alpha/beta; mixed beta-sheet, order: 123
2qou d2qous1 S:36-40,46-53,54-61,62-69
2qbb d2qbbs1 S:36-40,47-51,55-60,62-69
31. c.1.8 (Trans)glycosidases
TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites
1mfu d1mfua2 A:100-105,123-128,129-133,172-190
1hx0 d1hx0a2 A:100-105,123-128,129-133,172-190
1mfv d1mfva2 A:100-105,123-128,129-133,172-190
1nm9 d1nm9a2 A:100-105,123-128,129-133,172-190
1kxq d1kxqd2 D:100-105,123-128,129-133,172-190
1kxv d1kxvb2 B:100-105,123-128,129-133,172-190
1wo2 d1wo2a2 A:100-105,123-128,129-133,172-190
1q4n d1q4nx2 X:100-105,123-128,129-133,172-190
1kxt d1kxte2 E:100-105,123-128,129-133,172-190
3dhp d3dhpa2 A:100-105,123-128,129-133,172-190
1cpu d1cpua2 A:100-105,123-128,129-133,172-190
1jxj d1jxja2 A:100-105,123-128,129-133,172-190
1u33 d1u33a2 A:100-105,123-128,129-133,172-190
1c8q d1c8qa2 A:100-105,123-128,129-133,172-190
1pig d1piga2 A:100-105,123-128,129-133,172-190
1z32 d1z32x2 X:100-105,123-128,129-133,172-190
1xd0 d1xd0a2 A:100-105,123-128,129-133,172-190
1jxk d1jxka2 A:100-105,123-128,129-133,172-190
1xh0 d1xh0a2 A:100-105,123-128,129-133,172-190
1xcx d1xcxa2 A:100-105,123-128,129-133,172-190
1xcw d1xcwa2 A:100-105,123-128,129-133,172-190
1eo7 d1eo7a4 A:139-143,155-160,161-167,204-222
1xv8 d1xv8b2 B:100-105,123-128,129-133,172-190
1xv8 d1xv8a2 A:100-105,123-128,129-133,172-190
1xd1 d1xd1a2 A:100-105,123-128,129-133,172-190
1b2y d1b2ya2 A:100-105,123-128,129-133,172-190
2qv4 d2qv4a2 A:100-105,123-128,129-133,172-190
1xgz d1xgza2 A:100-105,123-128,129-133,172-190
2cpu d2cpua2 A:100-105,123-128,129-133,172-190
1jae d1jaea2 A:98-102,117-122,123-127,160-178
3cpu d3cpua2 A:100-105,123-128,129-133,172-190
3bax d3baxa2 A:100-105,123-128,129-133,172-190
1kgu d1kgua2 A:100-105,123-128,129-133,172-190
3baw d3bawa2 A:100-105,123-128,129-133,172-190
1kgx d1kgxa2 A:100-105,123-128,129-133,172-190
1kb3 d1kb3a2 A:100-105,123-128,129-133,172-190
3baj d3baja2 A:100-105,123-128,129-133,172-190
1cgu d1cgua4 A:139-143,155-160,161-167,204-222
1smd d1smda2 A:100-105,123-128,129-133,172-190
1kgw d1kgwa2 A:100-105,123-128,129-133,172-190
1bsi d1bsia2 A:100-105,123-128,129-133,172-190
1v3l d1v3lb4 B:139-144,155-160,161-167,204-222
1pif d1pifa2 A:100-105,123-128,129-133,172-190
1xh2 d1xh2a2 A:100-105,123-128,129-133,172-190
1u2y d1u2ya2 A:100-105,123-128,129-133,172-190
1xh1 d1xh1a2 A:100-105,123-128,129-133,172-190
2dij d2dija4 A:139-143,155-160,161-167,204-222
1cxf d1cxfa4 A:139-144,155-160,161-167,204-222
1kbk d1kbka2 A:100-105,123-128,129-133,172-190
3bak d3baka2 A:100-105,123-128,129-133,172-190
1ded d1dedb4 B:139-143,155-160,161-167,204-222
3bai d3baia2 A:100-105,123-128,129-133,172-190
1ded d1deda4 A:139-143,155-160,161-167,204-222
1v3m d1v3ma4 A:139-144,155-160,161-167,204-222
1clv d1clva2 A:98-102,117-122,123-127,160-178
1u30 d1u30a2 A:100-105,123-128,129-133,172-190
1v3j d1v3jb4 B:139-144,155-160,161-167,204-222
1viw d1viwa2 A:98-102,117-122,123-127,160-178
1jfh d1jfha2 A:100-105,123-128,129-133,172-190
1tmq d1tmqa2 A:98-102,117-122,123-127,160-178
1v3j d1v3ja4 A:139-144,155-160,161-167,204-222
1v3m d1v3mb4 B:139-144,155-160,161-167,204-222
3bay d3baya2 A:100-105,123-128,129-133,172-190
1i75 d1i75b4 B:139-144,155-160,161-167,204-222
1cgy d1cgya4 A:139-144,155-160,161-167,204-222
1i75 d1i75a4 A:139-144,155-160,161-167,204-222
1cgw d1cgwa4 A:139-144,155-160,161-167,204-222
1d7f d1d7fa4 A:139-144,155-160,161-167,204-222
1pam d1pama4 A:139-144,155-160,161-167,204-222
1kcl d1kcla4 A:139-144,155-160,161-167,204-222
