1. c.37.1 P-loop containing nucleoside triphosphate hydrolases division into families based on beta-sheet topologies !
P-loop containing nucleoside triphosphate hydrolases 3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
2zfm d2zfma1 A:6-14,47-52,53-59,337-354
2uym d2uyma1 A:19-26,62-68,69-74,342-359
1i6i d1i6ia_ A:6-14,47-52,53-59,337-354
2pg2 d2pg2a1 A:19-26,62-68,69-74,342-359
2uyi d2uyia1 A:19-26,62-68,69-74,342-359
2zfl d2zfla1 A:6-14,47-52,53-59,337-355
1vfx d1vfxa_ A:6-14,47-52,53-60,337-354
1x88 d1x88b1 B:19-26,62-68,69-74,342-359
3cnz d3cnzb1 B:890-897,930-934,935-940,1193-1211
1mkj d1mkja_ A:9-16,43-48,49-54,308-325
1vfv d1vfva_ A:6-14,47-52,53-59,337-354
2hxf d2hxfc1 C:6-14,47-52,53-59,337-354
1vfz d1vfza_ A:5-14,47-52,53-59,337-353
1vfx d1vfxa_ A:6-14,27-32,53-60,337-354
1i5s d1i5sa_ A:5-14,47-52,53-59,337-352
2zfi d2zfia1 A:5-14,47-52,53-59,337-352
1vfw d1vfwa_ A:6-14,47-52,53-59,337-355
2zfj d2zfja1 A:5-13,47-52,53-59,337-352
1sdm d1sdma_ A:890-897,928-934,935-940,1190-1211
3cnz d3cnza1 A:890-897,928-934,935-940,1190-1211
2ncd d2ncda_ A:348-356,394-398,399-404,650-670
1cz7 d1cz7b_ B:348-356,394-398,399-404,653-668
1bg2 d1bg2a_ A:8-16,43-48,49-54,308-323
1cz7 d1cz7d_ D:348-356,394-398,399-404,650-671
1n6m d1n6ma_ A:348-356,394-398,399-404,650-671
1goj d1goja_ A:8-15,44-51,52-57,313-330
1ii6 d1ii6a_ A:18-26,62-68,69-74,342-358
2ieh d2iehb1 B:19-26,40-46,69-74,339-359
1ii6 d1ii6b_ B:18-26,62-68,69-74,342-358
1cz7 d1cz7a_ A:348-356,394-398,399-404,650-672
2uyi d2uyib1 B:19-26,40-46,69-74,342-359
2hxf d2hxfc1 C:6-14,27-32,53-59,337-354
1vfv d1vfva_ A:6-14,27-32,53-59,337-354
2zfl d2zfla1 A:6-14,27-32,53-59,337-355
1yrs d1yrsb1 B:19-26,40-46,69-74,342-359
1x88 d1x88a1 A:19-26,40-46,69-74,342-359
1vfw d1vfwa_ A:6-14,27-32,53-59,337-355
1i6i d1i6ia_ A:6-14,27-32,53-59,337-354
2zfm d2zfma1 A:6-14,27-32,53-59,337-354
1cz7 d1cz7c_ C:348-356,394-398,399-404,653-669
1f9v d1f9va_ A:386-394,433-439,439-444,706-722
2uym d2uyma1 A:19-26,40-46,69-74,342-359
3cob d3coba1 A:890-897,911-916,935-940,1190-1211
1goj d1goja_ A:8-15,29-34,52-57,313-330
2zfj d2zfja1 A:5-13,27-32,53-59,337-352
2zfi d2zfia1 A:5-14,27-32,53-59,337-352
2fme d2fmea1 A:19-26,61-68,69-74,342-359
1vfz d1vfza_ A:5-14,27-32,53-59,337-353
2gm1 d2gm1d1 D:19-26,61-68,69-74,342-360
1i5s d1i5sa_ A:5-14,27-32,53-59,337-352
3cob d3cobc1 C:890-897,927-934,935-940,1190-1210
2fme d2fmeb1 B:19-26,61-68,69-74,342-359
