List of the counted superfamily hits for pattern ID: 223 (enumeration index: query59) of S4

List of the counted superfamily hits for pattern ID: 223 (enumeration index: query59) of S4

SCOP superfamily ID superfamiily description corresponding fold description
a.102.2Seven-hairpin glycosidases alpha/alpha toroid multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies
c.150.1EreA/ChaN-like there are four conserved residues in the putative active site: two His and two GluEreA/ChaN-like Core: 3 layers: a/b/a; parallel beta-sheet of 5 strands, order:51423;
a.118.4Lipovitellin-phosvitin complex, superhelical domain alpha-alpha superhelix multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
e.42.1L-A virus major coat protein L-A virus major coat protein large protein without apparent domain division
d.55.1Ribosomal protein L22 some topological similarity to prokaryotic ribosomal protein L17 ! Ribosomal protein L22 beta-alpha(3)-beta(2); 2 layers: alpha/beta; related to the enolase/MLE N-domain fold by a circular permutation
d.133.1Molybdenum cofactor-binding domain duplication: consists of 4 structural repeats arranged in 2 lobes ! contains one left-hand beta-alpha-beta unit per lobe ! Molybdenum cofactor-binding domain beta(2)-alpha-beta-alpha-beta; 2 layers: a/b; mixed sheet: order 1243: crossing loops
d.313.1Prenyltransferase-like the barrel channel harbours the substrate-binding site ! Antiparallel beta/alpha barrel (PT-barrel) tandem repeat of five alpha(2)-beta(2) motifs; antiparallel beta-sheet barrel, closed; n=10, S=10; order 123456789A; there is a channel along the barrel axis
c.138.1Indigoidine synthase A-like Indigoidine synthase A-like core: 3 layers, a/b/a; parallel beta-sheet of 7 strands, order 2134756
d.75.1tRNA-intron endonuclease N-terminal domain-like MutS N-terminal domain-like beta(2)-alpha-beta(2)-alpha-beta(2); 2 layers, alpha/beta
a.129.1GroEL equatorial domain-like duplication: two 4-helical subdomains are related by a pseudo dyad passing through the ATP-binding site ! GroEL equatorial domain-like multihelical; 8 helices arranged in 2 parallel layers
c.83.1Aconitase iron-sulfur domain Aconitase iron-sulfur domain consists of three similar domains with 3 layers (a/b/a) each; duplication ! core: parallel beta-sheet of 5 strands, order 32145
e.40.1Cullin homology domain Cullin homology domain 3 domains: (1) 4-helical bundle; (2) alpha+beta; (3) "winged helix"-like
d.58.46eEF1-gamma domain elaborated with additional structures ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2