4. a.102.2 Seven-hairpin glycosidases alpha/alpha toroid multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies 1fo2 d1fo2a_ A:327-347,348-368,394-413,683-688 1fo3 d1fo3a_ A:327-347,348-368,394-413,683-688 1fmi d1fmia_ A:327-347,348-368,394-413,683-688 1x9d d1x9da1 A:597-612,613-632,657-673,683-688 1dl2 d1dl2a_ A:433-448,449-468,497-514,520-525 1x9d d1x9da1 A:327-347,348-368,401-413,683-688 1g6i d1g6ia_ A:433-448,449-468,497-514,520-525 1fo2 d1fo2a_ A:597-612,613-632,657-674,683-688 1fo3 d1fo3a_ A:394-413,414-431,462-477,683-688 1nxc d1nxca_ A:547-562,563-582,605-622,630-635 1fo3 d1fo3a_ A:597-612,613-632,657-674,683-688 1hcu d1hcud_ D:391-406,407-426,450-466,480-485 1fmi d1fmia_ A:597-612,613-632,657-674,683-688 1hcu d1hcuc_ C:391-406,407-426,450-466,480-485 1hcu d1hcua_ A:391-406,407-426,450-466,480-485 1hcu d1hcub_ B:391-406,407-426,450-466,480-485 1hcu d1hcub_ B:174-193,194-211,244-259,480-485 1kkt d1kkta_ A:407-422,423-442,466-482,496-501 1krf d1krfa_ A:119-143,148-172,195-214,496-501 1g6i d1g6ia_ A:269-289,290-309,336-352,520-525 1kre d1krea_ A:119-143,148-172,195-214,496-501 1kkt d1kktb_ B:407-422,423-442,466-482,496-501 2ri9 d2ri9a1 A:1119-1143,1148-1172,1195-1214,1496-1501 1hcu d1hcua_ A:97-121,126-150,174-193,480-485 2ri9 d2ri9b1 B:2195-2214,2215-2232,2266-2281,2496-2501 1krf d1krfb_ B:407-422,423-442,466-482,496-501 1nxc d1nxca_ A:280-299,300-320,355-367,630-635 1kre d1krea_ A:407-422,423-442,466-482,496-501 1krf d1krfa_ A:407-422,423-442,466-482,496-501 1kkt d1kkta_ A:119-143,148-172,195-214,496-501 1krf d1krfb_ B:119-143,148-172,195-214,496-501 1kre d1kreb_ B:407-422,423-442,466-482,496-501 1hcu d1hcuc_ C:97-121,126-150,174-193,480-485 1hcu d1hcub_ B:97-121,126-150,174-193,480-485 1hcu d1hcud_ D:97-121,126-150,174-193,480-485 1kre d1kreb_ B:119-143,148-172,195-214,496-501 1fo3 d1fo3a_ A:462-477,480-499,523-540,683-688 1dl2 d1dl2a_ A:269-289,290-309,336-352,520-525 2ri9 d2ri9b1 B:2119-2143,2148-2172,2195-2214,2496-2501 2ri8 d2ri8a1 A:1407-1422,1423-1442,1466-1482,1496-1501 2ri8 d2ri8b1 B:2408-2422,2423-2442,2466-2482,2496-2501 2ri8 d2ri8a1 A:1119-1143,1148-1172,1195-1214,1496-1501 1kkt d1kktb_ B:119-143,148-172,195-214,496-501 1fmi d1fmia_ A:457-477,480-499,523-540,683-688 2ri8 d2ri8b1 B:2119-2143,2148-2172,2195-2214,2496-2501 2ri9 d2ri9a1 A:1407-1422,1423-1442,1466-1482,1496-1501 2ri9 d2ri9b1 B:2407-2422,2423-2442,2466-2482,2496-2501 1fo2 d1fo2a_ A:457-477,480-499,523-540,683-688 1hcu d1hcub_ B:244-259,262-281,306-324,480-485 1x9d d1x9da1 A:457-477,480-499,523-540,683-688 1hcu d1hcua_ A:174-193,194-211,241-259,480-485 1hcu d1hcuc_ C:174-193,194-211,241-259,480-485 1g6i d1g6ia_ A:336-352,366-393,433-448,520-525 1dl2 d1dl2a_ A:204-223,224-243,269-289,520-525 1dl2 d1dl2a_ A:336-352,366-393,433-448,520-525 1hcu d1hcud_ D:174-193,194-211,241-259,480-485 1hcu d1hcuc_ C:241-259,262-281,306-324,480-485 1g6i d1g6ia_ A:204-223,224-243,269-289,520-525 1hcu d1hcua_ A:241-259,262-281,306-324,480-485 1hcu d1hcud_ D:241-259,262-281,306-324,480-485 1krf d1krfb_ B:263-281,284-303,328-346,496-501 1kkt d1kktb_ B:263-281,284-303,328-346,496-501 1krf d1krfa_ A:263-281,284-303,328-346,496-501 1dl2 d1dl2a_ A:129-152,155-178,204-223,520-525 2ri9 d2ri9b1 B:2266-2281,2284-2303,2328-2346,2496-2501 2ri9 d2ri9a1 A:1266-1281,1284-1303,1328-1346,1496-1501 1kre d1kreb_ B:263-281,284-303,328-346,496-501 1g6i d1g6ia_ A:129-152,155-178,204-223,520-525 1kkt d1kkta_ A:263-281,284-303,328-346,496-501 1kre d1krea_ A:263-281,284-303,328-346,496-501 2ri8 d2ri8a1 A:1266-1281,1284-1303,1328-1346,1496-1501 1x9d d1x9da1 A:523-540,542-564,597-612,683-688 1krf d1krfa_ A:195-214,215-232,263-281,496-501 1krf d1krfb_ B:195-214,215-232,263-281,496-501 2ri8 d2ri8b1 B:2263-2281,2284-2303,2328-2346,2496-2501 1kre d1kreb_ B:195-214,215-232,263-281,496-501 1kre d1krea_ A:195-214,215-232,263-281,496-501 1kkt d1kkta_ A:195-214,215-232,263-281,496-501 1fo3 d1fo3a_ A:523-540,542-564,597-612,683-688 1fo2 d1fo2a_ A:394-413,414-431,457-477,683-688 1fmi d1fmia_ A:523-540,542-564,597-612,683-688 1kkt d1kktb_ B:195-214,215-232,263-281,496-501 2ri8 d2ri8b1 B:2195-2214,2215-2232,2263-2281,2496-2501 1nxc d1nxca_ A:414-429,432-451,474-491,630-635 1fmi d1fmia_ A:394-413,414-431,457-477,683-688 1fo2 d1fo2a_ A:523-540,542-564,597-612,683-688 1hcu d1hcuc_ C:306-324,325-346,391-406,480-485 1x9d d1x9da1 A:401-413,414-431,457-477,683-688 1hcu d1hcub_ B:306-324,325-346,391-406,480-485 1hcu d1hcua_ A:306-324,325-346,391-406,480-485 1krf d1krfb_ B:328-346,347-369,407-422,496-501 1kkt d1kkta_ A:328-346,347-369,407-422,496-501 1krf d1krfa_ A:328-346,347-369,407-422,496-501 1kre d1kreb_ B:328-346,347-369,407-422,496-501 1kkt d1kktb_ B:328-346,347-369,407-422,496-501 1kre d1krea_ A:328-346,347-369,407-422,496-501 2ri8 d2ri8b1 B:2328-2346,2347-2369,2408-2422,2496-2501 1hcu d1hcud_ D:306-324,325-347,391-406,480-485 2ri9 d2ri9b1 B:2328-2346,2347-2369,2407-2422,2496-2501 2ri8 d2ri8a1 A:1328-1346,1347-1369,1407-1422,1496-1501 2ri9 d2ri9a1 A:1328-1346,1347-1369,1407-1422,1496-1501 1nxc d1nxca_ A:474-491,492-518,547-562,630-635 6. c.150.1 EreA/ChaN-like there are four conserved residues in the putative active site: two His and two Glu EreA/ChaN-like Core: 3 layers: a/b/a; parallel beta-sheet of 5 strands, order:51423; 2g5g d2g5gx1 X:86-97,101-110,116-131,132-137 2ebf d2ebfx2 X:945-959,963-975,980-993,994-1000 2ebh d2ebhx2 X:945-959,963-975,980-993,994-1000 2ec5 d2ec5a2 A:945-959,963-975,980-993,994-1000 2ec5 d2ec5b2 B:945-959,963-975,980-993,994-1000 8. a.118.4 Lipovitellin-phosvitin complex, superhelical domain alpha-alpha superhelix multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix 1lsh d1lsha1 A:469-484,485-496,507-526,747-756 1lsh d1lsha1 A:543-558,560-574,576-593,636-648 1lsh d1lsha1 A:424-446,450-468,469-484,747-756 1lsh d1lsha1 A:387-402,405-418,424-446,747-756 1lsh d1lsha1 A:322-340,340-352,354-369,814-837 9. e.42.1 L-A virus major coat protein L-A virus major coat protein large protein without apparent domain division 1m1c d1m1cb_ B:119-140,268-284,285-302,317-324 1m1c d1m1ca_ A:119-140,268-284,285-302,317-324 11. d.55.1 Ribosomal protein L22 some topological similarity to prokaryotic ribosomal protein L17 ! Ribosomal protein L22 beta-alpha(3)-beta(2); 2 