1d3c d1d3ca4 A:139-144,155-160,161-167,204-222
1uks d1uksa4 A:139-144,155-160,161-167,204-222
1ukq d1ukqa4 A:139-144,155-160,161-167,204-222
1eo5 d1eo5a4 A:139-144,155-160,161-167,204-222
1cxl d1cxla4 A:139-144,155-160,161-167,204-222
1cxi d1cxia4 A:139-144,155-160,161-167,204-222
5cgt d5cgta4 A:139-144,155-160,161-167,204-222
1pez d1peza4 A:139-144,155-160,161-167,204-222
1uks d1uksb4 B:139-144,155-160,161-167,204-222
1v3k d1v3kb4 B:139-144,155-160,161-167,204-222
1cgx d1cgxa4 A:139-144,155-160,161-167,204-222
1cxh d1cxha4 A:139-144,155-160,161-167,204-222
1d7f d1d7fb4 B:139-144,155-160,161-167,204-222
1v3l d1v3la4 A:139-144,155-160,161-167,204-222
1cdg d1cdga4 A:139-144,155-160,161-167,204-222
1kck d1kcka4 A:139-144,155-160,161-167,204-222
1pj9 d1pj9a4 A:139-144,155-160,161-167,204-222
1v3k d1v3ka4 A:139-144,155-160,161-167,204-222
1pam d1pamb4 B:139-144,155-160,161-167,204-222
2cxg d2cxga4 A:139-144,155-160,161-167,204-222
1cxe d1cxea4 A:139-144,155-160,161-167,204-222
7cgt d7cgta4 A:139-144,155-160,161-167,204-222
3bmv d3bmva4 A:140-145,156-161,162-168,205-223
1a47 d1a47a4 A:140-145,156-161,162-168,205-223
1cgv d1cgva4 A:139-144,155-160,161-167,204-222
3bmw d3bmwa4 A:140-145,156-161,162-168,205-223
1ukq d1ukqb4 B:139-144,155-160,161-167,204-222
1ot1 d1ot1a4 A:139-144,155-160,161-167,204-222
1cyg d1cyga4 A:135-140,151-156,157-163,200-218
1cgt d1cgta4 A:139-144,155-160,161-167,204-222
1ot2 d1ot2a4 A:139-144,155-160,161-167,204-222
1dtu d1dtua4 A:139-144,155-160,161-167,204-222
1ciu d1ciua4 A:140-145,156-161,162-168,205-223
1ukt d1uktb4 B:139-144,155-160,161-167,204-222
3cgt d3cgta4 A:139-144,155-160,161-167,204-222
6cgt d6cgta4 A:139-144,155-160,161-167,204-222
8cgt d8cgta4 A:139-144,155-160,161-167,204-222
9cgt d9cgta4 A:139-144,155-160,161-167,204-222
1cxk d1cxka4 A:139-144,155-160,161-167,204-222
1tcm d1tcma4 A:139-144,155-160,161-167,204-222
1tcm d1tcmb4 B:139-144,155-160,161-167,204-222
1qho d1qhoa4 A:131-137,147-152,153-159,203-221
1qhp d1qhpa4 A:131-137,147-152,153-159,203-221
32. d.93.1 SH2 domain
SH2-like 3 layers: a/b/a; antiparallel beta-sheet of 5 strands is flaked by two helices
1mil d1mila_ A:51-56,61-66,67-71,72-84
33. b.29.1 Concanavalin A-like lectins/glucanases
Concanavalin A-like lectins/glucanases sandwich; 12-14 strands in 2 sheets; complex topology
1ikq d1ikqa1 A:23-30,40-52,96-106,138-148
1ikp d1ikpa1 A:23-30,40-52,96-106,138-148
2dcy d2dcyd1 D:49-56,61-74,75-87,145-157
2dcy d2dcye1 E:49-56,61-74,75-87,145-157
1w2u d1w2ua_ A:82-92,96-108,118-125,176-189
1oa3 d1oa3d_ D:78-91,91-104,114-121,171-184
1ks4 d1ks4a_ A:78-89,92-104,114-121,176-188
1oa2 d1oa2c_ C:78-91,91-104,114-121,171-184
1oa3 d1oa3c_ C:78-91,91-104,114-121,171-184
1ks5 d1ks5a_ A:78-89,92-104,114-121,176-188
1h8v d1h8ve_ E:78-91,91-104,114-121,171-184
1olq d1olqb_ B:78-91,91-104,114-121,171-184
1olr d1olra_ A:82-92,96-108,118-129,176-189
1oa2 d1oa2a_ A:78-91,91-104,114-121,171-184
1h8v d1h8va_ A:78-91,91-104,114-121,171-184
1olq d1olqa_ A:78-91,91-104,114-121,171-184
1h8v d1h8vf_ F:78-91,91-104,114-121,171-184
1oa2 d1oa2e_ E:78-91,91-104,114-125,171-184
1oa2 d1oa2d_ D:78-91,91-104,114-125,171-184
1oa2 d1oa2b_ B:78-91,91-104,114-125,171-184
1oa3 d1oa3b_ B:78-91,91-104,114-125,171-184
1h8v d1h8vc_ C:78-91,91-104,114-125,171-184
1oa3 d1oa3a_ A:78-91,91-104,114-125,171-184
1oa2 d1oa2f_ F:78-91,91-104,114-125,171-184
1h8v d1h8vd_ D:78-91,91-104,114-125,171-184
1h8v d1h8vb_ B:78-91,91-104,114-125,171-184
34. c.10.2 L domain-like less regular structure consisting of variable repeats !
Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) 2 curved layers, a/b; parallel beta-sheet; order 1234...N; there are sequence similarities between different superfamilies
1mox d1moxa2 A:342-349,352-357,358-363,364-374
35. b.112.1 C-terminal domain of mollusc hemocyanin analogous to the Ig-like domain of arthropod hemocyanin; similar sequential but different spatial position relative the shared domain !
C-terminal domain of mollusc hemocyanin six-stranded beta-sandwich, jelly-roll/greek-key topology
1lnl d1lnlb2 B:305-313,319-330,335-344,361-369
36. d.15.6 Superantigen toxins, C-terminal domain
beta-Grasp (ubiquitin-like) core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
1uup d1uupb2 B:2138-2142,2166-2177,2180-2186,2193-2204
1bxt d1bxtb2 B:149-153,177-188,190-198,206-217
37. c.52.1 Restriction endonuclease-like
Restriction endonuclease-like core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest
1azo d1azoa_ A:92-98,119-126,137-145,215-228
38. d.104.1 Class II aaRS and biotin synthetases
Class II aaRS and biotin synthetases contains large mixed beta-sheet
1e1t d1e1ta2 A:314-319,411-418,419-428,478-487
1e24 d1e24a2 A:314-319,411-418,419-428,478-487
1e22 d1e22a2 A:314-319,411-418,419-428,478-487
1e1o d1e1oa2 A:314-319,411-418,419-428,478-487
1lyl d1lyla2 A:314-319,408-418,419-428,478-487
1bbw d1bbwa2 A:314-319,408-418,419-428,478-487
1bbu d1bbua2 A:314-319,408-418,419-428,478-487
1lyl d1lylc2 C:314-319,408-418,419-428,478-487
1lyl d1lylb2 B:314-319,408-418,419-428,478-487
39. c.32.1 Tubulin nucleotide-binding domain-like
Tubulin nucleotide-binding domain-like 3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456
2bto d2btob1 B:5-12,52-59,60-67,116-132
40. b.47.1 Trypsin-like serine proteases
Trypsin-like serine proteases barrel, closed; n=6, S=8; greek-key ! duplication: consists of two domains of the same fold
2rce d2rcei1 I:74-85,153-161,201-208,237-251
2rce d2rceb1 B:74-85,153-162,201-208,237-252
2qf3 d2qf3b1 B:75-85,153-161,201-208,237-251
2qf0 d2qf0a1 A:75-85,153-161,201-208,237-252
2rce d2rcee1 E:73-86,153-161,201-208,237-251
2qf0 d2qf0c1 C:73-86,153-161,201-208,237-252
1soz d1sozb2 B:73-85,153-161,201-208,237-252
2r3u d2r3ua1 A:73-85,153-161,202-208,237-251
2qf0 d2qf0b1 B:73-86,153-161,201-208,237-252
2rce d2rcea1 A:73-86,153-161,201-208,237-251
1vcw d1vcwc2 C:72-86,153-160,201-208,237-252
2qf3 d2qf3c1 C:72-86,153-161,201-208,237-251
2rce d2rcef1 F:72-86,153-161,201-208,237-252
2r3y d2r3ya2 A:72-85,153-161,201-208,237-252
2qf0 d2qf0d1 D:72-86,153-161,201-208,237-252
2r3y d2r3yc2 C:73-86,151-161,201-208,237-252
1soz d1soza2 A:72-85,153-161,201-208,237-252
2rce d2rced1 D:72-85,153-161,201-208,237-252
2qf0 d2qf0f1 F:72-86,153-161,201-208,237-252
1vcw d1vcwb2 B:72-86,151-161,201-208,237-252
1vcw d1vcwa2 A:72-86,151-161,201-208,237-252
2rce d2rcec1 C:71-86,153-161,201-208,237-252
1soz d1sozc2 C:70-86,152-161,201-208,237-252
41. c.66.1 S-adenosyl-L-methionine-dependent methyltransferases
S-adenosyl-L-methionine-dependent methyltransferases core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest
1wxx d1wxxc2 C:93-101,171-178,179-186,195-208
1wxx d1wxxb2 B:93-101,171-178,179-186,195-208
1wxw d1wxwa2 A:93-101,171-178,179-186,195-209
2cww d2cwwb2 B:93-101,171-178,179-186,195-209
1wxw d1wxwb2 B:93-101,171-178,179-186,195-209
2cww d2cwwa2 A:93-101,171-178,179-186,195-209