1f9u d1f9ua_ A:385-394,433-439,439-444,706-722
3kar d3kara_ A:385-394,433-439,439-444,706-722
1x88 d1x88a1 A:19-26,61-68,69-74,342-359
2g1q d2g1qa1 A:19-26,61-68,69-74,342-359
3cob d3coba1 A:890-897,927-934,935-940,1190-1211
3cob d3cobc1 C:890-897,912-916,935-940,1190-1210
1f9w d1f9wb_ B:385-394,433-439,439-444,706-722
1f9w d1f9wa_ A:385-394,433-439,439-444,706-722
1n6m d1n6mb_ B:348-356,394-399,399-404,650-668
1v8k d1v8ka_ A:72-80,94-99,126-131,385-403
1v8j d1v8ja_ A:72-80,94-99,126-131,385-404
2gm1 d2gm1e1 E:19-26,61-68,69-74,342-360
1cz7 d1cz7d_ D:348-356,368-373,399-404,650-671
2gm1 d2gm1a1 A:19-26,61-68,69-74,342-360
1ry6 d1ry6a_ A:1-9,23-28,55-60,311-330
2gm1 d2gm1b1 B:19-26,61-68,69-74,342-360
1n6m d1n6ma_ A:348-356,368-373,399-404,650-671
3cnz d3cnza1 A:890-897,912-916,935-940,1190-1211
1sdm d1sdma_ A:890-897,912-916,935-940,1190-1211
2q2z d2q2za1 A:19-26,40-45,69-74,339-360
1f9t d1f9ta_ A:385-394,433-439,439-444,706-720
1f9v d1f9va_ A:386-394,405-416,439-444,706-722
2fl2 d2fl2a1 A:19-26,60-68,69-74,342-359
2fl6 d2fl6a1 A:19-26,60-68,69-74,342-359
1f9u d1f9ua_ A:385-394,405-415,439-444,706-722
2ieh d2iehb1 B:19-26,59-68,69-74,339-359
1f9t d1f9ta_ A:385-394,405-416,439-444,706-720
3kar d3kara_ A:385-394,405-415,439-444,706-722
2q2z d2q2za1 A:19-26,59-68,69-74,339-360
1q0b d1q0bb_ B:19-26,59-68,69-74,342-359
3cjo d3cjoa1 A:19-26,59-68,69-74,342-359
1yrs d1yrsb1 B:19-26,59-68,69-74,342-359
1q0b d1q0ba_ A:19-26,59-68,69-74,342-359
2fl2 d2fl2b1 B:19-26,59-68,69-74,342-359
2fky d2fkya1 A:19-26,59-68,69-74,342-359
2fl6 d2fl6b1 B:19-26,59-68,69-74,342-359
1yrs d1yrsa1 A:19-26,59-68,69-74,342-359
2pg2 d2pg2b1 B:19-26,59-68,69-74,342-359
2g1q d2g1qb1 B:19-26,59-68,69-74,342-359
2q2y d2q2yb1 B:19-26,59-68,69-74,342-359
2q2y d2q2ya1 A:19-26,59-68,69-74,342-359
2uyi d2uyib1 B:19-26,59-68,69-74,342-359
2uym d2uymb1 B:19-26,59-68,69-74,342-359
2ieh d2ieha1 A:19-26,59-68,69-74,342-359
2fky d2fkyb1 B:19-26,59-68,69-74,342-360
3cjo d3cjob1 B:19-26,59-68,69-74,342-359
2q2z d2q2zb1 B:19-26,59-68,69-74,342-359
1ry6 d1ry6a_ A:1-9,42-54,55-60,311-330
1v8k d1v8ka_ A:72-80,114-125,126-131,385-403
1v8j d1v8ja_ A:72-80,114-125,126-131,385-404
2. i.10.1 Microtubule complexes
Microtubule complexes
1ia0 d1ia0k_ K:6-14,47-52,53-59,337-354
1ia0 d1ia0k_ K:6-14,27-32,53-59,337-354
3. c.77.1 Isocitrate/Isopropylmalate dehydrogenase-like the constituent families form similar dimers !