layers: alpha/beta; related to the enolase/MLE N-domain fold by a circular permutation 2gya d2gyaq1 Q:13-26,28-39,41-63,68-79 2qbi d2qbis1 S:13-25,28-40,41-63,69-79 3df2 d3df2s1 S:13-25,28-40,41-63,69-79 1yj9 d1yj9r1 R:24-36,39-53,81-103,109-120 2gyc d2gycq1 Q:13-27,28-39,41-63,68-88 1i4j d1i4jb_ B:13-25,28-40,41-63,68-86 2hgq d2hgqv1 V:13-25,28-40,43-63,68-87 3dll d3dllp1 P:34-48,49-60,62-84,89-110 1i4j d1i4ja_ A:13-25,28-39,41-63,68-86 2hgu d2hguv1 V:13-25,28-40,41-63,68-89 2hgj d2hgjv1 V:13-25,28-40,41-63,68-89 2aw4 d2aw4s1 S:13-25,31-40,41-63,69-86 3bbx d3bbxs1 S:13-25,31-40,41-63,69-86 2rdo d2rdos1 S:13-25,31-40,41-63,69-86 1vs6 d1vs6s1 S:13-25,31-40,41-63,69-86 2vhm d2vhms1 S:13-25,28-40,41-63,69-84 2qao d2qaos1 S:13-25,28-40,41-62,69-89 2qam d2qams1 S:13-25,28-40,41-62,69-89 2z4n d2z4ns1 S:13-25,28-40,41-62,69-89 1bxe d1bxea_ A:13-25,28-39,43-63,68-86 2z4l d2z4ls1 S:13-25,28-40,41-62,69-89 2qbc d2qbcs1 S:13-25,28-40,41-63,69-89 2qba d2qbas1 S:13-25,28-40,41-63,69-89 2qbk d2qbks1 S:13-25,28-40,41-63,69-89 2i2v d2i2vs1 S:13-25,28-40,41-63,69-89 2i2t d2i2ts1 S:13-25,28-40,41-63,69-89 2zjp d2zjpp1 P:34-46,49-60,62-84,89-109 2qbe d2qbes1 S:13-25,28-40,41-63,69-89 2qbg d2qbgs1 S:13-25,28-40,41-63,69-89 2b9n d2b9nw1 W:13-25,28-39,41-63,68-89 3df4 d3df4s1 S:13-25,28-40,41-63,69-89 2b9p d2b9pw1 W:13-25,28-39,41-63,68-89 2j01 d2j01w1 W:13-25,28-39,41-63,68-89 2j03 d2j03w1 W:13-25,28-39,41-63,68-89 2b66 d2b66w1 W:13-25,28-39,41-63,68-89 2qoz d2qozs1 S:13-25,28-39,41-63,69-89 2qp1 d2qp1s1 S:13-25,28-39,41-63,69-89 3cf5 d3cf5p1 P:34-46,49-60,62-84,89-110 3ccj d3ccjr1 R:24-36,39-53,81-103,109-129 2qov d2qovs1 S:13-25,28-40,41-63,69-89 2zjr d2zjrp1 P:34-46,49-60,62-84,89-110 2qox d2qoxs1 S:13-25,28-40,41-63,69-89 1vs8 d1vs8s1 S:13-25,28-40,44-63,70-88 1vq9 d1vq9r1 R:24-36,39-53,81-103,109-129 1vq7 d1vq7r1 R:24-36,39-53,81-103,109-129 1q81 d1q81s_ S:24-36,39-53,81-103,109-129 3ccq d3ccqr1 R:24-36,39-53,81-103,109-129 1vq5 d1vq5r1 R:24-36,39-53,81-103,109-129 1yhq d1yhqr1 R:24-36,39-53,81-103,109-129 3cpw d3cpwq1 Q:24-36,39-53,81-103,109-129 1vqp d1vqpr1 R:24-36,39-53,81-103,109-129 1vq6 d1vq6r1 R:24-36,39-53,81-103,109-129 1vqk d1vqkr1 R:24-36,39-53,81-103,109-129 3ccr d3ccrr1 R:24-36,39-53,81-103,109-129 2otj d2otjr1 R:24-36,39-53,81-103,109-129 1vql d1vqlr1 R:24-36,39-53,81-103,109-129 3cme d3cmer1 R:24-36,39-53,81-103,109-129 1m1k d1m1ks_ S:24-36,39-53,81-103,109-129 1yjn d1yjnr1 R:24-36,39-53,81-103,109-129 3ccu d3ccur1 R:24-36,39-53,81-103,109-129 2zjq d2zjqp1 P:34-46,49-60,62-84,89-110 1vqm d1vqmr1 R:24-36,39-53,81-103,109-129 1yit d1yitr1 R:24-36,39-53,81-103,109-129 3cma d3cmar1 R:24-36,39-53,81-103,109-129 1vq4 d1vq4r1 R:24-36,39-53,81-103,109-129 1vqn d1vqnr1 R:24-36,39-53,81-103,109-129 1ffk d1ffko_ O:24-36,39-53,81-103,109-129 3ccm d3ccmr1 R:24-36,39-53,81-103,109-129 1yij d1yijr1 R:24-36,39-53,81-103,109-129 3ccs d3ccsr1 R:24-36,39-53,81-103,109-129 1vqo d1vqor1 R:24-36,39-53,81-103,109-129 1m90 d1m90s_ S:24-36,39-53,81-103,109-129 1vq8 d1vq8r1 R:24-36,39-53,81-103,109-129 1yi2 d1yi2r1 R:24-36,39-53,81-103,109-129 1s72 d1s72r_ R:24-36,39-53,81-103,109-129 