1wxw d1wxwd2 D:93-101,171-178,179-186,195-209
1wxw d1wxwc2 C:93-101,171-178,179-186,195-209
42. a.250.1 IpaD-like
IpaD-like 6 helices; bundle, up-and-down; can be divided into two four-helical bundles sharing two helices (3 and 6), which are twice longer than the rest
2izp d2izpa1 A:1065-1071,1178-1183,1246-1250,1250-1301
2j9t d2j9tb1 B:64-71,178-183,246-250,250-301
2j9t d2j9ta1 A:65-71,178-183,246-250,250-301
2ixr d2ixra1 A:65-71,179-183,246-250,250-302
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 65 (enumeration index: query40) of S4
2icf A:106-113,180-189,195-203,590-602
3ikt A:104-112,118-123,124-128,129-138
3ikt B:104-112,118-123,124-128,129-138
2xwx B:210-219,226-235,244-250,256-272
3g5b A:677-686,691-703,742-749,778-785
2keq A:63-69,72-77,79-83,83-91
2wiz A:58-63,79-88,92-97,110-117
3qre A:132-138,140-144,177-181,181-189
3qre A:111-117,140-144,177-181,181-189
2vuy B:68-76,79-94,95-100,301-309
3gco A:74-85,153-161,201-208,237-252
2a25 A:161-169,176-185,186-196,260-268
2wiw A:59-63,79-88,92-97,110-117
2wiw B:59-63,79-88,89-97,110-117
3gp8 A:582-586,588-595,607-615,630-637
2hkd A:253-262,289-297,298-308,333-342
3nzm A:63-69,73-77,79-83,83-91
2b39 B:127-134,201-210,216-224,610-623
3qcz A:218-223,247-253,254-261,266-281
2e8z B:149-158,160-171,172-178,347-354
2e8z A:149-158,160-171,172-178,347-354
3lgv C:73-86,153-161,201-208,237-252
3lgv E:75-85,153-161,201-208,237-251
3lgv A:74-85,153-161,201-208,237-252
3lgv B:73-85,153-161,201-208,237-251
3lgv F:72-87,153-161,201-208,237-251
3lgv D:72-85,153-161,201-208,237-252
3pnd C:228-234,283-292,322-330,338-345
3pnd D:227-231,283-292,322-330,338-345
3pnd A:227-232,283-292,322-330,338-345
2yrf A:240-244,326-331,332-336,338-348
2yrf B:240-244,326-331,332-336,338-348
3t89 A:142-148,150-154,187-191,191-199
3t89 D:142-148,150-154,187-191,191-199
3t89 F:142-148,150-154,187-191,191-199
3t89 C:142-148,150-154,187-191,191-199
3t89 B:142-148,150-154,187-191,191-199
2aor A:92-98,119-127,137-145,215-228
3p40 A:149-153,154-162,195-201,203-210
2jen A:117-129,129-142,153-160,214-227
2zzu T:19-26,32-41,42-49,58-67
2xzi B:324-331,367-380,385-396,397-404
2hr0 A:106-113,180-189,195-202,590-602
3bpt A:155-161,163-167,199-204,203-211
3h02 B:142-148,150-154,187-191,191-199
3h02 D:142-148,150-154,187-191,191-199
2x4a A:417-425,446-452,453-460,476-493
2af5 A:230-239,266-274,275-285,310-319
2vsc B:8-13,18-26,76-83,84-91
2vsc A:8-13,18-26,76-83,84-91
2vsc D:8-13,18-26,76-83,84-91
3eex A:253-262,289-297,298-308,333-342
3eex B:253-262,289-297,298-308,333-342
2qo3 B:645-651,708-717,719-726,832-845
2noo A:37-42,61-68,116-122,126-135
3f0o A:131-137,140-147,183-188,188-207
3f0o B:131-137,140-147,183-188,188-204
2xn2 A:574-581,582-586,587-591,592-604
3fdu C:128-133,136-140,173-177,177-185
3fdu D:107-113,136-140,173-177,177-185
3fdu D:128-133,136-140,173-177,177-185
3fdu E:128-133,136-140,173-177,177-185
3fdu C:107-113,136-140,173-177,177-185
3fdu E:107-113,136-140,173-177,177-185
2ol8 O:182-191,218-226,227-237,262-271
3gcn A:74-85,153-161,201-208,237-252
2yvk A:240-244,326-331,332-336,338-349
2yvk D:240-244,326-331,332-336,338-348
2yvk B:240-244,326-331,332-336,338-348
2yvk C:240-244,326-331,332-336,338-348
3psa A:204-210,214-219,242-246,247-255
2jqz A:57-70,74-83,92-100,100-111
3mvy A:37-42,61-68,116-122,128-135
3mvy B:37-42,61-68,116-122,128-135
