List of the counted superfamily hits for pattern ID: 2 (enumeration index: query1.2) of S5

List of the counted superfamily hits for pattern ID: 2 (enumeration index: query1.2) of S5

SCOP superfamily ID superfamiily description corresponding fold description
b.69.4WD40 repeat-like also contains 8-bladed propellers ! 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
d.153.1N-terminal nucleophile aminohydrolases (Ntn hydrolases) N-terminal residue provides two catalytic groups, nucleophile and proton donor ! Ntn hydrolase-like 4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
b.70.2C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 8-bladed beta-propeller consists of eight 4-stranded beta-sheet motifs; meander ! also found in some members of the WD40-repeat superfamily
b.69.3Nitrous oxide reductase, N-terminal domain 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
b.68.5YWTD domain 6-bladed beta-propeller consists of six 4-stranded beta-sheet motifs; meander
b.69.9Tricorn protease domain 2 distorted 7-bladed beta-propeller fold; possibly related to the N-terminal domain of tricorn protease (a 6-bladed beta-propeller) ! 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
b.69.2YVTN repeat-like/Quinoprotein amine dehydrogenase 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
b.69.8Integrin alpha N-terminal domain 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
b.70.1Quinoprotein alcohol dehydrogenase-like 8-bladed beta-propeller consists of eight 4-stranded beta-sheet motifs; meander ! also found in some members of the WD40-repeat superfamily
b.30.5Galactose mutarotase-like probable carbohydrate-binding domain in enzymes acting on sugars ! Supersandwich sandwich; 18 strands in 2 sheets
b.70.3DPP6 N-terminal domain-like 8-bladed beta-propeller consists of eight 4-stranded beta-sheet motifs; meander ! also found in some members of the WD40-repeat superfamily
b.69.1Galactose oxidase, central domain 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
b.76.1Outer surface protein 21 stranded sheet partly folded upon itself at the ends ! open-sided beta-meander single sheet formed by beta-hairpin repeats; exposed on both sides in the middle
d.96.2ApbE-like duplication: contains two differently decorated beta(2)-alpha(2)-beta(2) subdomains, similar to other T-fold domains; probably does not form the tunnel-shaped oligomers ! T-fold beta(2)-alpha(2)-beta(2); 2 layers: alpha/beta; antiparallel sheet 1234 ! tunnel-shaped: its known members form wide oligomeric barrels different sizes
b.69.6Clathrin heavy-chain terminal domain 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
b.69.103-carboxy-cis,cis-mucoante lactonizing enzyme 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
b.69.14Nucleoporin domain 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
b.68.9NHL repeat 6-bladed beta-propeller consists of six 4-stranded beta-sheet motifs; meander
b.126.1Adsorption protein p2 Adsorption protein p2 multisheet protein containing partial beta-propeller and beta-sandwich regions
b.68.4TolB, C-terminal domain 6-bladed beta-propeller consists of six 4-stranded beta-sheet motifs; meander
b.69.7Peptidase/esterase 'gauge' domain 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
b.68.3Thermostable phytase (3-phytase) 6-bladed beta-propeller consists of six 4-stranded beta-sheet motifs; meander
b.24.1Hyaluronate lyase-like, C-terminal domain Hyaluronate lyase-like, C-terminal domain sandwich, 10 strands in 2 sheets; "folded meander"
b.67.3Apyrase distorted propeller with an alpha helix inserted between the second and third blades ! 5-bladed beta-propeller consists of five 4-stranded beta-sheet motifs; meander
b.68.1Sialidases 6-bladed beta-propeller consists of six 4-stranded beta-sheet motifs; meander
b.68.6Calcium-dependent phosphotriesterase 6-bladed beta-propeller consists of six 4-stranded beta-sheet motifs; meander
b.68.8Fucose-specific lectin 6-bladed beta-propeller consists of six 4-stranded beta-sheet motifs; meander
b.84.3Duplicated hybrid motif half-barrel sheet of 8 strands sandwiched with two 3-stranded sheets ! Barrel-sandwich hybrid sandwich of half-barrel shaped beta-sheets
c.1.13Malate synthase G TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites
d.153.2Archaeal IMP cyclohydrolase PurO has a putative active site in the same topological location as the Ntn hydrolase but lacks the N-terminal nucleophile ! Ntn hydrolase-like 4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
b.68.2Soluble quinoprotein glucose dehydrogenase 6-bladed beta-propeller consists of six 4-stranded beta-sheet motifs; meander
b.68.7Tricorn protease N-terminal domain possibly related to the second domain of tricorn protease (a distorted 7-bladed beta-propeller) ! 6-bladed beta-propeller consists of six 4-stranded beta-sheet motifs; meander
b.69.13Oligoxyloglucan reducing end-specific cellobiohydrolase duplication: # two beta-propeller domains are swapped with the N-terminal strands; similar domain arrangment to the Actin interacting protein 1 (7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
b.67.2Arabinanase/levansucrase/invertase 5-bladed beta-propeller consists of five 4-stranded beta-sheet motifs; meander
b.69.11Putative isomerase YbhE 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
b.69.12Sema domain irregular 7-bladed beta-propeller with a large insertion in the fifth blade ! 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
b.25.1Osmotin, thaumatin-like protein has two smaller insertion domains ! Osmotin, thaumatin-like protein sandwich; 11 strands in 2 sheets
b.67.1Tachylectin-2 5-bladed beta-propeller consists of five 4-stranded beta-sheet motifs; meander
b.68.11Kelch motif 6-bladed beta-propeller consists of six 4-stranded beta-sheet motifs; meander
d.36.1Chalcone isomerase Chalcone isomerase beta(3)-alpha(2)-beta-alpha(2)-beta3; 2 layers alpha/beta; antiparallel sheet: order 1234567
b.88.1Mss4-like duplication: tandem repeat of two similar structural motifs ! Mss4-like complex fold made of several coiled beta-sheets
b.92.1Composite domain of metallo-dependent hydrolases this domain is interrupted by the catalytic beta/alpha barrel domain ! Composite domain of metallo-dependent hydrolases pseudobarrel; mixed sheet of 7 strand folded upon itself and "buckled" by two beta-turns
b.30.2Amine oxidase catalytic domain Supersandwich sandwich; 18 strands in 2 sheets
b.149.1Beta-galactosidase LacA, domain 3 Beta-galactosidase LacA, domain 3 sandwich; 8 strands in 2 sheets
b.27.1Soluble secreted chemokine inhibitor, VCCI Soluble secreted chemokine inhibitor, VCCI sandwich; 11 strands in 2 sheets; greek-key
d.62.1Pepsin inhibitor-3 Pepsin inhibitor-3 duplication of beta(3)-alpha(2) motif: meander beta sheets form barrel-like structure
d.219.1PP2C-like contain binuclear metal (Mn) centre ! PP2C-like 4 layers: alpha/beta/beta/alpha; antiparallel beta sheets
b.30.6V-region of surface antigen I/II (SA I/II, PAC) Supersandwich sandwich; 18 strands in 2 sheets
b.97.1Cytolysin/lectin some topological similarity to osmotin ! Cytolysin/lectin sandwich, 10 strands in 2 sheets;
b.42.2Ricin B-like lectins beta-Trefoil barrel, closed; n=6, S=12; and a hairpin triplet; meander ! duplication: has internal pseudo threefold symmetry
b.153.1PheT/TilS domain contains putative tRNA-binding structural motif ! PheT/TilS domain core: 3 layers; contains beta-sandwich of unusual topology
b.176.1AttH-like AttH-like duplication: two flattened beta-barrels of lipocalin-like topology are orthogonally packed with a pseudo twofold symmetry
b.1.22ASF1-like contains extra C-terminal strand ! Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
d.383.1PG1388-like PG1388-like consists of 2 alpha+beta subdomains, each having a meander beta-sheet; d1: alpha(2)-beta(7); d2: alpha(2)-beta(2)-alpha(2)-beta(2)
f.4.3Porins Transmembrane beta-barrels not a true fold, gathers together transmembrane barrels of different (n,S)
e.43.1Subunits of heterodimeric actin filament capping protein Capz Subunits of heterodimeric actin filament capping protein Capz 3 domains: (1) protozoan pheromone-like alpha-helical bundle; (2) rubredoxin-like domain lacking metal-binding site; (3) alpha+beta heterodimerisation domain: alpha-beta(5)-alpha
f.6.1Leukocidin-like Leukocidin-like subunit fold contains beta-sandwich of Ig-like (grerk-key) topology and a beta-ribbon arm that forms an oligomeric transmembrane barrel
f.9.1Perfringolysin Perfringolysin 2 domains: (1) alpha+beta; (2) all-beta, similar to the CalB domain fold but the two last strands are transposed