3ccv d3ccvr1 R:24-36,39-53,81-103,109-129 3ccl d3cclr1 R:24-36,39-53,81-103,109-129 3cc7 d3cc7r1 R:24-36,39-53,81-103,109-129 1q82 d1q82s_ S:24-36,39-53,81-103,109-129 1k73 d1k73s_ S:24-36,39-53,81-103,109-129 1jj2 d1jj2q_ Q:24-36,39-53,81-103,109-129 3cce d3ccer1 R:24-36,39-53,81-103,109-129 1qvf d1qvfq_ Q:24-36,39-53,81-103,109-129 1k9m d1k9ms_ S:24-36,39-53,81-103,109-129 1kc8 d1kc8s_ S:24-36,39-53,81-103,109-129 1nji d1njis_ S:24-36,39-53,81-103,109-129 3cc2 d3cc2r1 R:24-36,39-53,81-103,109-129 1q7y d1q7ys_ S:24-36,39-53,81-103,109-129 2otl d2otlr1 R:24-36,39-53,81-103,109-129 1yjw d1yjwr1 R:24-36,39-53,81-103,109-129 1q86 d1q86s_ S:24-36,39-53,81-103,109-129 1k8a d1k8as_ S:24-36,39-53,81-103,109-129 1kqs d1kqsq_ Q:24-36,39-53,81-103,109-129 3cd6 d3cd6r1 R:24-36,39-53,81-103,109-129 2qa4 d2qa4r1 R:24-36,39-53,81-103,109-129 3cc4 d3cc4r1 R:24-36,39-53,81-103,109-129 1qvg d1qvgq_ Q:24-36,39-53,81-103,109-129 1kd1 d1kd1s_ S:24-36,39-53,81-103,109-129 1n8r d1n8rs_ S:24-36,39-53,81-103,109-129 2qex d2qexr1 R:24-36,39-53,81-103,109-129 1vsa d1vsaq1 Q:13-25,28-39,41-63,68-86 2vhn d2vhns1 S:13-25,28-40,41-63,69-89 1xbp d1xbpq1 Q:34-46,49-60,62-84,89-111 2awb d2awbs1 S:13-25,28-40,44-63,71-88 2j28 d2j28s1 S:13-25,28-40,44-63,71-88 1yl3 d1yl3s1 S:13-25,28-39,41-63,70-88 12. d.133.1 Molybdenum cofactor-binding domain duplication: consists of 4 structural repeats arranged in 2 lobes ! contains one left-hand beta-alpha-beta unit per lobe ! Molybdenum cofactor-binding domain beta(2)-alpha-beta-alpha-beta; 2 layers: a/b; mixed sheet: order 1243: crossing loops 1sb3 d1sb3d2 D:359-381,383-392,409-423,434-446 1sb3 d1sb3a2 A:359-381,383-392,409-423,434-446 1rm6 d1rm6a2 A:359-381,383-392,409-423,434-446 1rm6 d1rm6d2 D:359-381,383-392,409-423,434-446 1jro d1jrof2 F:343-365,367-376,412-426,443-457 1jro d1jrod2 D:343-365,367-376,413-426,443-457 1jrp d1jrpd2 D:343-365,367-376,413-426,443-457 1jrp d1jrpb2 B:343-365,367-376,413-426,443-457 1jro d1jrob2 B:343-365,367-376,412-426,443-457 1jro d1jroh2 H:344-365,367-376,412-426,443-457 1jrp d1jrph2 H:344-365,367-376,413-426,443-457 1jrp d1jrpf2 F:344-365,367-376,413-426,443-457 1n62 d1n62b2 B:391-411,413-422,442-455,476-491 1n62 d1n62e2 E:391-411,413-422,442-455,476-491 1ffu d1ffub2 B:388-408,410-419,439-452,470-485 1ffv d1ffvb2 B:388-408,410-419,439-452,470-485 1n60 d1n60b2 B:391-411,413-422,442-455,476-491 1zxi d1zxib2 B:391-411,413-422,442-455,476-491 1ffv d1ffve2 E:388-408,410-419,439-452,470-485 1n60 d1n60e2 E:391-411,413-422,442-455,476-491 1n61 d1n61b2 B:391-411,413-422,442-455,476-491 1n63 d1n63b2 B:391-411,413-422,442-455,476-491 1ffu d1ffue2 E:388-408,410-419,439-452,470-485 1n63 d1n63e2 E:391-411,413-422,442-455,476-491 1n61 d1n61e2 E:391-411,413-422,442-455,476-491 1n5w d1n5wb2 B:391-411,413-422,442-455,476-491 1n5w d1n5we2 E:391-411,413-422,442-455,476-491 1t3q d1t3qe2 E:372-394,396-405,425-438,453-467 1t3q d1t3qb2 B:372-394,396-405,425-438,453-467 1vdv d1vdva5 A:914-935,937-946,962-976,993-1007 1vdv d1vdvb5 B:914-935,937-946,962-976,993-1007 1v97 d1v97b5 B:913-935,937-946,962-976,993-1008 1v97 d1v97a5 