3k2i B:19-25,28-41,43-56,76-84
3k2i A:19-25,28-41,43-56,76-84
3n11 A:220-226,230-235,237-242,244-258
3fn8 A:131-137,140-147,183-188,188-208
3a5i A:424-432,451-458,459-467,483-500
2xcq A:1169-1173,1336-1340,1341-1345,1347-1391
3ij9 A:100-105,123-128,129-133,172-190
3dmy A:119-124,177-181,182-186,518-529
3dmy B:119-125,177-181,182-186,518-529
2kqa A:1-6,59-66,68-75,86-95
3blp X:100-105,123-128,129-133,172-190
3qim B:37-42,61-68,116-122,128-135
3qim A:37-42,61-68,116-122,128-135
3t8b A:170-176,179-183,216-220,220-228
3t8b A:149-155,179-183,216-220,220-228
3gdu B:72-85,153-161,201-208,237-252
3gdu C:73-85,153-161,201-208,237-252
2xco A:1169-1174,1336-1340,1341-1345,1347-1391
2uzf A:130-136,138-142,175-179,179-187
2uzf B:130-136,138-142,175-179,179-187
2uzf A:109-115,138-142,175-179,179-187
3mt6 Q:110-114,117-122,171-175,175-183
3mt6 S:110-114,117-122,171-175,175-183
3mt6 Z:110-114,117-122,171-175,175-183
3mt6 X:110-114,117-122,171-175,175-183
3mt6 A:110-114,117-122,171-175,175-183
3mt6 B:110-114,117-122,171-175,175-183
3mt6 E:110-114,117-122,171-175,175-183
3mt6 A:110-114,117-122,171-175,175-183
3mt6 R:110-114,117-122,171-175,175-183
3myd A:459-467,486-493,494-502,518-535
2xtl A:573-581,582-593,602-608,608-615
2xtl B:573-581,582-593,602-608,608-615
2bii B:312-318,322-333,386-394,394-402
2bii A:312-318,322-333,386-394,394-402
3h0u A:130-136,139-143,176-180,180-188
3h0u C:130-136,139-143,176-180,180-188
3h0u B:130-136,139-143,176-180,180-188
2jjs D:8-13,18-26,76-83,84-91
2jjs C:8-13,18-26,76-83,84-91
1w78 A:217-223,234-241,242-249,254-269
2zxc B:294-304,306-312,316-322,468-489
2zxc A:294-304,306-312,316-322,468-489
2jem A:117-129,129-142,153-160,214-227
2jem B:117-129,129-142,153-160,214-227
2fh6 A:341-350,354-367,368-377,618-625
2vtf B:545-552,556-565,568-575,582-591
3psh A:204-210,214-219,242-246,247-255
2y5e A:174-182,186-199,200-209,415-422
3n2a A:217-223,247-253,254-261,266-281
2jfd A:575-581,638-645,647-654,765-776
2jfd D:575-581,638-645,647-654,765-775
2jfd B:575-581,638-645,647-655,765-775
2jfd C:575-581,638-645,647-655,765-775
2foj A:113-122,130-142,148-159,172-179
3gk7 B:313-317,391-396,397-402,406-418
3gk7 A:313-317,391-396,397-402,406-418
3l3o D:106-113,179-189,195-203,590-602
3l3o A:106-113,179-189,195-203,590-602
3cka B:253-262,289-297,298-308,333-342
3cka A:253-262,289-297,298-308,333-342
2x49 A:417-425,446-452,453-460,476-493
3lw9 B:417-425,446-452,453-460,476-509
3lw9 A:417-425,446-452,453-460,476-509
3blk A:100-105,123-128,129-133,172-190
2a74 A:106-113,179-189,195-203,590-602
2a74 D:106-113,180-189,195-203,590-602
3il2 A:104-112,118-123,124-128,129-138
3il2 B:104-112,118-123,124-128,129-138
3be6 C:181-186,191-197,224-229,229-237
3be6 A:181-186,191-197,224-229,229-237
3no0 A:504-509,530-536,538-544,545-552
3no0 A:517-527,530-536,538-544,545-552
2xzk B:324-331,367-380,385-396,397-404
2ol6 O:183-192,219-227,228-238,263-272
3ole A:100-105,123-128,129-133,172-190
2xzj B:324-331,367-380,385-396,397-404
3ij8 A:100-105,123-128,129-133,172-190
3m4f C:73-83,86-97,100-107,167-179
3luu A:17-25,74-82,83-90,90-100
3bez D:419-424,427-432,509-513,513-521
3bez A:398-404,427-433,508-513,513-521
3bez B:419-424,427-432,509-513,513-521
3bez A:419-424,427-433,508-513,513-521
3bez C:419-424,427-432,509-513,513-521
3k9k A:444-448,478-489,516-526,607-622
2xct D:1169-1177,1336-1340,1341-1345,1347-1391
