1. d.58.1 4Fe-4S ferredoxins
Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
1dur d1dura_ A:1-5,12-19,22-26,50-54
1rgv d1rgva_ A:1-5,12-19,22-26,57-61
1vjw d1vjwa_ A:2-6,14-21,23-28,55-59
1f2g d1f2ga_ A:1-5,12-19,21-25,54-58
1jb0 d1jb0c_ C:1-9,14-21,24-30,63-69
1f5c d1f5ca_ A:1-5,14-21,24-29,53-57
1fxd d1fxda_ A:1-5,12-19,21-25,54-58
2fdn d2fdna_ A:1-5,12-19,22-27,51-55
1fxr d1fxra_ A:3-7,15-22,24-29,58-62
1fca d1fcaa_ A:1-5,12-19,22-27,51-55
1fxr d1fxrb_ B:3-7,15-22,24-30,58-62
1fdn d1fdna_ A:1-5,12-19,22-27,51-55
1wtf d1wtfd1 D:2-7,15-22,24-29,65-70
1wtf d1wtfb1 B:2-7,15-22,24-29,65-70
1wtf d1wtfa1 A:2-7,15-22,24-29,65-70
1wtf d1wtfc1 C:2-7,15-22,24-29,65-70
1iqz d1iqza_ A:2-7,15-22,24-29,65-70
1ir0 d1ir0a_ A:2-7,15-22,24-29,65-70
1sj1 d1sj1a_ A:1-7,15-22,24-29,60-66
1sj1 d1sj1b_ B:1-7,15-22,24-29,60-66
1siz d1siza_ A:1-7,15-22,24-29,60-66
1siz d1sizc_ C:1-7,15-22,24-29,60-66
2gmh d2gmha3 A:503-507,522-529,532-538,567-571
2gmj d2gmja3 A:503-507,522-529,532-538,567-571
2gmh d2gmhb3 B:503-507,522-529,532-538,567-571
1gt8 d1gt8c5 C:943-949,957-967,970-976,1001-1007
1h0h d1h0hl_ L:2-8,15-26,50-60,160-165
2. i.5.1 Photosystems
Photosystems
1qzv d1qzvr_ R:2-10,15-22,25-31,64-70
1qzv d1qzvc_ C:2-10,15-22,25-31,64-70
3. e.52.1 NAD kinase/diacylglycerol kinase-like
NAD kinase/diacylglycerol kinase-like 2 domains: d1 [alpha/beta; related to the PFK N-terminal domain (scop_sf 53784)]; d2 [all-beta; atypical beta-sandwich made of 4 structural repeats of beta(3) unit]
2p1r d2p1rb1 B:137-143,160-171,171-176,192-200
2p1r d2p1ra1 A:137-143,160-171,171-176,192-200
2bon d2bona1 A:137-143,159-171,171-176,192-200
4. d.16.1 FAD-linked reductases, C-terminal domain N-terminal domain is beta/beta/alpha common fold !
FAD-linked reductases, C-terminal domain alpha+beta sandwich
1foh d1fohd4 D:246-254,308-321,324-328,328-338
1foh d1fohc4 C:246-254,308-321,324-328,328-338
5. c.60.1 Phosphoglycerate mutase-like
Phosphoglycerate mutase-like core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 324156; strand 5 is antiparallel to the rest
3pgm d3pgma_ A:1-6,28-46,173-177,208-213
3pgm d3pgmb_ B:1-6,28-46,173-177,208-213
6. d.142.1 Glutathione synthetase ATP-binding domain-like
ATP-grasp Consists of two subdomains with different alpha+beta folds ! shares functional and structural similarities with the PIPK and protein kinase superfamilies
2hgs d2hgsa4 A:118-134,183-200,262-267,421-436
7. d.77.1 RL5-like
RL5-like beta-alpha-beta(2)-alpha-beta(3)-alpha; 2 layers, alpha/beta; antiparallel beta-sheet: order 231654
2i2v d2i2vf1 F:28-37,45-61,64-69,149-159
2i2t d2i2tf1 F:28-37,45-61,64-69,149-159
2qov d2qovf1 F:28-37,45-61,64-69,150-158
2z4n d2z4nf1 F:28-37,45-61,64-69,150-159
2qbg d2qbgf1 F:28-37,45-61,64-69,150-159
2qbe d2qbef1 F:28-37,45-61,64-69,150-159
8. e.1.1 Serpins
Serpins contains a cluster of helices and a beta-sandwich
2gd4 d2gd4c1 C:74-79,118-139,138-150,417-427
2gd4 d2gd4i1 I:74-79,118-139,138-150,417-427
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 123 (enumeration index: query73) of S4
2pa8 D:168-173,176-184,187-192,216-221
2y0s D:168-173,176-183,187-192,216-221
2y0s S:168-173,176-183,187-192,216-221
3kak B:146-161,210-227,290-296,444-461
3kak A:146-161,210-227,290-296,444-461
3hkz D:168-173,176-184,187-192,216-221
3hkz O:168-173,176-184,187-192,216-221
3kaj B:147-161,210-227,290-296,444-461
3kaj A:146-161,210-227,290-296,444-461
2z8q A:1-7,15-22,24-29,60-66
2z8q B:1-7,15-22,24-29,60-66
3kal B:146-161,210-227,290-296,444-461
3kal A:146-161,210-227,290-296,444-461
2fgo A:1-5,12-19,22-27,57-61
1wz2 A:175-188,266-277,436-444,456-469
1wz2 B:175-188,266-277,436-444,456-469
3nzk A:3-8,77-88,91-98,119-124
1yxa A:69-74,109-127,130-143,405-415
3f5n C:44-49,86-100,105-116,385-395
1w9z A:179-189,205-219,227-232,238-245
1w9z C:178-189,205-219,227-232,238-246
1w9z B:179-189,205-219,227-232,238-245
1gx7 A:27-31,38-45,49-54,80-84
2zvs B:1-5,12-19,22-27,57-61
2zvs C:1-5,12-19,22-27,57-61
2waq D:168-173,176-184,187-192,216-221
2vkr F:37-42,48-55,59-65,97-101
3pni A:1-7,15-22,24-29,60-66
3pni B:1-7,15-22,24-28,60-66
3pcq C:1-9,14-21,24-30,63-69
3sbu B:113-119,174-188,232-239,248-257
3sbu A:113-119,176-188,232-239,248-257
3pkm X:134-139,159-179,185-191,238-244
1wkb A:175-188,266-277,436-444,456-469
3iyx F:28-37,45-61,64-69,149-159
2wb1 D:168-173,176-183,187-192,216-221
2wb1 S:168-173,176-183,187-192,216-221
2pmz D:168-173,176-184,187-192,216-221
2pmz S:168-173,176-184,187-192,216-221
3exy A:1-5,12-19,22-27,57-61
3eun A:1-5,12-19,22-27,57-61
2wyo D:112-126,201-223,315-325,492-507