A:913-935,937-946,962-976,993-1008 3b9j d3b9jc2 C:913-935,937-946,962-976,993-1008 1n5x d1n5xb5 B:914-935,937-946,962-976,993-1008 1n5x d1n5xa5 A:914-935,937-946,962-976,993-1008 1dgj d1dgja4 A:536-558,560-569,585-609,612-626 1fo4 d1fo4b5 B:914-935,937-946,962-976,993-1008 1fo4 d1fo4a5 A:914-935,937-946,962-976,993-1008 1vlb d1vlba4 A:534-556,558-567,583-593,610-624 1sij d1sija4 A:534-556,558-567,583-593,610-624 1fiq d1fiqc2 C:914-935,937-946,962-976,993-1008 1vlb d1vlba4 A:534-556,558-567,592-607,610-624 1sij d1sija4 A:534-556,558-567,592-607,610-624 1jro d1jrof2 F:343-365,367-376,426-442,443-457 1jrp d1jrpd2 D:343-365,367-376,426-442,443-457 1jrp d1jrpb2 B:343-365,367-376,426-442,443-457 1jro d1jrod2 D:343-365,367-376,426-442,443-457 1jrp d1jrph2 H:344-365,367-376,426-442,443-457 1jro d1jrob2 B:343-365,367-376,426-442,443-457 1jrp d1jrpf2 F:344-365,367-376,426-442,443-457 1jro d1jroh2 H:344-365,367-376,426-442,443-457 1n62 d1n62b2 B:391-411,413-422,455-473,476-491 1n62 d1n62e2 E:391-411,413-422,455-473,476-491 1n60 d1n60e2 E:391-411,413-422,455-473,476-491 1zxi d1zxib2 B:391-411,413-422,455-473,476-491 1n61 d1n61e2 E:391-411,413-422,455-473,476-491 1n63 d1n63b2 B:391-411,413-422,455-473,476-491 1n63 d1n63e2 E:391-411,413-422,455-473,476-491 1n61 d1n61b2 B:391-411,413-422,455-473,476-491 1n5w d1n5wb2 B:391-411,413-422,455-473,476-491 1n5w d1n5we2 E:391-411,413-422,455-473,476-491 1vdv d1vdva5 A:914-935,937-946,976-992,993-1007 1vdv d1vdvb5 B:914-935,937-946,976-992,993-1007 1v97 d1v97b5 B:913-935,937-946,976-992,993-1008 1v97 d1v97a5 A:913-935,937-946,976-992,993-1008 1fo4 d1fo4a5 A:914-935,937-946,976-992,993-1008 3b9j d3b9jc2 C:913-935,937-946,976-992,993-1008 1fo4 d1fo4b5 B:914-935,937-946,976-992,993-1008 1n5x d1n5xb5 B:914-935,937-946,976-992,993-1008 1n5x d1n5xa5 A:914-935,937-946,976-992,993-1008 18. d.313.1 Prenyltransferase-like the barrel channel harbours the substrate-binding site ! Antiparallel beta/alpha barrel (PT-barrel) tandem repeat of five alpha(2)-beta(2) motifs; antiparallel beta-sheet barrel, closed; n=10, S=10; order 123456789A; there is a channel along the barrel axis 1zcw d1zcwa1 A:26-38,73-82,89-103,104-113 1zdw d1zdwa1 A:26-38,73-82,89-103,104-113 1zdy d1zdya1 A:26-38,73-82,89-103,104-113 1zb6 d1zb6a1 A:26-38,73-82,89-103,104-113 1zdy d1zdya1 A:148-156,185-197,202-212,212-220 1zb6 d1zb6a1 A:148-156,185-197,202-212,213-220 1zcw d1zcwa1 A:148-156,185-197,202-212,213-220 1zdw d1zdwa1 A:148-156,185-197,202-212,213-220 20. c.138.1 Indigoidine synthase A-like Indigoidine synthase A-like core: 3 layers, a/b/a; parallel beta-sheet of 7 strands, order 2134756 1vkm d1vkme_ E:17-26,26-45,63-74,75-79 1vkm d1vkmd_ D:17-26,26-45,63-74,75-79 1vkm d1vkma_ A:17-26,26-45,63-74,75-79 1vkm d1vkmf_ F:17-26,26-45,63-74,75-79 1vkm d1vkmc_ C:17-26,26-45,63-74,75-79 1vkm d1vkmb_ B:17-26,26-45,63-74,75-79 24. d.75.1 tRNA-intron endonuclease N-terminal domain-like MutS N-terminal domain-like beta(2)-alpha-beta(2)-alpha-beta(2); 2 layers, alpha/beta 1rlv d1rlva4 A:182-193,201-214,215-230,231-237 1rlv d1rlvb4 B:182-193,201-214,215-230,231-237 1r0v d1r0va3 