2xct U:1169-1177,1336-1340,1341-1345,1347-1391
3e9i A:305-310,398-408,409-418,468-477
3e9i B:305-310,398-408,409-418,468-477
3e9i D:305-310,398-408,409-418,468-477
3e9i C:305-310,398-408,409-418,468-477
1zty A:37-42,63-70,117-124,127-138
3ckg A:169-178,205-213,214-224,249-258
3n12 A:220-226,230-235,237-242,244-258
3olg A:100-105,123-128,129-133,172-190
2zwl T:19-26,32-41,42-49,58-67
3m3g A:19-24,79-87,88-96,106-115
2vz8 A:575-581,638-645,647-654,765-776
3a74 A:305-310,398-408,409-418,468-477
3a74 C:305-310,398-408,409-418,468-477
3a74 B:305-310,398-408,409-418,468-477
3a74 D:305-310,398-408,409-418,468-477
3c7x A:331-338,464-469,473-480,500-507
1zu0 A:37-42,63-70,117-124,127-138
3qdq A:313-317,391-396,397-402,406-418
2zws A:294-304,306-312,316-323,468-489
3cu7 A:123-131,197-206,212-220,618-632
3cu7 B:123-131,197-206,212-220,618-632
1zd7 A:63-69,73-77,79-83,83-91
1zd7 B:63-69,72-77,79-83,83-91
2e8y B:149-158,160-171,172-178,347-354
2e8y A:149-158,160-171,172-178,347-354
3mw0 B:37-42,61-68,116-122,128-135
3mw0 A:37-42,61-68,116-122,128-135
3ec5 A:253-262,289-297,298-308,333-342
2fgz A:341-350,354-367,368-377,618-625
3oc7 A:127-133,135-139,171-175,175-183
3oc7 A:106-112,135-139,171-175,175-183
3be5 B:181-186,191-197,224-229,229-237
3be5 C:181-186,191-197,224-229,229-237
2wii A:106-113,180-189,195-203,590-602
3hs0 F:105-111,173-181,187-195,572-584
3hs0 A:105-111,173-181,187-195,572-584
2oy7 A:253-262,289-297,298-308,333-342
3f2g A:131-137,140-147,183-188,188-208
3n15 A:220-226,230-235,237-242,244-258
3mvx A:37-42,61-68,116-122,128-135
3mvx B:37-42,61-68,116-122,128-135
3gxx B:55-61,74-79,80-84,85-102
3gxx D:54-61,75-79,80-84,85-103
3gxx C:54-61,73-79,80-84,85-103
3gxx A:54-61,73-79,80-84,85-100
3f2h A:131-138,140-147,183-188,188-208
3pv3 A:61-75,140-147,193-200,226-241
2wcz A:59-63,79-88,89-97,110-117
3nrs A:218-223,247-253,254-261,266-281
3e9h A:305-310,398-408,409-418,468-477
3e9h C:305-310,398-408,409-418,468-477
3e9h B:305-310,398-408,409-418,468-477
3e9h D:305-310,398-408,409-418,468-477
2o18 D:209-213,265-274,304-312,320-327
3ij7 A:100-105,123-128,129-133,172-190
3ecs D:198-202,282-287,288-292,292-307
3ecs H:198-202,282-287,288-292,292-307
3ecs F:198-202,282-287,288-292,292-306
3ecs A:198-202,282-287,288-292,292-306
3ecs C:198-202,282-287,288-292,292-306
3mvw A:37-42,61-68,116-122,128-135
3mvw B:37-42,61-68,116-122,128-135
3f2f A:131-137,140-147,183-188,188-207
3f2f B:131-137,140-148,182-188,188-205
3hrx E:114-120,122-126,159-163,163-171
3hrx D:114-120,122-126,159-163,163-171
3hrx F:114-120,122-126,159-163,163-171
3hrx A:114-120,122-126,159-163,163-171
3hrx B:114-120,122-126,159-163,163-171
3hrx C:114-120,122-126,159-163,163-171
3gdv A:73-85,153-161,201-208,237-252
3gdv C:73-85,153-161,201-208,237-252
3gdv B:72-85,153-161,202-208,237-252
2f1z B:111-122,130-142,148-159,172-179
2wan A:363-372,375-385,386-392,563-570
3ikv B:104-112,118-123,124-128,129-138
3ikv A:104-112,118-123,124-128,129-138
3i5o B:41-46,65-72,119-126,131-142
3i5o A:41-46,65-72,119-126,131-142
1w7k A:217-223,234-241,242-249,254-269
2y4s A:174-182,186-199,200-209,415-422
3f0p A:131-137,140-147,183-188,188-207
3f0p B:131-137,140-147,183-188,188-204
3t4a A:106-113,179-189,195-203,590-602
3t4a D:106-113,179-189,195-203,590-602
2oy8 A:253-262,289-297,298-308,333-342
3mvz A:37-42,61-68,116-122,128-135
