List of the counted superfamily hits for pattern ID: 639 (enumeration index: query1064.1072.2368) of S5

List of the counted superfamily hits for pattern ID: 639 (enumeration index: query1064.1072.2368) of S5

SCOP superfamily ID superfamiily description corresponding fold description
d.328.1CorA soluble domain-like CorA soluble domain-like beta(2)-alpha-beta-alpha(2)-beta(4)-alpha(3); 3 layers: a/b/a; mixed beta-sheet, order 2137654; strands 3 and 7 are parallel
d.89.1Origin of replication-binding domain, RBD-like Origin of replication-binding domain, RBD-like alpha-beta-alpha-beta(2)-alpha-beta-alpha-beta; 3 layers: a/b/a; antiparallel sheet 41325
c.90.1Tetrapyrrole methylase Tetrapyrrole methylase consists of two non-similar domains ! Domain 1 has parallel sheet of 5 strands, order 32415 ! Domain 2 has mixed sheet of 5 strands, order 12534; strands 4 & 5 are antiparallel to the rest
d.58.59Rnp2-like contains extra C-terminal helixFerredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
d.58.29Nucleotide cyclase common fold is elaborated with additional secondary structures ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
b.57.1Herpes virus serine proteinase, assemblin Herpes virus serine proteinase, assemblin core: barrel, closed; n=7, S=8; complex topology
d.58.6Nucleoside diphosphate kinase, NDK Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
d.100.1L9 N-domain-like MbtH/L9 domain-like beta(2)-alpha-beta-alpha; 3 layers: alpha/beta/alpha
d.58.56CcmK-like contains extra C-terminal helix; forms compact hexameric 'tiles' of hexagonal shape ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
d.58.39Glutamyl tRNA-reductase catalytic, N-terminal domain common fold is elaborated with additional secondary structures ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
c.132.1Bacterial fluorinating enzyme, N-terminal domain Bacterial fluorinating enzyme, N-terminal domain 3 layers: a/b/a; mixed beta-sheet of 6 strands; order: 213546, strand 5 is antiparallel to the rest; topological similarity to the MogA-like family fold
d.58.55DOPA-like probable biological unit is homodimer; the extra C-terminal strand, adjacent and antiparallel to strand 4, contributes to the dimerisation interface ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
d.310.1VC0467-like VC0467-like complex fold; contains bifurcated beta-sheet structure folded into pseudo barrel
d.356.1SP0830-like SP0830-like duplication: two beta-alpha-beta(2)-alpha-beta-alpha motifs are organized in ferredoxin-like subdomains swapped with the extra C-terminal helices
b.43.2FucI/AraA C-terminal domain-like Reductase/isomerase/elongation factor common domain barrel, closed; n=6, S=10; greek-key
d.226.1GIY-YIG endonuclease GIY-YIG endonuclease beta(2)-alpha(2)-beta-alpha-(beta); strand 4 is very short; 3 layers; antiparallel (mixed) beta-sheet; order 312(4)
c.8.3Carbamoyl phosphate synthetase, small subunit N-terminal domain The "swivelling" beta/beta/alpha domain 3 layers: b/b/a; the central sheet is parallel, and the other one is antiparallel; there are some variations in topology ! this domain is thought to be mobile in most multi-domain proteins known to contain it
b.40.5Inorganic pyrophosphatase OB-fold barrel, closed or partly opened n=5, S=10 or S=8; greek-key