A:182-193,201-214,215-230,231-237 1r0v d1r0vd3 D:182-193,201-214,215-230,231-237 1r11 d1r11b4 B:182-193,201-214,215-230,231-237 1r0v d1r0vb3 B:182-193,201-214,215-230,231-237 1r0v d1r0vc3 C:182-193,201-214,215-230,231-237 1r11 d1r11a4 A:182-193,201-214,215-230,231-237 2gjw d2gjwb4 B:184-195,203-216,217-232,233-239 2gjw d2gjwc4 C:184-195,203-216,217-232,233-239 1rlv d1rlvb3 B:31-42,48-61,62-77,80-84 1rlv d1rlva3 A:31-42,48-61,62-77,80-84 2gjw d2gjwd4 D:185-196,204-217,218-233,234-240 2gjw d2gjwa4 A:185-196,204-217,218-233,234-240 1a79 d1a79b2 B:46-57,70-83,84-99,101-106 1a79 d1a79d2 D:46-57,70-83,84-99,101-106 1r11 d1r11a3 A:31-42,48-61,62-77,80-84 1r11 d1r11b3 B:31-42,48-61,62-77,80-84 2gjw d2gjwa3 A:34-45,51-64,65-80,83-87 2gjw d2gjwd3 D:34-45,51-64,65-80,83-87 2gjw d2gjwb3 B:33-44,50-63,64-79,82-86 2gjw d2gjwc3 C:33-44,50-63,64-79,82-86 30. a.129.1 GroEL equatorial domain-like duplication: two 4-helical subdomains are related by a pseudo dyad passing through the ATP-binding site ! GroEL equatorial domain-like multihelical; 8 helices arranged in 2 parallel layers 1j4z d1j4zj1 J:415-427,448-459,461-473,476-481 1kpo d1kpox1 X:415-427,448-459,461-473,476-481 1j4z d1j4zi1 I:415-427,448-459,461-473,476-481 1kpo d1kpoy1 Y:415-427,448-459,461-473,476-481 1j4z d1j4zd1 D:415-427,448-459,461-473,476-481 1j4z d1j4zf1 F:415-427,448-459,461-473,476-481 1kpo d1kpor1 R:415-427,448-459,461-473,476-481 1j4z d1j4zg1 G:415-427,448-459,461-473,476-481 1j4z d1j4za1 A:415-427,448-459,461-473,476-481 1j4z d1j4zn1 N:415-427,448-459,461-473,476-481 1kpo d1kpou1 U:415-427,448-459,461-473,476-481 1j4z d1j4zm1 M:415-427,448-459,461-473,476-481 1kpo d1kpoo1 O:415-427,448-459,461-473,476-481 1j4z d1j4zb1 B:415-427,448-459,461-473,476-481 1kpo d1kpow1 W:415-427,448-459,461-473,476-481 1kpo d1kpo11 1:415-427,448-459,461-473,476-481 1j4z d1j4ze1 E:415-427,448-459,461-473,476-481 1kpo d1kpop1 P:415-427,448-459,461-473,476-481 1kpo d1kpot1 T:415-427,448-459,461-473,476-481 1kpo d1kpo21 2:415-427,448-459,461-473,476-481 1kpo d1kpos1 S:415-427,448-459,461-473,476-481 1kpo d1kpov1 V:415-427,448-459,461-473,476-481 1kpo d1kpoz1 Z:415-427,448-459,461-473,476-481 1j4z d1j4zc1 C:415-427,448-459,461-473,476-481 1j4z d1j4zh1 H:415-427,448-459,461-473,476-481 1j4z d1j4zk1 K:415-427,448-459,461-473,476-481 1j4z d1j4zl1 L:415-427,448-459,461-473,476-481 1kpo d1kpoq1 Q:415-427,448-459,461-473,476-481 1oel d1oeld1 D:416-427,433-459,461-473,476-480 1a6e d1a6ea1 A:408-427,427-453,455-470,473-478 1oel d1oelb1 B:416-427,433-459,461-473,476-480 1grl d1grlc1 C:416-427,433-459,461-473,476-481 1grl d1grla1 A:416-427,433-459,461-473,476-481 1grl d1grld1 D:416-427,433-459,461-473,476-481 1grl d1grlb1 B:416-427,433-459,461-473,476-481 1grl d1grle1 E:416-427,433-459,461-473,476-481 1grl d1grlf1 F:416-427,433-459,461-473,476-481 1grl d1grlg1 G:416-427,433-459,461-473,476-481 1iok d1ioka1 A:416-429,433-459,461-472,477-482 1oel d1oele1 E:416-427,433-459,461-473,476-481 1iok d1iokf1 F:416-429,433-459,461-472,477-482 1iok d1ioke1 E:416-429,433-459,461-472,477-482 1iok d1iokd1 D:416-429,433-459,461-472,477-482 1iok d1iokg1 