3mvz B:37-42,61-68,116-122,128-135
3hd8 B:49-56,62-74,75-87,145-157
2oas B:308-312,381-386,387-392,396-408
2oas A:308-312,381-386,387-392,396-408
2w86 A:39-44,46-52,56-63,67-76
2qki A:106-113,180-189,195-203,590-602
2vsu E:129-135,137-141,174-178,178-186
2vsu B:129-135,137-141,174-178,178-186
2vsu F:129-135,137-141,174-178,178-186
2vsu A:129-135,137-141,174-178,178-186
2vsu C:129-135,137-141,174-178,178-186
2wj0 B:59-63,79-88,89-97,110-117
2qe8 A:143-152,207-214,216-222,232-240
2qe8 B:143-152,207-214,216-222,232-240
2ol7 B:184-193,220-228,229-239,264-273
2ol7 A:184-193,220-228,229-239,264-273
3ry3 B:61-66,85-92,136-143,146-156
3ry3 A:61-66,85-92,136-143,146-156
3ckf A:161-170,197-205,206-216,241-250
3ohx A:106-113,179-189,195-203,590-602
3ohx D:106-113,179-189,195-203,590-602
2fkg A:253-262,289-297,298-308,333-342
2oy1 O:183-192,219-227,228-238,263-272
3m07 A:49-57,62-69,71-75,209-216
2xe1 A:254-259,288-293,294-299,332-339
3ela T:19-26,31-41,42-49,58-67
3hlk A:81-87,90-103,105-119,138-146
3hlk B:81-87,90-103,105-120,138-146
3p2l C:114-118,121-126,175-179,179-187
2vss F:129-135,137-141,174-178,178-186
2vss C:129-135,137-141,174-178,178-186
2vss D:129-135,137-141,174-178,178-186
2vss B:129-135,137-141,174-178,178-186
2vss E:129-135,137-141,174-178,178-186
2vss A:129-135,137-141,174-178,178-186
2dcz A:49-56,61-74,75-87,145-157
2z71 A:36-40,65-73,75-83,101-113
3mzb B:37-42,61-68,116-122,126-135
3mzb A:37-42,61-68,116-122,128-135
1w2l A:30-35,40-45,47-52,53-64
3n18 A:220-226,230-235,237-242,244-258
2vr5 A:68-76,79-94,95-101,301-309
3hrz A:104-111,173-181,187-195,572-584
3n1a A:220-226,230-235,237-242,244-258
1s5l B:375-381,396-404,408-412,413-427
1s5l B:2375-2381,2396-2404,2408-2412,2413-2427
3n13 A:220-226,230-235,237-242,244-258
3b7m C:77-86,90-102,112-123,170-182
3b7m A:77-86,90-102,112-123,170-182
3b7m B:77-86,90-102,112-123,170-182
3b7m D:77-86,90-102,112-123,170-182
2g8c O:184-193,220-228,229-239,264-273
3mz9 B:37-42,61-68,116-122,128-135
3mz9 A:37-42,61-68,116-122,128-135
2hj0 B:375-379,439-444,445-450,469-482
2hj0 A:375-379,439-444,445-450,469-482
2hg4 D:636-642,701-708,710-717,823-837
2hg4 B:636-642,700-708,709-717,823-837
3ju1 A:143-149,151-155,187-191,191-199
3ju1 B:143-149,151-155,187-191,191-199
3lgi B:72-85,153-161,201-208,237-252
3lgi C:73-86,153-161,201-208,237-252
3lgi A:75-85,153-161,201-208,237-252
2xn1 A:574-581,582-586,587-591,592-604
2xn1 B:574-581,582-586,587-591,592-604
2qz3 A:49-56,61-74,75-86,145-157
2j5i D:129-135,137-141,174-178,178-186
2j5i A:129-135,137-141,174-178,178-186
2j5i I:129-135,137-141,174-178,178-186
2j5i H:129-135,137-141,174-178,178-186
2j5i J:129-135,137-141,174-178,178-186
2j5i L:129-135,137-141,174-178,178-186
2j5i C:129-135,137-141,174-178,178-186
2j5i E:129-135,137-141,174-178,178-186
2j5i B:129-135,137-141,174-178,178-186
2j5i K:129-135,137-141,174-178,178-186
2j5i F:129-135,137-141,174-178,178-186
2j5i G:129-135,137-141,174-178,178-186
3bju B:382-387,481-491,492-501,551-560
3bju A:382-387,481-491,492-501,551-560
3bju D:380-387,481-491,492-501,551-560
3bju C:382-387,481-491,492-501,551-560
2e9b B:149-158,160-171,172-178,347-354
2e9b A:149-158,160-171,172-178,347-354
3bf0 D:419-424,427-432,509-513,513-521
3bf0 C:419-424,427-432,509-513,513-521
3bf0 A:398-404,427-432,509-513,513-521
3bf0 A:419-424,427-432,509-513,513-521