Isocitrate/Isopropylmalate dehydrogenase-like consists of two intertwined (sub)domains related by pseudo dyad; duplication ! 3 layers: a/b/a; single mixed beta-sheet of 10 strands, order 213A945867 (A=10); strands from 5 to 9 are antiparallel to the rest
1ps7 d1ps7c_ C:5-13,27-31,31-38,310-329
1ptm d1ptma_ A:5-13,27-31,32-38,310-329
1ptm d1ptmb_ B:5-13,27-31,32-38,310-329
1ps6 d1ps6a_ A:5-13,27-31,32-38,310-329
1ps6 d1ps6b_ B:5-13,27-31,32-38,310-329
1ps7 d1ps7b_ B:5-13,27-31,32-39,310-329
1ps7 d1ps7d_ D:5-13,27-31,31-39,311-329
1ps7 d1ps7a_ A:5-13,27-31,32-39,311-329
1r8k d1r8kb_ B:6-13,27-31,34-39,310-328
4. i.16.1 GroE chaperon
GroE chaperon
1gr5 d1gr5i_ I:216-224,224-228,246-252,305-312
1gr5 d1gr5n_ N:216-224,224-228,246-252,305-312
1gr5 d1gr5k_ K:216-224,224-228,246-252,305-312
1gr5 d1gr5c_ C:216-224,224-228,246-252,305-312
1gr5 d1gr5l_ L:216-224,224-228,246-252,305-312
1gr5 d1gr5j_ J:216-224,224-228,246-252,305-312
1gr5 d1gr5a_ A:216-224,224-228,246-252,305-312
1gr5 d1gr5g_ G:216-224,224-228,246-252,305-312
1gr5 d1gr5f_ F:216-224,224-228,246-252,305-312
1gr5 d1gr5d_ D:216-224,224-228,246-252,305-312
1gr5 d1gr5b_ B:216-224,224-228,246-252,305-312
1gr5 d1gr5m_ M:216-224,224-228,246-252,305-312
1gr5 d1gr5h_ H:216-224,224-228,246-252,305-312
1gr5 d1gr5e_ E:216-224,224-228,246-252,305-312
5. c.69.1 alpha/beta-Hydrolases many members have left-handed crossover connection between strand 8 and additional strand 9 !
alpha/beta-Hydrolases core: 3 layers, a/b/a; mixed beta-sheet of 8 strands, order 12435678, strand 2 is antiparallel to the rest
1jmy d1jmya_ A:99-104,115-120,136-142,436-444
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 68 (enumeration index: query67) of S4
2h58 A:445-453,485-492,493-498,751-766
2h58 A:445-453,468-472,493-498,751-766
3b6u A:10-17,54-59,60-65,323-340
3b6u A:10-17,31-37,60-65,323-340
3b6u B:10-17,54-59,60-65,323-340
2x7e A:19-26,61-68,69-74,342-359
2x7e B:19-26,59-68,69-74,342-359
2rep A:310-318,369-374,375-380,646-661
3t41 B:135-141,195-199,209-216,391-411
3h4s A:888-897,928-934,935-940,1193-1209
2fj0 A:138-144,156-160,168-174,470-480
3l9h B:19-26,62-68,69-74,342-359
3l9h A:19-26,59-68,69-74,342-359
3gbj A:5-14,52-58,59-65,336-351
3gbj B:5-14,52-58,59-65,336-351
3gbj C:5-13,27-32,59-64,336-351
3gbj C:5-13,52-58,59-64,336-351
3gbj B:5-14,27-32,59-65,336-351
3gbj A:5-14,27-32,59-65,336-351
3edl D:73-80,94-99,126-131,385-403
3edl D:73-80,114-125,126-131,385-403