G:416-429,433-459,461-472,477-482 1iok d1iokb1 B:416-429,433-459,461-472,477-482 1iok d1iokc1 C:416-429,433-459,461-472,477-482 1oel d1oelf1 F:416-427,433-459,461-473,476-481 1oel d1oela1 A:416-427,433-459,461-473,476-481 1oel d1oelg1 G:416-427,433-459,461-473,476-481 1sjp d1sjpb1 B:412-427,429-455,457-468,471-477 1kpo d1kpow1 W:415-427,433-449,461-473,476-481 1j4z d1j4zj1 J:415-427,433-449,461-473,476-481 1j4z d1j4zc1 C:415-427,433-449,461-473,476-481 1kpo d1kpot1 T:415-427,433-449,461-473,476-481 1kpo d1kpos1 S:415-427,433-449,461-473,476-481 1kpo d1kpoy1 Y:415-427,433-449,461-473,476-481 1j4z d1j4zl1 L:415-427,433-449,461-473,476-481 1j4z d1j4za1 A:415-427,433-449,461-473,476-481 1j4z d1j4zd1 D:415-427,433-449,461-473,476-481 1kpo d1kpoo1 O:415-427,433-449,461-473,476-481 1j4z d1j4ze1 E:415-427,433-449,461-473,476-481 1kpo d1kpou1 U:415-427,433-449,461-473,476-481 1j4z d1j4zn1 N:415-427,433-449,461-473,476-481 1kpo d1kpor1 R:415-427,433-449,461-473,476-481 1kpo d1kpox1 X:415-427,433-449,461-473,476-481 1j4z d1j4zh1 H:415-427,433-449,461-473,476-481 1j4z d1j4zg1 G:415-427,433-449,461-473,476-481 1j4z d1j4zm1 M:415-427,433-449,461-473,476-481 1kpo d1kpo11 1:415-427,433-449,461-473,476-481 1j4z d1j4zf1 F:415-427,433-449,461-473,476-481 1j4z d1j4zi1 I:415-427,433-449,461-473,476-481 1j4z d1j4zb1 B:415-427,433-449,461-473,476-481 1kpo d1kpoq1 Q:415-427,433-449,461-473,476-481 1kpo d1kpo21 2:415-427,433-449,461-473,476-481 1kpo d1kpoz1 Z:415-427,433-449,461-473,476-481 1kpo d1kpov1 V:415-427,433-449,461-473,476-481 1j4z d1j4zk1 K:415-427,433-449,461-473,476-481 1kpo d1kpop1 P:415-427,433-449,461-473,476-481 1oel d1oelc5 C:416-427,433-449,461-473,476-481 1mnf d1mnfc1 C:416-427,433-449,461-473,476-481 1mnf d1mnfb1 B:416-427,433-449,461-473,476-481 1mnf d1mnfn1 N:416-427,433-449,461-473,476-481 1mnf d1mnfj1 J:416-427,433-449,461-473,476-481 1mnf d1mnfi1 I:416-427,433-449,461-473,476-481 1mnf d1mnfd1 D:416-427,433-449,461-473,476-481 1mnf d1mnff1 F:416-427,433-449,461-473,476-481 1mnf d1mnfg1 G:416-427,433-449,461-473,476-481 1mnf d1mnfa1 A:416-427,433-449,461-473,476-481 1mnf d1mnfe1 E:416-427,433-449,461-473,476-481 1mnf d1mnfm1 M:416-427,433-449,461-473,476-481 1mnf d1mnfl1 L:416-427,433-449,461-473,476-481 1mnf d1mnfh1 H:416-427,433-449,461-473,476-481 1mnf d1mnfk1 K:416-427,433-449,461-473,476-481 1aon d1aoni1 I:416-427,433-449,461-473,476-481 1pf9 d1pf9i1 I:416-427,433-449,461-473,476-481 1aon d1aonm1 M:416-427,433-449,461-473,476-481 1aon d1aonl1 L:416-427,433-449,461-473,476-481 1pf9 d1pf9m1 M:416-427,433-449,461-473,476-481 1aon d1aonj1 J:416-427,433-449,461-473,476-481 1aon d1aonh1 H:416-427,433-449,461-473,476-481 1pf9 d1pf9k1 K:416-427,433-449,461-473,476-481 1pf9 d1pf9h1 H:416-427,433-449,461-473,476-481 1aon d1aonk1 K:416-427,433-449,461-473,476-481 1aon d1aonn1 N:416-427,433-449,461-473,476-481 1pf9 d1pf9l1 L:416-427,433-449,461-473,476-481 1pf9 d1pf9j1 J:416-427,433-449,461-473,476-481 1pf9 d1pf9n1 N:416-427,433-449,461-473,476-481 1pcq d1pcqi1 I:416-427,433-449,461-473,476-481 1pcq d1pcqm1 M:416-427,433-449,461-473,476-481 1aon d1aong1 