3bf0 B:419-424,427-432,509-513,513-521
3bf0 D:398-404,427-432,509-513,513-521
2iwm A:37-43,68-76,78-86,104-116
2zl0 H:112-117,119-124,173-177,177-185
3oli A:100-105,123-128,129-133,172-190
2fh8 A:341-349,354-367,368-377,618-625
3lpf B:89-93,93-100,101-109,381-403
3hhd C:575-581,638-645,646-654,765-776
3hhd D:575-581,638-645,647-654,765-776
3hhd B:575-581,638-645,647-654,765-776
3hhd A:575-581,638-645,647-654,765-776
2pi3 O:184-193,220-228,229-239,264-273
3hn3 B:117-125,128-135,136-144,153-160
3pyz A:218-223,247-253,254-261,266-281
3lh3 A:73-85,153-161,201-208,237-251
3lh3 B:74-85,153-161,201-208,237-252
3lh3 F:71-85,153-161,201-208,237-252
3lh3 C:72-85,153-161,201-208,237-252
3lh3 D:72-86,153-161,201-208,237-252
3lh3 I:74-85,153-161,201-208,237-251
3lh3 E:73-85,153-161,201-208,237-251
2pn5 A:99-107,175-184,185-196,542-553
2i5v O:184-193,220-228,229-239,264-273
3pvm A:123-131,197-206,211-220,619-632
3pvm C:123-131,197-206,211-220,619-632
3pvm B:127-133,194-204,209-217,594-606
3pvm D:127-133,194-204,209-217,594-606
2vz9 A:575-581,638-645,646-654,765-775
2nvv F:354-358,420-425,426-431,435-448
2nvv D:354-358,420-425,426-431,435-448
2nvv C:354-358,420-425,426-431,435-448
2nvv E:354-358,420-425,426-431,435-448
2nvv A:354-358,420-425,426-431,435-448
2nvv B:354-358,420-425,426-431,435-448
3frp A:105-111,173-181,187-195,572-584
3hln T:110-114,117-122,171-175,175-183
3hln K:110-114,117-122,171-176,175-183
3hln G:110-114,117-122,171-175,175-183
3hln I:110-114,117-122,171-175,175-183
3hln M:110-114,117-122,171-175,175-183
3hln R:110-114,117-122,171-175,175-183
3pv2 A:61-75,140-147,193-200,226-241
3pv2 B:61-75,140-147,193-200,226-241
2zl3 K:112-117,119-124,173-177,177-185
2oyb O:184-193,220-228,229-239,264-273
3q7h M:112-117,119-124,173-177,177-185
3q7h I:112-117,119-124,173-177,177-185
3q7h J:112-117,119-124,173-177,177-185
3q7h L:112-117,119-124,173-177,177-185
3q7h K:112-117,119-124,173-177,177-185
3q7h F:87-95,119-124,173-177,177-185
3q7h A:112-117,119-124,173-177,177-185
3q7h B:112-117,119-124,173-177,177-185
3q7h C:112-117,119-124,173-177,177-185
3q7h G:112-116,119-124,173-177,177-185
3q7h D:112-117,119-124,173-177,177-185
3q7h F:112-117,119-124,173-177,177-185
3q7h N:112-117,119-124,173-177,177-185
3q7h E:112-117,119-124,173-177,177-185
3q7h H:112-117,119-124,173-177,177-185
3t8a C:170-176,179-183,216-220,220-228
3t8a B:170-176,179-183,216-220,220-228
3t8a A:170-176,179-183,216-220,220-228
3n17 A:220-226,230-235,237-242,244-258
2i5z O:184-193,220-228,229-239,264-273
3nms A:106-113,180-189,195-203,590-602
3old A:100-105,123-128,129-133,172-190
3nft A:1064-1071,1178-1183,1246-1250,1250-1304
3prx D:127-133,195-204,208-217,594-606
3prx A:123-131,197-206,211-220,619-632
3prx B:127-133,195-204,208-217,594-606
3prx C:123-131,197-206,211-220,619-632
3eh7 A:314-318,387-392,393-398,402-414
2fkj B:299-308,335-343,344-354,379-388
2fkj C:299-308,335-343,344-354,379-388
2fkj A:299-308,335-343,344-354,379-388
2jjt D:8-13,18-26,76-83,84-91
2jjt C:8-13,18-26,76-83,84-91
3gds A:74-85,153-161,201-208,237-252
2oy5 O:184-193,220-228,229-239,264-273
1zde A:73-79,83-87,89-93,93-101
2f1x B:113-122,131-142,148-159,172-179
2f1x A:113-122,131-142,148-159,172-179
2c4f T:19-26,31-41,42-49,58-67
1yg8 B:110-115,117-123,170-175,175-183
1yg8 A:110-115,117-123,169-175,175-183
2puq T:19-27,31-41,42-53,58-67
2ec9 T:19-26,31-41,42-49,58-67