2x7d A:19-26,60-68,69-74,342-359
2x7d A:19-26,40-46,69-74,342-359
2x7d B:19-26,62-68,69-74,342-359
2xae C:19-26,62-68,69-74,342-358
2xae B:19-26,62-68,69-74,342-360
2xae C:19-26,40-46,69-74,342-358
2xae A:19-26,62-68,69-74,342-359
2wbe C:8-15,48-54,55-60,327-344
3k5e A:19-26,61-68,69-74,342-359
3k5e B:19-26,61-68,69-74,342-359
2owm A:40-48,61-65,101-107,396-414
2owm A:40-48,94-100,101-107,396-414
3ken A:19-26,62-68,69-74,342-360
3t32 B:26-30,318-324,343-347,367-383
3t32 A:26-30,318-324,343-347,367-383
3b6v A:11-18,55-60,62-66,348-365
3b6v B:11-18,32-38,61-66,348-366
3b6v B:11-18,55-60,61-66,348-366
3b6v A:11-18,32-38,62-66,348-365
1t5c B:6-14,30-35,51-55,312-329
1t5c A:6-14,30-35,51-55,312-329
1t5c A:6-14,45-49,51-55,312-329
1t5c B:6-14,45-49,51-55,312-329
3bfn A:44-51,84-90,91-96,351-363
3k3b B:18-26,62-68,69-74,342-358
3k3b B:18-26,40-46,69-74,342-358
3k3b A:18-26,61-68,69-74,342-358
3l1c A:348-356,394-399,399-404,650-671
3l1c A:348-356,368-373,399-404,650-671
3l1c B:349-356,394-399,399-404,650-671
3hqd B:19-26,62-68,69-74,342-359
3hqd A:19-26,62-68,69-74,342-359
2x7c A:19-26,59-68,69-74,342-359
2x7c A:19-26,40-46,69-74,342-359
2x7c B:19-26,61-68,69-74,342-359
3dc4 A:7-16,45-50,51-56,303-324
3dcb A:6-16,45-50,51-56,300-321
2wog B:19-26,62-68,69-74,342-360
2wog C:18-26,62-68,69-74,342-358
2wog A:19-26,62-68,69-74,342-360
3lxy A:6-14,28-32,32-40,311-329
2y5w B:13-20,50-55,56-61,316-333
2y5w A:13-20,34-38,56-61,316-333
2y5w A:13-20,51-55,56-61,316-333
2gry A:196-204,238-249,250-255,506-523
2gry A:196-204,218-223,250-255,506-523
3lre B:12-19,71-76,77-82,338-355
3lre A:12-19,71-76,77-82,338-353
3lre B:12-19,33-38,77-82,338-355
3lre A:12-19,33-38,77-82,338-353
3dco N:7-16,45-50,51-56,303-324
2heh A:258-266,280-285,312-317,571-587
2heh A:258-266,300-312,312-317,571-587
2y65 A:13-20,50-55,56-61,316-333
2y65 D:13-20,51-55,56-61,316-333
2y65 B:13-20,50-55,56-61,314-333
2y65 C:13-20,51-55,56-61,316-333
3nwn A:6-14,51-57,58-62,323-340
3nwn A:6-14,23-27,58-62,323-340
3ezs A:21-28,309-317,328-334,356-372
3ezs B:21-28,309-317,328-334,356-374
2x2r B:19-26,62-68,69-74,342-360
2x2r A:19-26,62-68,69-74,342-360
2x2r C:19-26,62-68,69-74,342-358
2x2r C:19-26,40-46,69-74,342-358
2vvg A:6-13,55-60,61-66,318-336
2vvg B:6-13,27-33,61-66,318-335
2vvg B:6-13,55-60,61-66,318-335
2vvg A:6-13,27-33,61-66,318-336
2hxh C:5-14,27-32,53-59,337-352
2hxh C:5-14,47-52,53-59,337-352
2p4n K:8-16,43-48,49-54,308-323