G:416-427,433-449,461-473,476-480 1aon d1aonc1 C:416-427,433-449,461-473,476-480 1pf9 d1pf9g1 G:416-427,433-449,461-473,476-480 1pf9 d1pf9b1 B:416-427,433-449,461-473,476-480 1aon d1aone1 E:416-427,433-449,461-473,476-480 1aon d1aonb1 B:416-427,433-449,461-473,476-480 1pcq d1pcql1 L:416-427,433-449,461-473,476-481 1pcq d1pcqh1 H:416-427,433-449,461-473,476-481 1pcq d1pcqk1 K:416-427,433-449,461-473,476-481 1aon d1aona1 A:416-427,433-449,461-473,476-480 1pcq d1pcqn1 N:416-427,433-449,461-473,476-481 1pcq d1pcqj1 J:416-427,433-449,461-473,476-481 1aon d1aond1 D:416-427,433-449,461-473,476-480 1pf9 d1pf9d1 D:416-427,433-449,461-473,476-480 1kp8 d1kp8j1 J:416-427,433-449,461-473,476-481 1kp8 d1kp8c1 C:416-427,433-449,461-473,476-481 1kp8 d1kp8g1 G:416-427,433-449,461-473,476-481 1kp8 d1kp8i1 I:416-427,433-449,461-473,476-481 1kp8 d1kp8d1 D:416-427,433-449,461-473,476-481 1pf9 d1pf9c1 C:416-427,433-449,461-473,476-481 1kp8 d1kp8k1 K:416-427,433-449,461-473,476-481 1kp8 d1kp8f1 F:416-427,433-449,461-473,476-481 1pf9 d1pf9e1 E:416-427,433-449,461-473,476-481 1kp8 d1kp8a1 A:416-427,433-449,461-473,476-481 1pf9 d1pf9f1 F:416-427,433-449,461-473,476-481 1pf9 d1pf9a1 A:416-427,433-449,461-473,476-481 1pcq d1pcqb1 B:416-429,433-449,461-473,476-481 1aon d1aonf1 F:416-427,433-449,461-473,476-481 1pcq d1pcqg1 G:416-429,433-449,461-473,476-481 1pcq d1pcqc1 C:416-429,433-449,461-473,476-481 1pcq d1pcqa1 A:416-429,433-449,461-473,476-481 1pcq d1pcqf1 F:416-429,433-449,461-473,476-481 1pcq d1pcqe1 E:416-429,433-449,461-473,476-481 1pcq d1pcqd1 D:416-429,433-449,461-473,476-481 34. c.83.1 Aconitase iron-sulfur domain Aconitase iron-sulfur domain consists of three similar domains with 3 layers (a/b/a) each; duplication ! core: parallel beta-sheet of 5 strands, order 32145 1b0m d1b0ma2 A:37-47,165-175,249-264,266-270 6acn d6acna2 A:37-47,165-175,249-264,265-270 1ami d1amia2 A:37-47,165-175,249-263,265-270 7acn d7acna2 A:37-47,165-175,249-264,265-270 1nis d1nisa2 A:37-47,165-175,249-264,265-270 1aco d1acoa2 A:37-47,165-175,249-264,265-270 1nit d1nita2 A:37-47,165-175,249-264,265-270 8acn d8acna2 A:37-47,165-175,249-264,265-270 1amj d1amja2 A:37-47,165-175,249-263,265-270 1fgh d1fgha2 A:37-47,165-175,249-264,265-270 1b0k d1b0ka2 A:37-47,165-175,249-263,265-270 5acn d5acna2 A:37-47,165-175,249-264,265-270 1c96 d1c96a2 A:37-47,165-175,249-263,265-270 1c97 d1c97a2 A:37-47,165-175,249-263,265-270 1b0j d1b0ja2 A:37-47,165-175,249-264,265-270 2b3y d2b3ya2 A:36-50,205-215,289-300,305-310 2b3y d2b3yb2 B:36-50,205-215,289-300,305-310 2b3x d2b3xa2 A:36-50,205-215,289-300,305-310 43. e.40.1 Cullin homology domain Cullin homology domain 3 domains: (1) 4-helical bundle; (2) alpha+beta; (3) "winged helix"-like 1ldk d1ldkb2 B:604-618,621-630,632-647,680-684 1ldj d1ldja3 A:604-618,621-630,632-647,680-684 1ldj d1ldja3 A:458-477,481-497,497-528,533-542 2hye d2hyec3 C:445-464,468-484,484-516,521-529 1ldk d1ldkb2 B:458-477,481-497,497-528,534-540 52. d.58.46 eEF1-gamma domain elaborated with additional structures ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1pbu d1pbua_ A:289-297,301-314,406-419,429-437